Psyllid ID: psy12288
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 393 | 2.2.26 [Sep-21-2011] | |||||||
| Q45FA5 | 426 | Serine/threonine-protein | N/A | N/A | 0.949 | 0.875 | 0.432 | 7e-85 | |
| Q96SB4 | 655 | SRSF protein kinase 1 OS= | yes | N/A | 0.458 | 0.274 | 0.595 | 1e-63 | |
| Q5RD27 | 655 | SRSF protein kinase 1 OS= | yes | N/A | 0.458 | 0.274 | 0.595 | 1e-63 | |
| O54781 | 681 | SRSF protein kinase 2 OS= | yes | N/A | 0.491 | 0.283 | 0.582 | 1e-62 | |
| P78362 | 688 | SRSF protein kinase 2 OS= | no | N/A | 0.491 | 0.280 | 0.577 | 2e-62 | |
| O70551 | 648 | SRSF protein kinase 1 OS= | no | N/A | 0.437 | 0.265 | 0.601 | 1e-61 | |
| Q9Z0G2 | 565 | SRSF protein kinase 3 OS= | no | N/A | 0.440 | 0.306 | 0.626 | 1e-61 | |
| Q9UPE1 | 567 | SRSF protein kinase 3 OS= | no | N/A | 0.440 | 0.305 | 0.626 | 2e-61 | |
| B8Y466 | 566 | SRSF protein kinase 3 OS= | no | N/A | 0.440 | 0.305 | 0.626 | 9e-61 | |
| Q03563 | 1003 | Serine/threonine-protein | yes | N/A | 0.513 | 0.201 | 0.528 | 9e-59 |
| >sp|Q45FA5|SRPK_PHYPO Serine/threonine-protein kinase SRPK OS=Physarum polycephalum PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 314 bits (805), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/405 (43%), Positives = 245/405 (60%), Gaps = 32/405 (7%)
Query: 2 LFDQQESYME-YRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTF-VALK 59
LFD ++ E Y+ GGY PV++G+++ Y +++KLGWGHFSTVWL+ D ++ VALK
Sbjct: 27 LFDSEDEGTEDYKKGGYHPVKVGEVYKSNYRIVKKLGWGHFSTVWLAIDEKNGGREVALK 86
Query: 60 IVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICM 119
IVKS Y + A DEI LL+ + S + ++ V++LL+ F +G HICM
Sbjct: 87 IVKSASHYREAAEDEIHLLQTI--------SEGDPESKYCVVKLLDSFLHTGPHGKHICM 138
Query: 120 VFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179
VFE +G NLL LI +YKGI + V+ + KQ+L GL+YLHT+C+IIHTD+KPEN+L+
Sbjct: 139 VFEKLGSNLLDLIKLHNYKGIPLPLVKCMTKQILIGLDYLHTKCKIIHTDLKPENVLL-- 196
Query: 180 DYDKVRR---MARDATKHHKIGMKLPMSLDS-----TMSDFSLLDPANEVYDI------- 224
D + R + D P+S D+ T S +P+ + D
Sbjct: 197 --DHLLRPDTLNWDDQFLDGASSSSPISNDAENARQTRSGKIKWEPSARIADSLSRKIVK 254
Query: 225 --SVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDY 282
VKIADLG ACW HF D++QTRQYR EV++G + D+WS ACM FELATGD
Sbjct: 255 VPIVKIADLGTACWTHKHFTDDVQTRQYRCPEVILGQKWDTTIDMWSLACMVFELATGDL 314
Query: 283 LFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP-WGL 341
LF PK G +Y + DDHLA ++EL+G +P+ +++G K+ +YF +G + I L P WG+
Sbjct: 315 LFCPKKGDKYDKTDDHLALMIELLGRMPRSFITKGSKSEKYFNSKGELKYIRKLGPQWGM 374
Query: 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
VL EKY + K EA + FLLPML + RA+A D L HP++
Sbjct: 375 SDVLYEKYRFPKEEADKLSAFLLPMLQYEPEKRATARDSLEHPYM 419
|
Phosphorylates serine/arginine-rich protein PSR. Physarum polycephalum (taxid: 5791) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q96SB4|SRPK1_HUMAN SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 144/183 (78%), Gaps = 3/183 (1%)
Query: 207 STMSDF--SLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
ST +F + L+P N + VKIADLGNACW+ HF ++IQTRQYRS+EVLIG+GY
Sbjct: 473 STAGNFLVNPLEPKN-AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 531
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+EL+G +P++++ GK + +F
Sbjct: 532 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 591
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
T +G+ + I LKPWGL++VL EKY WS+ EA+ F DFLLPML + + RA+AA+CLRHP
Sbjct: 592 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 651
Query: 385 WLN 387
WLN
Sbjct: 652 WLN 654
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Isoform 2 phosphorylates SFRS2, ZRSR2, LBR and PRM1. Isoform 2 phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Isoform 2 can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Isoform 1 and isoform 2 can induce splicing of exon 10 in MAPT/TAU. The ratio of isoform 1/isoform 2 plays a decisive role in determining cell fate in K562 leukaemic cell line: isoform 2 favors proliferation where as isoform 1 favors differentiation. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q5RD27|SRPK1_PONAB SRSF protein kinase 1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 144/183 (78%), Gaps = 3/183 (1%)
Query: 207 STMSDF--SLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
ST +F + L+P N + VKIADLGNACW+ HF ++IQTRQYRS+EVLIG+GY
Sbjct: 473 STAGNFLVNPLEPKN-AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 531
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+EL+G +P++++ GK + +F
Sbjct: 532 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 591
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
T +G+ + I LKPWGL++VL EKY WS+ EA+ F DFLLPML + + RA+AA+CLRHP
Sbjct: 592 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 651
Query: 385 WLN 387
WLN
Sbjct: 652 WLN 654
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O54781|SRPK2_MOUSE SRSF protein kinase 2 OS=Mus musculus GN=Srpk2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 152/199 (76%), Gaps = 6/199 (3%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 53 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 112
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ + V++L++DFKI NG H+CMVFEV
Sbjct: 113 AQHYTETALDEIKLLKCV-RESDPSDPNKDM-----VVQLIDDFKISGMNGIHVCMVFEV 166
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ ++ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 167 LGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 226
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 227 VRRMAAEATEWQKAGAPPP 245
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P78362|SRPK2_HUMAN SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 150/199 (75%), Gaps = 6/199 (3%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 55 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 114
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V S + + V++L++DFKI NG H+CMVFEV
Sbjct: 115 AQHYTETALDEIKLLKCV------RESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEV 168
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ ++ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 169 LGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 228
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 229 VRRMAAEATEWQKAGAPPP 247
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28. Can mediate hepatitis B virus (HBV) core protein phosphorylation. Plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O70551|SRPK1_MOUSE SRSF protein kinase 1 OS=Mus musculus GN=Srpk1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 215 LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274
L+P N + VKIADLGNACW+ HF ++IQTRQYRS+EVLIG+GY ADIWSTACMA
Sbjct: 476 LEPKN-AEKLQVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMA 534
Query: 275 FELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334
FELATGDYLF+P +G++Y+RD+DH+A I+EL+G +P++++ GK + +FT +G+ + I
Sbjct: 535 FELATGDYLFEPHSGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 594
Query: 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
LKPWGL +VL EKY W + EA+ F DFLLPML + + RA+AA+CLRHPWLN
Sbjct: 595 KLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLN 647
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9Z0G2|SRPK3_MOUSE SRSF protein kinase 3 OS=Mus musculus GN=Srpk3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 215 LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274
L+P N I +KIADLGNACW+ HF ++IQTRQYR+VEVLIGA YGP ADIWSTACMA
Sbjct: 393 LEPQN-ADKIKIKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMA 451
Query: 275 FELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334
FELATGDYLF+P +G++YSRD+DH+AHIVEL+G IP G+ + +F +G R I
Sbjct: 452 FELATGDYLFEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIP 511
Query: 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
NLK WGLY+VL EKY W +A+ F+ FLLPM+ + RASAADCL+HPWLNP
Sbjct: 512 NLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLNP 565
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9UPE1|SRPK3_HUMAN SRSF protein kinase 3 OS=Homo sapiens GN=SRPK3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 215 LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274
L+P N I +KIADLGNACW+ HF ++IQTRQYR+VEVLIGA YGP ADIWSTACMA
Sbjct: 395 LEPQN-ADKIKIKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMA 453
Query: 275 FELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334
FELATGDYLF+P +G++YSRD+DH+AHIVEL+G IP G+ + +F +G R I
Sbjct: 454 FELATGDYLFEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIH 513
Query: 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
NLK WGLY+VL EKY W +A+ F+ FLLPM+ + RASAADCL+HPWLNP
Sbjct: 514 NLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLNP 567
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|B8Y466|SRPK3_PIG SRSF protein kinase 3 OS=Sus scrofa GN=SRPK3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (597), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 215 LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274
L+P N I +KIADLGNACW+ HF + IQTRQYR+VEVLIGA YGP ADIWSTACMA
Sbjct: 394 LEPQN-ADKIRIKIADLGNACWVHKHFTEGIQTRQYRAVEVLIGAEYGPPADIWSTACMA 452
Query: 275 FELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334
FELATGDYLF+P +G++YSRD+DH+AHIVEL+G IP G+ + +F +G R I
Sbjct: 453 FELATGDYLFEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIH 512
Query: 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
NLK WGLY+VL EKY W +A+ F+ FLLPM+ + RASAADCL+HPWLNP
Sbjct: 513 NLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLNP 566
|
Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development. Sus scrofa (taxid: 9823) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q03563|SPK1_CAEEL Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 227 bits (579), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 147/208 (70%), Gaps = 6/208 (2%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y+ GGY PV IGD+FN RYHVIRKLGWGHFSTVWL+WD QDK FVA+KIVKS
Sbjct: 396 EEQEDPRDYKRGGYHPVNIGDVFNARYHVIRKLGWGHFSTVWLAWDTQDKRFVAMKIVKS 455
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
+ Y + A DEI LL +V S+ N KV++LL++F + NG H+ MVFEV
Sbjct: 456 AEHYTEAALDEIKLLLSV------RSADPNDIGCHKVVQLLDEFTVTGINGQHVAMVFEV 509
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G NLL+LI RS+Y+G+H++ VR I +QVLE L Y+H +C IIHTDIKPEN+L+ + ++
Sbjct: 510 LGCNLLKLIIRSNYRGLHLEQVRKICRQVLEALGYMHEKCGIIHTDIKPENVLITMSREE 569
Query: 184 VRRMARDATKHHKIGMKLPMSLDSTMSD 211
++ MA+ A K+ MK+ S ST D
Sbjct: 570 IKIMAQHAVVARKMNMKMSGSAVSTAPD 597
|
Required for embryogenesis and germline development in both adult hermaphrodites and males. SR-protein kinase (SRPK) that binds directly to and phosphorylates the RS domain of rsp-3/CeSF2 in vitro. Caenorhabditis elegans (taxid: 6239) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 393 | ||||||
| 82407376 | 397 | Chain A, Srpk1 Bound To 9mer Docking Mot | 0.959 | 0.949 | 0.572 | 1e-128 | |
| 294662293 | 389 | Chain A, Structure Of Human Serine-Argin | 0.959 | 0.969 | 0.583 | 1e-126 | |
| 253722636 | 381 | Chain A, Crystal Structure Of Sr Protein | 0.941 | 0.971 | 0.575 | 1e-126 | |
| 444517325 | 435 | Serine/threonine-protein kinase SRPK3 [T | 0.956 | 0.864 | 0.504 | 1e-116 | |
| 432859874 | 451 | PREDICTED: SRSF protein kinase 2-like [O | 0.951 | 0.829 | 0.506 | 1e-110 | |
| 195551971 | 367 | GD15416 [Drosophila simulans] gi|1942019 | 0.890 | 0.953 | 0.545 | 1e-110 | |
| 195361407 | 367 | GM16236 [Drosophila sechellia] gi|194127 | 0.890 | 0.953 | 0.542 | 1e-108 | |
| 195364976 | 367 | GM16893 [Drosophila sechellia] gi|194133 | 0.890 | 0.953 | 0.537 | 1e-108 | |
| 328721030 | 466 | PREDICTED: serine/threonine-protein kina | 0.944 | 0.796 | 0.467 | 1e-107 | |
| 328721028 | 535 | PREDICTED: serine/threonine-protein kina | 0.944 | 0.693 | 0.467 | 1e-107 |
| >gi|82407376|pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide gi|112489691|pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1 | Back alignment and taxonomy information |
|---|
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/391 (57%), Positives = 295/391 (75%), Gaps = 14/391 (3%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
D+QE +Y GGY V+IGDLFN RYHVIRKLGWGHFSTVWLSWD+Q K FVA+K+VKS
Sbjct: 13 DEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS 72
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
+ Y +TA DEI LLK+V +S N E V++LL+DFKI NGTHICMVFEV
Sbjct: 73 AEHYTETALDEIRLLKSV------RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEV 126
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ + V+ II+QVL+GL+YLHT+CRIIHTDIKPENIL+ V+
Sbjct: 127 LGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQY 186
Query: 184 VRRMARDATKHHKIGMKLPM-----SLDSTMSDFSL--LDPANEVYDISVKIADLGNACW 236
+RR+A +AT+ + G P + +T +F + L+P N + VKIADLGNACW
Sbjct: 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKN-AEKLKVKIADLGNACW 245
Query: 237 IDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDD 296
+ HF ++IQTRQYRS+EVLIG+GY ADIWSTACMAFELATGDYLF+P +G+EY+RD+
Sbjct: 246 VHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDE 305
Query: 297 DHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEA 356
DH+A I+EL+G +P++++ GK + +FT +G+ + I LKPWGL++VL EKY WS+ EA
Sbjct: 306 DHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEA 365
Query: 357 SDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
+ F DFLLPML + + RA+AA+CLRHPWLN
Sbjct: 366 AGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|294662293|pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B | Back alignment and taxonomy information |
|---|
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/389 (58%), Positives = 287/389 (73%), Gaps = 12/389 (3%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 7 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 66
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ + + V++L++DFKI NG H+CMVFEV
Sbjct: 67 AQHYTETALDEIKLLKCV-RESDP-----SDPNKDMVVQLIDDFKISGMNGIHVCMVFEV 120
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ ++ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 121 LGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 180
Query: 184 VRRMARDATKHHKIGMKLPM-SLDSTMSDFSLL----DPANEVYDISVKIADLGNACWID 238
VRRMA +AT+ K G P S ST LL DP N I VKIADLGNACW+
Sbjct: 181 VRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRN-ADKIRVKIADLGNACWVH 239
Query: 239 DHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDH 298
HF ++IQTRQYRS+EVLIGAGY ADIWSTACMAFELATGDYLF+P +G++YSRD+DH
Sbjct: 240 KHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDH 299
Query: 299 LAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASD 358
+AHI+EL+G IP+ GK + +F +G R I LKPW L+ VL EKY W +A+
Sbjct: 300 IAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQ 359
Query: 359 FADFLLPMLHVNQKLRASAADCLRHPWLN 387
F DFL+PML + + RASA +CLRHPWLN
Sbjct: 360 FTDFLIPMLEMVPEKRASAGECLRHPWLN 388
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|253722636|pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 | Back alignment and taxonomy information |
|---|
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/384 (57%), Positives = 291/384 (75%), Gaps = 14/384 (3%)
Query: 11 EYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT 70
+Y GGY V+IGDLFN RYHVIRKLGWGHFSTVWLSWD+Q K FVA+K+VKS + Y +T
Sbjct: 4 DYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET 63
Query: 71 ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR 130
A DEI LLK+V +S N E V++LL+DFKI NGTHICMVFEV+G++LL+
Sbjct: 64 ALDEIRLLKSV------RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLK 117
Query: 131 LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190
I +S+Y+G+ + V+ II+QVL+GL+YLHT+CRIIHTDIKPENIL+ V+ +RR+A +
Sbjct: 118 WIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAE 177
Query: 191 ATKHHKIGMKLPM-----SLDSTMSDFSL--LDPANEVYDISVKIADLGNACWIDDHFAD 243
AT+ + G P + +T +F + L+P N + VKIADLGNACW+ HF +
Sbjct: 178 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKN-AEKLKVKIADLGNACWVHKHFTE 236
Query: 244 EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+IQTRQYRS+EVLIG+GY ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+
Sbjct: 237 DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 296
Query: 304 ELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFL 363
EL+G +P++++ GK + +FT +G+ + I LKPWGL++VL EKY WS+ EA+ F DFL
Sbjct: 297 ELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFL 356
Query: 364 LPMLHVNQKLRASAADCLRHPWLN 387
LPML + + RA+AA+CLRHPWLN
Sbjct: 357 LPMLELIPEKRATAAECLRHPWLN 380
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|444517325|gb|ELV11499.1| Serine/threonine-protein kinase SRPK3 [Tupaia chinensis] | Back alignment and taxonomy information |
|---|
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/434 (50%), Positives = 280/434 (64%), Gaps = 58/434 (13%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQD----------- 52
++QE +Y GGY PV+IGDLFN RYHV+RKLGWGHFSTVWL WD++
Sbjct: 11 EEQEDPKDYCKGGYYPVRIGDLFNGRYHVVRKLGWGHFSTVWLCWDIRATSQRGSGHCRR 70
Query: 53 KTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112
K FVALK+VKS Y +TA DEI LLK V S + E +++L++DF+I
Sbjct: 71 KRFVALKVVKSAGHYTETAVDEIKLLKCV------RDSDPSDPKRETIVQLIDDFRISGV 124
Query: 113 NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172
NG H+CMV EV+G+ LL+ I +S+Y+G+ + V++I++QVL GL+YLHT+C+IIHTDIKP
Sbjct: 125 NGVHVCMVLEVLGHQLLKWIIKSNYQGLPVPCVKSIVRQVLRGLDYLHTKCKIIHTDIKP 184
Query: 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFS------------------- 213
ENIL+CV +RR+A +AT G +S S S FS
Sbjct: 185 ENILLCVGDTYIRRLAAEATAP---GGDRSLSPGSQTSGFSGSLFSATSCSVLSGSSNQR 241
Query: 214 ----LLDPA---------------NEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
LL P+ I +KIADLGNACW+ HF ++IQTRQYR+VE
Sbjct: 242 ETGGLLSPSAPFGASNLLVNPLEPQNADKIKIKIADLGNACWVHKHFTEDIQTRQYRAVE 301
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
VLIGA YGP ADIWSTACMAFELATGDYLF+P +G++YSRD+DH+AHIVEL+G IP
Sbjct: 302 VLIGAEYGPPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIVELLGDIPPAFA 361
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
G+ + +F +G R I NLK WGLY+VL EKY W +A+ F+ FLLPM+ + R
Sbjct: 362 LSGRYSREFFNRRGELRHIHNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYLPEKR 421
Query: 375 ASAADCLRHPWLNP 388
ASAADCL+HPWLNP
Sbjct: 422 ASAADCLQHPWLNP 435
|
Source: Tupaia chinensis Species: Tupaia chinensis Genus: Tupaia Family: Tupaiidae Order: Scandentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|432859874|ref|XP_004069279.1| PREDICTED: SRSF protein kinase 2-like [Oryzias latipes] | Back alignment and taxonomy information |
|---|
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/397 (50%), Positives = 271/397 (68%), Gaps = 23/397 (5%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
+QQE+ +Y GGY PV+IG++F RY V +KLGWGHFSTVWL WD+ K FVALK+VKS
Sbjct: 62 EQQENPADYGVGGYYPVEIGEVFANRYQVQQKLGWGHFSTVWLCWDVMTKGFVALKVVKS 121
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
+ +TA DEI LLK V R S+ S ++V+RL++DF+I G H+CMV EV
Sbjct: 122 APTFTETALDEIKLLKCV-RDSDPKDSN-----RDRVVRLVDDFRINGSTGEHVCMVLEV 175
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G LLR I +S+Y G+ + V++I++QVL+GL+YLHT+C+IIHTDIKPENIL+ D
Sbjct: 176 LGDQLLRWIIKSNYTGLPLACVKSILRQVLQGLDYLHTKCKIIHTDIKPENILLRADDAF 235
Query: 184 VRRMARDA-------TKHHKIGM------KLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
+ ++A A + H + K P ++D D LL A I +KIAD
Sbjct: 236 IEKLAPKAHLWKPPVSPSHTNSVDRASRKKQPDAIDP---DVDLLK-AKSAEKILIKIAD 291
Query: 231 LGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGK 290
LGNACW+ HF ++IQT QYRSVEVLIGAGY ADIWSTACMAFELATGD+LFDP++G
Sbjct: 292 LGNACWVHKHFTEDIQTCQYRSVEVLIGAGYDTPADIWSTACMAFELATGDFLFDPQSGV 351
Query: 291 EYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYH 350
++R++DH+AHI+EL+GP+P + + G+ + +YF +G R I LKPW L ++L +KY
Sbjct: 352 RFTREEDHIAHIIELLGPLPSQFVQSGRHSKQYFNRKGQLRHISKLKPWSLLEILLDKYE 411
Query: 351 WSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
W + E FA FLLPML + + RA+A+ CL+HPWL
Sbjct: 412 WRREEGVQFASFLLPMLELLPQKRATASQCLKHPWLT 448
|
Source: Oryzias latipes Species: Oryzias latipes Genus: Oryzias Family: Adrianichthyidae Order: Beloniformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
| >gi|195551971|ref|XP_002076337.1| GD15416 [Drosophila simulans] gi|194201986|gb|EDX15562.1| GD15416 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 252/363 (69%), Gaps = 13/363 (3%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RYHV RKLGWGHFSTVWL WDLQ +VA+KI+KS +A+T DEI +LK V
Sbjct: 12 RYHVRRKLGWGHFSTVWLCWDLQAMRYVAIKILKSAPHFAET--DEIKILK------TVR 63
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ + K +++L+DFKI NGTHIC+VFEV+G NLL+LI +S+ +GI + NV+ I
Sbjct: 64 ETDPSNPRRRKTVQMLDDFKITGVNGTHICIVFEVLGDNLLKLIQKSNLRGIPLANVKAI 123
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH-----HKIGMKLPM 203
+QVLEGL+YLHT C+IIHTDIKPEN+L+CVD VR + + T H I L
Sbjct: 124 TRQVLEGLDYLHTCCQIIHTDIKPENVLLCVDEPHVRSRSVENTSSATNGAHSISTLLTP 183
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
++ DPA E + VKIADLGNACW+D H + IQTRQYRS+EV+IGAGY
Sbjct: 184 PPPPQAKHKAIQDPALEECKVKVKIADLGNACWVDHHLTEAIQTRQYRSLEVIIGAGYNT 243
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
+ADIWSTACM FELATGDYLF+P +G+ Y+R++DHLAHI+EL+GPIP+ +L G +
Sbjct: 244 SADIWSTACMVFELATGDYLFEPHSGESYTRNEDHLAHIIELLGPIPRNILLNGTYAAKS 303
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
FT R I LKPWGL VL EKY WS+ +A+ FA FL PML ++ RA+AA+CL+H
Sbjct: 304 FTRSCELRNISGLKPWGLMDVLLEKYEWSQKDAASFASFLKPMLELDPNKRATAAECLQH 363
Query: 384 PWL 386
PWL
Sbjct: 364 PWL 366
|
Source: Drosophila simulans Species: Drosophila simulans Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195361407|ref|XP_002045489.1| GM16236 [Drosophila sechellia] gi|194127722|gb|EDW49765.1| GM16236 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 252/363 (69%), Gaps = 13/363 (3%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RYHV RKLG GHFSTVWL WDLQ +VA+KI+KS +A+T DEI +LK V
Sbjct: 12 RYHVKRKLGCGHFSTVWLCWDLQAMRYVAIKILKSAPHFAET--DEIKILKTV------R 63
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ + K +++L+DFKI NGTHIC+VFEV+G NLL+LI +S+++GI + NV+ I
Sbjct: 64 ETDPSNPRRRKTVQMLDDFKITGVNGTHICIVFEVLGDNLLKLIQKSNFRGIPLANVKAI 123
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG-----MKLPM 203
+QVLEGL+YLHT C+IIHTDIKPEN+L+CVD VR + + T G
Sbjct: 124 TRQVLEGLDYLHTCCQIIHTDIKPENVLLCVDEPHVRSRSVENTSSATNGPHWNPTLPTP 183
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
S D + DPA E ++VKIADLGNACW+D H IQTRQYRS+EV+IGAGY
Sbjct: 184 SPPPQAKDTAKQDPALEECRVNVKIADLGNACWVDHHLTKTIQTRQYRSLEVIIGAGYNT 243
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
+ADIWSTACM FELATGDYLF+P +G+ Y+R++DHLAHI+EL+GPIP+ +L G + +
Sbjct: 244 SADIWSTACMVFELATGDYLFEPHSGESYTRNEDHLAHIIELLGPIPRNILLNGTYSAKS 303
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
FT R I LKPWGL VL EKY WS+ +A+ FA FL PML ++ RA+AA+CL+H
Sbjct: 304 FTRSCELRNISGLKPWGLMDVLLEKYEWSQKDAASFASFLKPMLELDPNKRATAAECLQH 363
Query: 384 PWL 386
PWL
Sbjct: 364 PWL 366
|
Source: Drosophila sechellia Species: Drosophila sechellia Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195364976|ref|XP_002045635.1| GM16893 [Drosophila sechellia] gi|194133117|gb|EDW54669.1| GM16893 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/363 (53%), Positives = 251/363 (69%), Gaps = 13/363 (3%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RYHV RKLG GHFSTVWL WDLQ +VA+KI+KS +A+T DEI +LK V
Sbjct: 12 RYHVKRKLGCGHFSTVWLCWDLQAMRYVAIKILKSAPHFAET--DEIKILKTV------R 63
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ + K +++L+DFKI NGTHIC+VFEV+G NLL+LI +S+++GI + NV+ +
Sbjct: 64 ETDPSNPRRRKTVQMLDDFKITGVNGTHICIVFEVLGDNLLKLIQKSNFRGIPLANVKAM 123
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH-----HKIGMKLPM 203
+QVLEGL+YLHT C+IIHTDIKPEN+L+CVD VR + + T H
Sbjct: 124 TRQVLEGLDYLHTCCQIIHTDIKPENVLLCVDEPHVRSRSVENTSSATNGPHSNPTLPTP 183
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
S D + DP E ++VKIADLGNACW+D H IQTRQYRS+EV+IGAGY
Sbjct: 184 SPPPQAKDTAKQDPPLEECKVNVKIADLGNACWVDHHLTKTIQTRQYRSLEVIIGAGYNT 243
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
+ADIWSTACM FELATGDYLF+P +G+ Y+R++DHLAHI+EL+GPIP+ +L G + +
Sbjct: 244 SADIWSTACMVFELATGDYLFEPHSGESYTRNEDHLAHIIELLGPIPRNILLNGTYSAKS 303
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
FT R I LKPWGL VL EKY WS+ +A+ FA FL PML ++ RA+AA+CL+H
Sbjct: 304 FTRSCELRNISGLKPWGLMDVLLEKYEWSQKDAASFASFLKPMLELDPNKRATAAECLQH 363
Query: 384 PWL 386
PWL
Sbjct: 364 PWL 366
|
Source: Drosophila sechellia Species: Drosophila sechellia Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328721030|ref|XP_003247194.1| PREDICTED: serine/threonine-protein kinase SRPK1-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/415 (46%), Positives = 267/415 (64%), Gaps = 44/415 (10%)
Query: 10 MEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
++Y+ Y PV++G + N RYH+I+KLGWGHFSTVWLSWD F ALK+VKS Y +
Sbjct: 56 LDYKENSYFPVRVGSVINDRYHIIKKLGWGHFSTVWLSWDDVAHNFSALKVVKSAVDYTE 115
Query: 70 TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL 129
+A DEI +LK++ R ++ ++ K+I+L +DF+I G H+ MVFE +G NLL
Sbjct: 116 SALDEIRMLKSIYRHRDLDTN------RTKIIQLFDDFRIDGLRGMHVVMVFEALGPNLL 169
Query: 130 RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189
+LI R++Y+GI + V+ II+QVL+GL YLH C IIHTDIKPENIL+C + ++ A
Sbjct: 170 KLIKRTNYQGIPLYLVKHIIRQVLQGLKYLHETCHIIHTDIKPENILICAQHQYIKLTAE 229
Query: 190 DATKHHKI------------------------GMKLPMSLDSTMSDFS------------ 213
++ K I G++ SLD ++
Sbjct: 230 NSCKQMSILSLRNRKCGKNTADERLQGNYRLDGIRSEQSLDMESESYAESNCYFRKINKF 289
Query: 214 --LLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTA 271
L + +++ +++KIADLGNACW D+H+ + IQTRQYRS+EVL+GAGYG ADIWSTA
Sbjct: 290 KRLYELLDDLGSVNIKIADLGNACWEDNHYTENIQTRQYRSLEVLLGAGYGTPADIWSTA 349
Query: 272 CMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331
C+AFELATGD+LFDP +G Y++D+DH+AHI+EL+G IP V+ GK + +F GN +
Sbjct: 350 CLAFELATGDFLFDPHSGATYNKDEDHIAHIIELLGQIPMYVIQSGKHSSSFFRTNGNLK 409
Query: 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
I NLKPW LY VLTEKY W+ EA F+ FL PML ++Q RASA CL +PW+
Sbjct: 410 HISNLKPWYLYDVLTEKYEWNTKEAKAFSSFLTPMLDLDQDNRASATQCLLNPWM 464
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328721028|ref|XP_001944975.2| PREDICTED: serine/threonine-protein kinase SRPK1-like isoform 3 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/415 (46%), Positives = 267/415 (64%), Gaps = 44/415 (10%)
Query: 10 MEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
++Y+ Y PV++G + N RYH+I+KLGWGHFSTVWLSWD F ALK+VKS Y +
Sbjct: 125 LDYKENSYFPVRVGSVINDRYHIIKKLGWGHFSTVWLSWDDVAHNFSALKVVKSAVDYTE 184
Query: 70 TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL 129
+A DEI +LK++ R ++ ++ K+I+L +DF+I G H+ MVFE +G NLL
Sbjct: 185 SALDEIRMLKSIYRHRDLDTN------RTKIIQLFDDFRIDGLRGMHVVMVFEALGPNLL 238
Query: 130 RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189
+LI R++Y+GI + V+ II+QVL+GL YLH C IIHTDIKPENIL+C + ++ A
Sbjct: 239 KLIKRTNYQGIPLYLVKHIIRQVLQGLKYLHETCHIIHTDIKPENILICAQHQYIKLTAE 298
Query: 190 DATKHHKI------------------------GMKLPMSLDSTMSDFS------------ 213
++ K I G++ SLD ++
Sbjct: 299 NSCKQMSILSLRNRKCGKNTADERLQGNYRLDGIRSEQSLDMESESYAESNCYFRKINKF 358
Query: 214 --LLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTA 271
L + +++ +++KIADLGNACW D+H+ + IQTRQYRS+EVL+GAGYG ADIWSTA
Sbjct: 359 KRLYELLDDLGSVNIKIADLGNACWEDNHYTENIQTRQYRSLEVLLGAGYGTPADIWSTA 418
Query: 272 CMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331
C+AFELATGD+LFDP +G Y++D+DH+AHI+EL+G IP V+ GK + +F GN +
Sbjct: 419 CLAFELATGDFLFDPHSGATYNKDEDHIAHIIELLGQIPMYVIQSGKHSSSFFRTNGNLK 478
Query: 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
I NLKPW LY VLTEKY W+ EA F+ FL PML ++Q RASA CL +PW+
Sbjct: 479 HISNLKPWYLYDVLTEKYEWNTKEAKAFSSFLTPMLDLDQDNRASATQCLLNPWM 533
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 393 | ||||||
| UNIPROTKB|B7UCT2 | 655 | SRPK1 "SFRS protein kinase 1" | 0.458 | 0.274 | 0.601 | 7.5e-120 | |
| UNIPROTKB|E1BR50 | 569 | SRPK2 "Uncharacterized protein | 0.491 | 0.339 | 0.592 | 7.5e-120 | |
| UNIPROTKB|F1ND58 | 688 | SRPK2 "Uncharacterized protein | 0.491 | 0.280 | 0.592 | 7.5e-120 | |
| UNIPROTKB|P78362 | 688 | SRPK2 "SRSF protein kinase 2" | 0.491 | 0.280 | 0.592 | 1.5e-119 | |
| MGI|MGI:1201408 | 681 | Srpk2 "serine/arginine-rich pr | 0.491 | 0.283 | 0.592 | 1.5e-119 | |
| RGD|1305107 | 680 | Srpk2 "SRSF protein kinase 2" | 0.491 | 0.283 | 0.592 | 1.5e-119 | |
| UNIPROTKB|E1BR48 | 648 | SRPK2 "Uncharacterized protein | 0.491 | 0.297 | 0.592 | 2e-119 | |
| UNIPROTKB|B4DS61 | 639 | SRPK1 "SFRS protein kinase 1, | 0.458 | 0.281 | 0.595 | 2.5e-119 | |
| UNIPROTKB|H3BLV9 | 671 | SRPK1 "SRSF protein kinase 1" | 0.458 | 0.268 | 0.595 | 2.5e-119 | |
| UNIPROTKB|Q96SB4 | 655 | SRPK1 "SRSF protein kinase 1" | 0.458 | 0.274 | 0.595 | 2.5e-119 |
| UNIPROTKB|B7UCT2 SRPK1 "SFRS protein kinase 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 614 (221.2 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 110/183 (60%), Positives = 144/183 (78%)
Query: 207 STMSDFSL--LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
ST +F + L+P N + VKIADLGNACW+ HF ++IQTRQYRS+EVLIG+GY
Sbjct: 473 STAGNFLINPLEPKN-AEKLQVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 531
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+EL+G +P++++ GK + +F
Sbjct: 532 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 591
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
T +G+ + I LKPWGL++VL EKY WS+ EA+ F DFLLPML + + RA+AADCLRHP
Sbjct: 592 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAADCLRHP 651
Query: 385 WLN 387
WLN
Sbjct: 652 WLN 654
|
|
| UNIPROTKB|E1BR50 SRPK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 118/199 (59%), Positives = 153/199 (76%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 53 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 112
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ N + V++L++DFKI NG H+CMVFEV
Sbjct: 113 AQHYTETALDEIKLLKCV-RESDP-----NDPNKDMVVQLIDDFKISGMNGIHVCMVFEV 166
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ I+ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 167 LGHHLLKWIIKSNYQGLPIRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 226
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 227 VRRMAAEATEWQKAGAPPP 245
|
|
| UNIPROTKB|F1ND58 SRPK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 118/199 (59%), Positives = 153/199 (76%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 53 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 112
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ N + V++L++DFKI NG H+CMVFEV
Sbjct: 113 AQHYTETALDEIKLLKCV-RESDP-----NDPNKDMVVQLIDDFKISGMNGIHVCMVFEV 166
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ I+ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 167 LGHHLLKWIIKSNYQGLPIRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 226
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 227 VRRMAAEATEWQKAGAPPP 245
|
|
| UNIPROTKB|P78362 SRPK2 "SRSF protein kinase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 601 (216.6 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 118/199 (59%), Positives = 154/199 (77%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 55 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 114
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ S N + V++L++DFKI NG H+CMVFEV
Sbjct: 115 AQHYTETALDEIKLLKCV-RESD--PSDPN---KDMVVQLIDDFKISGMNGIHVCMVFEV 168
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ ++ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 169 LGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 228
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 229 VRRMAAEATEWQKAGAPPP 247
|
|
| MGI|MGI:1201408 Srpk2 "serine/arginine-rich protein specific kinase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 601 (216.6 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 118/199 (59%), Positives = 154/199 (77%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 53 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 112
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ S N + V++L++DFKI NG H+CMVFEV
Sbjct: 113 AQHYTETALDEIKLLKCV-RESD--PSDPN---KDMVVQLIDDFKISGMNGIHVCMVFEV 166
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ ++ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 167 LGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 226
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 227 VRRMAAEATEWQKAGAPPP 245
|
|
| RGD|1305107 Srpk2 "SRSF protein kinase 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 601 (216.6 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 118/199 (59%), Positives = 154/199 (77%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 52 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 111
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ S N + V++L++DFKI NG H+CMVFEV
Sbjct: 112 AQHYTETALDEIKLLKCV-RESD--PSDPN---KDMVVQLIDDFKISGMNGIHVCMVFEV 165
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ ++ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 166 LGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDGAY 225
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 226 VRRMAAEATEWQKAGAPPP 244
|
|
| UNIPROTKB|E1BR48 SRPK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 2.0e-119, Sum P(2) = 2.0e-119
Identities = 118/199 (59%), Positives = 153/199 (76%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
++QE +Y GGY PV+IGDLFN RYHVIRKLGWGHFSTVWL WD+Q K FVA+K+VKS
Sbjct: 53 EEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 112
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
Q Y +TA DEI LLK V R+S+ N + V++L++DFKI NG H+CMVFEV
Sbjct: 113 AQHYTETALDEIKLLKCV-RESDP-----NDPNKDMVVQLIDDFKISGMNGIHVCMVFEV 166
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ I+ V++II+QVL+GL+YLH++C+IIHTDIKPENILMCVD
Sbjct: 167 LGHHLLKWIIKSNYQGLPIRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAY 226
Query: 184 VRRMARDATKHHKIGMKLP 202
VRRMA +AT+ K G P
Sbjct: 227 VRRMAAEATEWQKAGAPPP 245
|
|
| UNIPROTKB|B4DS61 SRPK1 "SFRS protein kinase 1, isoform CRA_f" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 2.5e-119, Sum P(2) = 2.5e-119
Identities = 109/183 (59%), Positives = 144/183 (78%)
Query: 207 STMSDFSL--LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
ST +F + L+P N + VKIADLGNACW+ HF ++IQTRQYRS+EVLIG+GY
Sbjct: 457 STAGNFLVNPLEPKN-AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 515
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+EL+G +P++++ GK + +F
Sbjct: 516 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 575
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
T +G+ + I LKPWGL++VL EKY WS+ EA+ F DFLLPML + + RA+AA+CLRHP
Sbjct: 576 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 635
Query: 385 WLN 387
WLN
Sbjct: 636 WLN 638
|
|
| UNIPROTKB|H3BLV9 SRPK1 "SRSF protein kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 2.5e-119, Sum P(2) = 2.5e-119
Identities = 109/183 (59%), Positives = 144/183 (78%)
Query: 207 STMSDFSL--LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
ST +F + L+P N + VKIADLGNACW+ HF ++IQTRQYRS+EVLIG+GY
Sbjct: 489 STAGNFLVNPLEPKN-AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 547
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+EL+G +P++++ GK + +F
Sbjct: 548 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 607
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
T +G+ + I LKPWGL++VL EKY WS+ EA+ F DFLLPML + + RA+AA+CLRHP
Sbjct: 608 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 667
Query: 385 WLN 387
WLN
Sbjct: 668 WLN 670
|
|
| UNIPROTKB|Q96SB4 SRPK1 "SRSF protein kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 2.5e-119, Sum P(2) = 2.5e-119
Identities = 109/183 (59%), Positives = 144/183 (78%)
Query: 207 STMSDFSL--LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
ST +F + L+P N + VKIADLGNACW+ HF ++IQTRQYRS+EVLIG+GY
Sbjct: 473 STAGNFLVNPLEPKN-AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 531
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
ADIWSTACMAFELATGDYLF+P +G+EY+RD+DH+A I+EL+G +P++++ GK + +F
Sbjct: 532 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 591
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
T +G+ + I LKPWGL++VL EKY WS+ EA+ F DFLLPML + + RA+AA+CLRHP
Sbjct: 592 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 651
Query: 385 WLN 387
WLN
Sbjct: 652 WLN 654
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5RD27 | SRPK1_PONAB | 2, ., 7, ., 1, 1, ., 1 | 0.5956 | 0.4580 | 0.2748 | yes | N/A |
| Q86A12 | SKY1_DICDI | 2, ., 7, ., 1, 1, ., 1 | 0.5266 | 0.4274 | 0.2560 | yes | N/A |
| Q03563 | SPK1_CAEEL | 2, ., 7, ., 1, 1, ., 1 | 0.5288 | 0.5139 | 0.2013 | yes | N/A |
| O54781 | SRPK2_MOUSE | 2, ., 7, ., 1, 1, ., 1 | 0.5829 | 0.4910 | 0.2834 | yes | N/A |
| Q96SB4 | SRPK1_HUMAN | 2, ., 7, ., 1, 1, ., 1 | 0.5956 | 0.4580 | 0.2748 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.914 |
| 3rd Layer | 2.7.11 | 0.921 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 393 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 3e-45 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-38 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 5e-36 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 5e-34 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-29 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-29 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 8e-28 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 9e-28 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-27 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 3e-27 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 3e-25 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 3e-25 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 4e-24 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 6e-24 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 8e-24 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 4e-23 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-22 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 6e-22 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-21 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 9e-21 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 2e-20 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 5e-20 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-18 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-18 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-18 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 3e-18 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 3e-18 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 9e-18 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 1e-17 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 2e-17 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 3e-17 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 4e-17 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 6e-17 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 7e-17 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 8e-17 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 4e-16 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 7e-16 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-15 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 1e-15 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-15 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 3e-15 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 3e-15 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 6e-15 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 7e-15 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 9e-15 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 1e-14 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-14 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-14 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 2e-14 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 5e-14 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-13 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 1e-13 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-13 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 4e-13 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 4e-13 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-13 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 5e-13 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 5e-13 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-13 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 7e-13 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 9e-13 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-12 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 2e-12 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-12 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 4e-12 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-12 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 5e-12 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 6e-12 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-11 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 2e-11 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 2e-11 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 4e-11 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 5e-11 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 6e-11 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 9e-11 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-10 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-10 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-10 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 3e-10 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 6e-10 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 2e-09 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 2e-09 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 2e-09 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 3e-09 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 3e-09 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 5e-09 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 7e-09 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 1e-08 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 1e-08 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 1e-08 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 1e-08 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 2e-08 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 3e-08 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 4e-08 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 5e-08 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 6e-08 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 7e-08 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-07 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 2e-07 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-07 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 2e-07 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-07 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 4e-07 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 7e-07 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 9e-07 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-06 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 1e-06 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-06 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 3e-06 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 4e-06 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 4e-06 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 4e-06 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 5e-06 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 6e-06 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 7e-06 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 1e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-05 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 2e-05 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 3e-05 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 4e-05 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 4e-05 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 4e-05 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-05 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 6e-05 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 8e-05 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 9e-05 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 1e-04 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 1e-04 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 3e-04 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 3e-04 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 3e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-04 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 3e-04 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-04 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 4e-04 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 4e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-04 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 4e-04 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 7e-04 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 0.001 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 0.001 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 0.001 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 0.002 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 0.002 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 0.002 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 0.003 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 0.003 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.004 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 0.004 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 0.004 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 0.004 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 0.004 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 3e-45
Identities = 81/362 (22%), Positives = 132/362 (36%), Gaps = 113/362 (31%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNV 87
Y ++ KLG G F V+L+ D + VA+K++K ++ + EI +LK +
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLK----- 55
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVR 146
++RL + F + + +V E G +L L+ + R
Sbjct: 56 ---------HPNIVRLYDVF----EDEDKLYLVMEYCEGGDLFDLL--KKRGRLSEDEAR 100
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
++Q+L L YLH++ I+H D+KPENIL LD
Sbjct: 101 FYLRQILSALEYLHSK-GIVHRDLKPENIL----------------------------LD 131
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGPA 264
VK+AD G A +D + T +Y + EVL+G GYG A
Sbjct: 132 EDG---------------HVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKA 176
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIWS + +EL TG F DD L + + +G
Sbjct: 177 VDIWSLGVILYELLTGKPPFP---------GDDQLLELFKKIGKPKPPFPP--------- 218
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
++ S + D + +L + + R +A + L+HP
Sbjct: 219 ----------------------PEWDISP----EAKDLIRKLLVKDPEKRLTAEEALQHP 252
Query: 385 WL 386
+
Sbjct: 253 FF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 4e-38
Identities = 85/365 (23%), Positives = 128/365 (35%), Gaps = 113/365 (30%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKSN 86
Y ++RKLG G F TV+ + VA+KI+K TAR EI +L+ +
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLS---- 56
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
++RL++ F + H+ +V E G +L ++R +
Sbjct: 57 ----------HPNIVRLIDAF----EDKDHLYLVMEYCEGGDLFDYLSR--GGPLSEDEA 100
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ I Q+L GL YLH IIH D+KPENIL+ +
Sbjct: 101 KKIALQILRGLEYLH-SNGIIHRDLKPENILLDENGV----------------------- 136
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNAC--WIDDHFADEIQ-TRQYRSVEVLIGA-GY 261
VKIAD G A T Y + EVL+G GY
Sbjct: 137 --------------------VKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGY 176
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
GP D+WS + +EL TG F + D L I ++GP +
Sbjct: 177 GPKVDVWSLGVILYELLTGKPPFSGE------NILDQLQLIRRILGPPLE---------- 220
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
+ + + D + L+ + R +A + L
Sbjct: 221 -------------------------FDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255
Query: 382 RHPWL 386
+HPW
Sbjct: 256 QHPWF 260
|
Length = 260 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 5e-36
Identities = 91/365 (24%), Positives = 146/365 (40%), Gaps = 91/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKS 85
Y + KLG G + V+ + D + VALK ++ D + + R EI LLK + +
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR-EISLLKEL-KHP 58
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
N +++LL+ I++ + +VFE +L + + + + +
Sbjct: 59 N-------------IVKLLD--VIHTER--KLYLVFEYCDMDLKKYLDKRP-GPLSPNLI 100
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++I+ Q+L GL Y H+ RI+H D+KP+NIL+ D
Sbjct: 101 KSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDG------------------------ 135
Query: 206 DSTMSDFSLLDPANEVYDISVKIAD--LGNACWIDDH-FADEIQTRQYRSVEVLIGA-GY 261
+K+AD L A I + E+ T YR+ E+L+G+ Y
Sbjct: 136 -------------------VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHY 176
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
A DIWS C+ E+ TG LF G + D L I +++G P E G L
Sbjct: 177 STAVDIWSVGCIFAEMITGKPLF---PGDS---EIDQLFKIFQILG-TPTEESWPGVTKL 229
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
+ P + + L + E D L ML N R SA + L
Sbjct: 230 PDYKP--------TFPKF-PPKDLEKVLPRLDPEG---IDLLSKMLQYNPAKRISAKEAL 277
Query: 382 RHPWL 386
+HP+
Sbjct: 278 KHPYF 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 5e-34
Identities = 95/364 (26%), Positives = 149/364 (40%), Gaps = 88/364 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVG--RKSNV 87
Y VI++LG G F +V+L+ + + VA+K +K + + +E + L+ V RK N
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMK--KKFYSW--EECMNLREVKSLRKLNE 56
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN--V 145
H +++L F+ + VFE M NL +L+ D KG +
Sbjct: 57 H---------PNIVKLKEVFREN----DELYFVFEYMEGNLYQLM--KDRKGKPFSESVI 101
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
R+II Q+L+GL ++H H D+KPEN+L+
Sbjct: 102 RSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPE------------------------ 136
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG-YG 262
VKIAD G A I + D + TR YR+ E+L+ + Y
Sbjct: 137 -------------------VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYS 177
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIW+ C+ EL T LF G S + D L I ++G K+ +G K
Sbjct: 178 SPVDIWALGCIMAELYTLRPLF---PG---SSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ F R P L+Q++ + D + ML + K R +A+ L+
Sbjct: 232 ----KLGF-RFPQFAPTSLHQLIPNASP-------EAIDLIKDMLRWDPKKRPTASQALQ 279
Query: 383 HPWL 386
HP+
Sbjct: 280 HPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 1e-29
Identities = 94/368 (25%), Positives = 143/368 (38%), Gaps = 94/368 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSN 86
Y I ++G G + V+ + + + VALK ++ + + TA EI LL+ + +
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPN- 59
Query: 87 VHSSAYNTQASEKVIRLLNDFKIY-SRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
++RL +I S+ I MVFE M ++L L+ + K +
Sbjct: 60 -------------IVRLK---EIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVK-FTESQI 102
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ +KQ+LEGL YLH I+H DIK NIL+
Sbjct: 103 KCYMKQLLEGLQYLH-SNGILHRDIKGSNILI---------------------------- 133
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE----IQTRQYRSVEVLIGA-G 260
+D L K+AD G A + + + T YR E+L+GA
Sbjct: 134 ---NNDGVL------------KLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATR 178
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
YGP D+WS C+ EL G +F G + + L I EL G E K
Sbjct: 179 YGPEVDMWSVGCILAELFLGKPIF---QGST---ELEQLEKIFELCGSPTDENWPGVSKL 232
Query: 321 LRY--FTPQGNFRRIDNLKPWGLYQVLTEKY-HWSKAEASDFADFLLPMLHVNQKLRASA 377
+ P+ ++R L E + H A D D LL + + K R SA
Sbjct: 233 PWFENLKPKKPYKRR-----------LREFFKHLIDPSALDLLDKLLTL---DPKKRISA 278
Query: 378 ADCLRHPW 385
L+H +
Sbjct: 279 DQALQHEY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-29
Identities = 92/378 (24%), Positives = 145/378 (38%), Gaps = 96/378 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVK--SDQVYADTARDEIVLLKAVGRKS 85
RY +++ +G G + V + D + VA+K I D + A EI LL+ +
Sbjct: 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR--- 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNG-THICMVFEVMGYNLLRLIARSDYKGIHIQN 144
H E +I LL+ + S + +V E+M +L ++I + +
Sbjct: 58 --H---------ENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVI----KSPQPLTD 102
Query: 145 --VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++ + Q+L GL YLH+ +IH D+KP NIL
Sbjct: 103 DHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNIL-------------------------- 135
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ------TRQYRSVEVL 256
N + +KI D G A +D ++ TR YR+ E+L
Sbjct: 136 ---------------VNS--NCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELL 178
Query: 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ + Y A DIWS C+ EL T LF G++Y D L IVE++G +E L
Sbjct: 179 LSSSRYTKAIDIWSVGCIFAELLTRKPLF---PGRDYI---DQLNLIVEVLGTPSEEDLK 232
Query: 316 Q--GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
+K Y + KP ++ + D L ML + K
Sbjct: 233 FITSEKARNYLKSLPKKPK----KPLS--KLFPGASP-------EAIDLLEKMLVFDPKK 279
Query: 374 RASAADCLRHPWLNPRRS 391
R +A + L HP+L
Sbjct: 280 RITADEALAHPYLAQLHD 297
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 8e-28
Identities = 87/364 (23%), Positives = 135/364 (37%), Gaps = 88/364 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSN 86
Y + K+G G + V+ + D VA+K +K + TA EI LLK + +
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPN- 59
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
+I+LL+ F R+ + +VFE M +L +LI G+ ++
Sbjct: 60 -------------IIKLLDVF----RHKGDLYLVFEFMDTDLYKLIKDRQR-GLPESLIK 101
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ + Q+L+GL + H I+H D+KPEN+L+
Sbjct: 102 SYLYQLLQGLAFCH-SHGILHRDLKPENLLI----------------------------- 131
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGA-GYG 262
V +K+AD G A + + TR YR+ E+L+G GY
Sbjct: 132 ----------NTEGV----LKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYS 177
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL + LF GK D L I +G EV + R
Sbjct: 178 TPVDIWSVGCIFAELLSRRPLF---PGKSEI---DQLFKIFRTLGTPDPEVWPKFTSLAR 231
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ L ++ + D L MLH + R +A L
Sbjct: 232 NYKF-----SFPKKAGMPLPKLFP-------NASPQALDLLSQMLHYDPHKRITAEQALA 279
Query: 383 HPWL 386
HP+
Sbjct: 280 HPYF 283
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 9e-28
Identities = 89/366 (24%), Positives = 139/366 (37%), Gaps = 87/366 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK---IVKSDQVYADTARDEIVLLKAVGRKS 85
+Y V+ +G G + V + VA+K + D+ TA E+ +L+ +
Sbjct: 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL---- 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
E ++ L F+ R + +VFE + LL L+ S G+ V
Sbjct: 58 ----------RHENIVNLKEAFRRKGR----LYLVFEYVERTLLELLEASPG-GLPPDAV 102
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
R+ I Q+L+ + Y H+ IIH DIKPENIL V V
Sbjct: 103 RSYIWQLLQAIAYCHSH-NIIHRDIKPENIL--VSESGV--------------------- 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNA----CWIDDHFADEIQTRQYRSVEVLIGAG- 260
+K+ D G A D + TR YR+ E+L+G
Sbjct: 139 --------------------LKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTN 178
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
YG D+W+ C+ EL G+ LF G D D L I + +GP+P
Sbjct: 179 YGKPVDVWAIGCIMAELLDGEPLF---PGDS---DIDQLYLIQKCLGPLPPSHQELFSSN 232
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
R+ + +P + L +Y +S DFL L ++ K R + +
Sbjct: 233 PRFAG----VAFPEPSQP----ESLERRY--PGKVSSPALDFLKACLRMDPKERLTCDEL 282
Query: 381 LRHPWL 386
L+HP+
Sbjct: 283 LQHPYF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 2e-27
Identities = 64/249 (25%), Positives = 97/249 (38%), Gaps = 69/249 (27%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93
LG G F TV+L+ D + VA+KI+K + EI +LK +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL------------ 48
Query: 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQV 152
+++L + H+ +V E +L L+ + + + + I+ Q+
Sbjct: 49 --NHPNIVKLYG----VFEDENHLYLVMEYCEGGSLKDLL-KENEGKLSEDEILRILLQI 101
Query: 153 LEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDF 212
LEGL YLH IIH D+KPENIL LDS
Sbjct: 102 LEGLEYLH-SNGIIHRDLKPENIL----------------------------LDSD---- 128
Query: 213 SLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG-YGPAADIW 268
+ VK+AD G + + + T Y + EVL+G G Y +DIW
Sbjct: 129 ----------NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIW 178
Query: 269 STACMAFEL 277
S + +EL
Sbjct: 179 SLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 3e-27
Identities = 87/369 (23%), Positives = 144/369 (39%), Gaps = 94/369 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRKS 85
Y + ++G G + TV+ + DL FVALK V+ + + T R EI LLK +
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLR-EIALLKQL---- 55
Query: 86 NVHSSAYNTQASEKVIRLLNDF-KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
+ ++RLL+ + + +VFE + +L +++ G+ +
Sbjct: 56 -------ESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPET 108
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
++ +++Q+L G+++LH+ RI+H D+KP+NIL + D
Sbjct: 109 IKDLMRQLLRGVDFLHSH-RIVHRDLKPQNIL----------VTSDGQ------------ 145
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGYG 262
VKIAD G A A + T YR+ EVL+ + Y
Sbjct: 146 ---------------------VKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYA 184
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PI----PKEVLSQG 317
D+WS C+ EL LF + + D L I +++G P P+ V
Sbjct: 185 TPVDMWSVGCIFAELFRRRPLFRGTS------EADQLDKIFDVIGLPSEEEWPRNVS--- 235
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
P+ +F + E+ D L ML N R SA
Sbjct: 236 -------LPRSSFPSYTPRSFKSFVPEICEEGL----------DLLKKMLTFNPHKRISA 278
Query: 378 ADCLRHPWL 386
+ L+HP+
Sbjct: 279 FEALQHPYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 3e-25
Identities = 97/371 (26%), Positives = 159/371 (42%), Gaps = 72/371 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
R+ ++ LG G F V +WD + K + A+KIV++ Y A+ EI ++ V R+++
Sbjct: 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKV-RQADP- 187
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
L+ + + H+C+V G LL I + + +++ I
Sbjct: 188 ---------ADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMK--HGPFSHRHLAQI 236
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I Q L+Y HT+ ++HTD+KPENILM V + A LP
Sbjct: 237 IFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA---------LPP----- 282
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE--IQTRQYRSVEVLIGAGYGPAAD 266
DP V+I DLG C D+ + + TR YRS EV++G G+ + D
Sbjct: 283 -------DPCR------VRICDLGGCC--DERHSRTAIVSTRHYRSPEVVLGLGWMYSTD 327
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE-----------VLS 315
+WS C+ +EL TG L+D E HL + + +G +P E +L
Sbjct: 328 MWSMGCIIYELYTGKLLYDTHDNLE------HLHLMEKTLGRLPSEWAGRCGTEEARLLY 381
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
LR T + RI +P + +V+ + D + +LH +++ R
Sbjct: 382 NSAGQLRPCTDPKHLARIARARP--VREVIRDDL---------LCDLIYGLLHYDRQKRL 430
Query: 376 SAADCLRHPWL 386
+A HP++
Sbjct: 431 NARQMTTHPYV 441
|
Length = 467 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 3e-25
Identities = 94/369 (25%), Positives = 139/369 (37%), Gaps = 97/369 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD------TARDEIVLLKAVG 82
RY +KLG G ++ V+ + D + VA+K +K + TA EI LL+ +
Sbjct: 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
H +I LL+ F S I +VFE M +L ++I K I +
Sbjct: 61 -----H---------PNIIGLLDVFGHKSN----INLVFEFMETDLEKVIKD---KSIVL 99
Query: 143 Q--NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
++++ + L GL YLH I+H D+KP N+L +A D
Sbjct: 100 TPADIKSYMLMTLRGLEYLH-SNWILHRDLKPNNLL----------IASDGV-------- 140
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLI 257
+K+AD G A + ++ TR YR+ E+L
Sbjct: 141 -------------------------LKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLF 175
Query: 258 GAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
GA YG D+WS C+ EL G D D L I E +G P E
Sbjct: 176 GARHYGVGVDMWSVGCIFAELLLRVPFL---PG---DSDIDQLGKIFEALG-TPTEENWP 228
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
G +L + P L Q+ A + D D L +L +N R +
Sbjct: 229 GVTSLPDYVE------FKPFPPTPLKQIFP-------AASDDALDLLQRLLTLNPNKRIT 275
Query: 377 AADCLRHPW 385
A L HP+
Sbjct: 276 ARQALEHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 4e-24
Identities = 88/364 (24%), Positives = 146/364 (40%), Gaps = 83/364 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKS 85
RY ++ ++G G V+ + D + VALK V ++ + A EI L+A
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ--- 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V++LL+ F +G+ +V E M +L ++ + + + V
Sbjct: 58 -----------HPYVVKLLDVF----PHGSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQV 101
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ ++ +L+G+ Y+H I+H D+KP N+L+ A KI
Sbjct: 102 KSYMRMLLKGVAYMH-ANGIMHRDLKPANLLI------------SADGVLKIA------- 141
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
DF L +E ++ ++ TR YR+ E+L GA Y P
Sbjct: 142 -----DFGLARLFSEE---------------EPRLYSHQVATRWYRAPELLYGARKYDPG 181
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDD-DHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+W+ C+ EL G LF +D + LA + +G P E G +L
Sbjct: 182 VDLWAVGCIFAELLNGSPLFP-------GENDIEQLAIVFRTLG-TPNEETWPGLTSL-- 231
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
P N KP L ++ + + EA D L +L + R SAA+ LRH
Sbjct: 232 --PDYNKITFPESKPIPLEEIFPD----ASPEA---LDLLKGLLVYDPSKRLSAAEALRH 282
Query: 384 PWLN 387
P+
Sbjct: 283 PYFT 286
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 6e-24
Identities = 97/376 (25%), Positives = 155/376 (41%), Gaps = 99/376 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVAL-KIVKSDQVYADTARD--EIVLLKAVGRKS 85
+Y +++KLG G + VW + D + K VAL KI + + D R EI+ L+ +G
Sbjct: 8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHP 67
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
N +++LLN K + N I +VFE M +L +I + + +H
Sbjct: 68 N-------------IVKLLNVIK--AENDKDIYLVFEYMETDLHAVIRANILEDVHK--- 109
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
R I+ Q+L+ L Y+H+ +IH D+KP NIL L
Sbjct: 110 RYIMYQLLKALKYIHSG-NVIHRDLKPSNIL----------------------------L 140
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE--------IQTRQYRSVEVLI 257
+S D VK+AD G A + + + + TR YR+ E+L+
Sbjct: 141 NS---------------DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILL 185
Query: 258 GAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL-- 314
G+ Y D+WS C+ E+ G LF G + + L I+E++GP E +
Sbjct: 186 GSTRYTKGVDMWSVGCILGEMLLGKPLF---PG---TSTLNQLEKIIEVIGPPSAEDIES 239
Query: 315 --SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQK 372
S T+ + + L ++L KA D D L +L N
Sbjct: 240 IKSPFAATM--------LDSLPSRPRKPLDELL------PKASD-DALDLLKKLLVFNPN 284
Query: 373 LRASAADCLRHPWLNP 388
R +A + L HP++
Sbjct: 285 KRLTAEEALEHPYVAQ 300
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 101 bits (251), Expect = 8e-24
Identities = 84/371 (22%), Positives = 135/371 (36%), Gaps = 98/371 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRKS 85
Y ++RKLG G F V+L+ D + VALK++ S + EI +L ++
Sbjct: 2 YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN- 144
N+ ++L + F+ + + +V E + L + + + +
Sbjct: 59 NI-------------VKLYDFFQ----DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSES 101
Query: 145 -VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
I+ Q+L L YLH++ IIH DIKPENIL+ D V+
Sbjct: 102 EALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVK------------------ 142
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG---AG 260
+ DF ++ + D G+ I + + T Y + EVL+G A
Sbjct: 143 -----LIDFG----------LAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAY 187
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
++DIWS +EL TG F+ + K S L I+EL P LS
Sbjct: 188 ASSSSDIWSLGITLYELLTGLPPFEGE--KNSSATSQTLKIILELPTPSLASPLSPSNPE 245
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
L +D L +L + K R S++
Sbjct: 246 LIS---------------------------------KAASDLLKKLLAKDPKNRLSSSSD 272
Query: 381 LRHPWLNPRRS 391
L H L +
Sbjct: 273 LSHDLLAHLKL 283
|
Length = 384 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 4e-23
Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 87/362 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS--DQVYADTARDEIVLLKAVGRKSNV 87
Y ++ K+G G FS V + + + A+K +K + EI L+ + N
Sbjct: 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPN- 59
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
++RL+ ++ R + +VFE+M NL LI + + + + V++
Sbjct: 60 ------------ILRLIE--VLFDRKTGRLALVFELMDMNLYELI-KGRKRPLPEKRVKS 104
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ Q+L+ L+++H + I H DIKPENIL
Sbjct: 105 YMYQLLKSLDHMH-RNGIFHRDIKPENIL------------------------------- 132
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG-YGPA 264
+ D +K+AD G+ I + + I TR YR+ E L+ G YGP
Sbjct: 133 -------------IKDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPK 179
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIW+ C+ FE+ + LF G + D +A I +++G EVL KK +
Sbjct: 180 MDIWAVGCVFFEILSLFPLF---PGTN---ELDQIAKIHDVLGTPDAEVL---KKFRKSR 230
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRH 383
NF + K GL ++L AS D L +L + R +A LRH
Sbjct: 231 HMNYNF---PSKKGTGLRKLLP--------NASAEGLDLLKKLLAYDPDERITAKQALRH 279
Query: 384 PW 385
P+
Sbjct: 280 PY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 95.7 bits (239), Expect = 1e-22
Identities = 79/372 (21%), Positives = 125/372 (33%), Gaps = 126/372 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK---IVKSDQVYADTARDEIVLLKAVGRKS 85
+ LG G F +V+L+ D +A+K + + + EI +L ++
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL---- 56
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQN 144
++R + + + E + G +L L+ + + +
Sbjct: 57 ----------QHPNIVRYYGSER--DEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPV 102
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+R +Q+LEGL YLH+ I+H DIK NIL VD D V
Sbjct: 103 IRKYTRQILEGLAYLHSN-GIVHRDIKGANIL--VDSDGV-------------------- 139
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVEVLIGA 259
VK+AD G A + D E T + + EV+ G
Sbjct: 140 ---------------------VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGE 178
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHI-----VELVGPIPKEVL 314
YG AADIWS C E+ATG +S + +A + IP+ +
Sbjct: 179 EYGRAADIWSLGCTVIEMATG--------KPPWSELGNPMAALYKIGSSGEPPEIPEHLS 230
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
+ K DFL L + K R
Sbjct: 231 EEAK------------------------------------------DFLRKCLRRDPKKR 248
Query: 375 ASAADCLRHPWL 386
+A + L+HP+L
Sbjct: 249 PTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 6e-22
Identities = 77/364 (21%), Positives = 120/364 (32%), Gaps = 120/364 (32%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ K+G G F V+ + + VA+K++K
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIK-------------------------LE 36
Query: 90 SAYNTQASEKVIRLLNDFK---IYSRNGTHIC-----MVFEVMGYNLLRLIARSDYKGIH 141
S + I++L K I G+++ +V E L+ + +S + +
Sbjct: 37 SKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLT 96
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ + K++L+GL YLH+ IIH DIK NIL+ D +KL
Sbjct: 97 ESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDG----------------EVKL 139
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
DF L S +++D + + T + + EV+ G Y
Sbjct: 140 --------IDFGL----------SAQLSDTK----ARNTM---VGTPYWMAPEVINGKPY 174
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
ADIWS A ELA G P YS A P
Sbjct: 175 DYKADIWSLGITAIELAEGKP---P-----YSELPPMKALFKIATNGPPG---------- 216
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
L WS +F DFL L N + R +A L
Sbjct: 217 -----------------------LRNPEKWSD----EFKDFLKKCLQKNPEKRPTAEQLL 249
Query: 382 RHPW 385
+HP+
Sbjct: 250 KHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 2e-21
Identities = 87/380 (22%), Positives = 148/380 (38%), Gaps = 88/380 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSW--DLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVG 82
+Y + +G G + V+ + + +D A+K K D+ +A EI LL+ +
Sbjct: 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL- 59
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA-RSDYKGIH 141
E V+ L+ F + ++F+ ++L ++I K +
Sbjct: 60 -------------KHENVVSLVEVF--LEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVS 104
Query: 142 IQN--VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I V++++ Q+L G++YLH+ ++H D+KP NIL+
Sbjct: 105 IPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILV---------------------- 141
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADE---IQTRQYRSV 253
M + VKI DLG A + AD + T YR+
Sbjct: 142 ---------MGEGP--------ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP 184
Query: 254 EVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD---DDHLAHIVELVGPI 309
E+L+GA Y A DIW+ C+ EL T + +F + K + D L I E++G
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTP 244
Query: 310 PKEVLSQGKKTLRYFTPQGNFRRI----DNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365
++ KK Y T +F+ ++L W K S D L
Sbjct: 245 TEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKW---------MEKHKKPDSQGFDLLRK 295
Query: 366 MLHVNQKLRASAADCLRHPW 385
+L + R +A + L HP+
Sbjct: 296 LLEYDPTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 9e-21
Identities = 101/386 (26%), Positives = 163/386 (42%), Gaps = 87/386 (22%)
Query: 17 YCPVQIGD-LFN--FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADT 70
+ V++GD F RY ++ +G G V ++D VA+K + + +A
Sbjct: 2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKR 61
Query: 71 ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF---KIYSRNGTHICMVFEVMGYN 127
A E+VL+K V K+ +I LLN F K + +V E+M N
Sbjct: 62 AYRELVLMKLVNHKN--------------IIGLLNVFTPQKSLE-EFQDVYLVMELMDAN 106
Query: 128 LLRLIARS-DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
L ++I D++ + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 107 LCQVIQMDLDHERMSY-----LLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 151
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
K D ++KI D G A F
Sbjct: 152 ------KS----------------------------DCTLKILDFGLARTAGTSFMMTPY 177
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D I+E
Sbjct: 178 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLF---PGTDHI---DQWNKIIE 231
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E +S+ + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSE--SHNKLKASQARD 289
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ + R S D L+HP++N
Sbjct: 290 LLSKMLVIDPEKRISVDDALQHPYIN 315
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 90.0 bits (223), Expect = 2e-20
Identities = 94/374 (25%), Positives = 150/374 (40%), Gaps = 102/374 (27%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
+Y + ++G G + TV+ + D FVALK V+ D + T R E+ LLK +
Sbjct: 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVR-EVALLKRLEAF 59
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNG--THICMVFEVMGYNLLRLIARSDYKGIHI 142
+ ++RL+ D SR T + +VFE + +L + + G+
Sbjct: 60 DH-----------PNIVRLM-DVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPA 107
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ ++ +++Q L GL++LH C I+H D+KPENIL+
Sbjct: 108 ETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILV------------------------- 141
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE--IQTRQYRSVEVLIGAG 260
VK+AD G A A + T YR+ EVL+ +
Sbjct: 142 ------------------TSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQST 183
Query: 261 YGPAADIWSTACMAFELATGDYLF--DPKAGKEYSRDDDHLAHIVELVGPIPKE------ 312
Y D+WS C+ E+ LF + +A D L I +L+G P++
Sbjct: 184 YATPVDMWSVGCIFAEMFRRKPLFCGNSEA--------DQLGKIFDLIGLPPEDDWPRDV 235
Query: 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQK 372
L +G F+P+G R + ++ P + E A LL ML N
Sbjct: 236 TLPRGA-----FSPRGP-RPVQSVVP-----EIEESG----------AQLLLEMLTFNPH 274
Query: 373 LRASAADCLRHPWL 386
R SA L+HP+
Sbjct: 275 KRISAFRALQHPFF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 5e-20
Identities = 96/371 (25%), Positives = 144/371 (38%), Gaps = 99/371 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVK--SDQVYADTARDEIVLLKAVGRKS 85
RY ++ +G G F V + D VA+K I+K S V A E+ LLK + R
Sbjct: 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHE 69
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
N+ S L+D I I V E++G +L RL+ + + Q +
Sbjct: 70 NIIS--------------LSDIFISPL--EDIYFVTELLGTDLHRLLTS---RPLEKQFI 110
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + Q+L GL Y+H+ ++H D+KP NIL+
Sbjct: 111 QYFLYQILRGLKYVHS-AGVVHRDLKPSNILI---------------------------- 141
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYGPA 264
NE D+ KI D G A D + TR YR+ E+++ Y
Sbjct: 142 -------------NENCDL--KICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVE 186
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAH---IVELVGPIPKEVLSQ--GKK 319
DIWS C+ E+ G LF K DH+ I +L+G P +V++ +
Sbjct: 187 VDIWSAGCIFAEMLEGKPLFPGK---------DHVNQFSIITDLLGTPPDDVINTICSEN 237
Query: 320 TLRYFT--PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
TLR+ P+ A+ D L ML + + R SA
Sbjct: 238 TLRFVQSLPKREPVPFSEKFK--------------NADP-SAIDLLEKMLVFDPQKRISA 282
Query: 378 ADCLRHPWLNP 388
A+ L HP+L P
Sbjct: 283 AEALAHPYLAP 293
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 1e-18
Identities = 80/364 (21%), Positives = 121/364 (33%), Gaps = 116/364 (31%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK-SNVHSS 90
++ LG G V+ ALK + D + K + R+ + S
Sbjct: 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVD--------GDEEFRKQLLRELKTLRSC 56
Query: 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTII 149
S V++ + + + G I +V E M G +L L+ + I + I
Sbjct: 57 E-----SPYVVKC---YGAFYKEGE-ISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIA 105
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
+Q+L+GL+YLHT+ IIH DIKP N+L ++S
Sbjct: 106 RQILKGLDYLHTKRHIIHRDIKPSNLL----------------------------INSKG 137
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGPAAD 266
VKIAD G + +++ + T Y S E + G Y AAD
Sbjct: 138 ---------------EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAAD 182
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326
IWS E A G + F P
Sbjct: 183 IWSLGLTLLECALGKFPFLPP--------------------------------------- 203
Query: 327 QGNFRRIDNLKPWGLYQVL--TEKYHWSKAEASD-FADFLLPMLHVNQKLRASAADCLRH 383
+ L Q + E S F DF+ L + K R SAA+ L+H
Sbjct: 204 -------GQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256
Query: 384 PWLN 387
P++
Sbjct: 257 PFIK 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 87/366 (23%), Positives = 141/366 (38%), Gaps = 73/366 (19%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK--IVKSDQ-VYADTARDEIVLLKAVGRKS 85
Y ++ KLG G F V+ + ++ VALK ++ +++ + TA EI +LK + +
Sbjct: 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPN 68
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTH----ICMVFEVMGYNLLRLIARSDYKGIH 141
V+ L++ + MV M ++L L+ K
Sbjct: 69 --------------VVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTE 114
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
Q ++ + Q+LEG+NYLH I+H DIK NIL +D + ++A
Sbjct: 115 SQ-IKCYMLQLLEGINYLHEN-HILHRDIKAANIL--IDNQGILKIA------------- 157
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA- 259
DF L A + + + + TR YR E+L+G
Sbjct: 158 ---------DFGL---ARPYDG---PPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGER 202
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y A DIW C+ E+ T + GK D D L I +L G P E G +
Sbjct: 203 RYTTAVDIWGIGCVFAEMFTRRPIL---QGKS---DIDQLHLIFKLCGT-PTEETWPGWR 255
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
+L P + + Y E+ + D L +L ++ R +A+D
Sbjct: 256 SL----PGCE-----GVHSFTNYPRTLEERFGKLGP--EGLDLLSKLLSLDPYKRLTASD 304
Query: 380 CLRHPW 385
L HP+
Sbjct: 305 ALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 2e-18
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 59/274 (21%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + +G G FSTV L+ + + A+KI+ Q+ + + + K V + N H
Sbjct: 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLIARSDYKGIHIQNV 145
+I+L F+ ++ V+ Y LL+ I + Y + +
Sbjct: 63 G---------IIKLYYTFQDEEN-------LYFVLEYAPNGELLQYIRK--YGSLDEKCT 104
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
R ++L L YLH IIH D+KPENIL+ D H KI
Sbjct: 105 RFYAAEILLALEYLH-SKGIIHRDLKPENILL------------DKDMHIKI-------- 143
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWID-------DHFADEIQTRQYRSVEVLIG 258
+DF A + S ++ G+A ID FA + T +Y S E+L
Sbjct: 144 ----TDF---GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE 196
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
G ++D+W+ C+ +++ TG F + EY
Sbjct: 197 KPAGKSSDLWALGCIIYQMLTGKPPF--RGSNEY 228
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 3e-18
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 13 RPGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R + V+IGD F RY ++ +G G V ++D + VA+K + +Q
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY 126
+A A E+VL+K V K+ + N +K + D I V E+M
Sbjct: 66 HAKRAYRELVLMKCVNHKNII--GLLNVFTPQKSLEEFQDVYI----------VMELMDA 113
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 NLCQVIQME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 159
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A F
Sbjct: 160 ----------------------------------KSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ E+ G LF G ++ D ++E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIE 239
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E + + + T+R + P+ + L P L+ +E +K +AS D
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARD 296
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
L ML ++ R S + L+HP++N
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYIN 322
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 3e-18
Identities = 93/361 (25%), Positives = 154/361 (42%), Gaps = 84/361 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNV 87
+ + KLG G ++TV+ + VALK + +++ TA EI L+K +
Sbjct: 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL------ 55
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI-ARSDYKGIHIQNVR 146
E ++RL + ++ + +VFE M +L + + + V+
Sbjct: 56 --------KHENIVRLHDVIHTENK----LMLVFEYMDKDLKKYMDTHGVRGALDPNTVK 103
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG-MKLPMSL 205
+ Q+L+G+ + H + R++H D+KP+N+L+ +K G +KL
Sbjct: 104 SFTYQLLKGIAFCH-ENRVLHRDLKPQNLLI-----------------NKRGELKL---- 141
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
+DF L + I V + F++E+ T YR+ +VL+G+ Y +
Sbjct: 142 ----ADFGL----ARAFGIPV------------NTFSNEVVTLWYRAPDVLLGSRTYSTS 181
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
DIWS C+ E+ TG LF G + ++D L I ++G P E G L +
Sbjct: 182 IDIWSVGCIMAEMITGRPLF---PG---TNNEDQLLKIFRIMG-TPTESTWPGISQLPEY 234
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
P F R P L Q L D L +L +N +LR SA D L+HP
Sbjct: 235 KP--TFPRY---PPQDL-QQLFPHAD------PLGIDLLHRLLQLNPELRISAHDALQHP 282
Query: 385 W 385
W
Sbjct: 283 W 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 9e-18
Identities = 96/370 (25%), Positives = 157/370 (42%), Gaps = 89/370 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ +I ++G G + V+ + D VALK V+ D + + TA EI +L+ + ++
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI 68
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
V+ T + + DFK +VFE M ++L+ L+ S +++
Sbjct: 69 VNLKEIVTDKQDAL-----DFKKDKGA---FYLVFEYMDHDLMGLL-ESGLVHFSEDHIK 119
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ +KQ+LEGLNY H + +H DIK NIL+ K
Sbjct: 120 SFMKQLLEGLNYCHKK-NFLHRDIKCSNILL-------------NNKGQ----------- 154
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNA-CWIDDH---FADEIQTRQYRSVEVLIGAG-Y 261
+K+AD G A + + + +++ T YR E+L+G Y
Sbjct: 155 -------------------IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERY 195
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PIPK---EVLSQG 317
GPA D+WS C+ EL T +F +A +E ++ L I L G P P +V+
Sbjct: 196 GPAIDVWSCGCILGELFTKKPIF--QANQELAQ----LELISRLCGSPCPAVWPDVIK-- 247
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQ-VLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
L YF + +KP Y+ L E++ + A D D ML ++ R +
Sbjct: 248 ---LPYF---------NTMKPKKQYRRRLREEFSFIPTPALDLLD---HMLTLDPSKRCT 292
Query: 377 AADCLRHPWL 386
A + L PWL
Sbjct: 293 AEEALNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 1e-17
Identities = 94/375 (25%), Positives = 149/375 (39%), Gaps = 99/375 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSN 86
Y + K+G G + V+ + D VALK + ++ TA EI LL+ +
Sbjct: 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE--- 59
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNG-THICMVFEVMGYNLLRLI---ARSDYKGIHI 142
S ++RLL+ + +NG + +VFE + +L + + R + +
Sbjct: 60 ----------SIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPA 109
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ +++ + Q+L+G+ + H ++H D+KP+N+L VD K L
Sbjct: 110 KTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLL--VD---------------KQKGLL- 150
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLG--NACWID-DHFADEIQTRQYRSVEVLIGA 259
KIADLG A I + EI T YR+ EVL+G+
Sbjct: 151 ------------------------KIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGS 186
Query: 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y DIWS C+ E++ LF + + L HI +L+G P E + G
Sbjct: 187 THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ------QLLHIFKLLG-TPTEQVWPGV 239
Query: 319 KTLR------YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQK 372
LR + PQ R + +L P GL D L ML +
Sbjct: 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGL-------------------DLLQKMLRYDPA 280
Query: 373 LRASAADCLRHPWLN 387
R SA L HP+ +
Sbjct: 281 KRISAKAALTHPYFD 295
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-17
Identities = 87/380 (22%), Positives = 142/380 (37%), Gaps = 105/380 (27%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQ--DKTFVALKIVK---SDQVYADTARDEIVLLKAVGR 83
RY +I++LG G + V + + + ++ VA+K + S ++ A A E+ LL+
Sbjct: 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG 60
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKI---YSRNGTHICMVFEVMGYNLLRLIARSDYK-- 138
N I L D I + N ++ E+M +L ++I RS
Sbjct: 61 HKN--------------ITCLYDMDIVFPGNFNELYLYE--ELMEADLHQII-RSGQPLT 103
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
H Q + I Q+L GL Y+H+ ++H D+KP N+L+ D
Sbjct: 104 DAHFQ---SFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNAD------------------ 141
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI-------DDHFADEIQTRQYR 251
+KI D G A + + TR YR
Sbjct: 142 -------------------------CELKICDFGLARGFSENPGENAGFMTEYVATRWYR 176
Query: 252 SVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310
+ E+++ Y A D+WS C+ EL +F GK+Y D L I++++G
Sbjct: 177 APEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK---GKDYV---DQLNQILQVLGTPD 230
Query: 311 KEVLSQ--GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPML 367
+E LS+ K Y N + + A+ A D L +L
Sbjct: 231 EETLSRIGSPKAQNYIRSLPNIPKK--------------PFESIFPNANPLALDLLEKLL 276
Query: 368 HVNQKLRASAADCLRHPWLN 387
+ R S + L HP+L
Sbjct: 277 AFDPTKRISVEEALEHPYLA 296
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 82.1 bits (202), Expect = 3e-17
Identities = 95/379 (25%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 20 VQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARD 73
V++GD F RY ++ +G G V ++D VA+K + +Q +A A
Sbjct: 6 VEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 65
Query: 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
E+VL+K V K+ + S N +K + D + +V E+M NL ++I
Sbjct: 66 ELVLMKCVNHKNII--SLLNVFTPQKSLEEFQD----------VYLVMELMDANLCQVIQ 113
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 114 ME----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV---------------- 152
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251
D ++KI D G A F + TR YR
Sbjct: 153 ---------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
+ EV++G GY DIWS C+ E+ LF G++Y D ++E +G
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCP 239
Query: 312 EVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + P+ L P L+ +E +K +AS D L ML
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQARDLLSKMLV 296
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S + L+HP++N
Sbjct: 297 IDPAKRISVDEALQHPYIN 315
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 4e-17
Identities = 93/373 (24%), Positives = 142/373 (38%), Gaps = 98/373 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + V ++D + VA+K + ++A E+ LLK +
Sbjct: 16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD--- 72
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H E VI LL+ F S + + +V +MG +L ++ HIQ
Sbjct: 73 --H---------ENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQ 121
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ Q+L GL Y+H+ IIH D+KP NI +
Sbjct: 122 ---FLVYQILRGLKYIHS-AGIIHRDLKPSNIAV-------------------------- 151
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YG 262
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 152 ---------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 194
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS--QGKKT 320
DIWS C+ EL TG LF G ++ D L I+ LVG +E+L +
Sbjct: 195 QTVDIWSVGCIMAELLTGKTLF---PGSDHI---DQLKRIMNLVGTPDEELLQKISSESA 248
Query: 321 LRYF-----TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
Y P+ +F+ + D L ML ++ R
Sbjct: 249 RNYIQSLPQMPKKDFK---EVFSGANPL---------------AIDLLEKMLVLDPDKRI 290
Query: 376 SAADCLRHPWLNP 388
+AA+ L HP+L
Sbjct: 291 TAAEALAHPYLAE 303
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 80.8 bits (199), Expect = 6e-17
Identities = 98/391 (25%), Positives = 160/391 (40%), Gaps = 88/391 (22%)
Query: 15 GGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYA 68
+ VQ+ D F RY ++ +G G V ++D VA+K + +Q +A
Sbjct: 5 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 64
Query: 69 DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGY 126
A E+VLLK V K+ +I LLN F + +V E+M
Sbjct: 65 KRAYRELVLLKCVNHKN--------------IISLLNVFTPQKSLEEFQDVYLVMELMDA 110
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
NL ++I + + + + ++ Q+L G+ +LH+ IIH D+KP NI++
Sbjct: 111 NLCQVI----HMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV--------- 156
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADE 244
D ++KI D G A +F
Sbjct: 157 ----------------------------------KSDCTLKILDFGLARTACTNFMMTPY 182
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
+ TR YR+ EV++G GY DIWS C+ EL G +F G ++ D ++E
Sbjct: 183 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ---GTDHI---DQWNKVIE 236
Query: 305 LVGPIPKEVLSQGKKTLRYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+G E +++ + T+R + PQ + L P ++ +E+ K + S D
Sbjct: 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESER---DKLKTSQARD 293
Query: 362 FLLPMLHVNQKLRASAADCLRHP----WLNP 388
L ML ++ R S + LRHP W +P
Sbjct: 294 LLSKMLVIDPDKRISVDEALRHPYITVWYDP 324
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 7e-17
Identities = 85/368 (23%), Positives = 141/368 (38%), Gaps = 95/368 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+Y + +G G + V + VA+K + D++ A EI +LK +
Sbjct: 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL---- 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
E ++ L+ F+ R + +VFE + + +L + + G+ V
Sbjct: 58 ----------RHENLVNLIEVFRRKKR----LYLVFEFVDHTVLDDLEKYP-NGLDESRV 102
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
R + Q+L G+ + H+ IIH DIKPENIL V V
Sbjct: 103 RKYLFQILRGIEFCHSH-NIIHRDIKPENIL--VSQSGV--------------------- 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG-AGY 261
VK+ D G A + + + D + TR YR+ E+L+G Y
Sbjct: 139 --------------------VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKY 178
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
G A DIW+ C+ E+ TG+ LF P D D L HI++ +G L + +
Sbjct: 179 GRAVDIWAVGCLVTEMLTGEPLF-PG-----DSDIDQLYHIIKCLGN-----LIPRHQEI 227
Query: 322 RYFTPQGNFRR---IDNLKPWGLYQVLTEKY-HWSKAEASDFADFLLPMLHVNQKLRASA 377
P R + ++P L +++ S D L ++ R S+
Sbjct: 228 FQKNPLFAGMRLPEVKEIEP------LEKRFPKLSGL----VLDLAKQCLRIDPDDRPSS 277
Query: 378 ADCLRHPW 385
+ L H +
Sbjct: 278 SQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 8e-17
Identities = 91/369 (24%), Positives = 149/369 (40%), Gaps = 97/369 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKS--DQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + V+ + + VA+K V+S D V A EI +LK +
Sbjct: 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL---- 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
K L+N +++ R + +VFE + +L + ++ +G+ +
Sbjct: 58 -------------KHPNLVNLIEVFRRK-RKLHLVFEYCDHTVLNELEKNP-RGVPEHLI 102
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ II Q L+ +N+ H IH D+KPENIL+ TK +I
Sbjct: 103 KKIIWQTLQAVNFCHKH-NCIHRDVKPENILI--------------TKQGQI-------- 139
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG-AGY 261
K+ D G A + D + D + TR YR+ E+L+G Y
Sbjct: 140 ---------------------KLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQY 178
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG---PIPKEVLSQGK 318
GP D+W+ C+ EL TG L+ K+ D D L I + +G P +++ S +
Sbjct: 179 GPPVDVWAIGCVFAELLTGQPLWPGKS------DVDQLYLIRKTLGDLIPRHQQIFSTNQ 232
Query: 319 --KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
K L P+ +P L K+ +S FL L ++ R S
Sbjct: 233 FFKGLSIPEPE-------TREP------LESKF---PNISSPALSFLKGCLQMDPTERLS 276
Query: 377 AADCLRHPW 385
+ L HP+
Sbjct: 277 CEELLEHPY 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 4e-16
Identities = 86/370 (23%), Positives = 131/370 (35%), Gaps = 110/370 (29%)
Query: 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD--------EIVLLKAVGRKSN 86
++G G + V+ + D VALK V+ D RD EI LL + R N
Sbjct: 14 RIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-----RDGIPISSLREITLLLNL-RHPN 67
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY---NLLRLIARSDYKGIHIQ 143
+ + E V+ G H+ +F VM Y +L L+ +
Sbjct: 68 I------VELKEVVV------------GKHLDSIFLVMEYCEQDLASLL-DNMPTPFSES 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V+ ++ Q+L GL YLH IIH D+K N+L+
Sbjct: 109 QVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLL---------------TDKGC------ 146
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD---EIQTRQYRSVEVLIGA- 259
+KIAD G A ++ T YR+ E+L+G
Sbjct: 147 ----------------------LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCT 184
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y A D+W+ C+ EL L K+ E L I++L+G P E + G
Sbjct: 185 TYTTAIDMWAVGCILAELLAHKPLLPGKSEIE------QLDLIIQLLGT-PNESIWPG-- 235
Query: 320 TLRYFTPQGNFRRIDNLKPWGL----YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
F + + + L Y L K+ W +FLL + K RA
Sbjct: 236 ----------FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMY---DPKKRA 282
Query: 376 SAADCLRHPW 385
+A + L +
Sbjct: 283 TAEEALESSY 292
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 77.0 bits (189), Expect = 7e-16
Identities = 91/361 (25%), Positives = 154/361 (42%), Gaps = 82/361 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
++ V+ +G G + V + K VA+K K +++V T R E+ +L+
Sbjct: 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLR-ELKMLR----- 55
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
T E ++ L F+ R G + +VFE + N+L L+ G+ +
Sbjct: 56 ---------TLKQENIVELKEAFR---RRGK-LYLVFEYVEKNMLELLEEMP-NGVPPEK 101
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
VR+ I Q+++ +++ H I+H DIKPEN+L+ + D K
Sbjct: 102 VRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHN---------DVLK----------- 140
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
+ DF +E G+ + ++ + + TR YRS E+L+GA YG A
Sbjct: 141 ----LCDFGFARNLSE-----------GS----NANYTEYVATRWYRSPELLLGAPYGKA 181
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
D+WS C+ EL+ G LF ++ + D L I +++GP+P E + L Y
Sbjct: 182 VDMWSVGCILGELSDGQPLFPGES------EIDQLFTIQKVLGPLPAEQMK-----LFYS 230
Query: 325 TPQGNFRRIDNLK-PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
P+ + R + P Q L +Y + D + +L +N R CL H
Sbjct: 231 NPRFHGLRFPAVNHP----QSLERRYL--GILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284
Query: 384 P 384
P
Sbjct: 285 P 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 1e-15
Identities = 96/374 (25%), Positives = 145/374 (38%), Gaps = 89/374 (23%)
Query: 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTAR--DEIVLLKAVGRKSNV 87
R +G+G F VW D +D VALK + Q R E+ +L + NV
Sbjct: 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKML-CFFKHDNV 61
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
S+ Q ++ F+ I +V E+M +L ++I + + +V+
Sbjct: 62 LSALDILQPP-----HIDPFE-------EIYVVTELMQSDLHKIIVSP--QPLSSDHVKV 107
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILM---CVDYDKVRRMARDATKHHKIGMKLPMS 204
+ Q+L GL YLH+ I+H DIKP N+L+ CV
Sbjct: 108 FLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNCV------------------------- 141
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNA-CWIDD---HFADEIQTRQYRSVEVLIGAG 260
+KI D G A D H E+ T+ YR+ E+L+G+
Sbjct: 142 ---------------------LKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSR 180
Query: 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y A DIWS C+ EL LF ++ + L I +L+G E + +
Sbjct: 181 HYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ------QLDLITDLLGTPSLEAMRSACE 234
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
R +G + LY + ++ H EA L ML + R SAAD
Sbjct: 235 GARAHILRGPHKPPSLPV---LYTLSSQATH----EA---VHLLCRMLVFDPDKRISAAD 284
Query: 380 CLRHPWLNPRRSHY 393
L HP+L+ R Y
Sbjct: 285 ALAHPYLDEGRLRY 298
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 1e-15
Identities = 94/376 (25%), Positives = 141/376 (37%), Gaps = 100/376 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSN 86
RY + +G G + V + VA+K + Q + EI +L+
Sbjct: 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK---- 61
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTH-ICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
H E +I +L+ + S + + +V E+M +L +LI HIQ
Sbjct: 62 -H---------ENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSNDHIQ-- 109
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ Q+L GL Y+H+ ++H D+KP N+L+
Sbjct: 110 -YFLYQILRGLKYIHS-ANVLHRDLKPSNLLL---------------------------- 139
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWID---DH--FADE-IQTRQYRSVEV-LIG 258
N D +KI D G A D DH F E + TR YR+ E+ L
Sbjct: 140 -------------NTNCD--LKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNS 184
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
GY A DIWS C+ E+ + LF GK+Y L I+ ++G
Sbjct: 185 KGYTKAIDIWSVGCILAEMLSNRPLF---PGKDYL---HQLNLILGVLG----------- 227
Query: 319 KTLRYFTP-QGNFRRIDNLKPWGLYQVL--TEKYHWSK--AEASDFA-DFLLPMLHVNQK 372
TP Q + I +L+ + L K W+K A A D L ML N
Sbjct: 228 ------TPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPH 281
Query: 373 LRASAADCLRHPWLNP 388
R + + L HP+L
Sbjct: 282 KRITVEEALAHPYLEQ 297
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 1e-15
Identities = 76/357 (21%), Positives = 124/357 (34%), Gaps = 101/357 (28%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-RDEIVLLKAVGRKSNVHSS 90
+ +LG G+ V +A+K ++ + + A + +I+ + K N
Sbjct: 5 YLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI---NEAIQKQILRELDILHKCN---- 57
Query: 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIK 150
S ++ F Y+ ICM E M L I + I + + I
Sbjct: 58 ------SPYIVGFYGAF--YNNGDISICM--EYMDGGSLDKILKEVQGRIPERILGKIAV 107
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
VL+GL YLH + +IIH D+KP NIL+ + + +KL
Sbjct: 108 AVLKGLTYLHEKHKIIHRDVKPSNILV----------------NSRGQIKL--------C 143
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWST 270
DF +S ++ ++ + T Y + E + G Y +DIWS
Sbjct: 144 DFG----------VSGQL--------VNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSL 185
Query: 271 ACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330
ELATG + + P + L +IV P P+ P G F
Sbjct: 186 GLSLIELATGRFPY-PPENDPPDGIFELLQYIVN--EPPPR-------------LPSGKF 229
Query: 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
+ DF DF+ L + + R S + L HP++
Sbjct: 230 -------------------------SPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 75.9 bits (186), Expect = 3e-15
Identities = 93/364 (25%), Positives = 147/364 (40%), Gaps = 84/364 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + + VA+K + ++A E+ LLK +
Sbjct: 16 RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM---- 71
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + N + +V +MG +L ++ H+Q
Sbjct: 72 ----------KHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQ 121
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 122 ---FLIYQLLRGLKYIHS-AGIIHRDLKPSNVAV-------------------------- 151
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D ++I D G A DD + TR YR+ E+++ Y
Sbjct: 152 ---------------NE--DCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYN 194
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL G LF G +Y D L I+E+VG EVL +
Sbjct: 195 QTVDIWSVGCIMAELLKGKALF---PGNDYI---DQLKRIMEVVGTPSPEVLKK------ 242
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ + + I +L P Q L + + + A D L ML ++ R SA++ L
Sbjct: 243 -ISSEHARKYIQSL-PHMPQQDLKKIFRGANPLA---IDLLEKMLVLDSDKRISASEALA 297
Query: 383 HPWL 386
HP+
Sbjct: 298 HPYF 301
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 3e-15
Identities = 89/361 (24%), Positives = 142/361 (39%), Gaps = 69/361 (19%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G + V ++D VA+K VK + ++ + L+ G +H + T
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIE-ISNDVTKDRQLVGMCG----IH---FTTL 68
Query: 96 ASEKVIRLLNDFKIYSR-----NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIK 150
K++ + I G I +V ++M +L +++ R + V+ I+
Sbjct: 69 RELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIR--LTESQVKCILL 126
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q+L GLN LH + +H D+ P NI + ++ KI
Sbjct: 127 QILNGLNVLH-KWYFMHRDLSPANIFI------------NSKGICKIA------------ 161
Query: 211 DFSLLDPANEVYD-ISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAADIW 268
DF L Y S ++ + ++ T YR+ E+L+GA Y A D+W
Sbjct: 162 DFGL--ARRYGYPPYSDTLSKDETMQ-RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMW 218
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY--FTP 326
S C+ EL TG LF P + D L I EL+G ++ Q KK Y FTP
Sbjct: 219 SVGCIFAELLTGKPLF-PGEN-----EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTP 272
Query: 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
+ KP L + + D D L +L +N R SA + L+H +
Sbjct: 273 R---------KPKDLKTIF-------PNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316
Query: 387 N 387
Sbjct: 317 K 317
|
Length = 335 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 6e-15
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 71/271 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
+ V++KLG G + +V+ L D F ALK V S + D +EI +L +V
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAV-NEIRILASV--- 56
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKG--IH 141
++ + +Y E + +G +C+V E +L + I++ K I
Sbjct: 57 NHPNIISYK----EAFL-----------DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIP 101
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
Q + I Q+L GL LH Q +I+H D+K NIL+ +
Sbjct: 102 EQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVANDL------------------- 141
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD-EIQTRQYRSVEVLIGAG 260
VKI DLG + + + A +I T Y + EV G
Sbjct: 142 ------------------------VKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRP 177
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKE 291
Y +DIWS C+ +E+AT F+ ++ ++
Sbjct: 178 YSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 73.3 bits (181), Expect = 7e-15
Identities = 59/267 (22%), Positives = 104/267 (38%), Gaps = 73/267 (27%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+Y +I+++G G F V+L D LK + + + A +E+ +LK + +
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL---N 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLIARSDYKGIH 141
+ + +I+ F+ +C+ VM Y +L + I + +G
Sbjct: 58 HPN-----------IIKYYESFE----EKGKLCI---VMEYADGGDLSQKIKKQKKEGKP 99
Query: 142 IQNVRTIIK---QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
I+ Q+ L YLH++ +I+H DIKP+NI + + K+G
Sbjct: 100 FP-EEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLT------------SNGLVKLG 145
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
DF + + V +V DL + T Y S E+
Sbjct: 146 ------------DFGI---SK-VLSSTV---DLAKTV---------VGTPYYLSPELCQN 177
Query: 259 AGYGPAADIWSTACMAFELATGDYLFD 285
Y +DIWS C+ +EL T + F+
Sbjct: 178 KPYNYKSDIWSLGCVLYELCTLKHPFE 204
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 9e-15
Identities = 88/374 (23%), Positives = 146/374 (39%), Gaps = 108/374 (28%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSN 86
Y + K+G G + V+ + D VALK ++ + TA EI LLK + N
Sbjct: 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPN 59
Query: 87 VHSSAYNTQASEKVIRLLN----DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ +RLL+ + K+Y +VFE + +L + + S G+
Sbjct: 60 I-------------VRLLDVVHSENKLY--------LVFEFLDLDLKKYMDSSPLTGLDP 98
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+++ + Q+L+G+ Y H+ R++H D+KP+N+L +D + ++A
Sbjct: 99 PLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLL--IDREGALKLA-------------- 141
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-Y 261
DF L + + V+ + E+ T YR+ E+L+G+ Y
Sbjct: 142 --------DFGLA----RAFGVPVRT------------YTHEVVTLWYRAPEILLGSRQY 177
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
DIWS C+ E+ LF G + D L I +G P E + G +L
Sbjct: 178 STPVDIWSIGCIFAEMVNRRPLF---PGDS---EIDQLFRIFRTLG-TPDEDVWPGVTSL 230
Query: 322 RYFTPQGNFRR---------IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQK 372
+ P F + + NL GL D L ML +
Sbjct: 231 PDYKPT--FPKWARQDLSKVVPNLDEDGL-------------------DLLSKMLVYDPA 269
Query: 373 LRASAADCLRHPWL 386
R SA L+HP+
Sbjct: 270 KRISAKAALQHPYF 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 1e-14
Identities = 85/362 (23%), Positives = 136/362 (37%), Gaps = 100/362 (27%)
Query: 39 GHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEI-VLLKAVGRKSNVHSSAYNT 94
G + V+ + D + VALK +K ++ + T+ EI +LLK + N+
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL--QHPNI------V 67
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLE 154
E V+ N I MV E + ++L L+ V+ ++ Q+L
Sbjct: 68 TVKEVVV---------GSNLDKIYMVMEYVEHDLKSLMETMKQ-PFLQSEVKCLMLQLLS 117
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
G+ +LH I+H D+K N+L+ +++ +K+ DF L
Sbjct: 118 GVAHLH-DNWILHRDLKTSNLLL----------------NNRGILKI--------CDFGL 152
Query: 215 LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAADIWSTACM 273
A E + + T YR+ E+L+GA Y A D+WS C+
Sbjct: 153 ---AREYGSPL-------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCI 196
Query: 274 AFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-------PIPKEVLSQGKKTLRYFTP 326
EL T LF K+ + D L I +L+G P E+ KKT + P
Sbjct: 197 FAELLTKKPLFPGKS------EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKY-P 249
Query: 327 QGNFRR---IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
R+ +L G D L +L + R SA D L+H
Sbjct: 250 YNQLRKKFPALSLSDNGF-------------------DLLNRLLTYDPAKRISAEDALKH 290
Query: 384 PW 385
P+
Sbjct: 291 PY 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 2e-14
Identities = 52/250 (20%), Positives = 94/250 (37%), Gaps = 64/250 (25%)
Query: 39 GHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQA-S 97
G + V+L+ A+K++K K+++ Q +
Sbjct: 4 GAYGRVFLAKKKSTGDIYAIKVIK---------------------KADMIRKNQVDQVLT 42
Query: 98 EKVI--RLLNDFKI---YSRNGTH-ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIK 150
E+ I + + + + YS G + +V E + G +L L+ + + R I
Sbjct: 43 ERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLL--ENVGSLDEDVARIYIA 100
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
+++ L YLH IIH D+KP+NIL+ D+ H K+ D +S
Sbjct: 101 EIVLALEYLH-SNGIIHRDLKPDNILI------------DSNGHLKL-------TDFGLS 140
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWST 270
L+ + D + + + T Y + EV++G G+ D WS
Sbjct: 141 KVGLVRRQINLNDDEKEDKRI-------------VGTPDYIAPEVILGQGHSKTVDWWSL 187
Query: 271 ACMAFELATG 280
C+ +E G
Sbjct: 188 GCILYEFLVG 197
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 2e-14
Identities = 84/374 (22%), Positives = 134/374 (35%), Gaps = 136/374 (36%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y + K+G G V+ + D VA+K ++ + + +EI+++K H
Sbjct: 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMK-----DCKH- 74
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTI 148
++ + + + G + +V E M G +L +I ++ + Q + +
Sbjct: 75 --------PNIVDYYDSYLV----GDELWVVMEYMDGGSLTDIITQNFVRMNEPQ-IAYV 121
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
++VL+GL YLH+Q +IH DIK +NIL +
Sbjct: 122 CREVLQGLEYLHSQ-NVIHRDIKSDNIL--------------------LSK--------- 151
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR--SV---------EVLI 257
D SVK+AD G FA ++ + + SV EV+
Sbjct: 152 --------------DGSVKLADFG--------FAAQLTKEKSKRNSVVGTPYWMAPEVIK 189
Query: 258 GAGYGPAADIWSTACMAFELATGD--YLFDP--KAGKEYSRDDDHLAHIVELVGPIPKEV 313
YGP DIWS M E+A G+ YL +P +A L I IP
Sbjct: 190 RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA----------LFLITT--KGIPP-- 235
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
L WS +F DFL L + +
Sbjct: 236 -------------------------------LKNPEKWSP----EFKDFLNKCLVKDPEK 260
Query: 374 RASAADCLRHPWLN 387
R SA + L+HP+L
Sbjct: 261 RPSAEELLQHPFLK 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 2e-14
Identities = 94/363 (25%), Positives = 151/363 (41%), Gaps = 84/363 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV--KSDQVYADTARDEIVLLKAVGRKSNV 87
Y + KLG G ++TV+ + VALK++ K+++ TA E LLK + + +N
Sbjct: 7 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-KHAN- 64
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
I LL+D I+++ + VFE M +L + + + G+H NVR
Sbjct: 65 -------------IVLLHDI-IHTKET--LTFVFEYMHTDLAQYMIQHP-GGLHPYNVRL 107
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ Q+L GL Y+H Q I+H D+KP+N+L+ S
Sbjct: 108 FMFQLLRGLAYIHGQ-HILHRDLKPQNLLI-----------------------------S 137
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNA---CWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263
+ + +K+AD G A ++ E+ T YR +VL+GA Y
Sbjct: 138 YLGE--------------LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSS 183
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
A DIW C+ E+ G F G S + L I ++G +P E G L
Sbjct: 184 ALDIWGAGCIFIEMLQGQPAF---PG--VSDVFEQLEKIWTVLG-VPTEDTWPGVSKLPN 237
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
+ P+ +V+ ++ S+ ++ D ML + K R SA D L H
Sbjct: 238 YKPE-----WFLPCKPQQLRVVWKRL--SRPPKAE--DLASQMLMMFPKDRISAQDALLH 288
Query: 384 PWL 386
P+
Sbjct: 289 PYF 291
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 5e-14
Identities = 90/363 (24%), Positives = 148/363 (40%), Gaps = 84/363 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLKAVGRKSNV 87
Y + KLG G ++TV+ VALK ++ + TA E LLK + + +N
Sbjct: 7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHAN- 64
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
I L+D I+++ + +VFE + +L + + G+ + NVR
Sbjct: 65 -------------IVTLHDI-IHTK--KTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRL 107
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ Q+L GL Y H + R++H D+KP+N+L
Sbjct: 108 FLFQLLRGLAYCHQR-RVLHRDLKPQNLL------------------------------- 135
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDH-FADEIQTRQYRSVEVLIGA-GYGP 263
+S+ L K+AD G A + +++E+ T YR +VL+G+ Y
Sbjct: 136 -ISERGEL-----------KLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYST 183
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
+ D+W C+ +E+ATG LF P + + +D L I ++G P E G +
Sbjct: 184 SLDMWGVGCIFYEMATGRPLF-PGS----TDVEDQLHKIFRVLG-TPTEETWPGVSSNPE 237
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
F P +F P L E + L L K R SAA+ ++H
Sbjct: 238 FKP-YSFPF---YPPRPLINHAPRLDRIPHGE-----ELALKFLQYEPKKRISAAEAMKH 288
Query: 384 PWL 386
P+
Sbjct: 289 PYF 291
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 1e-13
Identities = 80/319 (25%), Positives = 124/319 (38%), Gaps = 94/319 (29%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVK--------SDQVYADTARDEIVLLKAVGRKSNV 87
LG G FS+ + + D++ T +A+K V ++V + R EI L+
Sbjct: 8 LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVV-EALRKEIRLM--------- 57
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVR 146
+IR+L + +H + E M G ++ L+ S Y +
Sbjct: 58 -----ARLNHPHIIRMLGA----TCEDSHFNLFVEWMAGGSVSHLL--SKYGAFKEAVII 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+Q+L GL+YLH +IIH D+K N+L+ D+T
Sbjct: 107 NYTEQLLRGLSYLHEN-QIIHRDVKGANLLI------------DSTGQR----------- 142
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQ-----TRQYRSVEVLIGA 259
++IAD G A + A E Q T + + EVL G
Sbjct: 143 -------------------LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE 183
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-----PIPKEVL 314
YG + D+WS C+ E+AT P +++S +HLA I ++ IP E L
Sbjct: 184 QYGRSCDVWSVGCVIIEMATAK---PPWNAEKHS---NHLALIFKIASATTAPSIP-EHL 236
Query: 315 SQGKK--TLRYFTPQGNFR 331
S G + TLR Q R
Sbjct: 237 SPGLRDVTLRCLELQPEDR 255
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 1e-13
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 98/365 (26%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHS 89
+ K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 60
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+++LL+ I++ N + +VFE + +L + + S GI + +++ +
Sbjct: 61 ----------IVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASPLSGIPLPLIKSYL 106
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
Q+L+GL + H+ R++H D+KP+N+L+ + K +
Sbjct: 107 FQLLQGLAFCHSH-RVLHRDLKPQNLLI------------NTEGAIK------------L 141
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPAADIW 268
+DF L + + V+ + E+ T YR+ E+L+G Y A DIW
Sbjct: 142 ADFGLA----RAFGVPVRT------------YTHEVVTLWYRAPEILLGCKYYSTAVDIW 185
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328
S C+ E+ T LF + + D L I +G P EV+ G +L + P
Sbjct: 186 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLG-TPDEVVWPGVTSLPDYKP-- 236
Query: 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA--------DFLLPMLHVNQKLRASAADC 380
+F + W++ + S D L MLH + R SA
Sbjct: 237 SFPK------------------WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAA 278
Query: 381 LRHPW 385
L HP+
Sbjct: 279 LAHPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 2e-13
Identities = 81/375 (21%), Positives = 126/375 (33%), Gaps = 138/375 (36%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-----IVKSDQVYADTARDEIVLLKAVGR 83
Y + +G G F V+ +L+ FVA+K +K + + + EI LLK +
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEAL--KSIMQEIDLLKNLKH 58
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHI 142
+ V K I + ++ E +L ++I + +
Sbjct: 59 PNIV-----------KYIG-------SIETSDSLYIILEYAENGSLRQIIKKFGPFPESL 100
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
V + QVL+GL YLH Q +IH DIK NIL TK
Sbjct: 101 --VAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILT--------------TK--------- 134
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV--------- 253
D VK+AD G A ++D ++ SV
Sbjct: 135 --------------------DGVVKLADFGVATKLND------VSKDDASVVGTPYWMAP 168
Query: 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
EV+ +G A+DIWS C EL L G P
Sbjct: 169 EVIEMSGASTASDIWSLGCTVIEL---------------------------LTGNPP--- 198
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWG-LYQVLTEKYHWSKAEAS-DFADFLLPMLHVNQ 371
Y+ +L P L++++ + + S + DFL+ +
Sbjct: 199 ---------YY----------DLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDP 239
Query: 372 KLRASAADCLRHPWL 386
LR +A L+HPW+
Sbjct: 240 NLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 4e-13
Identities = 88/370 (23%), Positives = 143/370 (38%), Gaps = 86/370 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKS 85
+Y + K+G G F V+ + + K VALK V + + TA EI +L+ +
Sbjct: 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKH-- 70
Query: 86 NVHSSAYNTQASEKVIRLL----NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
E V+ L+ Y+R +VFE ++L L++ + K
Sbjct: 71 ------------ENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK-FT 117
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ ++ ++K +L GL Y+H +I+H D+K NIL + D + ++A
Sbjct: 118 LSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANIL--ITKDGILKLA------------- 161
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-G 260
DF L S+ N + + + T YR E+L+G
Sbjct: 162 ---------DFGLARA------FSLSKNSKPN------RYTNRVVTLWYRPPELLLGERD 200
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
YGP D+W C+ E+ T + + + + L I +L G I EV G
Sbjct: 201 YGPPIDMWGAGCIMAEMWTRSPIM------QGNTEQHQLTLISQLCGSITPEVWP-GVDK 253
Query: 321 LRYFT----PQGNFRRI-DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
L F PQG R++ + LKP+ A D D L L ++ R
Sbjct: 254 LELFKKMELPQGQKRKVKERLKPY-----------VKDPHALDLIDKL---LVLDPAKRI 299
Query: 376 SAADCLRHPW 385
A L H +
Sbjct: 300 DADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 4e-13
Identities = 69/260 (26%), Positives = 102/260 (39%), Gaps = 66/260 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK---IVKSDQVYADTARDEIVLLKAVGRKS 85
R+ K+G G F V+ + +L +A+K I +D DE+ +L+ + +
Sbjct: 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN 60
Query: 86 NVHSSAYNTQA-SEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V Y + EKV F Y GT L ++ I ++
Sbjct: 61 LV--KYYGVEVHREKV----YIFMEYCSGGT---------------LEELLEHGRILDEH 99
Query: 145 V-RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V R Q+LEGL YLH I+H DIKP NI + D++ V +KL
Sbjct: 100 VIRVYTLQLLEGLAYLH-SHGIVHRDIKPANIFL--DHNGV--------------IKL-- 140
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA---G 260
DF +VK+ + + T Y + EV+ G G
Sbjct: 141 ------GDFG----------CAVKLKNNTTTM--GEEVQSLAGTPAYMAPEVITGGKGKG 182
Query: 261 YGPAADIWSTACMAFELATG 280
+G AADIWS C+ E+ATG
Sbjct: 183 HGRAADIWSLGCVVLEMATG 202
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 4e-13
Identities = 79/360 (21%), Positives = 132/360 (36%), Gaps = 111/360 (30%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ KLG G + +V+ + + VA+K+V ++ + + EI +LK
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIK-EISILK---------- 53
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
S +++ + Y +N T + +V E G + I + K + + + I+
Sbjct: 54 ---QCD-SPYIVKY---YGSYFKN-TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL 105
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
Q L+GL YLH+ + IH DIK NIL+
Sbjct: 106 YQTLKGLEYLHSN-KKIHRDIKAGNILL-------------------------------- 132
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEVLIGAGYGPAAD 266
NE + K+AD G + + D A I T + + EV+ GY AD
Sbjct: 133 ---------NE--EGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKAD 181
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326
IWS A E+A G P + H + + IP + P
Sbjct: 182 IWSLGITAIEMAEG---KPPYSD----------IHPMRAIFMIPNK------------PP 216
Query: 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
L++ WS +F DF+ L + + R SA L+HP++
Sbjct: 217 PT----------------LSDPEKWSP----EFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 5e-13
Identities = 81/368 (22%), Positives = 141/368 (38%), Gaps = 76/368 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTARDEIVLLKAVGRKSNV 87
RY +R LG G V+ + D VA+K IV +D A EI +++ + + V
Sbjct: 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIV 65
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
Y L D + + + +V E M +L ++ + H R
Sbjct: 66 --KVYEVLGP-SGSDLTEDVGSLTELNS-VYIVQEYMETDLANVLEQGPLSEEHA---RL 118
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ Q+L GL Y+H+ ++H D+KP N+ + +
Sbjct: 119 FMYQLLRGLKYIHS-ANVLHRDLKPANVFINTE--------------------------- 150
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE------IQTRQYRSVEVLIGA-G 260
D+ +KI D G A +D H++ + + T+ YRS +L+
Sbjct: 151 ---------------DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNN 195
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y A D+W+ C+ E+ TG LF AG + + + + I+E V + +E ++
Sbjct: 196 YTKAIDMWAAGCIFAEMLTGKPLF---AG---AHELEQMQLILESVPVVREEDRNELLNV 249
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+ F + L + EA DFL +L N R +A +
Sbjct: 250 IPSFVRNDG---------GEPRRPLRDLLPGVNPEA---LDFLEQILTFNPMDRLTAEEA 297
Query: 381 LRHPWLNP 388
L HP+++
Sbjct: 298 LMHPYMSC 305
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 5e-13
Identities = 75/273 (27%), Positives = 109/273 (39%), Gaps = 59/273 (21%)
Query: 118 CMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
CMV +L + + + I I KQ+LEGL YLH Q RIIH D+K ENI +
Sbjct: 133 CMVLPHYSSDLYTYLTKRSRP-LPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFI 190
Query: 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI 237
D D+V IG D + F ++ P A LG
Sbjct: 191 -NDVDQV-----------CIG-------DLGAAQFPVVAP-----------AFLG----- 215
Query: 238 DDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFE-LATGDYLFD--PKAGKEYSR 294
A ++T + EVL Y ADIWS + FE LA +F+ P +EY +
Sbjct: 216 ---LAGTVET---NAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK 269
Query: 295 D-DDHLAHIVELVGPIPKEVLSQ-GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS 352
HL I+ + P+E G + +R F + R +P+ Y
Sbjct: 270 SCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLER----QPYTRYPCF------Q 319
Query: 353 KAEASDFADFLL-PMLHVNQKLRASAADCLRHP 384
+ +FL+ ML + +R SA + L +P
Sbjct: 320 RVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYP 352
|
Length = 357 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.5 bits (166), Expect = 6e-13
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 41/141 (29%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
R +++ L YLH+ II+ D+KPENIL+ DA H K+
Sbjct: 95 ARFYAAEIVLALEYLHSL-GIIYRDLKPENILL------------DADGHIKL------- 134
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
+DF L + +++ G+ T +Y + EVL+G GYG A
Sbjct: 135 -----TDFGL----------AKELSSEGSRTN------TFCGTPEYLAPEVLLGKGYGKA 173
Query: 265 ADIWSTACMAFELATGDYLFD 285
D WS + +E+ TG F
Sbjct: 174 VDWWSLGVLLYEMLTGKPPFY 194
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 7e-13
Identities = 79/342 (23%), Positives = 138/342 (40%), Gaps = 84/342 (24%)
Query: 69 DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR---------LLNDFKIYSRNGTHICM 119
DT + V +K + +V + A T K++R + + + + + +
Sbjct: 26 DTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV 85
Query: 120 VFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179
V ++M +L +I SD + + +++R + Q+L GL Y+H+ +IH D+KP N+L+
Sbjct: 86 VMDLMESDLHHII-HSD-QPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLV-- 140
Query: 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID- 238
NE D ++I D G A +
Sbjct: 141 ---------------------------------------NE--DCELRIGDFGMARGLSS 159
Query: 239 ---DH--FADE-IQTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKE 291
+H F E + TR YR+ E+L+ Y A D+WS C+ E+ LF GK
Sbjct: 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLF---PGKN 216
Query: 292 YSRDDDHLAHIVELVGPIPKEVLSQ--GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349
Y L I+ ++G +EVL++ + +Y N R + PW ++ +
Sbjct: 217 YV---HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ---NLPRKQPV-PW------SKIF 263
Query: 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391
+ EA D L ML + + R + L+HP+L
Sbjct: 264 PKASPEA---LDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 9e-13
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 55/267 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ VI+ +G G F VWL D A+K+++ + R++I ++A + ++
Sbjct: 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM---IKRNQIAHVRA---ERDIL 55
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRT 147
+ A S +++L F+ + H+ +V E M G +L+ L+ R D R
Sbjct: 56 ADA----DSPWIVKLYYSFQ----DEEHLYLVMEYMPGGDLMNLLIRKDVFPEET--ARF 105
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
I +++ L+ +H IH DIKP+NIL+ DA H K+
Sbjct: 106 YIAELVLALDSVHKL-GFIHRDIKPDNILI------------DADGHIKL---------- 142
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTR----------QYRSVE 254
+DF L N+ D + D N + D+ D Q R Y + E
Sbjct: 143 --ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE 200
Query: 255 VLIGAGYGPAADIWSTACMAFELATGD 281
VL G YG D WS + +E+ G
Sbjct: 201 VLRGTPYGLECDWWSLGVILYEMLYGF 227
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 84/362 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + TV+ + + + VALK V+ D+ +A EI LLK + K+
Sbjct: 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V Y+ S+K + +VFE +L + + I + V
Sbjct: 61 IVR--LYDVLHSDK----------------KLTLVFEYCDQDLKKYFDSCNGD-IDPEIV 101
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ + Q+L+GL + H+ ++H D+KP+N+L+ + + +KL
Sbjct: 102 KSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNGE----------------LKL---- 140
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
+DF L + I V+ ++ E+ T YR +VL GA Y +
Sbjct: 141 ----ADFGLARA----FGIPVR------------CYSAEVVTLWYRPPDVLFGAKLYSTS 180
Query: 265 ADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+WS C+ ELA G LF G + DD L I L+G P E G L
Sbjct: 181 IDMWSAGCIFAELANAGRPLF---PGNDV---DDQLKRIFRLLG-TPTEESWPGVSKL-- 231
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
+ KP+ +Y T + S D L +L N R SA + L+H
Sbjct: 232 ----------PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281
Query: 384 PW 385
P+
Sbjct: 282 PY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 2e-12
Identities = 72/251 (28%), Positives = 104/251 (41%), Gaps = 65/251 (25%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNT 94
LG G + V+ + DL + +A+K I + D Y +EI L + ++ V Y
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQ---YLG 72
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII---KQ 151
SE FKI+ +V G +L L+ RS + G N +TII KQ
Sbjct: 73 SDSEN-----GFFKIFME---------QVPGGSLSALL-RSKW-GPLKDNEQTIIFYTKQ 116
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
+LEGL YLH +I+H DIK +N+L+ Y V +++ T G
Sbjct: 117 ILEGLKYLHDN-QIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAG------------- 161
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA--GYGPAADIWS 269
++P E + T QY + EV+ GYG ADIWS
Sbjct: 162 ---INPCTETF----------------------TGTLQYMAPEVIDKGPRGYGAPADIWS 196
Query: 270 TACMAFELATG 280
C E+ATG
Sbjct: 197 LGCTIVEMATG 207
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 3e-12
Identities = 61/261 (23%), Positives = 98/261 (37%), Gaps = 75/261 (28%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI-VLLKAVGRKSNV 87
+ ++ +G G F V+ + D + VA+K++ + A DEI + + + S
Sbjct: 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFLSQC 56
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQ 143
S Y T+ L K++ I M E G +LL+ +
Sbjct: 57 RSP-YITKYYGSF---LKGSKLW------IIM--EYCGGGSCLDLLK------PGKLDET 98
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ I+++VL GL YLH + IH DIK NIL+ + D
Sbjct: 99 YIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEGD--------------------- 136
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---DEIQTRQYRSVEVLIGAG 260
VK+AD G + + + + T + + EV+ +G
Sbjct: 137 ----------------------VKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSG 174
Query: 261 YGPAADIWSTACMAFELATGD 281
Y ADIWS A ELA G+
Sbjct: 175 YDEKADIWSLGITAIELAKGE 195
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 4e-12
Identities = 94/373 (25%), Positives = 146/373 (39%), Gaps = 95/373 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY ++++G G + +V + D + VA+K + +++A A E+ LLK +
Sbjct: 16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQH-- 73
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI--Q 143
E VI LL+ F + +G + VM Y L G +
Sbjct: 74 ------------ENVIGLLDVF-TSAVSGDEFQDFYLVMPYMQTDL---QKIMGHPLSED 117
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V+ ++ Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 118 KVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAV-------------------------- 150
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D +KI D G A D + TR YR+ EV++ Y
Sbjct: 151 ---------------NE--DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYN 193
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PIPKEVLSQGKKTL 321
DIWS C+ E+ TG LF GK+Y D L I+++ G P P+ V K
Sbjct: 194 QTVDIWSVGCIMAEMLTGKTLFK---GKDYL---DQLTQILKVTGVPGPEFVQKLEDKAA 247
Query: 322 RYFT---PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
+ + P+ + L P +AS A D L ML ++ R +A
Sbjct: 248 KSYIKSLPKYPRKDFSTLFP----------------KASPQAVDLLEKMLELDVDKRLTA 291
Query: 378 ADCLRHPWLNPRR 390
+ L HP+ + R
Sbjct: 292 TEALEHPYFDSFR 304
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 4e-12
Identities = 65/251 (25%), Positives = 93/251 (37%), Gaps = 66/251 (26%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR------DEIVLLKAVGRKSNVHS 89
LG G F +V+ +L D F A+K V EI LL + + V
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
T+ E + + + V G +L +L+ + Y +R
Sbjct: 68 --LGTEREEDNLYIFLEL---------------VPGGSLAKLLKK--YGSFPEPVIRLYT 108
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
+Q+L GL YLH + +H DIK NIL VD + V ++A GM + S
Sbjct: 109 RQILLGLEYLHDR-NTVHRDIKGANIL--VDTNGVVKLA-------DFGMAKQVVEFSFA 158
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWS 269
F G+ W+ A E+ +Q GYG AADIWS
Sbjct: 159 KSFK------------------GSPYWM----APEVIAQQ---------GGYGLAADIWS 187
Query: 270 TACMAFELATG 280
C E+ATG
Sbjct: 188 LGCTVLEMATG 198
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 5e-12
Identities = 87/364 (23%), Positives = 134/364 (36%), Gaps = 84/364 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK +
Sbjct: 18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---- 73
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
E VI LL+ F + +V +MG +L ++ H+Q
Sbjct: 74 ----------KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 123
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+I Q+L GL Y+H+ IIH D+KP N+ +
Sbjct: 124 ---FLIYQILRGLKYIHS-ADIIHRDLKPSNLAV-------------------------- 153
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGYG 262
NE D +KI D G A DD + TR YR+ E+++ Y
Sbjct: 154 ---------------NE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 196
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 197 QTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKK------ 244
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ R + + A D L ML ++ R +AA L
Sbjct: 245 --ISSESARNYIQSLTQMPKMNFANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALA 299
Query: 383 HPWL 386
H +
Sbjct: 300 HAYF 303
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 6e-12
Identities = 93/370 (25%), Positives = 152/370 (41%), Gaps = 89/370 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNV 87
Y + KLG G ++TV+ + VALK+++ ++ TA E LLK + +
Sbjct: 7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHAN-- 64
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
I LL+D I+++ + +VFE + +L + + + G+H +NV+
Sbjct: 65 -------------IVLLHDI-IHTKET--LTLVFEYVHTDLCQYMDKHP-GGLHPENVKL 107
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ Q+L GL+Y+H Q I+H D+KP+N+L
Sbjct: 108 FLFQLLRGLSYIH-QRYILHRDLKPQNLL------------------------------- 135
Query: 208 TMSDFSLLDPANEVYDISVKIADLG--NACWIDDH-FADEIQTRQYRSVEVLIGAG-YGP 263
+SD L K+AD G A + H +++E+ T YR +VL+G+ Y
Sbjct: 136 -ISDTGEL-----------KLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYST 183
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+W C+ E+ G F + D L I ++G P E G +L +
Sbjct: 184 CLDMWGVGCIFVEMIQGVAAFPGMKDIQ-----DQLERIFLVLG-TPNEDTWPGVHSLPH 237
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLR 382
F P+ + LY + W+K + A D +L K R SA L
Sbjct: 238 FKPE----------RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287
Query: 383 HPW---LNPR 389
H + L PR
Sbjct: 288 HEYFSDLPPR 297
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 2e-11
Identities = 86/369 (23%), Positives = 147/369 (39%), Gaps = 97/369 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSN 86
Y I K+G G + V+ + + VA+K ++ ++ TA EI LLK +
Sbjct: 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHP-- 59
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN-- 144
N + V L+ + ++Y ++FE + +L + + S KG ++
Sbjct: 60 ------NIVCLQDV--LMQESRLY--------LIFEFLSMDLKKYL-DSLPKGQYMDAEL 102
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V++ + Q+L+G+ + H++ R++H D+KP+N+L +D V ++A
Sbjct: 103 VKSYLYQILQGILFCHSR-RVLHRDLKPQNLL--IDNKGVIKLA---------------- 143
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGP 263
DF L + I V++ + E+ T YR+ EVL+G+ Y
Sbjct: 144 ------DFGL----ARAFGIPVRV------------YTHEVVTLWYRAPEVLLGSPRYST 181
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV------LSQG 317
DIWS + E+AT LF + + D L I ++G ++V L
Sbjct: 182 PVDIWSIGTIFAEMATKKPLFHGDS------EIDQLFRIFRILGTPTEDVWPGVTSLPDY 235
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
K T + + NL GL D L ML + R SA
Sbjct: 236 KNTFPKWKKGSLRSAVKNLDEDGL-------------------DLLEKMLIYDPAKRISA 276
Query: 378 ADCLRHPWL 386
L HP+
Sbjct: 277 KKALNHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 2e-11
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 67/290 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVK---SDQVYADTARDEIVLLKAVGRK 84
+Y + ++G G + V+ + DL++ FVALK V+ ++ + E+ +L+ +
Sbjct: 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL--- 58
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNG--THICMVFEVMGYNLLRLIARSDYKGIHI 142
T V+RL D SR T + +VFE + +L + + G+
Sbjct: 59 --------ETFEHPNVVRLF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 109
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ ++ ++ Q+L GL++LH+ R++H D+KP+NIL+ T +I
Sbjct: 110 ETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILV--------------TSSGQI----- 149
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
++DF L +Y + + + W YR+ EVL+ + Y
Sbjct: 150 -----KLADFGLA----RIYSFQMALTSVVVTLW-------------YRAPEVLLQSSYA 187
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312
D+WS C+ E+ LF + D D L I++++G +P E
Sbjct: 188 TPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLGKILDVIG-LPGE 230
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-11
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 61/271 (22%)
Query: 119 MVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178
+V+E+M +L ++I RS + + + + + Q+L GL Y+H+ ++H D+KP N+L+
Sbjct: 86 IVYELMDTDLHQII-RSS-QTLSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLN 142
Query: 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238
+ D KI DF L +E D
Sbjct: 143 ANCDL------------KIC------------DFGLARTTSEKGDF-------------- 164
Query: 239 DHFADEIQTRQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDD 297
+ + TR YR+ E+L+ + Y A D+WS C+ EL LF GK+Y
Sbjct: 165 --MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLF---PGKDYV---H 216
Query: 298 HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEAS 357
L I EL+G S ++ L + + R I +L P+ Q + + A
Sbjct: 217 QLKLITELLG-------SPSEEDLGFIRNEKARRYIRSL-PYTPRQSFARLFPHANPLAI 268
Query: 358 DFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
D + ML + R + + L HP+L
Sbjct: 269 DLLE---KMLVFDPSKRITVEEALAHPYLAS 296
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 4e-11
Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 64/255 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGRKS 85
+ + +K+G G FS V+ + L D VALK V+ ++ AR EI LLK +
Sbjct: 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD--- 60
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI--ARSDYKGIHIQ 143
H + VI+ L F I + N +I + G +L R+I + + I +
Sbjct: 61 --HPN---------VIKYLASF-IEN-NELNIVLELADAG-DLSRMIKHFKKQKRLIPER 106
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ Q+ L ++H++ RI+H DIKP N+ + K +G+
Sbjct: 107 TIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITAT---------GVVKLGDLGLGRFF 156
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
S T + SL + T Y S E + GY
Sbjct: 157 S-SKTTAAHSL------------------------------VGTPYYMSPERIHENGYNF 185
Query: 264 AADIWSTACMAFELA 278
+DIWS C+ +E+A
Sbjct: 186 KSDIWSLGCLLYEMA 200
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 5e-11
Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 87/363 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLKAVGRKSNV 87
Y + KLG G ++TV+ VALK ++ + TA E+ LLK + + +N+
Sbjct: 8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANI 66
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+ ++ +EK + L VFE + +L + + I++ NV+
Sbjct: 67 -VTLHDIIHTEKSLTL----------------VFEYLDKDLKQYLDDCG-NSINMHNVKL 108
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ Q+L GLNY H + +++H D+KP+N+L+ + + +KL
Sbjct: 109 FLFQLLRGLNYCHRR-KVLHRDLKPQNLLI----------------NERGELKL------ 145
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPAAD 266
+DF L I K +++E+ T YR ++L+G+ Y D
Sbjct: 146 --ADFGLA----RAKSIPTKT------------YSNEVVTLWYRPPDILLGSTDYSTQID 187
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV---LSQGKKTLRY 323
+W C+ +E++TG LF P + E + L I ++G +E + ++ Y
Sbjct: 188 MWGVGCIFYEMSTGRPLF-PGSTVE-----EQLHFIFRILGTPTEETWPGILSNEEFKSY 241
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
P+ Y+ H + + SD A+ L +L + R SA + ++H
Sbjct: 242 NYPK--------------YRADCLHNHAPRLD-SDGAELLSKLLQFEGRKRISAEEAMKH 286
Query: 384 PWL 386
P+
Sbjct: 287 PYF 289
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 6e-11
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 65/251 (25%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD------EIVLLKAVGRKSNVHS 89
LG G F V+L +D+ +A+K V D +T ++ EI LLK + +
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHE----- 64
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTI 148
R++ + + + + E M G ++ + Y + R
Sbjct: 65 ------------RIVQYYGCLRDDE-TLSIFMEYMPGGSVKDQLKA--YGALTETVTRKY 109
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+Q+LEG+ YLH+ I+H DIK NIL RD+ + K+G
Sbjct: 110 TRQILEGVEYLHSN-MIVHRDIKGANIL------------RDSAGNVKLG---------- 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
DF + + I + + T + S EV+ G GYG AD+W
Sbjct: 147 --DFG---ASKRLQTICSSGTGMKSV----------TGTPYWMSPEVISGEGYGRKADVW 191
Query: 269 STACMAFELAT 279
S C E+ T
Sbjct: 192 SVGCTVVEMLT 202
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 9e-11
Identities = 91/372 (24%), Positives = 150/372 (40%), Gaps = 100/372 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY ++++G G + TV + D + VA+K + +++A A E+ LLK +
Sbjct: 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM---- 71
Query: 86 NVHSSAYNTQASEKVIRLLN----DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
E VI LL+ D + + ++ M F MG +L +L+ ++ +
Sbjct: 72 ----------KHENVIGLLDVFTPDLSLDRFHDFYLVMPF--MGTDLGKLM---KHEKLS 116
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
++ ++ Q+L+GL Y+H IIH D+KP N+ +
Sbjct: 117 EDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAV------------------------ 151
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AG 260
NE D +KI D G A D + TR YR+ EV++
Sbjct: 152 -----------------NE--DCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMH 192
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV---GPIPKEVLS-- 315
Y DIWS C+ E+ TG LF + DHL ++E++ G KE +
Sbjct: 193 YTQTVDIWSVGCIMAEMLTGKPLF---------KGHDHLDQLMEIMKVTGTPSKEFVQKL 243
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLR 374
Q + Y FR+ D +L A+ A + L ML ++ + R
Sbjct: 244 QSEDAKNYVKKLPRFRKKD------FRSLLP--------NANPLAVNVLEKMLVLDAESR 289
Query: 375 ASAADCLRHPWL 386
+AA+ L HP+
Sbjct: 290 ITAAEALAHPYF 301
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 63/244 (25%)
Query: 39 GHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97
G F +V+L+ + A+K++ KSD + A++++ +KA ++ + S
Sbjct: 7 GAFGSVYLAKKRSTGDYFAIKVLKKSDMI----AKNQVTNVKA--ERAIMMIQGE----S 56
Query: 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGL 156
V +L F+ + ++ +V E + G + LI G+ + I +V+ G+
Sbjct: 57 PYVAKLYYSFQ----SKDYLYLVMEYLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGV 110
Query: 157 NYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLD 216
LH Q IIH DIKPEN+L+ D T H K ++DF L
Sbjct: 111 EDLH-QRGIIHRDIKPENLLI------------DQTGHLK------------LTDFGL-- 143
Query: 217 PANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFE 276
+ + K + T Y + E ++G G +D WS C+ FE
Sbjct: 144 --SRNGLENKKF----------------VGTPDYLAPETILGVGDDKMSDWWSLGCVIFE 185
Query: 277 LATG 280
G
Sbjct: 186 FLFG 189
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 77/277 (27%), Positives = 110/277 (39%), Gaps = 67/277 (24%)
Query: 117 ICMVFEVMGYNLLRLI-ARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175
I +VFE+M +L ++I A D H Q + Q+L L Y+HT + H D+KP+NI
Sbjct: 79 IYVVFELMESDLHQVIKANDDLTPEHHQ---FFLYQLLRALKYIHTA-NVFHRDLKPKNI 134
Query: 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC 235
L D KL + DF L A D A
Sbjct: 135 LANAD------------------CKL------KICDFGLARVA---------FNDTPTAI 161
Query: 236 WIDDHFADEIQTRQYRSVEVLIG---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
+ D+ A TR YR+ E L G + Y PA DIWS C+ E+ TG LF GK
Sbjct: 162 FWTDYVA----TRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF---PGKNV 213
Query: 293 SRDDDHLAHIVELVGPIPKEVLS--QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYH 350
L I +L+G E +S + +K RY + R P ++K+
Sbjct: 214 VH---QLDLITDLLGTPSPETISRVRNEKARRYLSSM----RKKQPVP------FSQKF- 259
Query: 351 WSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387
A+ L +L + K R +A + L P+
Sbjct: 260 -PNADPLAL-RLLERLLAFDPKDRPTAEEALADPYFK 294
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 54/299 (18%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
+G G F +V+L + +A+K V+ V A + + +L A+ R+ + +
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH-- 65
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLE 154
E +++ L S + H+ + E V G ++ L+ ++Y VR ++Q+L+
Sbjct: 66 --ENIVQYLGS----SLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILK 117
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
GLNYLH + IIH DIK NIL VD +K G+K+ S + +
Sbjct: 118 GLNYLHNR-GIIHRDIKGANIL--VD--------------NKGGIKISDFGISKKLEANS 160
Query: 215 LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274
L S++ G+ W+ + EV+ Y ADIWS C+
Sbjct: 161 LSTKTNGARPSLQ----GSVFWM--------------APEVVKQTSYTRKADIWSLGCLV 202
Query: 275 FELATGDYLFDPKAGKEYSRDDDHLAHIVELVGP-IPKEVLSQGKKTLR-YFTPQGNFR 331
E+ TG + F P + + + I E P IP + S+ L F N R
Sbjct: 203 VEMLTGKHPF-PDCTQLQA-----IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKR 255
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 3e-10
Identities = 67/261 (25%), Positives = 102/261 (39%), Gaps = 70/261 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y +I +G G + V+ + L + VA+K + ++ T+ DE L K V
Sbjct: 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK--CQTSVDE--LRKEV-------- 50
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK--GIHIQNVRT 147
A + V++ F + G + +V + L I +S Y G+ + T
Sbjct: 51 QAMSQCNHPNVVKYYTSFVV----GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIAT 106
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++K+VL+GL YLH+ + IH DIK NIL+ D
Sbjct: 107 VLKEVLKGLEYLHSNGQ-IHRDIKAGNILLGEDG-------------------------- 139
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ-------YRSVEVLI-GA 259
SVKIAD G + + D + R+ + + EV+
Sbjct: 140 -----------------SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVH 182
Query: 260 GYGPAADIWSTACMAFELATG 280
GY ADIWS A ELATG
Sbjct: 183 GYDFKADIWSFGITAIELATG 203
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 6e-10
Identities = 91/365 (24%), Positives = 152/365 (41%), Gaps = 91/365 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNV 87
Y + KLG G ++TV+ + VALK ++ ++ TA E+ LLK + + +N
Sbjct: 7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHAN- 64
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG--IHIQNV 145
I L+D R T +VFE + +L + + D G + + NV
Sbjct: 65 -------------IVTLHDIIHTERCLT---LVFEYLDSDLKQYL---DNCGNLMSMHNV 105
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + Q+L GL+Y H + +I+H D+KP+N+L+ + K +KL
Sbjct: 106 KIFMFQLLRGLSYCHKR-KILHRDLKPQNLLI----------------NEKGELKL---- 144
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGPA 264
+DF L + K +++E+ T YR +VL+G+ Y
Sbjct: 145 ----ADFGLA----RAKSVPTKT------------YSNEVVTLWYRPPDVLLGSTEYSTP 184
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV---LSQGKKTL 321
D+W C+ +E+ATG +F KE + HL I L+G +E ++ ++
Sbjct: 185 IDMWGVGCILYEMATGRPMFPGSTVKE----ELHL--IFRLLGTPTEETWPGITSNEEFR 238
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
Y PQ Y+ H + + +D D L +L K R SA L
Sbjct: 239 SYLFPQ--------------YRAQPLINHAPRLD-TDGIDLLSSLLLYETKSRISAEAAL 283
Query: 382 RHPWL 386
RH +
Sbjct: 284 RHSYF 288
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 2e-09
Identities = 69/291 (23%), Positives = 104/291 (35%), Gaps = 65/291 (22%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-RDEIVLLKAVG 82
DL N I LG G+ +V + T +A K+V A ++ R +I L+ +
Sbjct: 1 DLRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIG---AKSSVRKQI--LRELQ 55
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
S ++ F N +ICM E M L I + I +
Sbjct: 56 IMHECRS--------PYIVSFYGAFL----NENNICMCMEFMDCGSLDRIYK-KGGPIPV 102
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ + I V+EGL YL+ RI+H DIKP NIL+ +I
Sbjct: 103 EILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV--------------NSRGQI----- 143
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGY 261
K+ D G + + + AD + T Y S E + G Y
Sbjct: 144 ------------------------KLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKY 179
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312
+D+WS ELA G + F D I++L+ I +E
Sbjct: 180 TVKSDVWSLGISIIELALGKFPFA--FSNIDDDGQDDPMGILDLLQQIVQE 228
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 51/187 (27%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
Q VR +QVLEGL YLH++ I+H D+K +N+L VD D + +
Sbjct: 108 QLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLL--VDADGICK---------------- 148
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
+SDF + ++++YD ++ G+ W+ A E+ + GY
Sbjct: 149 ------ISDFGISKKSDDIYDNDQNMSMQGSVFWM----APEVIHSYSQ--------GYS 190
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL-----VGPIPKEVLSQG 317
DIWS C+ E+ AG+ D++ +A + +L PIP +V
Sbjct: 191 AKVDIWSLGCVVLEMF---------AGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL 241
Query: 318 KKTLRYF 324
F
Sbjct: 242 SPVALDF 248
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 87/370 (23%), Positives = 147/370 (39%), Gaps = 95/370 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + V+ + D +ALK ++ D+ TA EI LLK + +
Sbjct: 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
N+ + SEK ++Y +VFE + +L + + S + + +
Sbjct: 62 NI-VRLQDVVHSEK--------RLY--------LVFEYLDLDLKKHMDSSPDFAKNPRLI 104
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+T + Q+L G+ Y H+ R++H D+KP+N+L +D RR +A K
Sbjct: 105 KTYLYQILRGIAYCHSH-RVLHRDLKPQNLL--ID----RR--TNALK------------ 143
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
++DF L + I V+ F E+ T YR+ E+L+G+ Y
Sbjct: 144 ---LADFGLA----RAFGIPVRT------------FTHEVVTLWYRAPEILLGSRHYSTP 184
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG------- 317
DIWS C+ E+ LF + + D L I ++G P E G
Sbjct: 185 VDIWSVGCIFAEMVNQKPLFPGDS------EIDELFKIFRILG-TPNEETWPGVTSLPDY 237
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
K + P+ + L+P G+ D L ML ++ R +A
Sbjct: 238 KSAFPKWPPKDLATVVPTLEPAGV-------------------DLLSKMLRLDPSKRITA 278
Query: 378 ADCLRHPWLN 387
L H +
Sbjct: 279 RAALEHEYFK 288
|
Length = 294 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 3e-09
Identities = 61/260 (23%), Positives = 90/260 (34%), Gaps = 87/260 (33%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG G F V L ALK VK + ++ I K + + N
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN--------- 51
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNL---LRLIAR-SDYKGIHIQNVRTIIK 150
+++L FK + +I M+ E G L LR +Y R I
Sbjct: 52 -HPFIVKLYRTFK----DKKYIYMLMEYCLGGELWTILRDRGLFDEYTA------RFYIA 100
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
V+ YLH + II+ D+KPEN+L LDS
Sbjct: 101 CVVLAFEYLHNR-GIIYRDLKPENLL----------------------------LDS--- 128
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ----------YRSVEVLIGAG 260
Y VK+ D G FA ++++ Q Y + E+++ G
Sbjct: 129 ---------NGY---VKLVDFG--------FAKKLKSGQKTWTFCGTPEYVAPEIILNKG 168
Query: 261 YGPAADIWSTACMAFELATG 280
Y + D WS + +EL TG
Sbjct: 169 YDFSVDYWSLGILLYELLTG 188
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 3e-09
Identities = 65/251 (25%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD------EIVLLKAVGRKSNVHS 89
LG G F V+L +D +A+K V+ D +T+++ EI LLK + + V
Sbjct: 10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV-RTI 148
E+ + + F + G+ + ++ Y L +NV R
Sbjct: 70 YGCLRDPMERTLSI---FMEHMPGGS---IKDQLKSYGAL------------TENVTRKY 111
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+Q+LEG++YLH+ I+H DIK NIL RD+ + K+G
Sbjct: 112 TRQILEGVSYLHSN-MIVHRDIKGANIL------------RDSVGNVKLG---------- 148
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
DF L C T + S EV+ G GYG ADIW
Sbjct: 149 --DFG-------------ASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIW 193
Query: 269 STACMAFELAT 279
S C E+ T
Sbjct: 194 SVGCTVVEMLT 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 5e-09
Identities = 78/362 (21%), Positives = 120/362 (33%), Gaps = 106/362 (29%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
+ +LG G +V ALK + T L K + R+ ++ S
Sbjct: 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTI--------TTDPNPDLQKQILRELEINKSC- 56
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT----- 147
S +++ F + + I + E L I YK + + R
Sbjct: 57 ---KSPYIVKYYGAF--LDESSSSIGIAMEYCEGGSLDSI----YKKVKKRGGRIGEKVL 107
Query: 148 --IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
I + VL+GL+YLH++ +IIH DIKP NI
Sbjct: 108 GKIAESVLKGLSYLHSR-KIIHRDIKPSNI------------------------------ 136
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPA 264
LL +V K+ D G + + + A T Y + E + G Y
Sbjct: 137 --------LLTRKGQV-----KLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSIT 183
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
+D+WS E+A + F P+ +GPI E+LS Y
Sbjct: 184 SDVWSLGLTLLEVAQNRFPFPPEGEPP--------------LGPI--ELLS-------YI 220
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
N D WS+ +F DF+ L + R + D L HP
Sbjct: 221 VNMPNPELKDEPG---------NGIKWSE----EFKDFIKQCLEKDPTRRPTPWDMLEHP 267
Query: 385 WL 386
W+
Sbjct: 268 WI 269
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 7e-09
Identities = 62/273 (22%), Positives = 90/273 (32%), Gaps = 99/273 (36%)
Query: 123 VMGY----NLLRLI--ARSDYKGIHIQNVRTIIKQVLEGLNYLHT----QCRIIHTDIKP 172
VM Y +L +LI + + K I + + I+ Q+L L H ++H D+KP
Sbjct: 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKP 138
Query: 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLG 232
NI + DA + K+G DF L KI
Sbjct: 139 ANIFL------------DANNNVKLG------------DFGL-----------AKILG-- 161
Query: 233 NACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
D FA + T Y S E L Y +DIWS C+ +EL L P +
Sbjct: 162 ----HDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCA---LSPPFTARN 214
Query: 292 YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHW 351
++L I +G FRRI L +V+
Sbjct: 215 Q----------LQLASKI----------------KEGKFRRIPYRYSSELNEVIKS---- 244
Query: 352 SKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
ML+V+ R S + L+ P
Sbjct: 245 --------------MLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 1e-08
Identities = 61/269 (22%), Positives = 93/269 (34%), Gaps = 96/269 (35%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-------RDEIVLLKAVGRKSNVH 88
LG G + TV+ Q + +A+K V+ D A ++E+ LLK++ + V
Sbjct: 8 LGKGAYGTVYCGLTNQGQ-LIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV- 65
Query: 89 SSAY-NTQASEKVIRLLNDF-------KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
Y T + I + +F I +R G VF
Sbjct: 66 --QYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVF------------------- 104
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
KQ+L+G+ YLH C ++H DIK N+ M
Sbjct: 105 -----CKYTKQILDGVAYLHNNC-VVHRDIKGNNV-----------------------ML 135
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA---CWIDDHFADEIQTRQYRSV---- 253
+P + +K+ D G A W+ H +
Sbjct: 136 MPNGI--------------------IKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWM 175
Query: 254 --EVLIGAGYGPAADIWSTACMAFELATG 280
EV+ +GYG +DIWS C FE+ATG
Sbjct: 176 APEVINESGYGRKSDIWSIGCTVFEMATG 204
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 87/363 (23%), Positives = 147/363 (40%), Gaps = 87/363 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLKAVGRKSNV 87
Y + KLG G ++TV+ + VALK ++ + TA E+ LLK + + V
Sbjct: 8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 67
Query: 88 --HSSAYNTQASEKVIRLLN-DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
H + ++ V L+ D K Y + +I + + N
Sbjct: 68 TLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNI----------------------MSMHN 105
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+L GL Y H + +++H D+KP+N+L+ + + +KL
Sbjct: 106 VKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLI----------------NERGELKL--- 145
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-YGP 263
+DF L + K +++E+ T YR +VL+G+ Y
Sbjct: 146 -----ADFGLA----RAKSVPTKT------------YSNEVVTLWYRPPDVLLGSSEYST 184
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+W C+ FE+A+G LF P + E D+ HL I L+G P E G +
Sbjct: 185 QIDMWGVGCIFFEMASGRPLF-PGSTVE---DELHL--IFRLLG-TPTEETWPGISSNDE 237
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
F NF + KP L H + + ++ + L L K R SA + ++H
Sbjct: 238 FKNY-NFPK---YKPQPLIN------HAPRLD-TEGIELLTKFLQYESKKRISAEEAMKH 286
Query: 384 PWL 386
+
Sbjct: 287 AYF 289
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 55.2 bits (134), Expect = 1e-08
Identities = 58/270 (21%), Positives = 98/270 (36%), Gaps = 95/270 (35%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALK------IVKSDQVYADTARDEIVLLKAVGR 83
+ I+ LG G F V L + ALK IVK QV + +E +L+++
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQV--EHVLNEKRILQSIR- 59
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMG---YNLLRLIARSDYKG 139
++ L F+ + +++ +V E V G ++ LR R
Sbjct: 60 -------------HPFLVNLYGSFQ----DDSNLYLVMEYVPGGELFSHLRKSGRFP--- 99
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
R QV+ L YLH+ I++ D+KPEN+L+ D+ +
Sbjct: 100 --EPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLL------------DSDGY----- 139
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR--------QYR 251
+KI D G FA ++ R +Y
Sbjct: 140 --------------------------IKITDFG--------FAKRVKGRTYTLCGTPEYL 165
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGD 281
+ E+++ GYG A D W+ + +E+ G
Sbjct: 166 APEIILSKGYGKAVDWWALGILIYEMLAGY 195
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 53/263 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ I+ LG G V+L V LK + +++A LK + +K +
Sbjct: 2 HFKKIKLLGKGDVGRVFL---------VRLK--GTGKLFA---------LKVLDKKEMIK 41
Query: 89 SSAYNTQASEKVI--RLLNDF--KIYSR--NGTHICMVFE-VMGYNLLRLIARSDYKGIH 141
+ +E+ I L + F +Y+ T++C+V + G L RL+ R K +
Sbjct: 42 RNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLS 101
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL-------MCVDYDKVRRMARDATKH 194
+ R +VL L YLH I++ D+KPENIL M D+D ++ +
Sbjct: 102 EEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
K K S S+ + + N+ + T +Y + E
Sbjct: 161 SKALRKGS----RRSSVNSIPSET--FSEEPSFRS---NSF---------VGTEEYIAPE 202
Query: 255 VLIGAGYGPAADIWSTACMAFEL 277
V+ G G+G A D W+ + +E+
Sbjct: 203 VISGDGHGSAVDWWTLGILLYEM 225
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 2e-08
Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 77/260 (29%)
Query: 27 NFRYHVIRKLGWGHFSTVWL--SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84
+Y+++ L G V++ + + V +K V T EI +LK + +
Sbjct: 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAV----TGGKTPGREIDILKTISHR 146
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
+ +I L++ + R + +CMV +L + RS + ++
Sbjct: 147 A--------------IINLIHAY----RWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQ 186
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
TI +++LE L YLH + IIH D+K ENI + D
Sbjct: 187 AITIQRRLLEALAYLHGR-GIIHRDVKTENIFL--DE----------------------- 220
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ------TRQYRSVEVLIG 258
P N V + D G AC +D H D Q T + S E+L
Sbjct: 221 ------------PENAV------LGDFGAACKLDAH-PDTPQCYGWSGTLETNSPELLAL 261
Query: 259 AGYGPAADIWSTACMAFELA 278
Y DIWS + FE++
Sbjct: 262 DPYCAKTDIWSAGLVLFEMS 281
|
Length = 392 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 37/138 (26%), Positives = 47/138 (34%), Gaps = 46/138 (33%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ I +++ L YLH++ IIH DIKP+NIL+ D H
Sbjct: 102 VKFWICEIVLALEYLHSK-GIIHRDIKPDNILL------------DEQGH---------- 138
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNAC-WIDDHFADEIQ-TRQYRSVEVLIGAGYG 262
V I D A D T Y + EVL GY
Sbjct: 139 ---------------------VHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYS 177
Query: 263 PAADIWSTACMAFELATG 280
A D WS A+E G
Sbjct: 178 VAVDWWSLGVTAYECLRG 195
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 4e-08
Identities = 52/198 (26%), Positives = 72/198 (36%), Gaps = 59/198 (29%)
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
+ + I I ++ I + VL + YLH RIIH DIK ENI +
Sbjct: 174 AAKRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFI----------------- 215
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQY---- 250
N D+ + D G AC+ D + Y
Sbjct: 216 ------------------------NHPGDVCL--GDFGAACFP----VDINANKYYGWAG 245
Query: 251 ----RSVEVLIGAGYGPAADIWSTACMAFELATG-DYLFDPKAGKEYSRDDD-HLAHIVE 304
+ E+L YGPA DIWS + FE+AT D LF+ K G + D D + I+
Sbjct: 246 TIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE-KDGLDGDCDSDRQIKLIIR 304
Query: 305 LVGPIPKEVLSQGKKTLR 322
G P E + L
Sbjct: 305 RSGTHPNEFPIDAQANLD 322
|
Length = 391 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 5e-08
Identities = 66/288 (22%), Positives = 102/288 (35%), Gaps = 77/288 (26%)
Query: 110 YSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169
YS ICM E M L + + + I + I VL GL YL + +I+H D
Sbjct: 69 YSDGEISICM--EHMDGGSLDQVLKKAGR-IPENILGKISIAVLRGLTYLREKHKIMHRD 125
Query: 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIA 229
+KP NIL+ + +K+
Sbjct: 126 VKPSNILVNSRGE-------------------------------------------IKLC 142
Query: 230 DLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288
D G + + D A+ + TR Y S E L G Y +DIWS E+A G Y P
Sbjct: 143 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD 202
Query: 289 GKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLT-- 346
KE + G E + K++ R + D+ +P ++++L
Sbjct: 203 AKELE----------AMFGRPVSE--GEAKESHRPVSGHPP----DSPRPMAIFELLDYI 246
Query: 347 --------EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
+S +F DF+ L N K RA + +HP++
Sbjct: 247 VNEPPPKLPSGAFSD----EFQDFVDKCLKKNPKERADLKELTKHPFI 290
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 6e-08
Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 36/185 (19%)
Query: 33 IRKLGWGHFSTVWLS-WDLQD---KTFVALKIVKSDQVYADTA--RDEIVLLKAVGRKSN 86
+KLG G F V+ + + VA+K +K D E +++ +
Sbjct: 4 GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLD---- 59
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNV 145
H +++LL + +V E M +LL + ++ K + + ++
Sbjct: 60 -H---------PNIVKLLG----VCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDL 105
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDATKH---HKI 197
+ Q+ G+ YL ++ IH D+ N L V + V + ++RD
Sbjct: 106 LSFALQIARGMEYLESK-NFIHRDLAARNCL--VGENLVVKISDFGLSRDLYDDDYYKVK 162
Query: 198 GMKLP 202
G KLP
Sbjct: 163 GGKLP 167
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 7e-08
Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 70/314 (22%)
Query: 35 KLGWGHFSTVWLSW--DLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
K+G G + V+ + D +D+ ALK ++ + R EI LL+ +
Sbjct: 8 KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACR-EIALLRELKHP-------- 58
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI-----ARSDYKGIHIQN--V 145
N A +KV +D K++ ++F+ ++L +I ++++ K + + V
Sbjct: 59 NVIALQKVFLSHSDRKVW--------LLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMV 110
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG-MKLPMS 204
++++ Q+L+G++YLH ++H D+KP NIL+ + + R+ KI M
Sbjct: 111 KSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRV--------KIADMGFARL 161
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263
+S + + LDP + T YR+ E+L+GA Y
Sbjct: 162 FNSPLKPLADLDPV--------------------------VVTFWYRAPELLLGARHYTK 195
Query: 264 AADIWSTACMAFELATGDYLF-----DPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
A DIW+ C+ EL T + +F D K + D L I ++G + +
Sbjct: 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHH--DQLDRIFSVMGFPADKDWEDIR 253
Query: 319 KTLRYFTPQGNFRR 332
K Y T Q +FRR
Sbjct: 254 KMPEYPTLQKDFRR 267
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 1e-07
Identities = 65/250 (26%), Positives = 96/250 (38%), Gaps = 61/250 (24%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD------EIVLLKAVGRKSNVHS 89
LG G F V+L +D+ +A K V+ D +T+++ EI LLK
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLK---------- 59
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
N Q E++++ + + I M + G +L A Y + R
Sbjct: 60 ---NLQ-HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA---YGALTESVTRKYT 112
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
+Q+LEG++YLH+ I+H DIK NIL RD+ + K+G
Sbjct: 113 RQILEGMSYLHSN-MIVHRDIKGANIL------------RDSAGNVKLG----------- 148
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWS 269
DF L C T + S EV+ G GYG AD+WS
Sbjct: 149 -DFG-------------ASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWS 194
Query: 270 TACMAFELAT 279
C E+ T
Sbjct: 195 LGCTVVEMLT 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 85/378 (22%), Positives = 120/378 (31%), Gaps = 142/378 (37%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNV 87
Y +I+++G G + V+ + D+ VA+K++K + + EI +LK R N+
Sbjct: 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-RHPNI 62
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGT-HICMVFEVMG-------YNLLR------LIA 133
AY F Y R I M E G Y + R IA
Sbjct: 63 --VAY--------------FGSYLRRDKLWIVM--EYCGGGSLQDIYQVTRGPLSELQIA 104
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ ++ L+GL YLH IH DIK NIL+ D D
Sbjct: 105 Y-------------VCRETLKGLAYLHET-GKIHRDIKGANILLTEDGD----------- 139
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQY 250
VK+AD G + + A I T +
Sbjct: 140 --------------------------------VKLADFGVSAQLTATIAKRKSFIGTPYW 167
Query: 251 RSVEVL---IGAGYGPAADIWSTACMAFELATGD-YLFDPKAGKEYSRDDDHLAHIVELV 306
+ EV GY DIW+ A ELA +FD H + +
Sbjct: 168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFD--------------LHPMRAL 213
Query: 307 GPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPM 366
I K N P L +K WS F DF+
Sbjct: 214 FLISKS----------------------NFPP----PKLKDKEKWSP----VFHDFIKKC 243
Query: 367 LHVNQKLRASAADCLRHP 384
L + K R +A L+HP
Sbjct: 244 LTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 2e-07
Identities = 61/251 (24%), Positives = 95/251 (37%), Gaps = 63/251 (25%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD------EIVLLKAVGRKSNVHS 89
LG G F V+L +D +A+K V D +T+++ EI LLK
Sbjct: 10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLK---------- 59
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+++++ + I + + G +L A Y + R
Sbjct: 60 ----NLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA---YGALTENVTRRYT 112
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
+Q+L+G++YLH+ I+H DIK NIL RD+ + K+G
Sbjct: 113 RQILQGVSYLHSN-MIVHRDIKGANIL------------RDSAGNVKLG----------- 148
Query: 210 SDFSLLDPANEVYDISVKIADL-GNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
DF + I + G W+ S EV+ G GYG AD+W
Sbjct: 149 -DFGASKRIQTICMSGTGIKSVTGTPYWM--------------SPEVISGEGYGRKADVW 193
Query: 269 STACMAFELAT 279
S AC E+ T
Sbjct: 194 SVACTVVEMLT 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 2e-07
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 49/175 (28%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHI-QNVRTIIK-QVLEGLNYLHTQCRIIHTDIKPEN 174
ICM EVM +L + + KG+ I +++ I +++ L YLH++ +IH D+KP N
Sbjct: 77 ICM--EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSN 134
Query: 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234
+L ++ ++ + DF + + + D K D G
Sbjct: 135 VL--------------INRNGQV----------KLCDFGI---SGYLVDSVAKTIDAG-- 165
Query: 235 CWIDDHFADEIQTRQYRSVEVLIG----AGYGPAADIWSTACMAFELATGDYLFD 285
+ Y + E + GY +D+WS ELATG + +D
Sbjct: 166 ------------CKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD 208
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 2e-07
Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 37/185 (20%)
Query: 33 IRKLGWGHFSTVWLS-WDLQDKT---FVALKIVKSDQVYADTA--RDEIVLLKAVGRKSN 86
+KLG G F V+ + VA+K +K D E +++ +
Sbjct: 4 GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLD---- 59
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNV 145
H V++LL + +V E M +LL + ++ K + + ++
Sbjct: 60 -H---------PNVVKLLG----VCTEEEPLYIVMEYMEGGDLLSYLRKNRPK-LSLSDL 104
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDATKH---HKI 197
+ Q+ G+ YL ++ IH D+ N L V + V + ++RD K
Sbjct: 105 LSFALQIARGMEYLESK-NFIHRDLAARNCL--VGENLVVKISDFGLSRDLYDDDYYRKR 161
Query: 198 GMKLP 202
G KLP
Sbjct: 162 GGKLP 166
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 4e-07
Identities = 59/260 (22%), Positives = 101/260 (38%), Gaps = 61/260 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVLLKAVGRKS 85
+Y IR +G G F V L D+ V +K + +Q+ D A++E +LK + +
Sbjct: 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+I +F I M + G L I + + +
Sbjct: 61 --------------IIEYYENF--LEDKALMIVMEY-APGGTLAEYIQKRCNSLLDEDTI 103
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
Q+L L+++HT+ I+H D+K +NIL+ DK HK+ +K+
Sbjct: 104 LHFFVQILLALHHVHTK-LILHRDLKTQNILL----DK-----------HKMVVKI---- 143
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAA 265
DF + + + S +G C+I S E+ G Y +
Sbjct: 144 ----GDFGI---SKILSSKSKAYTVVGTPCYI--------------SPELCEGKPYNQKS 182
Query: 266 DIWSTACMAFELATGDYLFD 285
DIW+ C+ +ELA+ F+
Sbjct: 183 DIWALGCVLYELASLKRAFE 202
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 7e-07
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 50/171 (29%)
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
I Q++ L YLH + RI+H D+ P NI++ D DKV
Sbjct: 118 IFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED-DKV----------------------- 153
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267
T++DF L + + T Y E++ YG AD+
Sbjct: 154 TITDFGLAKQKQP-----------------ESKLTSVVGTILYSCPEIVKNEPYGEKADV 196
Query: 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLA-HIVELV-GPIPKEVLSQ 316
W+ C+ +++ T F YS + LA IVE V P+P+ + S+
Sbjct: 197 WAFGCILYQMCTLQPPF-------YSTNMLSLATKIVEAVYEPLPEGMYSE 240
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 9e-07
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 69/254 (27%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
+ ++G G F V+ D + + VA+KI+ ++ A DEI ++ + S Y
Sbjct: 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-----AEDEIEDIQQEITVLSQCDSPY 63
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQNVRTI 148
T+ ++ GT + ++ E +G +LLR +++ + T+
Sbjct: 64 VTKYYGSYLK-----------GTKLWIIMEYLGGGSALDLLRAGPFDEFQ------IATM 106
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+K++L+GL+YLH++ + IH DIK N+L+ ++ +
Sbjct: 107 LKEILKGLDYLHSE-KKIHRDIKAANVLL--------------SEQGDV----------K 141
Query: 209 MSDFSLLDPANEVYDISVKIAD-LGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267
++DF + A ++ D +K +G W+ + EV+ + Y ADI
Sbjct: 142 LADFGV---AGQLTDTQIKRNTFVGTPFWM--------------APEVIQQSAYDSKADI 184
Query: 268 WSTACMAFELATGD 281
WS A ELA G+
Sbjct: 185 WSLGITAIELAKGE 198
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 1e-06
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 63/251 (25%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
+ K+G G F V+ D + + VA+KI+ ++ A DEI + + ++ V S
Sbjct: 9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-----AEDEI---EDIQQEITVLSQCD 60
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQ 151
+ ++ L D K++ ++ E +G + L L+ I TI+++
Sbjct: 61 SPYVTKYYGSYLKDTKLW--------IIMEYLGGGSALDLLEPGPLDETQIA---TILRE 109
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
+L+GL+YLH++ + IH DIK N+L+ ++H ++ ++D
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLL--------------SEHGEV----------KLAD 144
Query: 212 FSLLDPANEVYDISVKIAD-LGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWST 270
F + A ++ D +K +G W+ + EV+ + Y ADIWS
Sbjct: 145 FGV---AGQLTDTQIKRNTFVGTPFWM--------------APEVIKQSAYDSKADIWSL 187
Query: 271 ACMAFELATGD 281
A ELA G+
Sbjct: 188 GITAIELAKGE 198
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 1e-06
Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 70/314 (22%)
Query: 35 KLGWGHFSTVWLSW--DLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
K+G G + V+ + D +D ALK ++ + R EI LL+ +
Sbjct: 8 KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACR-EIALLRELKHP-------- 58
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI-----ARSDYKGIHIQN--V 145
N + +KV D K++ ++F+ ++L +I ++++ K + + V
Sbjct: 59 NVISLQKVFLSHADRKVW--------LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMV 110
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG-MKLPMS 204
++++ Q+L+G++YLH ++H D+KP NIL+ + + R+ KI M
Sbjct: 111 KSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRV--------KIADMGFARL 161
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263
+S + + LDP + T YR+ E+L+GA Y
Sbjct: 162 FNSPLKPLADLDPV--------------------------VVTFWYRAPELLLGARHYTK 195
Query: 264 AADIWSTACMAFELATGDYLF-----DPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
A DIW+ C+ EL T + +F D K Y D L I ++G + K
Sbjct: 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH--DQLDRIFNVMGFPADKDWEDIK 253
Query: 319 KTLRYFTPQGNFRR 332
K + T +FRR
Sbjct: 254 KMPEHSTLMKDFRR 267
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 2e-06
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 63/251 (25%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92
+ ++G G F V+ D + K VA+KI+ ++ A DEI + + ++ V S
Sbjct: 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-----AEDEI---EDIQQEITVLSQC- 59
Query: 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQ 151
S + R + GT + ++ E + G + L L+ + +I TI+++
Sbjct: 60 ---DSPYITRYYGSY----LKGTKLWIIMEYLGGGSALDLLKPGPLEETYIA---TILRE 109
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
+L+GL+YLH++ R IH DIK N+L L D ++D
Sbjct: 110 ILKGLDYLHSE-RKIHRDIKAANVL------------------------LSEQGDVKLAD 144
Query: 212 FSLLDPANEVYDISVKIAD-LGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWST 270
F + A ++ D +K +G W+ + EV+ + Y ADIWS
Sbjct: 145 FGV---AGQLTDTQIKRNTFVGTPFWM--------------APEVIKQSAYDFKADIWSL 187
Query: 271 ACMAFELATGD 281
A ELA G+
Sbjct: 188 GITAIELAKGE 198
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 3e-06
Identities = 38/141 (26%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
V++GL YL + +I+H D+KP NIL
Sbjct: 112 VIKGLTYLREKHKIMHRDVKPSNIL----------------------------------- 136
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWST 270
++ E+ K+ D G + + D A+ + TR Y S E L G Y +DIWS
Sbjct: 137 ---VNSRGEI-----KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 188
Query: 271 ACMAFELATGDYLFDPKAGKE 291
E+A G Y P KE
Sbjct: 189 GLSLVEMAIGRYPIPPPDAKE 209
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
VL GL YL + +I+H D+KP NIL
Sbjct: 112 VLRGLAYLREKHQIMHRDVKPSNIL----------------------------------- 136
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEVLIGAGYGPAADIWST 270
++ E+ K+ D G + + D A+ + TR Y S E L G Y +DIWS
Sbjct: 137 ---VNSRGEI-----KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 188
Query: 271 ACMAFELATGDYLFDPKAGKE 291
ELA G Y P KE
Sbjct: 189 GLSLVELAIGRYPIPPPDAKE 209
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 62/261 (23%), Positives = 93/261 (35%), Gaps = 78/261 (29%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95
LG GHF V L+ + A+K +K + ARDE+ L R + T
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDI---IARDEVESLMCEKR-------IFETA 56
Query: 96 ASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQN-----VRTII 149
SE+ L+N F + H+C V E G +L+ HI R +
Sbjct: 57 NSERHPFLVNLFACFQTE-DHVCFVMEYAAGGDLMM----------HIHTDVFSEPRAVF 105
Query: 150 --KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
V+ GL YLH + +I++ D+K +N+L+ D
Sbjct: 106 YAACVVLGLQYLH-ENKIVYRDLKLDNLLL------------DTEGF------------- 139
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNAC----WIDDHFADEIQTRQYRSVEVLIGAGYGP 263
VKIAD G C D + T ++ + EVL Y
Sbjct: 140 ------------------VKIADFG-LCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTR 180
Query: 264 AADIWSTACMAFELATGDYLF 284
A D W + +E+ G+ F
Sbjct: 181 AVDWWGLGVLIYEMLVGESPF 201
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 4e-06
Identities = 54/266 (20%), Positives = 100/266 (37%), Gaps = 78/266 (29%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ V +G GHF V + + A+K++K + A + + ++ S
Sbjct: 3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQET------VSFFEEERDILS 56
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQN-VRT 147
S + +L F+ + ++ +V E G +LL L+ R Y+ ++ +
Sbjct: 57 ----ISNSPWIPQLQYAFQ----DKDNLYLVMEYQPGGDLLSLLNR--YEDQFDEDMAQF 106
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ +++ ++ +H Q +H DIKPEN+L+ D T H
Sbjct: 107 YLAELVLAIHSVH-QMGYVHRDIKPENVLI------------DRTGH------------- 140
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-------IQTRQYRSVEVLI--- 257
+K+AD G+A + A++ + T Y + EVL
Sbjct: 141 ------------------IKLADFGSAARLT---ANKMVNSKLPVGTPDYIAPEVLTTMN 179
Query: 258 ---GAGYGPAADIWSTACMAFELATG 280
YG D WS +A+E+ G
Sbjct: 180 GDGKGTYGVECDWWSLGVIAYEMIYG 205
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 24/151 (15%)
Query: 34 RKLGWGHFSTVWLS-WDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSA 91
RKLG G+F VW W +++ VA+KI+KSD + + E+ LK + K
Sbjct: 12 RKLGSGYFGEVWEGLW--KNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHK------- 62
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIK 150
+I L F + S G + ++ E+M +LL + + + + + ++ +
Sbjct: 63 -------HLISL---FAVCSV-GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMAC 111
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181
QV EG+ YL Q IH D+ NIL+ D
Sbjct: 112 QVAEGMAYLEEQ-NSIHRDLAARNILVGEDL 141
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 6e-06
Identities = 41/192 (21%), Positives = 65/192 (33%), Gaps = 55/192 (28%)
Query: 115 THICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173
+C+V +M G +L I G Q++ GL +LH Q RI++ D+KPE
Sbjct: 66 DDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH-QRRIVYRDLKPE 124
Query: 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGN 233
N+L LD +V+I+DLG
Sbjct: 125 NVL----------------------------LDD---------------HGNVRISDLGL 141
Query: 234 ACWIDDHFADEIQTRQ------YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPK 287
A + + Y + EVL G Y + D ++ C +E+ G F +
Sbjct: 142 AV----ELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197
Query: 288 AGKEYSRDDDHL 299
K +
Sbjct: 198 KEKVEKEELKRR 209
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 7e-06
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
V+ II+Q++E LN LH IIH DIK EN+L YD+ +
Sbjct: 111 VKKIIRQLVEALNDLHKH-NIIHNDIKLENVL----YDRAKD 147
|
Length = 267 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 62/260 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ ++G G + V+L+ VALK +K ++ ++ + +
Sbjct: 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDI-------- 54
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
T SE +++LL F+ ++ M + V G + L+ ++ + + R +
Sbjct: 55 --LTTTKSEWLVKLLYAFQ--DDEYLYLAMEY-VPGGDFRTLL--NNLGVLSEDHARFYM 107
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
++ E ++ LH + IH D+KPEN L+ DA+ H K +
Sbjct: 108 AEMFEAVDALH-ELGYIHRDLKPENFLI------------DASGHIK------------L 142
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWS 269
+DF L S I N+ + + Y + EVL G GY D WS
Sbjct: 143 TDFGL----------SKGIVTYANSV---------VGSPDYMAPEVLRGKGYDFTVDYWS 183
Query: 270 TACMAFELATGDYLFDPKAG 289
CM +E G F P +G
Sbjct: 184 LGCMLYEFLCG---FPPFSG 200
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 46.3 bits (109), Expect = 1e-05
Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 69/266 (25%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V +GD +Y K+G G TV+ + D+ VA+K + Q + E+++ +
Sbjct: 12 VSVGDPKK-KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ----QPKKELIINE 66
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYK 138
+ + N + ++ L+ + + G + +V E + G +L ++ +
Sbjct: 67 ILVMREN---------KNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET--- 110
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L++LH+ ++IH DIK +NIL+ G
Sbjct: 111 CMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILL--------------------G 149
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVEV 255
M D SVK+ D G I + + T + + EV
Sbjct: 150 M-----------------------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 186
Query: 256 LIGAGYGPAADIWSTACMAFELATGD 281
+ YGP DIWS MA E+ G+
Sbjct: 187 VTRKAYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 2e-05
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
+G+ ++ I +Q+LE L YLH+ +IIH D+K N+L+ +D D
Sbjct: 105 RGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDGD 148
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 63/267 (23%), Positives = 102/267 (38%), Gaps = 71/267 (26%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLL 78
V +GD +Y K+G G TV+ + D+ VA+K + Q + +EI+++
Sbjct: 12 VSVGDP-KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVM 70
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY 137
+ N H + N S V G + +V E + G +L ++ +
Sbjct: 71 R-----ENKHPNIVNYLDSYLV-------------GDELWVVMEYLAGGSLTDVVTETCM 112
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
I V ++ L+ L +LH+ ++IH DIK +NIL+
Sbjct: 113 DEGQIAAV---CRECLQALEFLHSN-QVIHRDIKSDNILL-------------------- 148
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---IQTRQYRSVE 254
GM D SVK+ D G I + + T + + E
Sbjct: 149 GM-----------------------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185
Query: 255 VLIGAGYGPAADIWSTACMAFELATGD 281
V+ YGP DIWS MA E+ G+
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 52/249 (20%), Positives = 85/249 (34%), Gaps = 90/249 (36%)
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
++ + + T+ VL+ L++LH Q +IH DIK ++IL + D +
Sbjct: 112 MNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSIL----------LTSDGR------V 154
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
KL SDF ++ ++ + + +G W+ + EV+
Sbjct: 155 KL--------SDFGFCAQVSK--EVPRRKSLVGTPYWM--------------APEVISRL 190
Query: 260 GYGPAADIWSTACMAFELATGD--YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
YG DIWS M E+ G+ Y +P
Sbjct: 191 PYGTEVDIWSLGIMVIEMVDGEPPYFNEP------------------------------- 219
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
P +RI + P K + FL ML + RA+A
Sbjct: 220 --------PLQAMKRIRDNLP--------PKLKNLHKVSPRLRSFLDRMLVRDPAQRATA 263
Query: 378 ADCLRHPWL 386
A+ L HP+L
Sbjct: 264 AELLNHPFL 272
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 4e-05
Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 69/266 (25%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
V +GD +Y K+G G TV+ + D+ VA++ + Q + E+++ +
Sbjct: 13 VSVGDPKK-KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINE 67
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYK 138
+ + N + ++ L+ + + G + +V E + G +L ++ +
Sbjct: 68 ILVMREN---------KNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTET--- 111
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L +LH+ ++IH DIK +NIL+ G
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILL--------------------G 150
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEV 255
M D SVK+ D G I + + T + + EV
Sbjct: 151 M-----------------------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 256 LIGAGYGPAADIWSTACMAFELATGD 281
+ YGP DIWS MA E+ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (107), Expect = 4e-05
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 48/266 (18%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y VI+K+G G F V+L + + F K + S + + + ++V+ V R+
Sbjct: 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAI-SYRGLKEREKSQLVIEVNVMRELK--- 70
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK---GIHIQNVR 146
+ ++R ++ F + +I M F G +L R I + YK I +
Sbjct: 71 -------HKNIVRYIDRFLNKANQKLYILMEFCDAG-DLSRNIQKC-YKMFGKIEEHAIV 121
Query: 147 TIIKQVLEGLNYLHTQC------RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
I +Q+L L Y H R++H D+KP+NI + +R + + + + + +
Sbjct: 122 DITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG---IRHIGKITAQANNLNGR 178
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI--G 258
P+ + + DF L ++ I + ++C + T Y S E+L+
Sbjct: 179 -PI---AKIGDFGL--------SKNIGIESMAHSC---------VGTPYYWSPELLLHET 217
Query: 259 AGYGPAADIWSTACMAFELATGDYLF 284
Y +D+W+ C+ +EL +G F
Sbjct: 218 KSYDDKSDMWALGCIIYELCSGKTPF 243
|
Length = 1021 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 26 FNFRY-HVIRKLGWGHFSTVWL-SWD-LQDKTF--VALKIVKSDQVYADTA--RDEIVLL 78
F R+ I++LG GHF V L +D L D T VA+K + + EI +L
Sbjct: 1 FEKRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEIL 60
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
+ + ++ V Y G + ++ E + LR +
Sbjct: 61 RTLDHENIVK---YKGVC-------------EKPGGRSLRLIMEYLPSGSLRDYLQRHRD 104
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
I+++ + Q+ +G++YL +Q R IH D+ NIL V+ +
Sbjct: 105 QINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNIL--VESED 146
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 6e-05
Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 65/264 (24%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLL 78
V IGD +Y K+G G TV+ + D+ VA+K + Q + +EI+++
Sbjct: 12 VSIGDPKK-KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVM 70
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY 137
K + + ++ L+ F + G + +V E + G +L ++ +
Sbjct: 71 KEL--------------KNPNIVNFLDSFLV----GDELFVVMEYLAGGSLTDVVTETCM 112
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
I + ++ L+ L +LH ++IH DIK +N+L+
Sbjct: 113 DEAQIA---AVCRECLQALEFLHAN-QVIHRDIKSDNVLL-------------------- 148
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
GM + L +DF A + S + +G W+ A E+ TR+
Sbjct: 149 GMDGSVKL----TDFGFC--AQITPEQSKRSTMVGTPYWM----APEVVTRK-------- 190
Query: 258 GAGYGPAADIWSTACMAFELATGD 281
YGP DIWS MA E+ G+
Sbjct: 191 --AYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 8e-05
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 55/211 (26%)
Query: 34 RKLGWGHFSTVWL-SWDLQD--KTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNV 87
+KLG G F V+ +D T VA+K +K S++ D + E ++K +G
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLK-EARVMKKLG----- 54
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLL------RLIARSDYKG- 139
H V+RLL + +V E M +LL R + S K
Sbjct: 55 H---------PNVVRLLG----VCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKST 101
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV---------RRMARD 190
+ ++++ + Q+ +G+ YL + +H D+ N L V D V R + D
Sbjct: 102 LSLKDLLSFAIQIAKGMEYLA-SKKFVHRDLAARNCL--VGEDLVVKISDFGLSRDVYDD 158
Query: 191 ATKHHKIGMKLPM------SLD----STMSD 211
K G KLP+ SL ++ SD
Sbjct: 159 DYYRKKTGGKLPIRWMAPESLKDGIFTSKSD 189
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 9e-05
Identities = 16/36 (44%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180
+R + +Q+LE LN+LH+ ++IH D+K NIL+ +D
Sbjct: 105 IRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLD 139
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ +I +LG G F V+ + + + A K++ D + D +V + + + +
Sbjct: 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPN- 63
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+++LL+ F Y N I + F G + + + + +R +
Sbjct: 64 ----------IVKLLDAF--YYENNLWILIEFCAGG--AVDAVMLELERPLTEPQIRVVC 109
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182
KQ LE LNYLH + +IIH D+K NIL +D D
Sbjct: 110 KQTLEALNYLH-ENKIIHRDLKAGNILFTLDGD 141
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVL--------EGLNYLHTQCRIIHT 168
ICM E+M +L + YK ++ I +++L + LNYL + +IIH
Sbjct: 80 ICM--ELMDISLDKF-----YKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHR 132
Query: 169 DIKPENILM 177
D+KP NIL+
Sbjct: 133 DVKPSNILL 141
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 59/259 (22%), Positives = 93/259 (35%), Gaps = 70/259 (27%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
R +I G G + V+ + VALKI+ D V +D R E+ LL
Sbjct: 5 RLELI---GRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDV-SDIQR-EVALL------ 53
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ 143
S + + + G + ++ E G ++ L+ +I
Sbjct: 54 -----SQLRQSQPPNITKYYGSY----LKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYIS 104
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
II++VL L Y+H + +IH DIK NIL+ T +
Sbjct: 105 ---VIIREVLVALKYIH-KVGVIHRDIKAANILV--------------TNTGNV------ 140
Query: 204 SLDSTMSDFSLLDPANEVYDISVK-IADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
+ DF + A + S K +G W+ A E+ + G Y
Sbjct: 141 ----KLCDFGV---AALLNQNSSKRSTFVGTPYWM----APEV---------ITEGKYYD 180
Query: 263 PAADIWSTACMAFELATGD 281
ADIWS +E+ATG+
Sbjct: 181 TKADIWSLGITIYEMATGN 199
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 3e-04
Identities = 59/264 (22%), Positives = 100/264 (37%), Gaps = 68/264 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK---IVKSDQVYADTARDEIVLLKAVGRKS 85
RY +I+K+G G F ++L+ D +K + K + ++ E++LL
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILL------- 53
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLIARSDYKGIH 141
A K ++ F + NG +F VM Y +L++ I R
Sbjct: 54 ----------AKMKHPNIVTFFASFQENGR----LFIVMEYCDGGDLMKRINRQRGVLFS 99
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ + Q+ GL ++H + +I+H DIK +NI + K GM
Sbjct: 100 EDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLS-----------------KNGMV- 140
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
+ + DF + N+ +L C + T Y S E+ Y
Sbjct: 141 -----AKLGDFGIARQLNDS-------MELAYTC---------VGTPYYLSPEICQNRPY 179
Query: 262 GPAADIWSTACMAFELATGDYLFD 285
DIWS C+ +EL T + F+
Sbjct: 180 NNKTDIWSLGCVLYELCTLKHPFE 203
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 28/148 (18%)
Query: 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++G G TV+ ALK++ D V R EI +L+ V + V
Sbjct: 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICR-EIEILRDVNHPNVVKC 137
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
E + LL S GTHI Q + +
Sbjct: 138 HDMFDHNGEIQV-LLEFMDGGSLEGTHIA----------------------DEQFLADVA 174
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILM 177
+Q+L G+ YLH + I+H DIKP N+L+
Sbjct: 175 RQILSGIAYLHRR-HIVHRDIKPSNLLI 201
|
Length = 353 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 76/366 (20%), Positives = 129/366 (35%), Gaps = 114/366 (31%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + ++LG G F TV+L D + LK++K V + +E V ++N
Sbjct: 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPV-GELNPNETV-------QANQE 52
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNL---LRLIARSDYKGIHIQN 144
+ + +++ F C++ E G +L L + + Q
Sbjct: 53 AQLLSKLDHPAIVKFHASF----LERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQV 108
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
I Q+L G++Y+H + RI+H D+K +NI +
Sbjct: 109 CEWFI-QLLLGVHYMHQR-RILHRDLKAKNIFL--------------------------- 139
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGY 261
N + +KI D G + + D T Y S E L GY
Sbjct: 140 -------------KNNL----LKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGY 182
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV-GPIPKEVLSQGKKT 320
+DIWS C+ +E+ + F G+ + L+ ++ +V GP P
Sbjct: 183 DSKSDIWSLGCILYEMCCLAHAF---EGQNF------LSVVLRIVEGPTPS--------- 224
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
L E Y + + ML+ + LR SAA+
Sbjct: 225 ------------------------LPETY------SRQLNSIMQSMLNKDPSLRPSAAEI 254
Query: 381 LRHPWL 386
LR+P++
Sbjct: 255 LRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 3e-04
Identities = 58/247 (23%), Positives = 89/247 (36%), Gaps = 92/247 (37%)
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ + T+ + VL+ L YLH+Q +IH DIK ++IL+ +D +V+
Sbjct: 117 EQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLD-GRVK----------------- 157
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
+SDF A D+ + + +G W+ + EV+ YG
Sbjct: 158 ------LSDFGFC--AQISKDVPKRKSLVGTPYWM--------------APEVISRTPYG 195
Query: 263 PAADIWSTACMAFELATGD--YLFD-PKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
DIWS M E+ G+ Y D P + RD P PK
Sbjct: 196 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-----------PPPK-------- 236
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
L+ N +I + DFL ML + RA+A +
Sbjct: 237 -LK------NAHKISPV----------------------LRDFLERMLTREPQERATAQE 267
Query: 380 CLRHPWL 386
L HP+L
Sbjct: 268 LLDHPFL 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (98), Expect = 4e-04
Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 29/154 (18%)
Query: 31 HVIRKLGWGHFSTV----WLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVG 82
+ +KLG G F V +T VA+K +K ++ R+ E ++K +
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEG--ASEEEREEFLEEASIMKKLS 59
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
H ++RLL G + +V E M L R + + +
Sbjct: 60 -----H---------PNIVRLLG----VCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTL 101
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
+++ + Q+ +G+ YL ++ +H D+ N L
Sbjct: 102 KDLLQMALQIAKGMEYLESK-NFVHRDLAARNCL 134
|
Length = 258 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 4e-04
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 49/141 (34%)
Query: 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSL 214
L++LH+ II+ D+KPENIL+ D H K+ +DF L
Sbjct: 110 ALDHLHS-LGIIYRDLKPENILL------------DEEGHIKL------------TDFGL 144
Query: 215 ----LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWST 270
+D + Y C ++ A E+ R+ G+ +AD WS
Sbjct: 145 SKESIDHEKKAYSF----------CGTVEYMAPEVVNRR----------GHTQSADWWSF 184
Query: 271 ACMAFELATGDYLFDPKAGKE 291
+ FE+ TG F K KE
Sbjct: 185 GVLMFEMLTGSLPFQGKDRKE 205
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 4e-04
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180
I ++ +++QVL GL LH + I+H DIKPEN+L+ VD
Sbjct: 308 INVIKGVMRQVLTGLRKLH-RIGIVHRDIKPENLLVTVD 345
|
Length = 507 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 4e-04
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 47/145 (32%)
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V Q+L GL +LH++ +I+H DIK N+ + DA
Sbjct: 102 QVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFL------------DA------------ 136
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEI-QTRQYRSVEVLIGAG 260
+VKI DLG A + D+ FA+ I T Y S E+
Sbjct: 137 -------------------YDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKP 177
Query: 261 YGPAADIWSTACMAFELATGDYLFD 285
Y +D+W+ + +E TG + FD
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFD 202
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 138 KGIHIQN--VRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
KG+ +N ++TI++Q+L L+ LH+ I+H D+KP+NI+
Sbjct: 248 KGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKPQNII 287
|
Length = 566 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 7e-04
Identities = 59/254 (23%), Positives = 83/254 (32%), Gaps = 63/254 (24%)
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V + +Q+L ++Y+H + IIH DIK EN+L+
Sbjct: 262 VTAVARQLLSAIDYIHGE-GIIHRDIKTENVLV--------------------------- 293
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVEVLIGA 259
N DI + D G AC+ ++ T + EVL G
Sbjct: 294 --------------NGPEDIC--LGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGD 337
Query: 260 GYGPAADIWSTACMAFELATGD-YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y P+ DIWS + FE A LF G E D + I+ E
Sbjct: 338 PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397
Query: 319 KTL--RYFTPQGNFRRIDNLKP-WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
L +Y RR +P W Y L + A F + R
Sbjct: 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTF----------DGARRP 447
Query: 376 SAADCLRHPWLNPR 389
SAA+ LR P +
Sbjct: 448 SAAELLRLPLFQSK 461
|
Length = 461 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 64/261 (24%), Positives = 102/261 (39%), Gaps = 68/261 (26%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR----DEIVLLKA 80
L NFR + +K+G G FS V+ + L D VALK V+ + AR EI LLK
Sbjct: 1 LANFR--IEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 58
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
+ + + A + +E LN +V E+ L + + K
Sbjct: 59 LNHPNVIKYYASFIEDNE-----LN-------------IVLELADAGDLSRMIKHFKKQK 100
Query: 141 HIQNVRTIIK---QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
+ +T+ K Q+ L ++H++ R++H DIKP N+ + A K +
Sbjct: 101 RLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFI---------TATGVVKLGDL 150
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
G+ S +T + SL + T Y S E +
Sbjct: 151 GLGRFFSSKTTAAH-SL------------------------------VGTPYYMSPERIH 179
Query: 258 GAGYGPAADIWSTACMAFELA 278
GY +DIWS C+ +E+A
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMA 200
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 26 FNFRY-HVIRKLGWGHFSTVWL-SWD-LQDKT--FVALKIVKSD--QVYADTARDEIVLL 78
F+ RY IR LG GHF V L +D D T VA+K +K + Q + EI +L
Sbjct: 1 FHKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINIL 60
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K + ++ V ++ K ++L+ M + +G +L + +
Sbjct: 61 KTLYHENIVKYKGCCSEQGGKGLQLI--------------MEYVPLG-SLRDYLPKHK-- 103
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
+++ + +Q+ EG+ YLH+Q IH D+ N+L +D D++
Sbjct: 104 -LNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVL--LDNDRL 145
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.001
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 66/256 (25%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGRKS 85
+ + +K+G G FS V+ + L D+ VALK V+ ++ AR EI LLK + +
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN 63
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
VI+ L+ F + +V E+ L + + K +
Sbjct: 64 --------------VIKYLDSFI----EDNELNIVLELADAGDLSQMIKYFKKQKRLIPE 105
Query: 146 RTIIK---QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
RT+ K Q+ + ++H++ R++H DIKP N+ + A K +G+
Sbjct: 106 RTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFI---------TATGVVKLGDLGLGRF 155
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
S +T + SL + T Y S E + GY
Sbjct: 156 FSSKTTAAH-SL------------------------------VGTPYYMSPERIHENGYN 184
Query: 263 PAADIWSTACMAFELA 278
+DIWS C+ +E+A
Sbjct: 185 FKSDIWSLGCLLYEMA 200
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 215 LDPANEVYDIS--VKIADLGNACWIDDHFADE-----IQTRQYRSVEVLI-GAGYGPAAD 266
L PAN + D V+I+DLG AC F+ + + T Y + EVL G Y +AD
Sbjct: 123 LKPANILLDEHGHVRISDLGLAC----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSAD 178
Query: 267 IWSTACMAFELATGDYLFDP-KAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
+S CM F+L G F K ++ D L VEL E+ S + L+
Sbjct: 179 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDV 238
Query: 326 PQ 327
+
Sbjct: 239 NR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.002
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 115 THICMVFEVMGYNLLRL-IARSDYKGIHIQNVRTII--KQVLEGLNYLHTQCRIIHTDIK 171
T +C+V +M LR I D + R Q++ GL +LH Q RII+ D+K
Sbjct: 66 TDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH-QRRIIYRDLK 124
Query: 172 PENILM 177
PEN+L+
Sbjct: 125 PENVLL 130
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 33 IRKLGWGHFSTVWLS-WDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
+RKLG G F VW W+ + T VA+K +K T + L +A K H
Sbjct: 11 LRKLGAGQFGEVWEGLWN--NTTPVAVKTLK-----PGTMDPKDFLAEAQIMKKLRH--- 60
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIK 150
K+I+L + + + I +V E+M Y +LL + + + + + +
Sbjct: 61 ------PKLIQL---YAVCTL-EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAA 110
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENIL 176
QV G+ YL Q IH D+ N+L
Sbjct: 111 QVASGMAYLEAQ-NYIHRDLAARNVL 135
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.003
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
K + + I L+GL YLH+ R IH DIK NIL+
Sbjct: 110 KPLQEVEIAAICHGALQGLAYLHSHER-IHRDIKAGNILL 148
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 45/174 (25%)
Query: 116 HICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174
H+CMV E V G + L+ + + + R + + L YLH I+H D+KP+N
Sbjct: 75 HLCMVMEYVEGGDCATLL--KNIGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDN 131
Query: 175 ILMCVDYDKVRRMARDATKH--------HKIGMKLPMSLDSTMSDFSLLDPANEVYDISV 226
+L+ + H KIG+ MSL + + + + E D V
Sbjct: 132 LLIT------------SMGHIKLTDFGLSKIGL---MSLTTNLYEGHIEKDTREFLDKQV 176
Query: 227 KIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
C ++ A E+ RQ GYG D W+ + +E G
Sbjct: 177 --------CGTPEYIAPEVILRQ----------GYGKPVDWWAMGIILYEFLVG 212
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 51/173 (29%)
Query: 117 ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175
+C+V +M G +L I G + ++ GL LH + RI++ D+KPENI
Sbjct: 75 LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENI 133
Query: 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC 235
L+ DY +R I+DLG A
Sbjct: 134 LL-DDYGHIR------------------------------------------ISDLGLAV 150
Query: 236 WIDDHFADEIQTR----QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLF 284
I + + I+ R Y + EV+ Y + D W C+ +E+ G F
Sbjct: 151 EIPE--GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPF 201
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 32 VIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSS 90
+I+KLG G F VW+ +W+ T VA+K +K + ++ +E ++K +
Sbjct: 10 LIKKLGNGQFGEVWMGTWN--GNTKVAVKTLKPGTMSPESFLEEAQIMKKL--------- 58
Query: 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIK 150
+K+++L + + S +I + G +LL + + + + + N+ +
Sbjct: 59 -----RHDKLVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKDGEGRALKLPNLVDMAA 109
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENI-----LMCVDYD-KVRRMARDATKHHKIGMKLPM 203
QV G+ Y+ + IH D++ NI L+C D + R+ D + G K P+
Sbjct: 110 QVAAGMAYIE-RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPI 167
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 115 THICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173
TH+C+V +M G +L I +G+ ++ V Q+ G+ +LH+ I++ D+KPE
Sbjct: 66 THLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS-MDIVYRDMKPE 124
Query: 174 NILM 177
N+L+
Sbjct: 125 NVLL 128
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 48/250 (19%), Positives = 94/250 (37%), Gaps = 69/250 (27%)
Query: 33 IRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++++G G F VWL W +K VA+K ++ + + +E ++ +
Sbjct: 9 VQEIGSGQFGLVWLGYW--LEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHP------- 59
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151
+L+ + + + + IC+VFE M + L R+ + + +
Sbjct: 60 ----------KLVQLYGVCTER-SPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLD 108
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
V EG+ YL + +IH D+ N L+
Sbjct: 109 VCEGMAYLESSN-VIHRDLAARNCLV---------------------------------- 133
Query: 212 FSLLDPANEVYDISVKIADLGNACWI-DDHFADEIQTR---QYRSVEVLIGAGYGPAADI 267
N+V VK++D G ++ DD + T+ ++ S EV + Y +D+
Sbjct: 134 -----GENQV----VKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDV 184
Query: 268 WSTACMAFEL 277
WS + +E+
Sbjct: 185 WSFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.004
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 60/177 (33%)
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
+++ L YLH+ C +++ D+K EN+++ DK
Sbjct: 103 EIVSALGYLHS-CDVVYRDLKLENLML----DK--------------------------- 130
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ----TRQYRSVEVLIGAGYGPAAD 266
D +KI D G C ++ T +Y + EVL YG A D
Sbjct: 131 ------------DGHIKITDFG-LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 177
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI--PKEVLSQGKKTL 321
W + +E+ G F Y++D + L ++ L+ I P+ LS K+L
Sbjct: 178 WWGLGVVMYEMMCGRLPF-------YNQDHEKLFELI-LMEEIRFPRT-LSPEAKSL 225
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 393 | |||
| KOG1290|consensus | 590 | 100.0 | ||
| KOG0667|consensus | 586 | 100.0 | ||
| KOG0615|consensus | 475 | 100.0 | ||
| KOG0593|consensus | 396 | 100.0 | ||
| KOG0661|consensus | 538 | 100.0 | ||
| KOG0575|consensus | 592 | 100.0 | ||
| KOG0663|consensus | 419 | 100.0 | ||
| KOG0659|consensus | 318 | 100.0 | ||
| KOG0581|consensus | 364 | 100.0 | ||
| KOG0600|consensus | 560 | 100.0 | ||
| KOG0671|consensus | 415 | 100.0 | ||
| KOG0598|consensus | 357 | 100.0 | ||
| KOG0660|consensus | 359 | 100.0 | ||
| KOG0592|consensus | 604 | 100.0 | ||
| KOG0616|consensus | 355 | 100.0 | ||
| KOG0605|consensus | 550 | 100.0 | ||
| KOG0583|consensus | 370 | 100.0 | ||
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| KOG0595|consensus | 429 | 100.0 | ||
| KOG0658|consensus | 364 | 100.0 | ||
| KOG0033|consensus | 355 | 100.0 | ||
| KOG0588|consensus | 786 | 100.0 | ||
| KOG0594|consensus | 323 | 100.0 | ||
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0582|consensus | 516 | 100.0 | ||
| KOG0578|consensus | 550 | 100.0 | ||
| KOG0597|consensus | 808 | 100.0 | ||
| KOG0694|consensus | 694 | 100.0 | ||
| KOG0591|consensus | 375 | 100.0 | ||
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0032|consensus | 382 | 100.0 | ||
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0198|consensus | 313 | 100.0 | ||
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0585|consensus | 576 | 100.0 | ||
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604|consensus | 400 | 100.0 | ||
| KOG0599|consensus | 411 | 100.0 | ||
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0662|consensus | 292 | 100.0 | ||
| KOG4717|consensus | 864 | 100.0 | ||
| KOG0610|consensus | 459 | 100.0 | ||
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0670|consensus | 752 | 100.0 | ||
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0666|consensus | 438 | 100.0 | ||
| KOG0580|consensus | 281 | 100.0 | ||
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0192|consensus | 362 | 100.0 | ||
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0201|consensus | 467 | 100.0 | ||
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0611|consensus | 668 | 100.0 | ||
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG0197|consensus | 468 | 100.0 | ||
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| KOG0589|consensus | 426 | 100.0 | ||
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1989|consensus | 738 | 100.0 | ||
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| KOG4279|consensus | 1226 | 100.0 | ||
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| KOG0986|consensus | 591 | 100.0 | ||
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG2345|consensus | 302 | 100.0 | ||
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0574|consensus | 502 | 100.0 | ||
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0669|consensus | 376 | 100.0 | ||
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| KOG0607|consensus | 463 | 100.0 | ||
| KOG0612|consensus | 1317 | 100.0 | ||
| KOG0690|consensus | 516 | 100.0 | ||
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0579|consensus | 1187 | 100.0 | ||
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG4236|consensus | 888 | 100.0 | ||
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| KOG0586|consensus | 596 | 100.0 | ||
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| KOG0596|consensus | 677 | 100.0 | ||
| KOG0577|consensus | 948 | 100.0 | ||
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0603|consensus | 612 | 100.0 | ||
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| KOG1187|consensus | 361 | 100.0 | ||
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0665|consensus | 369 | 100.0 | ||
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0668|consensus | 338 | 100.0 | ||
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG1026|consensus | 774 | 100.0 | ||
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG0983|consensus | 391 | 100.0 | ||
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| KOG4721|consensus | 904 | 100.0 | ||
| KOG4645|consensus | 1509 | 100.0 | ||
| KOG0584|consensus | 632 | 100.0 | ||
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| KOG1167|consensus | 418 | 100.0 | ||
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0193|consensus | 678 | 100.0 | ||
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0664|consensus | 449 | 100.0 | ||
| KOG1035|consensus | 1351 | 100.0 | ||
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG1095|consensus | 1025 | 100.0 | ||
| KOG4250|consensus | 732 | 100.0 | ||
| KOG0696|consensus | 683 | 100.0 | ||
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| KOG0587|consensus | 953 | 100.0 | ||
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0608|consensus | 1034 | 100.0 | ||
| KOG0614|consensus | 732 | 100.0 | ||
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0194|consensus | 474 | 100.0 | ||
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG4257|consensus | 974 | 100.0 | ||
| KOG4278|consensus | 1157 | 100.0 | ||
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG2052|consensus | 513 | 100.0 | ||
| KOG0199|consensus | 1039 | 100.0 | ||
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0695|consensus | 593 | 100.0 | ||
| KOG0196|consensus | 996 | 100.0 | ||
| KOG1151|consensus | 775 | 100.0 | ||
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG1027|consensus | 903 | 99.98 | ||
| KOG1006|consensus | 361 | 99.98 | ||
| KOG1094|consensus | 807 | 99.98 | ||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.97 | |
| KOG3653|consensus | 534 | 99.97 | ||
| KOG1345|consensus | 378 | 99.97 | ||
| KOG1152|consensus | 772 | 99.97 | ||
| KOG0200|consensus | 609 | 99.97 | ||
| KOG0984|consensus | 282 | 99.96 | ||
| KOG1025|consensus | 1177 | 99.96 | ||
| KOG0576|consensus | 829 | 99.96 | ||
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.95 | |
| KOG1024|consensus | 563 | 99.95 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.94 | |
| KOG1165|consensus | 449 | 99.93 | ||
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.93 | |
| KOG1163|consensus | 341 | 99.93 | ||
| KOG1164|consensus | 322 | 99.92 | ||
| KOG0590|consensus | 601 | 99.91 | ||
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.88 | |
| KOG4158|consensus | 598 | 99.87 | ||
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.87 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.87 | |
| KOG0603|consensus | 612 | 99.86 | ||
| KOG0195|consensus | 448 | 99.86 | ||
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.83 | |
| KOG1240|consensus | 1431 | 99.83 | ||
| KOG0606|consensus | 1205 | 99.82 | ||
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.81 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.78 | |
| KOG1166|consensus | 974 | 99.77 | ||
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.73 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.72 | |
| KOG1033|consensus | 516 | 99.72 | ||
| smart00090 | 237 | RIO RIO-like kinase. | 99.71 | |
| KOG1023|consensus | 484 | 99.68 | ||
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.64 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.61 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.59 | |
| KOG0590|consensus | 601 | 99.57 | ||
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.57 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.55 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.45 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.44 | |
| KOG0601|consensus | 524 | 99.42 | ||
| KOG1243|consensus | 690 | 99.35 | ||
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.25 | |
| KOG0601|consensus | 524 | 99.22 | ||
| KOG0606|consensus | 1205 | 99.19 | ||
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.16 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.14 | |
| KOG1266|consensus | 458 | 99.12 | ||
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.1 | |
| KOG3087|consensus | 229 | 99.01 | ||
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.86 | |
| KOG3741|consensus | 655 | 98.82 | ||
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.82 | |
| KOG2137|consensus | 700 | 98.79 | ||
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.74 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.66 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.64 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.52 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.5 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.34 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.27 | |
| KOG0576|consensus | 829 | 98.17 | ||
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.0 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 97.99 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 97.71 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 97.68 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 97.58 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 97.57 | |
| KOG2270|consensus | 520 | 97.52 | ||
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 97.44 | |
| KOG1035|consensus | 1351 | 97.35 | ||
| KOG1235|consensus | 538 | 97.26 | ||
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.24 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.12 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 97.0 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 96.95 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 96.59 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 96.41 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 96.2 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 96.09 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 95.98 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 95.96 | |
| KOG1093|consensus | 725 | 95.92 | ||
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 95.92 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 95.75 | |
| PLN02421 | 330 | phosphotransferase, alcohol group as acceptor/kina | 95.65 | |
| PLN02236 | 344 | choline kinase | 95.57 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 95.44 | |
| KOG2268|consensus | 465 | 95.18 | ||
| PRK10593 | 297 | hypothetical protein; Provisional | 94.82 | |
| PTZ00384 | 383 | choline kinase; Provisional | 94.7 | |
| cd05152 | 276 | MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH | 94.51 | |
| COG5072 | 488 | ALK1 Serine/threonine kinase of the haspin family | 94.29 | |
| PRK11768 | 325 | serine/threonine protein kinase; Provisional | 94.1 | |
| KOG1826|consensus | 2724 | 93.04 | ||
| PTZ00296 | 442 | choline kinase; Provisional | 92.82 | |
| KOG1236|consensus | 565 | 92.48 | ||
| PF07387 | 308 | Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099 | 89.66 | |
| PHA03111 | 444 | Ser/Thr kinase; Provisional | 89.63 | |
| KOG2269|consensus | 531 | 89.06 | ||
| TIGR02906 | 313 | spore_CotS spore coat protein, CotS family. Member | 88.92 | |
| PF03881 | 288 | Fructosamin_kin: Fructosamine kinase; InterPro: IP | 87.6 | |
| PF05445 | 434 | Pox_ser-thr_kin: Poxvirus serine/threonine protein | 87.5 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 86.84 | |
| PRK10271 | 188 | thiK thiamine kinase; Provisional | 86.78 | |
| COG0510 | 269 | ycfN Thiamine kinase and related kinases [Coenzyme | 84.48 |
| >KOG1290|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-64 Score=457.65 Aligned_cols=380 Identities=53% Similarity=0.978 Sum_probs=330.0
Q ss_pred cccccccCCCCCCccccccCCeeC-CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhc
Q psy12288 4 DQQESYMEYRPGGYCPVQIGDLFN-FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVG 82 (393)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~ 82 (393)
+++|...+|++|||||++|||.|+ .||.+.++||+|.|+.||+|++..+.+.||+|+.+......+...+|+.+|+.+.
T Consensus 53 ~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~ 132 (590)
T KOG1290|consen 53 EEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVR 132 (590)
T ss_pred ccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999998 9999999999999999999999999999999999988888899999999999998
Q ss_pred ccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
..+..+ ....+||++++.|...++++.|+|||+|++|.+|+.++......+++...++.|+.||+.||.|||..
T Consensus 133 ~~Dp~~------~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e 206 (590)
T KOG1290|consen 133 EGDPND------PGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE 206 (590)
T ss_pred hcCCCC------CCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 776332 26778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhc-cccc--------------------------------------------
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATK-HHKI-------------------------------------------- 197 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~-~~~~-------------------------------------------- 197 (393)
|||+|.||||+|||+..+.........+... ....
T Consensus 207 cgIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~ 286 (590)
T KOG1290|consen 207 CGIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEA 286 (590)
T ss_pred cCccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhh
Confidence 9999999999999997663222222222210 0000
Q ss_pred ------------------------CCcCCC---CCC-CC--CCC------------------------------------
Q psy12288 198 ------------------------GMKLPM---SLD-ST--MSD------------------------------------ 211 (393)
Q Consensus 198 ------------------------~~~~~~---~~~-~~--~~~------------------------------------ 211 (393)
+..... ... .. ++.
T Consensus 287 ~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~ 366 (590)
T KOG1290|consen 287 SLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLS 366 (590)
T ss_pred hhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhccccccccccccc
Confidence 000000 000 00 000
Q ss_pred ------------CCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh
Q psy12288 212 ------------FSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT 279 (393)
Q Consensus 212 ------------~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~ 279 (393)
.-........+..++|+.|||.|++.....+..+.|..|+|||++.+++|++.+||||++|+.|||+|
T Consensus 367 s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaT 446 (590)
T KOG1290|consen 367 SPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELAT 446 (590)
T ss_pred CcCCccccccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhc
Confidence 00001112445678999999999999988889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHH
Q psy12288 280 GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDF 359 (393)
Q Consensus 280 g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (393)
|-++|.+.+...+.++.++++.|++++|.+|..+...++-...||+..+..+.+..++.|....++.++++|+.+.+.+|
T Consensus 447 GDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~f 526 (590)
T KOG1290|consen 447 GDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQF 526 (590)
T ss_pred CceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 360 ADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 360 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+|+.-||.++|++||||.++|+|||++.+
T Consensus 527 sdFL~PmLef~PeKR~tA~~cl~hPwLn~~ 556 (590)
T KOG1290|consen 527 SDFLSPMLEFDPEKRPTAAQCLKHPWLNPV 556 (590)
T ss_pred HHHHHHHHhcCccccccHHHHhcCccccCC
Confidence 999999999999999999999999999964
|
|
| >KOG0667|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-53 Score=402.75 Aligned_cols=311 Identities=32% Similarity=0.556 Sum_probs=266.3
Q ss_pred cccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 18 CPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..+-.+|.++.+|.|.+.||+|+||.|-+|++..|++.||||++++......+...|+.+|..+.....- +-
T Consensus 176 Y~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~--------~~ 247 (586)
T KOG0667|consen 176 YQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPD--------DK 247 (586)
T ss_pred eeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCC--------CC
Confidence 4566788999999999999999999999999999999999999999888888889999999999743322 55
Q ss_pred ccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
-|++++++.|. ..+|+|||+|.++.+|.++++.....+++...++.++.||+.||.+||+. ||+|+||||+|||+
T Consensus 248 ~n~Vrm~d~F~----fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL 322 (586)
T KOG0667|consen 248 YNIVRMLDYFY----FRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILL 322 (586)
T ss_pred eeEEEeeeccc----cccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheee
Confidence 68999999998 78899999999999999999998888999999999999999999999997 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~ 257 (393)
..... ..+|++|||+++.........+.+..|+|||++.
T Consensus 323 ~~~~r-----------------------------------------~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVIL 361 (586)
T KOG0667|consen 323 KDPKR-----------------------------------------SRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVIL 361 (586)
T ss_pred ccCCc-----------------------------------------CceeEEecccccccCCcceeeeeccccccchhhc
Confidence 65542 2599999999998887777889999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC-CCCee--ecc
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP-QGNFR--RID 334 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~ 334 (393)
+.+|+.+.||||||||+.||++|.+.|++.+ ..++++.|++++|.+|..++....+...+|+. .+..+ ...
T Consensus 362 GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n------e~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~ 435 (586)
T KOG0667|consen 362 GLPYDTAIDMWSLGCILAELFTGEPLFPGDN------EYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVET 435 (586)
T ss_pred cCCCCCccceeehhhhHHhHhcCccccCCCC------HHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeee
Confidence 9999999999999999999999999999999 89999999999999999999999999999988 44332 111
Q ss_pred CCCc-------chhHHHHhhh--c---------cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 335 NLKP-------WGLYQVLTEK--Y---------HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 335 ~~~~-------~~~~~~~~~~--~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.... +......... . .+.......|+|||.+||.+||.+|+|+.|+|+||||..
T Consensus 436 ~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 436 SAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred cccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 1110 0000000000 0 112245678899999999999999999999999999984
|
|
| >KOG0615|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-53 Score=378.93 Aligned_cols=257 Identities=30% Similarity=0.455 Sum_probs=215.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--------chhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--------ADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.+++.|.+.+.||+|+||.|-+|..+.|++.||||++++.... ...+.+|+++|+.+ .
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL--------------~ 234 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL--------------S 234 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc--------------C
Confidence 4788999999999999999999999999999999999753221 23357999999999 9
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
||+|+++.+.|. ...+.||||||+ ||+|++.+.... .+.++..+-++.|++.|+.|||++ ||+||||||+||
T Consensus 235 HP~IV~~~d~f~----~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNI 307 (475)
T KOG0615|consen 235 HPNIVRIKDFFE----VPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENI 307 (475)
T ss_pred CCCEEEEeeeee----cCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceE
Confidence 999999999998 677889999999 999999998764 488888999999999999999999 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchh
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aP 253 (393)
|+..+.. +..+|++|||+|...+ +...+.+||+.|.||
T Consensus 308 Ll~~~~e----------------------------------------~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAP 347 (475)
T KOG0615|consen 308 LLSNDAE----------------------------------------DCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAP 347 (475)
T ss_pred EeccCCc----------------------------------------ceEEEecccchhhccccceehhhhcCCccccCh
Confidence 9977643 2259999999999774 456788999999999
Q ss_pred HHHhcCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 254 EVLIGAG---YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 254 E~~~~~~---~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
|++.+.+ ++.++|+||+||++|-+++|.+||.+...... ...
T Consensus 348 EVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-----l~e------------------------------ 392 (475)
T KOG0615|consen 348 EVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-----LKE------------------------------ 392 (475)
T ss_pred hheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-----HHH------------------------------
Confidence 9999875 35588999999999999999999975543210 011
Q ss_pred eeccCCCcchhHHHHhhhc----cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKY----HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
++.+.++ ..+...+.+.++||.+||..||++|||++|+|+||||+..
T Consensus 393 ------------QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 393 ------------QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred ------------HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence 1111111 1236788999999999999999999999999999999964
|
|
| >KOG0593|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=356.51 Aligned_cols=281 Identities=29% Similarity=0.472 Sum_probs=234.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|+.+.++|+|+||+||+|+++.||+.||||.+..++ ...+-..+|+.+|+.+ .|+|+|.++
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL--------------kH~NLVnLi 67 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL--------------KHENLVNLI 67 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc--------------ccchHHHHH
Confidence 47899999999999999999999999999999887543 3345568999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+|. ....+++|||||..++++.+.+.. .+++.+.+..++.|++.|+.|+|++ +++||||||+|||++.++
T Consensus 68 EVFr----rkrklhLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~g--- 138 (396)
T KOG0593|consen 68 EVFR----RKRKLHLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNG--- 138 (396)
T ss_pred HHHH----hcceeEEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCC---
Confidence 9997 667799999999999999988765 5699999999999999999999999 999999999999999887
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhc-CC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIG-AG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~ 260 (393)
.+||||||+|+.+.. ..+..+.|.+|+|||.+.+ .+
T Consensus 139 ----------------------------------------vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtq 178 (396)
T KOG0593|consen 139 ----------------------------------------VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQ 178 (396)
T ss_pred ----------------------------------------cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCc
Confidence 499999999997753 3455678999999999998 67
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.++||||+||++.||++|.+.|++.+ +.+++-.|...+|.+++.-.. .|..+.-+....-..+ .
T Consensus 179 YG~pVDiWAiGCv~aEl~~G~pL~PG~S------DiDQLy~I~ktLG~L~prhq~-------iF~~N~~F~Gv~lP~~-~ 244 (396)
T KOG0593|consen 179 YGKPVDIWAIGCVFAELLTGEPLWPGRS------DIDQLYLIRKTLGNLIPRHQS-------IFSSNPFFHGVRLPEP-E 244 (396)
T ss_pred CCCcccchhhhHHHHHHhcCCcCCCCcc------hHHHHHHHHHHHcccCHHHHH-------HhccCCceeeeecCCC-C
Confidence 9999999999999999999999999988 899999999999997764432 3333333322211111 1
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+-++.++ ...+..++||+++||..||.+|++.+|++.||||.+
T Consensus 245 ~~epLe~k~---p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 245 HPEPLERKY---PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred Cccchhhhc---ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 111222222 244568889999999999999999999999999944
|
|
| >KOG0661|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-52 Score=378.02 Aligned_cols=284 Identities=29% Similarity=0.483 Sum_probs=232.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhh--HHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA--RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~--~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+-++|+++++||.|+||.||+|....+++.||||.+++....-++. .+|+..|+++. .|+||+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln-------------~hpniikL 74 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-------------PHPNIIKL 74 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC-------------CCCcchhh
Confidence 4579999999999999999999999999999999998654433333 57999999981 49999999
Q ss_pred cccceeecCCCe-EEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGT-HICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~-~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
..++. +++ .+++|||+|..+|..++..+ ...|++..++.||.||+.||+++|++ |+.|||+||+|||+..+.
T Consensus 75 ~Evi~----d~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~- 147 (538)
T KOG0661|consen 75 KEVIR----DNDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGND- 147 (538)
T ss_pred HHHhh----ccCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccc-
Confidence 99887 333 89999999999999999888 56799999999999999999999998 999999999999997544
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.+||+|||+|+... .+.+..+-|.+|+|||++....
T Consensus 148 ------------------------------------------~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~ 185 (538)
T KOG0661|consen 148 ------------------------------------------VIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSG 185 (538)
T ss_pred ------------------------------------------eeEecccccccccccCCCcchhhhcccccchHHhhhcc
Confidence 49999999999775 3466778899999999998765
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
|+.+.|+|++||+++|+++-++.|++.+ +.+++..|-+++|......+..+.+.....+ -..+...+.
T Consensus 186 ~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s------E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn-----f~~P~~~~~ 254 (538)
T KOG0661|consen 186 YYSSPVDMWAVGCIMAELYSLRPLFPGAS------EIDQIYKICEVLGTPDKDSWPEGYNLASAMN-----FRFPQVKPS 254 (538)
T ss_pred ccCCchHHHHHHHHHHHHHHhcccCCCCc------HHHHHHHHHHHhCCCccccchhHHHHHHHhc-----cCCCcCCCC
Confidence 7999999999999999999999999999 8999999999999876655544321111100 011111111
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+... + ...+.++.++|.+||.|||.+||||.|+|+||||...
T Consensus 255 ~l~~L------~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 255 PLKDL------L-PNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred ChHHh------C-cccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 11111 1 2367889999999999999999999999999999754
|
|
| >KOG0575|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-50 Score=376.45 Aligned_cols=255 Identities=26% Similarity=0.462 Sum_probs=222.9
Q ss_pred cCCeeC----CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec----ccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 22 IGDLFN----FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS----DQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 22 ~~~~~~----~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
+|+.|. .+|.+.+.||+|||+.||.+++..+|+.||+|++.+ .....+++.+|+++.+.+
T Consensus 8 ip~~i~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L------------ 75 (592)
T KOG0575|consen 8 IPEVIEDPRSKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL------------ 75 (592)
T ss_pred CCCeeecCCcceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc------------
Confidence 455554 489999999999999999999999999999999876 556678899999999999
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
.|+|||++++.|+ +..++|||.|+| .++|..++.++ ..+++.+++.++.||+.||.|||++ +|+|||||.
T Consensus 76 --~HpnIV~f~~~FE----Ds~nVYivLELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKL 146 (592)
T KOG0575|consen 76 --KHPNIVQFYHFFE----DSNNVYIVLELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKL 146 (592)
T ss_pred --CCCcEEeeeeEee----cCCceEEEEEecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhc-Cceecccch
Confidence 8999999999998 788899999999 78888888755 4599999999999999999999998 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQ 249 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~ 249 (393)
.|++++.+.+ +|++|||+|..+. ....+.+|||.
T Consensus 147 GNlfL~~~~~-------------------------------------------VKIgDFGLAt~le~~~Erk~TlCGTPN 183 (592)
T KOG0575|consen 147 GNLFLNENMN-------------------------------------------VKIGDFGLATQLEYDGERKKTLCGTPN 183 (592)
T ss_pred hheeecCcCc-------------------------------------------EEecccceeeeecCcccccceecCCCc
Confidence 9999998873 9999999998775 34567799999
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|.|||++...+++..+||||+||+||-|++|++||...+. .+.+.
T Consensus 184 YIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v------kety~----------------------------- 228 (592)
T KOG0575|consen 184 YIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV------KETYN----------------------------- 228 (592)
T ss_pred ccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH------HHHHH-----------------------------
Confidence 9999999999999999999999999999999999975542 22222
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.+....+.+|...+..+.+||++||..||.+|||++++|.|+||+.
T Consensus 229 -------------~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 229 -------------KIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred -------------HHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 2333445566677889999999999999999999999999999954
|
|
| >KOG0663|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-50 Score=350.09 Aligned_cols=284 Identities=25% Similarity=0.354 Sum_probs=235.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.|+.+.+|++|+||+||+|++..|++.||+|.++.+. ...-...+|+.+|..+ .|+||+.+-
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~--------------~H~NIV~vk 141 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA--------------RHPNIVEVK 141 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc--------------CCCCeeeeE
Confidence 57999999999999999999999999999999987543 3344558999999999 799999988
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+.. +.+-+.+|||||||..+|..++.... ++|...+++.++.|++.|++|||.+ .|+|||||++|+|++..+
T Consensus 142 EVVv--G~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G--- 214 (419)
T KOG0663|consen 142 EVVV--GSNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKG--- 214 (419)
T ss_pred EEEe--ccccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCC---
Confidence 7765 44566799999999999999987765 5799999999999999999999998 999999999999998777
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~- 260 (393)
.+|++|||+|+.++.+ .+..+-|.+|+|||++.+.+
T Consensus 215 ----------------------------------------~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~t 254 (419)
T KOG0663|consen 215 ----------------------------------------ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKT 254 (419)
T ss_pred ----------------------------------------cEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcc
Confidence 4999999999998876 45556799999999999975
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|++++|+||+|||+.||+.+++.|++.+ +.+++..|..++|......|....+.- .++.......+.
T Consensus 255 yst~iDMWSvGCI~aE~l~~kPlf~G~s------E~dQl~~If~llGtPte~iwpg~~~lp-----~~k~~~f~~~py-- 321 (419)
T KOG0663|consen 255 YSTAVDMWSVGCIFAELLTQKPLFPGKS------EIDQLDKIFKLLGTPSEAIWPGYSELP-----AVKKMTFSEHPY-- 321 (419)
T ss_pred cCcchhhhhHHHHHHHHHhcCCCCCCCc------hHHHHHHHHHHhCCCccccCCCccccc-----hhhccccCCCCc--
Confidence 8999999999999999999999999988 889999999999998776654432211 011111111222
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+..+++... .+...++|+..+|.+||.+|.||+|.|+|+||+.
T Consensus 322 --n~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 322 --NNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred --hhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 22333333222 5678889999999999999999999999999987
|
|
| >KOG0659|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=338.91 Aligned_cols=278 Identities=29% Similarity=0.470 Sum_probs=232.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|...+++|+|+||.||+|++..||+.||||.++.. ........+|+.+|+.+ .|+||+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel--------------~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL--------------KHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc--------------cCcchhhhh
Confidence 5799999999999999999999999999999998754 23356678999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
++|. ..+.+.+|+||+..+|...+.... -.++...+..++.++++|++|||.+ .|+||||||.|+|++.++
T Consensus 68 D~F~----~~~~l~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g--- 138 (318)
T KOG0659|consen 68 DVFP----HKSNLSLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDG--- 138 (318)
T ss_pred hhcc----CCCceEEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCC---
Confidence 9998 677799999999999999887654 4588999999999999999999998 999999999999999888
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~- 260 (393)
.+|++|||+++.++... ...+-|.+|+|||.+.|++
T Consensus 139 ----------------------------------------~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~ 178 (318)
T KOG0659|consen 139 ----------------------------------------QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQ 178 (318)
T ss_pred ----------------------------------------cEEeecccchhccCCCCcccccceeeeeccChHHhccchh
Confidence 49999999999876543 2336799999999999975
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+..+|+||.||++.||+.|.+.|++.+ +.+++..+...+|..-++.|......-.+-.-. ..+....
T Consensus 179 Yg~~VDmWavGCI~AELllr~P~fpG~s------DidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~----~~P~~~~-- 246 (318)
T KOG0659|consen 179 YGTGVDMWAVGCIFAELLLRVPFFPGDS------DIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ----QFPKPPL-- 246 (318)
T ss_pred cCCcchhhhHHHHHHHHHccCCCCCCCc------hHHHHHHHHHHcCCCCcccCccccccccHHHHh----cCCCCcc--
Confidence 8999999999999999999999999988 999999999999987777666544432221110 0000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+=..++.+++||+.+||.+||.+|+|++|+|+|+||+.
T Consensus 247 --------~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 247 --------NNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred --------ccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 0011345667799999999999999999999999999985
|
|
| >KOG0581|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-50 Score=356.76 Aligned_cols=256 Identities=27% Similarity=0.406 Sum_probs=214.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEe--cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+.+.++.||+|+.|.||+|.|+.|++.+|+|++. .++....++.+|+++++.. .||+|+.+++.
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~--------------~spyIV~~yga 145 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC--------------QSPYIVGFYGA 145 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC--------------CCCCeeeEeEE
Confidence 6778899999999999999999999999999884 4455667789999999999 89999999999
Q ss_pred ceeecCCCe-EEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 107 FKIYSRNGT-HICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 107 ~~~~~~~~~-~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
|. .+. .+.|+|||| +|+|...+... +.+++....+++.++++||.|||+..+|+||||||+|||++..++
T Consensus 146 F~----~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe-- 217 (364)
T KOG0581|consen 146 FY----SNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE-- 217 (364)
T ss_pred EE----eCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC--
Confidence 98 444 699999999 67777776654 559999999999999999999996339999999999999987774
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
+||||||.+..+..+ ....+||..|||||.+.+..|+.
T Consensus 218 -----------------------------------------VKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~ 256 (364)
T KOG0581|consen 218 -----------------------------------------VKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSV 256 (364)
T ss_pred -----------------------------------------EEeccccccHHhhhhhcccccccccccChhhhcCCcCCc
Confidence 999999999877544 46789999999999999999999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++||||||+.++|+++|++||..... . ..+.+..+.. +.++.|.
T Consensus 257 ~sDIWSLGLsllE~a~GrfP~~~~~~-~---~~~~~~Ll~~Iv~~ppP~------------------------------- 301 (364)
T KOG0581|consen 257 KSDIWSLGLSLLELAIGRFPYPPPNP-P---YLDIFELLCAIVDEPPPR------------------------------- 301 (364)
T ss_pred ccceecccHHHHHHhhCCCCCCCcCC-C---CCCHHHHHHHHhcCCCCC-------------------------------
Confidence 99999999999999999999976521 1 1122222222 2223222
Q ss_pred HHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
++.+ ++++|.+|+.+||..||.+||++.|+++|||+++..
T Consensus 302 --------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 302 --------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred --------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 3444 788999999999999999999999999999998643
|
|
| >KOG0600|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=364.16 Aligned_cols=280 Identities=29% Similarity=0.481 Sum_probs=232.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+.|+.+++||+|+||.||+|++..||+.||+|.+..+ ........+|+.+|+++ .|+||+++
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l--------------~HpNIikL 181 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL--------------DHPNIIKL 181 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc--------------CCCcccce
Confidence 46899999999999999999999999999999988643 34455568999999999 99999999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+.... +....+|+|||||..+|.-++.... -.|++.++..+|.||+.||+|||.+ ||+|||||.+|||+|.++
T Consensus 182 ~eivt~--~~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G-- 255 (560)
T KOG0600|consen 182 EEIVTS--KLSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNG-- 255 (560)
T ss_pred eeEEEe--cCCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCC--
Confidence 998873 2456899999999999998886643 3499999999999999999999998 999999999999999887
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|||+|+.+.. ..+..+-|++|+|||++.+.
T Consensus 256 -----------------------------------------~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~ 294 (560)
T KOG0600|consen 256 -----------------------------------------VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGA 294 (560)
T ss_pred -----------------------------------------CEEeccccceeeccCCCCcccccceEEeeccChHHhcCC
Confidence 499999999996643 35566779999999999997
Q ss_pred -CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc-cccccCCCCCeeeccCCC
Q psy12288 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK-TLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 -~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 337 (393)
.|+.++|+||+||||.||+.|+++|++.+ +.+++..|+++.|.+..+.|...+. ....|.+....
T Consensus 295 t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t------EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y------- 361 (560)
T KOG0600|consen 295 TSYGTAVDLWSVGCILAELFLGKPILQGRT------EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPY------- 361 (560)
T ss_pred cccccceeehhhhHHHHHHHcCCCCcCCcc------HHHHHHHHHHHhCCCChhccccccCCcccccCCCCcc-------
Confidence 58999999999999999999999999888 8999999999999988877662211 11222221111
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
...+.+.+ ...+...++|+..||+.||.+|.||.++|+|+||.
T Consensus 362 ----~r~l~E~~---~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 362 ----KRRLRETF---KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred ----cchHHHHh---ccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence 11222322 24557788999999999999999999999999994
|
|
| >KOG0671|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=354.96 Aligned_cols=330 Identities=28% Similarity=0.490 Sum_probs=258.0
Q ss_pred cccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 18 CPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..-+.||++..+|.+++.+|+|+||.|-.+++..++..||||+++.-....+...-|+++|+.+...... +-
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~--------g~ 150 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPN--------GK 150 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCC--------Cc
Confidence 3457899999999999999999999999999999999999999998777778888999999999655432 33
Q ss_pred ccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
..++.+.+.|. ..++.|||+|.+|.++++++......+++.+.++.+..|++++++|||+. +++|.||||+|||+
T Consensus 151 ~rcv~m~~wFd----yrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILf 225 (415)
T KOG0671|consen 151 FRCVQMRDWFD----YRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILF 225 (415)
T ss_pred eEEEeeehhhh----ccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEE
Confidence 44677777776 67899999999999999999998888899999999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~ 257 (393)
....+... ...+ .. ...........++++|||.|.........-+.|..|+|||++.
T Consensus 226 vss~~~~~----------~~~k---------~~----~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL 282 (415)
T KOG0671|consen 226 VSSEYFKT----------YNPK---------KK----VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL 282 (415)
T ss_pred eccceEEE----------eccC---------Cc----cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchhee
Confidence 54432100 0000 00 0000111122489999999998877777888999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+.+++..+||||+|||++|+++|...|+..+ ..++++++..++|++|.....+.. ..++|... .....+...
T Consensus 283 gLGwS~pCDvWSiGCIL~ElytG~~LFqtHe------n~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~-rldw~e~~~ 354 (415)
T KOG0671|consen 283 GLGWSQPCDVWSIGCILVELYTGETLFQTHE------NLEHLAMMERILGPIPSRMIKKTR-KEKYFRRG-RLDWPEVSS 354 (415)
T ss_pred ccCcCCccCceeeeeEEEEeeccceecccCC------cHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcc-cccCccccc
Confidence 9999999999999999999999999998777 889999999999999998887764 22222222 222111111
Q ss_pred cchhHHHHh------hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLT------EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
......+++ .-..-.+.+...++|||++||.+||.+|+|+.|+|.||||+....
T Consensus 355 ~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~~ 414 (415)
T KOG0671|consen 355 KGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLTP 414 (415)
T ss_pred cccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCCC
Confidence 111111110 001123567788999999999999999999999999999997654
|
|
| >KOG0598|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=348.68 Aligned_cols=251 Identities=24% Similarity=0.391 Sum_probs=215.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-++|+++++||+|+||.||.++...|++.+|+|++++.. ........|..+|..+ .||.+++
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v--------------~hPFiv~ 89 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI--------------KHPFIVK 89 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC--------------CCCcEee
Confidence 368999999999999999999999999999999998643 2345678899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+...|+ +...+|+|++|+ ||.|+..+.+. +.++++.++.++.+|+.||.|||+. ||+||||||+|||++.++
T Consensus 90 l~ysFQ----t~~kLylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~G 162 (357)
T KOG0598|consen 90 LIYSFQ----TEEKLYLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQG 162 (357)
T ss_pred eEEecc----cCCeEEEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCC
Confidence 999999 788899999999 88999998765 4599999999999999999999998 999999999999999988
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~ 258 (393)
. ++|+|||++... +......+||+.|||||++.+
T Consensus 163 H-------------------------------------------i~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~ 199 (357)
T KOG0598|consen 163 H-------------------------------------------IKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLG 199 (357)
T ss_pred c-------------------------------------------EEEeccccchhcccCCCccccccCCccccChHHHhc
Confidence 4 999999999843 234556799999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.+|+.++|+||||+++|+|++|.+||.+.+.. ...+.
T Consensus 200 ~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~------------------------------------- 236 (357)
T KOG0598|consen 200 KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDK------------------------------------- 236 (357)
T ss_pred CCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHH-------------------------------------
Confidence 99999999999999999999999999876622 11122
Q ss_pred chhHHHHhhhc-cCChhhHHHHHHHHHhccccCCCCCc----CHHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKY-HWSKAEASDFADFLLPMLHVNQKLRA----SAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~ell~hp~~~~~ 389 (393)
+.+.+. ..+.-.+....++++++|+.||++|. ++.++-+||||+++
T Consensus 237 -----I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 237 -----ILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred -----HhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 222221 12233677889999999999999996 68999999999976
|
|
| >KOG0660|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-49 Score=348.13 Aligned_cols=286 Identities=30% Similarity=0.494 Sum_probs=235.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe---cccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+..+|...+.||.|+||+|+.|.+..+|+.||||.+. .+....++..+|+.+|+.+ .|+||+.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~--------------~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL--------------RHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh--------------cCCCcce
Confidence 3567777899999999999999999999999999776 3445578889999999999 7999999
Q ss_pred cccccee-ecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKI-YSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~-~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+++.. ...+-.-+|+|+|+|+.+|...+..+ ..++.+.+..++.|++.||+|+|+. +++||||||.|++++.|.
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADC 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCC
Confidence 9998875 22244569999999999999998775 3489999999999999999999997 999999999999998887
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCCCCCCCCCchhHHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFADEIQTRQYRSVEVL 256 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~~~~t~~y~aPE~~ 256 (393)
. +|++|||+|+... ...+..+-|.+|+|||++
T Consensus 163 ~-------------------------------------------lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPEll 199 (359)
T KOG0660|consen 163 D-------------------------------------------LKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELL 199 (359)
T ss_pred C-------------------------------------------EEeccccceeeccccCcccchhcceeeeeecCHHHH
Confidence 4 8999999999873 344667889999999998
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc--cccccCCCCCeeec
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK--TLRYFTPQGNFRRI 333 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~ 333 (393)
... .|+.+.||||+||||.||++|++.|++.+ ...++..+..+.|.++.+.+..... ..++.. ..
T Consensus 200 l~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d------~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~------sl 267 (359)
T KOG0660|consen 200 LNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD------YVHQLQLILELLGTPSEEDLQKIRSEKARPYIK------SL 267 (359)
T ss_pred hccccccchhhhhhhhHHHHHHHcCCCCCCCCc------hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHH------hC
Confidence 764 69999999999999999999999999888 8889999999999998887765431 111111 11
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
+..++.....++ ...++.+++|+.+||.+||.+|+|++|+|+||||....
T Consensus 268 p~~p~~~f~~~f-------p~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 268 PQIPKQPFSSIF-------PNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred CCCCCCCHHHHc-------CCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 111111112222 24567888999999999999999999999999998654
|
|
| >KOG0592|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-48 Score=356.37 Aligned_cols=252 Identities=25% Similarity=0.398 Sum_probs=221.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+|.+++.||+|+|+.|++|+...+++.+|||++.+.- ...+.+..|-.+|..|. .||.|+++
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-------------~hPgivkL 139 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-------------GHPGIVKL 139 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-------------CCCCeEEE
Confidence 58999999999999999999999999999999987532 33456778888999984 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+..|+ +...+|.|+||+ +|+|++++.+. +.|++..++.++.||+.||+|||.+ ||+||||||+|||++.|+
T Consensus 140 y~TFQ----D~~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dm- 211 (604)
T KOG0592|consen 140 YFTFQ----DEESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDG- 211 (604)
T ss_pred EEEee----cccceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCC-
Confidence 99998 667799999999 99999999876 5699999999999999999999998 999999999999999998
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------CCCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------------FADEIQ 246 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------------~~~~~~ 246 (393)
+++|+|||.|..+... ....+|
T Consensus 212 ------------------------------------------hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVG 249 (604)
T KOG0592|consen 212 ------------------------------------------HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVG 249 (604)
T ss_pred ------------------------------------------cEEEeeccccccCChhhccccCccCcccccCcccceee
Confidence 4999999998766321 134689
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
|..|.+||++.....+..+|+|+|||++|.|+.|.+||.+.+ +...+++|+.+
T Consensus 250 TAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N------eyliFqkI~~l--------------------- 302 (604)
T KOG0592|consen 250 TAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN------EYLIFQKIQAL--------------------- 302 (604)
T ss_pred eecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc------HHHHHHHHHHh---------------------
Confidence 999999999999999999999999999999999999999877 44555555554
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.+.|+.+.++.+.+||+++|..||.+|+|++||-+||||.++.
T Consensus 303 ---------------------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 303 ---------------------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred ---------------------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 4456667778999999999999999999999999999999863
|
|
| >KOG0616|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-48 Score=334.19 Aligned_cols=252 Identities=26% Similarity=0.426 Sum_probs=225.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-++|++++.||.|+||.|-+++++.+|..+|+|++.+... ..+...+|..+|+.+ .||.+++
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v--------------~~PFlv~ 108 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV--------------SHPFLVK 108 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc--------------cCceeEE
Confidence 3579999999999999999999999999999999986432 246668899999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. +..++++||||+ ||.++.++.+. +++++..++.++.||+.||+|||+. +|++|||||+|||+|.++
T Consensus 109 l~~t~~----d~~~lymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G 181 (355)
T KOG0616|consen 109 LYGTFK----DNSNLYMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNG 181 (355)
T ss_pred EEEeec----cCCeEEEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCC
Confidence 999998 788999999999 88999998776 4599999999999999999999998 999999999999999988
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
. +|++|||.|........+.+|||.|+|||++...++
T Consensus 182 ~-------------------------------------------iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~y 218 (355)
T KOG0616|consen 182 H-------------------------------------------IKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGY 218 (355)
T ss_pred c-------------------------------------------EEEEeccceEEecCcEEEecCCccccChHHhhcCCC
Confidence 5 999999999988877778899999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|.|||||++|||+.|++||.+.++.. . .
T Consensus 219 nkavDWWalGVLIYEMlaG~pPF~~~~~~~------i------------------------------------------Y 250 (355)
T KOG0616|consen 219 NKAVDWWALGVLIYEMLAGYPPFYDDNPIQ------I------------------------------------------Y 250 (355)
T ss_pred CcchhHHHHHHHHHHHHcCCCCCcCCChHH------H------------------------------------------H
Confidence 999999999999999999999998766321 1 2
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
.+++..+..||.-.+.++.+|++++|+.|-.+|. ..+++..||||+++.
T Consensus 251 ~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 251 EKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred HHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 3566677788889999999999999999999994 578999999999863
|
|
| >KOG0605|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-47 Score=353.48 Aligned_cols=253 Identities=24% Similarity=0.436 Sum_probs=210.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|+++++||+|+||.||+|+.+.||..+|+|+++++... ...+..|-.+|... .++.+|+
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~--------------ds~~vVK 205 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV--------------DSPWVVK 205 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc--------------CCCcEEE
Confidence 36899999999999999999999999999999999876433 45567788888876 8899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++..|+ +..++|+||||+ ||+.-.++.+. ..++++.++.++.+++.|+..||+. |++||||||+|+|+|..|
T Consensus 206 LyYsFQ----D~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~G 278 (550)
T KOG0605|consen 206 LYYSFQ----DKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKG 278 (550)
T ss_pred EEEEec----CCCeeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCC
Confidence 999999 888999999999 88888888776 4599999999999999999999998 999999999999999888
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------------------
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------------------- 239 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------------------- 239 (393)
. +||+|||++..+..
T Consensus 279 H-------------------------------------------iKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~ 315 (550)
T KOG0605|consen 279 H-------------------------------------------IKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKP 315 (550)
T ss_pred C-------------------------------------------EeeccccccchhhhhhhhhhhcchhhhhhhhccCCC
Confidence 4 88888887632210
Q ss_pred ---C-------------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC
Q psy12288 240 ---H-------------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291 (393)
Q Consensus 240 ---~-------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~ 291 (393)
. ....+|||.|+|||++.+.+|+..+|+||||||+|||+.|.+||.+.++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~- 394 (550)
T KOG0605|consen 316 SDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQ- 394 (550)
T ss_pred ccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 0 01127899999999999999999999999999999999999999988733
Q ss_pred CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhcccc
Q psy12288 292 YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHV 369 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~ 369 (393)
+....++...- . ..+| ...+.++.|||.+||+
T Consensus 395 -----~T~rkI~nwr~------------~----------------------------l~fP~~~~~s~eA~DLI~rll~- 428 (550)
T KOG0605|consen 395 -----ETYRKIVNWRE------------T----------------------------LKFPEEVDLSDEAKDLITRLLC- 428 (550)
T ss_pred -----HHHHHHHHHhh------------h----------------------------ccCCCcCcccHHHHHHHHHHhc-
Confidence 33333333211 1 1111 2345788999999999
Q ss_pred CCCCCcC---HHHHhcCCCCCCCC
Q psy12288 370 NQKLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 370 dP~~Rpt---~~ell~hp~~~~~~ 390 (393)
||++|.. ++||-.||||+++.
T Consensus 429 d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 429 DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred CHHHhcCcccHHHHhcCCccccCC
Confidence 9999995 89999999999873
|
|
| >KOG0583|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=354.70 Aligned_cols=253 Identities=27% Similarity=0.449 Sum_probs=215.6
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-----c-ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-----Q-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
....+|.+.+.||+|+||.|+.|++..++..||+|++... . ...+.+.+|+.+++.+. .||
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~-------------~Hp 80 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR-------------SHP 80 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc-------------cCC
Confidence 3456899999999999999999999999999999977653 1 23456678999999992 399
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
||+++.+++. ....+++||||+ +|+|++.+... +.+.+++++.+++|++.|++|||.+ ||+||||||+|||+
T Consensus 81 nI~~l~ev~~----t~~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENill 153 (370)
T KOG0583|consen 81 NIIRLLEVFA----TPTKIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILL 153 (370)
T ss_pred CEeEEEEEEe----cCCeEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEe
Confidence 9999999998 566699999999 78999999883 5599999999999999999999998 99999999999999
Q ss_pred eec-hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchh
Q psy12288 178 CVD-YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSV 253 (393)
Q Consensus 178 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aP 253 (393)
+.+ + .+||+|||++... .......+||+.|+||
T Consensus 154 d~~~~-------------------------------------------~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aP 190 (370)
T KOG0583|consen 154 DGNEG-------------------------------------------NLKLSDFGLSAISPGEDGLLKTFCGSPAYAAP 190 (370)
T ss_pred cCCCC-------------------------------------------CEEEeccccccccCCCCCcccCCCCCcccCCH
Confidence 887 5 4999999999866 3456678999999999
Q ss_pred HHHhcCC-C-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 254 EVLIGAG-Y-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 254 E~~~~~~-~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|++.+.. | +.++||||+||++|.|++|+.||.+.+.. ...
T Consensus 191 Evl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~------~l~-------------------------------- 232 (370)
T KOG0583|consen 191 EVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP------NLY-------------------------------- 232 (370)
T ss_pred HHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH------HHH--------------------------------
Confidence 9999987 8 68999999999999999999999864421 111
Q ss_pred eccCCCcchhHHHHhhhccCChhh-HHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAE-ASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+....+.++.-. +..+.+|+++||..||.+|+|+.++++||||+.
T Consensus 233 ----------~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 233 ----------RKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ----------HHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 12333344455555 889999999999999999999999999999996
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-46 Score=364.27 Aligned_cols=326 Identities=27% Similarity=0.460 Sum_probs=235.7
Q ss_pred CccccccCCee---CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 16 GYCPVQIGDLF---NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 16 ~~~~~~~~~~~---~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
+..++.+|+.+ .++|++.++||+|+||.||+|.+..+++.||||+++...........|+.+++.+.+.+..
T Consensus 114 ~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~----- 188 (467)
T PTZ00284 114 GHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPA----- 188 (467)
T ss_pred CceeEecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcc-----
Confidence 34445555544 4789999999999999999999999999999999975444445667899999998655432
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
.+.+++++.+.|. ....++++||++++++|.+.+... ..+++..+..++.||+.||+|||.++||+||||||
T Consensus 189 ---~~~~i~~i~~~~~---~~~~~~~iv~~~~g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP 260 (467)
T PTZ00284 189 ---DRFPLMKIQRYFQ---NETGHMCIVMPKYGPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKP 260 (467)
T ss_pred ---cCcceeeeEEEEE---cCCceEEEEEeccCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCH
Confidence 4566777777665 244679999999999999988765 34889999999999999999999744999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCch
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRS 252 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~a 252 (393)
+|||++.++..... .... ... .....+||+|||.+..........+||+.|+|
T Consensus 261 ~NILl~~~~~~~~~---------------------~~~~--~~~----~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~A 313 (467)
T PTZ00284 261 ENILMETSDTVVDP---------------------VTNR--ALP----PDPCRVRICDLGGCCDERHSRTAIVSTRHYRS 313 (467)
T ss_pred HHEEEecCCccccc---------------------cccc--ccC----CCCceEEECCCCccccCccccccccCCccccC
Confidence 99999765421000 0000 000 01125999999988765555556788999999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc--cccccCCCCCe
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK--TLRYFTPQGNF 330 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~ 330 (393)
||++.+..++.++|||||||++|||++|+.||...+ ..+++..+....|.+|..+...... ...+++..+..
T Consensus 314 PE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (467)
T PTZ00284 314 PEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD------NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQL 387 (467)
T ss_pred cHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccc
Confidence 999999999999999999999999999999997655 6678888889999999877653211 11122221111
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.... .+....................+.+||.+||++||.+|||++|+|+||||...
T Consensus 388 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 388 RPCT--DPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred cccC--CHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 1000 00000000000000001234678899999999999999999999999999873
|
|
| >KOG0595|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=338.81 Aligned_cols=258 Identities=27% Similarity=0.415 Sum_probs=211.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+|.+.++||+|+||+||+|+++.++..||||.+.+. ....+.+..|+.+|+.+ .|+||+.++
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel--------------~H~nIV~l~ 75 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL--------------KHPNIVRLL 75 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc--------------CCcceeeEE
Confidence 4799999999999999999999999999999987643 33456678999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++.. .++++|+||||| ||+|..++.... +++++.++.++.||+.||++||++ +|+||||||+|||++.+...
T Consensus 76 d~~~----~~~~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~ 148 (429)
T KOG0595|consen 76 DCIE----DDDFIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARN 148 (429)
T ss_pred EEEe----cCCeEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCC
Confidence 9998 778999999999 899999998763 599999999999999999999999 99999999999999765210
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
...+.+|++|||+|+.+... ..+.+|++.|||||++....|
T Consensus 149 -------------------------------------~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~Y 191 (429)
T KOG0595|consen 149 -------------------------------------DTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQY 191 (429)
T ss_pred -------------------------------------CCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccc
Confidence 00136999999999987543 456789999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||+|+++|+|++|+.||...+..+ .+..+.+-...+
T Consensus 192 dAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e------L~~~~~k~~~~~-------------------------------- 233 (429)
T KOG0595|consen 192 DAKADLWSIGTILYQCLTGKPPFDAETPKE------LLLYIKKGNEIV-------------------------------- 233 (429)
T ss_pred cchhhHHHHHHHHHHHHhCCCCccccCHHH------HHHHHhcccccc--------------------------------
Confidence 999999999999999999999998776332 111111110000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..++...++...+++...|..+|.+|.+..+-+.|+++..
T Consensus 234 -------~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 234 -------PVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred -------CchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 0122445556668888999999999999999999988754
|
|
| >KOG0658|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-47 Score=337.83 Aligned_cols=286 Identities=28% Similarity=0.454 Sum_probs=234.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.-.|.-.+++|.|+||.||.|....+++.||||..-.+. ..-.+|+.+|+.+ .|+||+++.-.
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~---r~knrEl~im~~l--------------~HpNIV~L~~~ 85 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK---RYKNRELQIMRKL--------------DHPNIVRLLYF 85 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC---CcCcHHHHHHHhc--------------CCcCeeeEEEE
Confidence 347999999999999999999999999999999876543 3446899999988 99999999999
Q ss_pred ceeecCC-CeEEEEEEeeccccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 107 FKIYSRN-GTHICMVFEVMGYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 107 ~~~~~~~-~~~~~iv~e~~~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
|...... ..+..+||||++.+|.+.+... ....++.-.++-++.||+.||+|||+. |||||||||.|+|+|.+.
T Consensus 86 f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~t-- 162 (364)
T KOG0658|consen 86 FSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDT-- 162 (364)
T ss_pred EEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCC--
Confidence 9876555 3477799999999999998742 234578888999999999999999997 999999999999998763
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCC-
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~- 260 (393)
+.+||||||+|+.+. .+......|..|+|||.+.++.
T Consensus 163 ----------------------------------------g~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~ 202 (364)
T KOG0658|consen 163 ----------------------------------------GVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 202 (364)
T ss_pred ----------------------------------------CeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccc
Confidence 269999999998764 3445667799999999999974
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.+.||||.||++.||+-|++.|++.+ ..+++..|.+++|.+..+......-.+..+.- ..+.... |.
T Consensus 203 Yt~~IDiWSaGCV~aELl~g~plFpG~s------~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~----p~ik~~~-~~ 271 (364)
T KOG0658|consen 203 YTTSIDIWSAGCVMAELLKGQPLFPGDS------SVDQLVEIIKVLGTPTREDIKSMNPNYTEFKF----PQIKAHP-WH 271 (364)
T ss_pred cCceeEEhhhhHHHHHHhcCCcccCCCC------HHHHHHHHHHHhCCCCHHHHhhcCcccccccC----ccccccc-ce
Confidence 8999999999999999999999999988 88999999999999988887765544321111 1111000 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
+ .+....+++.++|+.++|.++|.+|.++.|++.||||...+.
T Consensus 272 --~------~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 272 --K------VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred --e------ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 0 133456788899999999999999999999999999987653
|
|
| >KOG0033|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=329.53 Aligned_cols=261 Identities=26% Similarity=0.382 Sum_probs=218.9
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..|.+.|++.++||+|.|+.|+++.+..||+.+|+|++.. +....+.+.+|+++.+.+ .||||
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L--------------qHP~I 72 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL--------------QHPNI 72 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc--------------CCCcE
Confidence 3567899999999999999999999999999999998753 234567889999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+... +..+.++|+|.+ |+++...+..+. -+++..+-.+++||+.||.|+|.+ +|+|||+||+|+++..
T Consensus 73 vrL~~ti~----~~~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 73 VRLHDSIQ----EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLAS 145 (355)
T ss_pred eehhhhhc----ccceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeee
Confidence 99999997 778899999999 888887776552 378888999999999999999999 9999999999999965
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~ 257 (393)
... ...+||+|||++...+. .....+|||.|||||++.
T Consensus 146 K~~----------------------------------------~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 146 KAK----------------------------------------GAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLK 185 (355)
T ss_pred ccC----------------------------------------CCceeecccceEEEeCCccccccccCCCcccCHHHhh
Confidence 443 22499999999987652 345678999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..+|+..+|||+.||++|-|+.|++||.+.+ ..+..++|+.-.-.+|..
T Consensus 186 kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~------~~rlye~I~~g~yd~~~~------------------------- 234 (355)
T KOG0033|consen 186 KDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYEQIKAGAYDYPSP------------------------- 234 (355)
T ss_pred cCCCCCcchhhhhhHHHHHHHhCCCCCCCcc------HHHHHHHHhccccCCCCc-------------------------
Confidence 9999999999999999999999999998766 333444444322222221
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.++..++.+.+|+++||..||.+|+|+.|+|+|||+++.
T Consensus 235 -------------~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 235 -------------EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred -------------ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 125677889999999999999999999999999999875
|
|
| >KOG0588|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=356.23 Aligned_cols=250 Identities=28% Similarity=0.478 Sum_probs=221.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
-|++.+.||.|+.|.|-+|.+..||+.+|||++.+. ......+.+|+.+|+.+ .|+|++.++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi--------------~HpnVl~Ly 78 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI--------------EHPNVLRLY 78 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh--------------cCCCeeeee
Confidence 589999999999999999999999999999998643 34457788999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+++. +..++|+|.||+ +|.|++++.+. +++++.++.+++.||+.|+.|+|.. +||||||||+|+|++..+
T Consensus 79 dVwe----~~~~lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~-- 149 (786)
T KOG0588|consen 79 DVWE----NKQHLYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKN-- 149 (786)
T ss_pred eeec----cCceEEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhccc--
Confidence 9998 888999999999 99999999887 4599999999999999999999987 999999999999998877
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc--cCCCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+|++|||.|..- +.-..+.+|++.|.|||++.+.+|
T Consensus 150 -----------------------------------------nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pY 188 (786)
T KOG0588|consen 150 -----------------------------------------NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPY 188 (786)
T ss_pred -----------------------------------------CEeeeccceeecccCCccccccCCCcccCCchhhcCCCC
Confidence 3999999988643 334567899999999999999998
Q ss_pred -CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 -GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 -~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++||||+|||||.|++|+.||.+.+.. ..
T Consensus 189 dG~~sDVWSCGVILfALLtG~LPFdDdNir------~L------------------------------------------ 220 (786)
T KOG0588|consen 189 DGRPSDVWSCGVILFALLTGKLPFDDDNIR------VL------------------------------------------ 220 (786)
T ss_pred CCCccccchhHHHHHHHHhCCCCCCCccHH------HH------------------------------------------
Confidence 89999999999999999999999865511 11
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..++.++.++.|...+.++.+||++||..||++|+|.+||++|||+.+..
T Consensus 221 LlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 221 LLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred HHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 22445566777888999999999999999999999999999999998764
|
|
| >KOG0594|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=333.23 Aligned_cols=286 Identities=28% Similarity=0.463 Sum_probs=230.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccc-ceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK-VIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~-i~~~ 103 (393)
..|+.+++||+|+||.||+|+...+|+.||+|.+..+. .......+|+.+|+.+ .|+| ++++
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L--------------~~~~~iv~L 76 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL--------------SHANHIVRL 76 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh--------------CCCcceEEE
Confidence 46888899999999999999999999999999887543 3566779999999999 5666 8999
Q ss_pred cccceeecC--CCeEEEEEEeeccccHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 104 LNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDY--KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 104 ~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~--~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
.+++..... ....+++|||++..+|..++..... .+++...++.+|.||+.||+|||++ +|+||||||.||+++.
T Consensus 77 ~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 77 HDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISS 155 (323)
T ss_pred EeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECC
Confidence 988874321 2347899999999999999987653 3577789999999999999999998 9999999999999988
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .+||+|||+|+...-+ ..+.+.|.+|+|||++
T Consensus 156 ~G-------------------------------------------~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvL 192 (323)
T KOG0594|consen 156 SG-------------------------------------------VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVL 192 (323)
T ss_pred CC-------------------------------------------cEeeeccchHHHhcCCcccccccEEEeeccCHHHh
Confidence 76 4999999999866532 4567889999999999
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+. .|++..||||+|||+.||+++++.|++.+ +.+++..|.+++|......|......-++-.. ...
T Consensus 193 lGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s------e~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~------f~~ 260 (323)
T KOG0594|consen 193 LGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS------EIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAP------FPK 260 (323)
T ss_pred cCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHcCCCCccCCCCcccccccccc------CcC
Confidence 998 58999999999999999999999999988 68999999999999877666554432222110 000
Q ss_pred CC-cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LK-PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.. +....... ...+....+++.+||+++|.+|.||+.+|+||||....
T Consensus 261 ~~~~~~l~~~~-------~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 261 WPGPKDLSSIL-------PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred CCCccchHHhc-------cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 00 00000111 12225788999999999999999999999999998764
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=333.00 Aligned_cols=278 Identities=27% Similarity=0.436 Sum_probs=218.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||.|+||.||+|++..++..||+|.++... .....+.+|+.+++.+ .|+|++++++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~ 70 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL--------------KHANIVTLHD 70 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 47999999999999999999999999999999886432 2334667899999999 8999999998
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++|||++.+++.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~---- 140 (288)
T cd07871 71 IIH----TERCLTLVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKG---- 140 (288)
T ss_pred EEc----CCCeEEEEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCC----
Confidence 876 566799999999889988876543 3478899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhc-CCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIG-AGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~ 261 (393)
.+||+|||++..... ......+++.|+|||++.+ ..+
T Consensus 141 ---------------------------------------~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 181 (288)
T cd07871 141 ---------------------------------------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEY 181 (288)
T ss_pred ---------------------------------------CEEECcCcceeeccCCCccccCceecccccChHHhcCCccc
Confidence 499999999875432 2234567899999999876 457
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||+||++|+|++|++||.+.+ ..+.+..+....+..+.+.+........+.... .+....
T Consensus 182 ~~~~DiwslG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--- 247 (288)
T cd07871 182 STPIDMWGVGCILYEMATGRPMFPGST------VKEELHLIFRLLGTPTEETWPGITSNEEFRSYL-----FPQYRA--- 247 (288)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhccccchhhhccc-----cCccCC---
Confidence 999999999999999999999997655 566777888888887776665433222111100 000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..........+..+.+||++||+.||.+|||++|+++||||
T Consensus 248 ----~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 248 ----QPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ----CchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 00011112345678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=331.05 Aligned_cols=280 Identities=28% Similarity=0.499 Sum_probs=219.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++.+ .|+|++++.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 66 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL--------------KQENIVELK 66 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC--------------CCccccchh
Confidence 37999999999999999999999999999999987532 2345677899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++||||+.+++++.+.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~--- 137 (287)
T cd07848 67 EAFR----RRGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHND--- 137 (287)
T ss_pred hhEe----cCCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCC---
Confidence 8887 567899999999777777665543 4588999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||++.+..
T Consensus 138 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 177 (287)
T cd07848 138 ----------------------------------------VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP 177 (287)
T ss_pred ----------------------------------------cEEEeeccCcccccccccccccccccccccCCcHHHcCCC
Confidence 4999999998765322 22346789999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|++||.+.+ ..+.+..+....++.|............+... ..+......
T Consensus 178 ~~~~~DiwslGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 246 (287)
T cd07848 178 YGKAVDMWSVGCILGELSDGQPLFPGES------EIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL-----RFPAVNHPQ 246 (287)
T ss_pred CCCchhHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHhhhccchhccc-----ccCcccCcc
Confidence 9999999999999999999999998655 45566677778888887665432211111000 000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.....+....+..+.+||++||+.||++|||++|+++||||
T Consensus 247 -----~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 247 -----SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred -----cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00001123456789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0582|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=328.50 Aligned_cols=265 Identities=27% Similarity=0.402 Sum_probs=218.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.|++.++||.|..+.||+|+...+++.||||++..+. ...+.+++|+..+..+ .||||++.+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~--------------~HPNIv~~~ 90 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI--------------DHPNIVTYH 90 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc--------------CCCCcceEE
Confidence 357999999999999999999999999999999987432 3357789999999999 999999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+|. .+..+|+||++| +|++++.+...-..++++..+..|.+++++||.|||.+ |.+|||||+.|||++.|+
T Consensus 91 ~sFv----v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG-- 163 (516)
T KOG0582|consen 91 CSFV----VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDG-- 163 (516)
T ss_pred EEEE----ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCC--
Confidence 9998 677899999999 89999999887777799999999999999999999998 999999999999999998
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||.+..+..+ ....+||+.|||||++
T Consensus 164 -----------------------------------------~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 164 -----------------------------------------TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVL 202 (516)
T ss_pred -----------------------------------------cEEEcCceeeeeecccCceeeEeeccccCcccccChHHh
Confidence 4999999976554221 1455899999999996
Q ss_pred hc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 257 IG--AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 257 ~~--~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.. .+|+.++||||||++..||++|..||....+.. ..++++-+.+|...... ....
T Consensus 203 ~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--------vLl~tLqn~pp~~~t~~-~~~d------------- 260 (516)
T KOG0582|consen 203 MQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--------VLLLTLQNDPPTLLTSG-LDKD------------- 260 (516)
T ss_pred hhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--------HHHHHhcCCCCCccccc-CChH-------------
Confidence 54 369999999999999999999999997655321 12344555555322110 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
+ ....+..|..++..||..||.+||||+++|+|+||+..+.
T Consensus 261 ------------~----~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 261 ------------E----DKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred ------------H----hhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 0 0233458999999999999999999999999999998764
|
|
| >KOG0578|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-45 Score=343.13 Aligned_cols=252 Identities=28% Similarity=0.473 Sum_probs=213.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
...|+...+||+|+.|.||.|....+++.||||.+..... ..+-+.+|+.+|+.. .|+|++.+++
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~--------------~H~NiVnfl~ 337 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL--------------HHPNIVNFLD 337 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc--------------cchHHHHHHH
Confidence 3589999999999999999999999999999999875443 345578999999999 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.|. .++.+|+||||+ +|+|.+.+... .+++.++..|+++++.||+|||.+ ||+|||||.+|||+..++
T Consensus 338 Syl----v~deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g--- 406 (550)
T KOG0578|consen 338 SYL----VGDELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDG--- 406 (550)
T ss_pred Hhc----ccceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCC---
Confidence 998 557899999999 78877777553 389999999999999999999999 999999999999998888
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||++..+.. .....+||++|||||+.....|
T Consensus 407 ----------------------------------------~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~Y 446 (550)
T KOG0578|consen 407 ----------------------------------------SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPY 446 (550)
T ss_pred ----------------------------------------cEEEeeeeeeeccccccCccccccCCCCccchhhhhhccc
Confidence 499999999887643 4566799999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
++++||||||++.+||+-|++||--.+ ...++..|.. .|.
T Consensus 447 G~KVDIWSLGIMaIEMveGEPPYlnE~------PlrAlyLIa~-ng~--------------------------------- 486 (550)
T KOG0578|consen 447 GPKVDIWSLGIMAIEMVEGEPPYLNEN------PLRALYLIAT-NGT--------------------------------- 486 (550)
T ss_pred CccccchhhhhHHHHHhcCCCCccCCC------hHHHHHHHhh-cCC---------------------------------
Confidence 999999999999999999999996433 2222222221 121
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+.+..+...+..|.+|+.+||+.|+++|++|.|||+||||+.
T Consensus 487 -----P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 487 -----PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -----CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 122234667899999999999999999999999999999964
|
|
| >KOG0597|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=339.86 Aligned_cols=250 Identities=25% Similarity=0.456 Sum_probs=214.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+.. .....+.+|+++++.+ .|+||+.++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l--------------kHpniv~m~ 67 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL--------------KHPNIVEML 67 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc--------------CCcchhhHH
Confidence 47999999999999999999999999999999886432 3345688999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.|. +..++|+|+||+.|+|...+... +.++++.++.++.+++.||.|||++ +|+|||+||.|||++.++
T Consensus 68 esfE----t~~~~~vVte~a~g~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~--- 137 (808)
T KOG0597|consen 68 ESFE----TSAHLWVVTEYAVGDLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGG--- 137 (808)
T ss_pred Hhhc----ccceEEEEehhhhhhHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCC---
Confidence 9998 78899999999988999888665 4499999999999999999999998 999999999999998877
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+|+||||+++-.+... ....|||.|||||+..+.+|
T Consensus 138 ----------------------------------------~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~py 177 (808)
T KOG0597|consen 138 ----------------------------------------TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPY 177 (808)
T ss_pred ----------------------------------------ceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCc
Confidence 49999999998765432 23468999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+..+|+|||||++||+++|++||...+ +....+
T Consensus 178 d~~sDlWslGcilYE~~~G~PPF~a~s----------i~~Lv~------------------------------------- 210 (808)
T KOG0597|consen 178 DHTSDLWSLGCILYELYVGQPPFYARS----------ITQLVK------------------------------------- 210 (808)
T ss_pred cchhhHHHHHHHHHHHhcCCCCchHHH----------HHHHHH-------------------------------------
Confidence 999999999999999999999996433 111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+......++...+..|..|+..+|..||.+|+|+.+++.|||.++.
T Consensus 211 -~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 211 -SILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred -HHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 22223334556788999999999999999999999999999998763
|
|
| >KOG0694|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=342.47 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=215.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|.++++||+|+||.|++|..+.+++.+|||++++.... .+....|-+++.... .||.++.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-------------~HPFL~~ 433 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-------------RHPFLVN 433 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-------------cCCeEee
Confidence 46899999999999999999999999999999999976433 355677888888872 6999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++.+|+ ...+++.||||+ ||+ .-.+.. ...|++..++.++..|+.||.|||++ ||++||||.+|||+|.++
T Consensus 434 L~~~fQ----T~~~l~fvmey~~Ggd-m~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eG 505 (694)
T KOG0694|consen 434 LFSCFQ----TKEHLFFVMEYVAGGD-LMHHIH--TDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEG 505 (694)
T ss_pred cccccc----cCCeEEEEEEecCCCc-EEEEEe--cccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccC
Confidence 999999 888999999999 666 323322 24599999999999999999999999 999999999999999988
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~ 258 (393)
. +||+|||+++.. +....+.+||+.|+|||++.+
T Consensus 506 h-------------------------------------------~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e 542 (694)
T KOG0694|consen 506 H-------------------------------------------VKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTE 542 (694)
T ss_pred c-------------------------------------------EEecccccccccCCCCCccccccCChhhcChhhhcc
Confidence 4 999999999753 455677899999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..|+.++|.|||||++|||+.|+.||++.+ +.+....|.-
T Consensus 543 ~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd------Eee~FdsI~~---------------------------------- 582 (694)
T KOG0694|consen 543 QSYTRAVDWWGLGVLLYEMLVGESPFPGDD------EEEVFDSIVN---------------------------------- 582 (694)
T ss_pred CcccchhhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHhc----------------------------------
Confidence 999999999999999999999999999877 4445444432
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....+|...+.+++++|+++|+.||++|+. +.+|..||||+.+
T Consensus 583 --------d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 583 --------DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred --------CCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 223355667889999999999999999995 6899999999976
|
|
| >KOG0591|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-46 Score=318.76 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=211.0
Q ss_pred ccccccccCCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHH
Q psy12288 3 FDQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLK 79 (393)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~ 79 (393)
++.++..+.+.+.++.|+. +|++.++||+|.||.||++.+..+|..||.|.++. +....+....|+.+|+
T Consensus 1 M~~~~~~~~~~~~~~~~l~-------~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLk 73 (375)
T KOG0591|consen 1 MDKQSSAMMDFSPPQKTLA-------DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLK 73 (375)
T ss_pred CCcccccccCCCCCcccHH-------HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHH
Confidence 3566777777776555544 59999999999999999999999999999998763 3344577789999999
Q ss_pred HhcccCCCCcccccCcccccceeccc-cceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHH
Q psy12288 80 AVGRKSNVHSSAYNTQASEKVIRLLN-DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~ 155 (393)
.+ .||||++.++ .|. +++.-+.||||+| .|+|...+...+ ...+++..+++++.|++.|
T Consensus 74 QL--------------~HpNIVqYy~~~f~---~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~A 136 (375)
T KOG0591|consen 74 QL--------------NHPNIVQYYAHSFI---EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRA 136 (375)
T ss_pred hc--------------CCchHHHHHHHhhh---ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHH
Confidence 99 9999999998 554 2333488999999 889988886533 3458999999999999999
Q ss_pred HHHhhh--cCC--eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeec
Q psy12288 156 LNYLHT--QCR--IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231 (393)
Q Consensus 156 l~~lH~--~~~--i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~df 231 (393)
|..+|. . + |+||||||.||+++.++ .+||+||
T Consensus 137 L~~cH~~~~-r~~VmHRDIKPaNIFl~~~g-------------------------------------------vvKLGDf 172 (375)
T KOG0591|consen 137 LYHCHSKIP-RGTVMHRDIKPANIFLTANG-------------------------------------------VVKLGDF 172 (375)
T ss_pred HHHHhcccc-ccceeeccCcchheEEcCCC-------------------------------------------ceeeccc
Confidence 999998 3 4 99999999999998877 4999999
Q ss_pred CccccccCC---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCC
Q psy12288 232 GNACWIDDH---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGP 308 (393)
Q Consensus 232 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~ 308 (393)
|+++.+.+. ....+|||.||+||.+...+|++++||||+||++|||+.-.+||.+.+ ...+...+.-...
T Consensus 173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-------~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 173 GLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-------LLSLCKKIEQGDY 245 (375)
T ss_pred hhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-------HHHHHHHHHcCCC
Confidence 999987654 345789999999999999999999999999999999999999998764 1122222221111
Q ss_pred CChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCH
Q psy12288 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASA 377 (393)
Q Consensus 309 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~ 377 (393)
| ++| .-.|..+..+|.-|++.||+.||+.
T Consensus 246 -~---------------------------------------~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 246 -P---------------------------------------PLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred -C---------------------------------------CCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 0 123 4578899999999999999999985
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=339.35 Aligned_cols=303 Identities=29% Similarity=0.446 Sum_probs=225.5
Q ss_pred CccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCc
Q psy12288 16 GYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 16 ~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+++++.+|+ .+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------- 73 (355)
T cd07874 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------- 73 (355)
T ss_pred cceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh--------
Confidence 456788887 35789999999999999999999999999999999886432 2235567899999998
Q ss_pred ccccCcccccceeccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.|+|++++++.+..... .....++||||+++++...+.. .++...+..++.|++.||+|||++ |++|
T Consensus 74 ------~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~-givH 142 (355)
T cd07874 74 ------NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIH 142 (355)
T ss_pred ------CCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-Cccc
Confidence 88999999988763221 2346899999998888887754 278899999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~ 245 (393)
|||||+||+++.++ .++|+|||+++..... .....
T Consensus 143 rDikp~Nill~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~ 179 (355)
T cd07874 143 RDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMMTPYV 179 (355)
T ss_pred CCCChHHEEECCCC-------------------------------------------CEEEeeCcccccCCCccccCCcc
Confidence 99999999998776 4999999998765433 23457
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.. .......+....+....+...........+.
T Consensus 180 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (355)
T cd07874 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253 (355)
T ss_pred ccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhcHHHHHHH
Confidence 8999999999999889999999999999999999999997654 4555666666666555444433222111110
Q ss_pred -CCCCee--eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 326 -PQGNFR--RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 326 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...... ..+...+. .........+...+..+.+||.+||..||++|||+.|+++||||...
T Consensus 254 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 254 ENRPKYAGLTFPKLFPD---SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred hcCCccccccchhhccc---cccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 000000 00000000 00000011122345678899999999999999999999999999754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=328.42 Aligned_cols=285 Identities=26% Similarity=0.418 Sum_probs=215.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|++.... .......+|+.+++.+ .|+|++++.+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~ 70 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL--------------KHANIVLLHD 70 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC--------------CCCCcCeEEE
Confidence 68999999999999999999999999999999987432 2234567899999998 8899999998
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++||||+++++.+.+.... ..++.+.++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~---- 140 (303)
T cd07869 71 IIH----TKETLTLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTG---- 140 (303)
T ss_pred EEe----cCCeEEEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 887 567899999999999988886543 4588999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++..... ......+|+.|+|||++.+. .+
T Consensus 141 ---------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 181 (303)
T cd07869 141 ---------------------------------------ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEY 181 (303)
T ss_pred ---------------------------------------CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCC
Confidence 499999998865432 22345678999999998764 47
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||.+.. .....+..+....+......+...... ..+.+.. .....+...
T Consensus 182 ~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~ 251 (303)
T cd07869 182 STCLDMWGVGCIFVEMIQGVAAFPGMK-----DIQDQLERIFLVLGTPNEDTWPGVHSL-PHFKPER----FTLYSPKNL 251 (303)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCc-----cHHHHHHHHHHHhCCCChhhccchhhc-ccccccc----ccccCCccH
Confidence 889999999999999999999997643 144566666666665443332221111 0011100 000001111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...... ...+..+.+|+.+||+.||++|||+.|+++||||+++.
T Consensus 252 ~~~~~~-----~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 252 RQAWNK-----LSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred HHHhhc-----cCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 111110 11345778999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-44 Score=339.53 Aligned_cols=303 Identities=29% Similarity=0.441 Sum_probs=226.1
Q ss_pred CCccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCC
Q psy12288 15 GGYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 15 ~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
+.++++..++ .+.++|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------- 77 (359)
T cd07876 5 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV------- 77 (359)
T ss_pred CCcceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-------
Confidence 5567777777 5678999999999999999999999999999999998643 22345567899999988
Q ss_pred cccccCcccccceeccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
.|+|++++++.+..... ....+++||||+++++...+.. .++...+..++.|++.||+|||++ |++
T Consensus 78 -------~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~-~iv 145 (359)
T cd07876 78 -------NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA-GII 145 (359)
T ss_pred -------CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC-Ccc
Confidence 89999999988763221 2245899999998888877643 378899999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCC
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADE 244 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~ 244 (393)
||||||+||+++.++ .++|+|||++...... ....
T Consensus 146 HrDlkp~NIl~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~ 182 (359)
T cd07876 146 HRDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTACTNFMMTPY 182 (359)
T ss_pred cCCCCHHHEEECCCC-------------------------------------------CEEEecCCCccccccCccCCCC
Confidence 999999999998776 4999999998754322 3345
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
.+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ ..+....+....+..+.............+
T Consensus 183 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (359)
T cd07876 183 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD------HIDQWNKVIEQLGTPSAEFMNRLQPTVRNY 256 (359)
T ss_pred cccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 78999999999999889999999999999999999999998654 455666677777766655443322111110
Q ss_pred CCC---CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 325 TPQ---GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 325 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
... ..........+.. ............+..+.+||.+||..||++|||+.|+++||||..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 257 VENRPQYPGISFEELFPDW---IFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HhhCCCCCCcchhhhcccc---ccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 000 0000000000000 000000111234567889999999999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=343.87 Aligned_cols=287 Identities=22% Similarity=0.385 Sum_probs=220.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
....+|++.++||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.+ .|+|++++.
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l--------------~h~niv~l~ 125 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNL--------------NHINIIFLK 125 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhc--------------CCCCCccee
Confidence 34568999999999999999999999999999999876432 3456799999998 889999988
Q ss_pred ccceeec----CCCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 105 NDFKIYS----RNGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 105 ~~~~~~~----~~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
+.+.... ....++++||||+++++.+.+.. .....+++..++.++.||+.||+|||+. ||+||||||+|||++
T Consensus 126 ~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 126 DYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLID 204 (440)
T ss_pred eeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEc
Confidence 7764321 22346789999998888777653 2234588999999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVL 256 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~ 256 (393)
.++. .+||+|||+++.... ......+|+.|+|||++
T Consensus 205 ~~~~------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~ 242 (440)
T PTZ00036 205 PNTH------------------------------------------TLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELM 242 (440)
T ss_pred CCCC------------------------------------------ceeeeccccchhccCCCCcccCCCCcCccCHHHh
Confidence 5542 489999999976532 23345789999999998
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+. .++.++|||||||++|+|++|.+||.+.+ ..+++..+....|..+.+........+.. ...+.
T Consensus 243 ~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~~~p~~~~~~~~~~~~~~-------~~~~~ 309 (440)
T PTZ00036 243 LGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS------SVDQLVRIIQVLGTPTEDQLKEMNPNYAD-------IKFPD 309 (440)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhchhhhc-------ccCCc
Confidence 765 58999999999999999999999998766 56678888888887666554322111100 00011
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
........ .++...+..+.+||.+||..||.+|||+.|+++||||.+.+
T Consensus 310 ~~~~~l~~------~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 310 VKPKDLKK------VFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred cCchhHHH------HhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 11111111 12344567899999999999999999999999999998764
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=329.36 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=208.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~ 66 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV--------------SHPFIIRL 66 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC--------------CCCcHhhh
Confidence 47999999999999999999999999999999986432 2235577899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ++..+++||||+ +++|.+++... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~- 138 (291)
T cd05612 67 FWTEH----DQRFLYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEG- 138 (291)
T ss_pred Hhhhc----cCCeEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCC-
Confidence 88876 667899999999 78888888665 3488999999999999999999998 999999999999997766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...........||+.|+|||++.+..++
T Consensus 139 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 176 (291)
T cd05612 139 ------------------------------------------HIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHN 176 (291)
T ss_pred ------------------------------------------CEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCC
Confidence 49999999988765555556789999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|+.||...+ .......+.
T Consensus 177 ~~~DiwSlG~il~~l~~g~~pf~~~~------~~~~~~~i~--------------------------------------- 211 (291)
T cd05612 177 KAVDWWALGILIYEMLVGYPPFFDDN------PFGIYEKIL--------------------------------------- 211 (291)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH---------------------------------------
Confidence 99999999999999999999997544 111111111
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|++||..||.+||+ ++++++||||+..
T Consensus 212 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 212 ---AGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred ---hCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 1112233445678889999999999999995 9999999999864
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=333.04 Aligned_cols=284 Identities=28% Similarity=0.424 Sum_probs=217.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|+||.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL--------------RHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC--------------CCCCEeeecc
Confidence 6999999999999999999999999999999886421 2234567899999998 8999999988
Q ss_pred cceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
++..... ....+++||||++++|.+.+... ..+++..+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~--- 140 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADC--- 140 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC---
Confidence 7753322 22468999999999999888654 3489999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....+|+.|+|||++.+
T Consensus 141 ----------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 180 (338)
T cd07859 141 ----------------------------------------KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 180 (338)
T ss_pred ----------------------------------------cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhc
Confidence 4999999998754211 123468999999999876
Q ss_pred --CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc--cccCCCCCeeecc
Q psy12288 259 --AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL--RYFTPQGNFRRID 334 (393)
Q Consensus 259 --~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~ 334 (393)
..++.++|||||||++|+|++|++||.+.+ ...++..+....|..+........... .++. ...
T Consensus 181 ~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~ 248 (338)
T cd07859 181 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN------VVHQLDLITDLLGTPSPETISRVRNEKARRYLS------SMR 248 (338)
T ss_pred cccccCchhHHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH------hhc
Confidence 568999999999999999999999997655 455666777777776665544322110 0000 000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...+... ... + ...+..+.++|.+||..||++|||++|+++||||++...
T Consensus 249 ~~~~~~~----~~~--~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 249 KKQPVPF----SQK--F-PNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred ccCCCch----HHh--c-CCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000000 000 0 124567789999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=335.39 Aligned_cols=304 Identities=30% Similarity=0.459 Sum_probs=224.1
Q ss_pred CCccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCC
Q psy12288 15 GGYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 15 ~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
+...++..++ .+.++|++.+.||+|+||.||+|.+..+++.||||.+... ......+.+|+.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------- 80 (364)
T cd07875 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV------- 80 (364)
T ss_pred ccceeeecCcchhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-------
Confidence 3445555555 2467999999999999999999999999999999988643 22345567899999988
Q ss_pred cccccCcccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
.|+|++++++.+.... .....+++||||+++++...+.. .++...+..++.|++.||+|||++ |++
T Consensus 81 -------~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~-~iv 148 (364)
T cd07875 81 -------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GII 148 (364)
T ss_pred -------CCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC-Cee
Confidence 7899999888775322 13346899999998888887753 278889999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCC
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADE 244 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~ 244 (393)
||||||+||+++.++ .++|+|||+++..... ....
T Consensus 149 H~Dlkp~NIll~~~~-------------------------------------------~~kL~DfG~a~~~~~~~~~~~~ 185 (364)
T cd07875 149 HRDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMMTPY 185 (364)
T ss_pred cCCCCHHHEEECCCC-------------------------------------------cEEEEeCCCccccCCCCcccCC
Confidence 999999999998766 4999999999765433 2345
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
.+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.+ .......+....+..+.++..........+
T Consensus 186 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (364)
T cd07875 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD------HIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259 (364)
T ss_pred cccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhhHHHHHH
Confidence 78999999999999989999999999999999999999997655 455666666666665554443322211111
Q ss_pred CCCCC-ee--eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 325 TPQGN-FR--RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 325 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+.. .. ......+.. ............+..+.+||.+||..||.+|||+.|+|+||||...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 260 VENRPKYAGYSFEKLFPDV---LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HhhCCCcCCCChHhhCccc---cccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 00000 00 000000000 0000011112235678899999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0032|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=331.69 Aligned_cols=264 Identities=25% Similarity=0.442 Sum_probs=221.4
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
....+...|++.+.||+|.||.||+|.+..||+.+|+|++.+... ..+.+.+|+.+|+.+. .|
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~-------------~h 95 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS-------------GH 95 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc-------------CC
Confidence 556677899999999999999999999999999999999875433 2357899999999993 49
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+|++.+.+.|. ....+++|||++ ||.|++.+... .+++..+..++.|++.|+.|||+. |++||||||+|+|
T Consensus 96 pniv~l~~~~e----~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L 167 (382)
T KOG0032|consen 96 PNIVQLKDAFE----DPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLL 167 (382)
T ss_pred CCEEEEEEEEE----cCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHee
Confidence 99999999998 667899999999 89999999887 299999999999999999999997 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE 254 (393)
+...... .+.++++|||++..... .....+||+.|+|||
T Consensus 168 ~~~~~~~---------------------------------------~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APE 208 (382)
T KOG0032|consen 168 LASKDEG---------------------------------------SGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPE 208 (382)
T ss_pred eccccCC---------------------------------------CCcEEEeeCCCceEccCCceEeeecCCccccCch
Confidence 9655310 12599999999987655 345678999999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++...+|+..+||||+||++|.|++|.+||.+.+.. .....+....-.++
T Consensus 209 vl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~------~~~~~i~~~~~~f~------------------------ 258 (382)
T KOG0032|consen 209 VLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF------EIFLAILRGDFDFT------------------------ 258 (382)
T ss_pred hhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh------HHHHHHHcCCCCCC------------------------
Confidence 999999999999999999999999999999877632 22222211111111
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+.+...+..+.+||++||..||.+|+|+.++|+|||+++.
T Consensus 259 --------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 259 --------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred --------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 11235678899999999999999999999999999999875
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=334.53 Aligned_cols=251 Identities=20% Similarity=0.330 Sum_probs=208.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+|+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~ 82 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL--------------SHPFIVN 82 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC--------------CCCCCCc
Confidence 368999999999999999999999999999999987532 2235577899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .+...++||||+ +++|.+.+... ..++++.+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 83 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~ 155 (329)
T PTZ00263 83 MMCSFQ----DENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKG 155 (329)
T ss_pred EEEEEE----cCCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCC
Confidence 998887 667899999999 78888888764 3488999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...........||+.|+|||++.+..+
T Consensus 156 -------------------------------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 192 (329)
T PTZ00263 156 -------------------------------------------HVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGH 192 (329)
T ss_pred -------------------------------------------CEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCC
Confidence 4999999999876655556678999999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||.+.+. ......+.
T Consensus 193 ~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~-------------------------------------- 228 (329)
T PTZ00263 193 GKAVDWWTMGVLLYEFIAGYPPFFDDTP------FRIYEKIL-------------------------------------- 228 (329)
T ss_pred CCcceeechHHHHHHHHcCCCCCCCCCH------HHHHHHHh--------------------------------------
Confidence 9999999999999999999999965431 11111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||..||.+||+ ++++++||||++.
T Consensus 229 ----~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 229 ----AGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred ----cCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 1111223345567889999999999999997 7999999999874
|
|
| >KOG0198|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=323.59 Aligned_cols=257 Identities=25% Similarity=0.363 Sum_probs=206.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++...+.||+|+||.||++.+..+|+..|||.+..... ..+.+.+|+.+|..+ .|++||+.++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l--------------~~p~IV~~~G~ 82 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL--------------NHPNIVQYYGS 82 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC--------------CCCCEEeeCCc
Confidence 468889999999999999999999999999998775421 145689999999999 79999999997
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee-chhHH
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV-DYDKV 184 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~-~~~~~ 184 (393)
..... +..+.+.|||+ +|+|.+++.+... .+++..++.+..|+++||+|||++ |++|+||||+|||++. ++
T Consensus 83 ~~~~~--~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~--- 155 (313)
T KOG0198|consen 83 SSSRE--NDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNG--- 155 (313)
T ss_pred ccccc--CeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCC---
Confidence 54222 14789999999 8899999988764 699999999999999999999998 9999999999999987 45
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------CCCCCCCCCCCchhHHHhc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++..... ......||+.|||||++..
T Consensus 156 ----------------------------------------~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~ 195 (313)
T KOG0198|consen 156 ----------------------------------------DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRN 195 (313)
T ss_pred ----------------------------------------eEEeccCccccccccccccccccccccCCccccCchhhcC
Confidence 499999998886652 1335689999999999996
Q ss_pred CC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+. ..+++|||||||++.||+||+.||... ......+......
T Consensus 196 g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--------~~~~~~~~~ig~~----------------------------- 238 (313)
T KOG0198|consen 196 GEVARRESDIWSLGCTVVEMLTGKPPWSEF--------FEEAEALLLIGRE----------------------------- 238 (313)
T ss_pred CCcCCccchhhhcCCEEEeccCCCCcchhh--------cchHHHHHHHhcc-----------------------------
Confidence 32 235999999999999999999999642 0111111111100
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+++...+..+.+|+.+|+..||++||||+++|+|||.++..
T Consensus 239 --------~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 239 --------DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred --------CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 001134566788899999999999999999999999999997643
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-43 Score=322.40 Aligned_cols=282 Identities=26% Similarity=0.442 Sum_probs=214.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-CCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+.. ++..||+|.+..... ......+|+.+++.+... .|+|++++
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----------~hpniv~~ 69 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF-----------EHPNVVRL 69 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc-----------CCCCcceE
Confidence 479999999999999999999865 468899998864322 223456788887776321 68999999
Q ss_pred cccceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+.... .....+++|||++++++.+++.......+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~- 147 (290)
T cd07862 70 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSG- 147 (290)
T ss_pred EEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCC-
Confidence 98875332 234578999999998999988765555688999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||.+.+..
T Consensus 148 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 185 (290)
T cd07862 148 ------------------------------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 185 (290)
T ss_pred ------------------------------------------CEEEccccceEeccCCcccccccccccccChHHHhCCC
Confidence 4999999998755332 23446799999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc-ccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT-LRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|||||||++|+|++|.+||.+.+ ..+.+..+....+..+...+...... ...+. .....
T Consensus 186 ~~~~~DiwslG~il~el~~g~~~f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 250 (290)
T cd07862 186 YATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFH---------SKSAQ 250 (290)
T ss_pred CCCccchHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHHhCCCChhhchhhhcccchhcc---------CCCCC
Confidence 9999999999999999999999998765 55667777776665443322111110 00000 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... .+....+..+.+++.+||+.||++|||+.|+++||||
T Consensus 251 ~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 251 PIE-------KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred CHH-------HHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 000 0112356778899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=337.07 Aligned_cols=289 Identities=25% Similarity=0.360 Sum_probs=218.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|++.++||+|+||.||+|.+..+++.||+|... ...+.+|+.+++.+ .|+||+++++.
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l--------------~HpnIv~~~~~ 151 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAI--------------NHPSIIQLKGT 151 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhC--------------CCCCCCCEeEE
Confidence 358999999999999999999999999999999754 24567899999999 89999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
|. .+...++++|++++++...+... ..++..+++.++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 152 ~~----~~~~~~lv~e~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~----- 219 (391)
T PHA03212 152 FT----YNKFTCLILPRYKTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPG----- 219 (391)
T ss_pred EE----ECCeeEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCC-----
Confidence 87 56679999999998998888664 3488999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++..... ......||+.|+|||++.+..++
T Consensus 220 --------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 261 (391)
T PHA03212 220 --------------------------------------DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYG 261 (391)
T ss_pred --------------------------------------CEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCC
Confidence 499999999864321 22235789999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCC-CCCCcHHHHHHHHHHhCCCChHHHhcCccccc-cc-CCCCCeeeccCCCcc
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGK-EYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR-YF-TPQGNFRRIDNLKPW 339 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 339 (393)
.++|||||||++|+|++|..||...... .......++..+....|..|.+.......... .+ .........+...+
T Consensus 262 ~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 340 (391)
T PHA03212 262 PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRP- 340 (391)
T ss_pred cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCC-
Confidence 9999999999999999999887544322 12234567778888888766543211100000 00 00000000000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
.... ....+..+.+||.+||++||++|||++|+|+||||......|
T Consensus 341 -~~~~-------~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~ 386 (391)
T PHA03212 341 -LWTN-------LYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPY 386 (391)
T ss_pred -CHHH-------HhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCC
Confidence 0000 012456788999999999999999999999999999876544
|
|
| >KOG0585|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-44 Score=327.16 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=204.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---------------ccchhhHHHHHHHHHhcccCCCCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---------------VYADTARDEIVLLKAVGRKSNVHSSA 91 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~~ 91 (393)
-+.|++.+.||+|.||.|-+|++..+++.||||++.+.. ...++.++|+.+|+++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl---------- 165 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL---------- 165 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc----------
Confidence 458999999999999999999999999999999986421 1125789999999999
Q ss_pred ccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
.|+|||+++.+.. ++..+.+|||+||| .|.+.. ... ....+++.++++++++++.||+|||.+ ||+||||
T Consensus 166 ----~H~nVV~LiEvLD--DP~s~~~YlVley~s~G~v~w-~p~-d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDI 236 (576)
T KOG0585|consen 166 ----HHPNVVKLIEVLD--DPESDKLYLVLEYCSKGEVKW-CPP-DKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDI 236 (576)
T ss_pred ----CCcCeeEEEEeec--CcccCceEEEEEeccCCcccc-CCC-CcccccHHHHHHHHHHHHHHHHHHHhc-Ceecccc
Confidence 8999999999887 44677899999999 444332 211 112288999999999999999999999 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--------CCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--------HFA 242 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--------~~~ 242 (393)
||+|+|++.++ ++|++|||.+..... ...
T Consensus 237 KPsNLLl~~~g-------------------------------------------~VKIsDFGVs~~~~~~~~~~~d~~L~ 273 (576)
T KOG0585|consen 237 KPSNLLLSSDG-------------------------------------------TVKISDFGVSNEFPQGSDEGSDDQLS 273 (576)
T ss_pred chhheEEcCCC-------------------------------------------cEEeeccceeeecccCCccccHHHHh
Confidence 99999999887 599999998875421 123
Q ss_pred CCCCCCCCchhHHHhcCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 243 DEIQTRQYRSVEVLIGAG----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
..+|||.|+|||.+.+.. .+.+.||||+||++|+|+.|+.||.+.. ..+....|+
T Consensus 274 ~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~------~~~l~~KIv--------------- 332 (576)
T KOG0585|consen 274 RTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF------ELELFDKIV--------------- 332 (576)
T ss_pred hcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch------HHHHHHHHh---------------
Confidence 458999999999998832 3789999999999999999999997655 223333332
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCCh--hhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+.|+. +....+.|||.+||+.||++|++..++..|||...-
T Consensus 333 ---------------------------n~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 333 ---------------------------NDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ---------------------------cCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 22223332 357788999999999999999999999999998643
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=319.64 Aligned_cols=281 Identities=28% Similarity=0.461 Sum_probs=215.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|+||.||+|++..+++.||+|.++... .......+|+.+++.+... .|+|++++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----------~h~ni~~~~~ 69 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF-----------DHPNIVRLMD 69 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc-----------CCCCeeeeee
Confidence 5899999999999999999999999999999887432 1223456788888777321 6899999998
Q ss_pred cceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+.... ......+++||++.+++..++.......++++.++.++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~--- 145 (288)
T cd07863 70 VCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGG--- 145 (288)
T ss_pred eeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC---
Confidence 876432 235678999999988998888765555689999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...... .....+|..|+|||++.+..++
T Consensus 146 ----------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 185 (288)
T cd07863 146 ----------------------------------------QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYA 185 (288)
T ss_pred ----------------------------------------CEEECccCccccccCcccCCCccccccccCchHhhCCCCC
Confidence 4999999998765432 2345678999999999988899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc-ccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT-LRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|||||||++|+|++|.+||...+ ..+.+..+....+..+...+...... ...+.. .....
T Consensus 186 ~~~DiwslG~~l~~l~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~- 249 (288)
T cd07863 186 TPVDMWSVGCIFAEMFRRKPLFCGNS------EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSP---------RGPRP- 249 (288)
T ss_pred CcchhhhHHHHHHHHHhCCcCcCCCC------HHHHHHHHHHHhCCCChhhCcccccccccccCC---------CCCCc-
Confidence 99999999999999999999997654 55667777776665444332211110 000000 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...+....+..+.++|.+||+.||++|||+.|++.||||
T Consensus 250 ------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 250 ------VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ------hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 001112455678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=322.31 Aligned_cols=282 Identities=27% Similarity=0.445 Sum_probs=219.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|++..+++.||+|.++... .....+.+|+.+++.+ .|+|++++++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 71 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL--------------KHANIVTLHD 71 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC--------------CCCCcceEEE
Confidence 57999999999999999999999999999999887432 2234567899999998 7899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++||||+++++...+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 72 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~---- 141 (309)
T cd07872 72 IVH----TDKSLTLVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERG---- 141 (309)
T ss_pred EEe----eCCeEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 887 566799999999889988876543 3478899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....+|+.|+|||.+.+. .+
T Consensus 142 ---------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 182 (309)
T cd07872 142 ---------------------------------------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEY 182 (309)
T ss_pred ---------------------------------------CEEECccccceecCCCccccccccccccccCCHHHhCCCCC
Confidence 4999999998754322 2334678999999998764 57
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|+.||.+.+ ..+.+..+....+..+...+........+.+. .. +...+..
T Consensus 183 ~~~~DiwslG~il~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~- 250 (309)
T cd07872 183 STQIDMWGVGCIFFEMASGRPLFPGST------VEDELHLIFRLLGTPTEETWPGISSNDEFKNY--NF---PKYKPQP- 250 (309)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh--hc---CccCCCc-
Confidence 899999999999999999999997665 45667777888887766555432221111100 00 0000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
........+..+.++|++||..||.+|||+.|+++||||+...
T Consensus 251 ------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 251 ------LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred ------hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0001123466788999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-43 Score=329.46 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=211.2
Q ss_pred cccccCCeeCCeEEEEEEecccCceEEEEEEeCCCC-ceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 18 CPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
.|......-.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ...+.+.+|+.+++.+
T Consensus 20 ~~~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l----------- 88 (340)
T PTZ00426 20 EPKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI----------- 88 (340)
T ss_pred ccccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----------
Confidence 344455555678999999999999999999876654 689999886432 2234567899999998
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.|+|++++++.+. .+...++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++|||||
T Consensus 89 ---~hp~Iv~~~~~~~----~~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLk 158 (340)
T PTZ00426 89 ---NHPFCVNLYGSFK----DESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLK 158 (340)
T ss_pred ---CCCCCcceEEEEE----eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCC
Confidence 8999999999887 667899999999 78888888665 3488999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCc
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR 251 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~ 251 (393)
|+|||++.++ .++|+|||++...........||+.|+
T Consensus 159 p~NILl~~~~-------------------------------------------~ikL~DFG~a~~~~~~~~~~~gt~~y~ 195 (340)
T PTZ00426 159 PENLLLDKDG-------------------------------------------FIKMTDFGFAKVVDTRTYTLCGTPEYI 195 (340)
T ss_pred HHHEEECCCC-------------------------------------------CEEEecCCCCeecCCCcceecCChhhc
Confidence 9999998766 499999999887655555667899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++.+..++.++|+|||||++|+|++|..||...+ .......+..
T Consensus 196 aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~--------------------------- 242 (340)
T PTZ00426 196 APEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE------PLLIYQKILE--------------------------- 242 (340)
T ss_pred CHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC------HHHHHHHHhc---------------------------
Confidence 9999999889999999999999999999999997544 1111121111
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||..||++|+ +++++++||||++.
T Consensus 243 ---------------~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 243 ---------------GIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred ---------------CCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 11112234456778999999999999995 89999999999875
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=321.51 Aligned_cols=255 Identities=25% Similarity=0.340 Sum_probs=204.0
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
|++.+.||+|+||.||+|.+..+++.||+|.+..... ....+.+|+.+++.+ .|++++++.+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~iv~~~~ 67 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV--------------NSRFVVSLAY 67 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc--------------CCCcEEEEEE
Confidence 8889999999999999999999999999998864321 123456899999998 7889999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|...+.......+++..+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 68 ~~~----~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~--- 139 (285)
T cd05631 68 AYE----TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRG--- 139 (285)
T ss_pred EEc----cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCC---
Confidence 876 567899999999 67887776554434588999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++..... ......||..|+|||++.+..++
T Consensus 140 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~ 179 (285)
T cd05631 140 ----------------------------------------HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYT 179 (285)
T ss_pred ----------------------------------------CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCC
Confidence 499999999876532 22345689999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|+.||....... ....+....
T Consensus 180 ~~~DvwslGvil~el~~g~~pf~~~~~~~------~~~~~~~~~------------------------------------ 217 (285)
T cd05631 180 FSPDWWGLGCLIYEMIQGQSPFRKRKERV------KREEVDRRV------------------------------------ 217 (285)
T ss_pred cccCchhHHHHHHHHHhCCCCCCCCCcch------hHHHHHHHh------------------------------------
Confidence 99999999999999999999997544211 001111100
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~~ 390 (393)
......++...+..+.+||++||+.||.+||+ ++++++||||.+..
T Consensus 218 --~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 218 --KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred --hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 00111223455678899999999999999997 89999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0604|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=307.13 Aligned_cols=266 Identities=22% Similarity=0.311 Sum_probs=219.3
Q ss_pred eCCeEEEEE-EecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIR-KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.++|++.. +||-|-.|.|-.|.++.|++.+|+|++.. .++.++|+++.-..+ .|+|||.++
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D----s~KARrEVeLHw~~s-------------~h~~iV~Ii 121 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD----SPKARREVELHWMAS-------------GHPHIVSII 121 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc----CHHHHhHhhhhhhhc-------------CCCceEEee
Confidence 556888765 88999999999999999999999998874 467788888766653 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++|.........+.+|||.+ ||.|+..+..+....+++.++..|+.||..|+.|||+. +|.||||||+|+|....+.
T Consensus 122 dVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~- 199 (400)
T KOG0604|consen 122 DVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSP- 199 (400)
T ss_pred hhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCC-
Confidence 99997766777899999999 99999999998878899999999999999999999998 9999999999999976553
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
+..+||+|||+|+.-. ......+-|+.|.|||++....|
T Consensus 200 ---------------------------------------na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKy 240 (400)
T KOG0604|consen 200 ---------------------------------------NAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKY 240 (400)
T ss_pred ---------------------------------------CcceEecccccccccCCCccccCCcccccccCHHHhCchhc
Confidence 2259999999998654 33445677999999999998899
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
...+|+||+||++|-|++|++||.+........ .--.+|..---.+|.+-
T Consensus 241 dkscdmwSlgVimYIlLCGyPPFYS~hg~aisp--gMk~rI~~gqy~FP~pE---------------------------- 290 (400)
T KOG0604|consen 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKRRIRTGQYEFPEPE---------------------------- 290 (400)
T ss_pred CCCCCccchhHHHHHhhcCCCcccccCCccCCh--hHHhHhhccCccCCChh----------------------------
Confidence 999999999999999999999998776543211 11111111001122221
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
++.+|....|+|+++|..+|++|+|+.|+++|||++.-
T Consensus 291 ----------Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 291 ----------WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred ----------HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 15789999999999999999999999999999999763
|
|
| >KOG0599|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-44 Score=307.96 Aligned_cols=254 Identities=26% Similarity=0.456 Sum_probs=209.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---------ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
.+|.-.+.||.|..+.|-++.+..|+..+|+|++.... ...+.-.+|+.+|+++. +||
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-------------GHP 83 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-------------GHP 83 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-------------CCC
Confidence 47888899999999999999999999999999875321 11244467999999994 899
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+|+.+.+.+. .+.++++|++.| .|.|++++.+. -++++.+.++||+|++.|++|||.+ .||||||||+|||+
T Consensus 84 ~II~l~D~ye----s~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILl 156 (411)
T KOG0599|consen 84 YIIDLQDVYE----SDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILL 156 (411)
T ss_pred cEEEeeeecc----CcchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheee
Confidence 9999999998 788899999999 89999999765 3589999999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEV 255 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~ 255 (393)
+++. +++++|||+++.+. ......+|||.|.|||.
T Consensus 157 ddn~-------------------------------------------~i~isDFGFa~~l~~GekLrelCGTPgYLAPEt 193 (411)
T KOG0599|consen 157 DDNM-------------------------------------------NIKISDFGFACQLEPGEKLRELCGTPGYLAPET 193 (411)
T ss_pred cccc-------------------------------------------ceEEeccceeeccCCchhHHHhcCCCcccChhh
Confidence 9887 49999999998764 34556799999999999
Q ss_pred Hhc------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 256 LIG------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 256 ~~~------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
+.. .+|+..+|+|++||+||-|+.|.+||.... ....+..|+. |. +.+-+++
T Consensus 194 ikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk------QmlMLR~Ime--Gk------------yqF~spe-- 251 (411)
T KOG0599|consen 194 IKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK------QMLMLRMIME--GK------------YQFRSPE-- 251 (411)
T ss_pred eeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH------HHHHHHHHHh--cc------------cccCCcc--
Confidence 864 358999999999999999999999997432 2222222222 11 1111111
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+.+.+....+||++||..||.+|+|++|+|.||||..
T Consensus 252 ----------------------Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 252 ----------------------WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred ----------------------hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 2567788899999999999999999999999999943
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=318.20 Aligned_cols=285 Identities=26% Similarity=0.450 Sum_probs=219.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~nI~~~~~ 71 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL--------------KHANIVTLHD 71 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc--------------CCCCcceEEE
Confidence 57999999999999999999999999999999886432 2234567899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++||||+++++...+.... ..++...+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 72 ~~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~---- 141 (301)
T cd07873 72 IIH----TEKSLTLVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERG---- 141 (301)
T ss_pred EEe----cCCeEEEEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCC----
Confidence 887 567799999999889888876543 3588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....+++.|+|||.+.+. .+
T Consensus 142 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 182 (301)
T cd07873 142 ---------------------------------------ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDY 182 (301)
T ss_pred ---------------------------------------cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCC
Confidence 4999999988754322 2234568899999998764 47
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|++||...+ ....+..+....+..+...+........+... .......
T Consensus 183 ~~~~Dv~slG~~l~el~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--- 248 (301)
T cd07873 183 STQIDMWGVGCIFYEMSTGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSNEEFKSY-----NYPKYRA--- 248 (301)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCChhhchhhhcccccccc-----ccCcccc---
Confidence 889999999999999999999997654 44566666777666555444322111110000 0000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
.... ......+..+.+||.+||+.||.+|||++|+++||||.+..+.|
T Consensus 249 -~~~~---~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~ 296 (301)
T cd07873 249 -DCLH---NHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERI 296 (301)
T ss_pred -ccHH---hhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchh
Confidence 0000 11123456788999999999999999999999999999887654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=327.60 Aligned_cols=303 Identities=31% Similarity=0.470 Sum_probs=229.7
Q ss_pred CccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCc
Q psy12288 16 GYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 16 ~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+|+|+.+|+ .+.++|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------- 72 (353)
T cd07850 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-------- 72 (353)
T ss_pred CceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc--------
Confidence 689999999 5689999999999999999999999999999999988642 22234566899999998
Q ss_pred ccccCcccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.|+|++++++.+.... .+....++||||+++++.+.+... ++...+..++.|++.||++||++ |++|
T Consensus 73 ------~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~-gi~H 141 (353)
T cd07850 73 ------NHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA-GIIH 141 (353)
T ss_pred ------CCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC-Ceee
Confidence 7899999988775322 123468999999988988887543 78899999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~ 245 (393)
+||||+||+++.++ .++|+|||++....... ....
T Consensus 142 ~dlkp~Nil~~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~ 178 (353)
T cd07850 142 RDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMMTPYV 178 (353)
T ss_pred CCCCHHHEEECCCC-------------------------------------------CEEEccCccceeCCCCCCCCCCc
Confidence 99999999998766 49999999988654332 2345
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
++..|+|||.+.+..++.++|||||||++|+|++|+.||...+ .......+....|..+.++..........+.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (353)
T cd07850 179 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD------HIDQWNKIIEQLGTPSDEFMSRLQPTVRNYV 252 (353)
T ss_pred ccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhhhhhhHHh
Confidence 7889999999999999999999999999999999999997654 4556777777777777665544332222211
Q ss_pred CCCCeee---ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 326 PQGNFRR---IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 326 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....... .....+...+. ......+...+..+.++|.+||..||++|||+.|+|+||||+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 253 ENRPKYAGYSFEELFPDVLFP--PDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hcCCCCCCcchhhhCcccccC--cccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 1110000 00000000000 0000012245677889999999999999999999999999974
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=330.95 Aligned_cols=286 Identities=30% Similarity=0.459 Sum_probs=218.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF--------------KHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC--------------CCCCcCCHhh
Confidence 4788999999999999999999999999999886421 2235677899999998 8899999999
Q ss_pred cceeecCC-CeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRN-GTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~-~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+...... ....++||||+++++...+... ..++...++.++.||+.||+|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~--- 140 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNC--- 140 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCC---
Confidence 88632211 1278999999988888887654 3589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||.+.+..
T Consensus 141 ----------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 180 (372)
T cd07853 141 ----------------------------------------VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSR 180 (372)
T ss_pred ----------------------------------------CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCC
Confidence 4999999998754321 22346788999999998754
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|||||||++|+|++|+.||.+.+ ...++..+....|..+.+................ ....+
T Consensus 181 ~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 248 (372)
T cd07853 181 HYTSAVDIWSVGCIFAELLGRRILFQAQS------PIQQLDLITDLLGTPSLEAMRSACEGARAHILRG-----PHKPP- 248 (372)
T ss_pred CCCcHHHHHhHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhC-----CCCCC-
Confidence 7899999999999999999999998765 5667888888888766654432211100000000 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.......+....+..+.+||.+||..||.+|||+.|+++||||++.+
T Consensus 249 ----~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 249 ----SLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred ----chHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 01111123344567889999999999999999999999999998854
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0662|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=282.90 Aligned_cols=280 Identities=29% Similarity=0.458 Sum_probs=231.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|+-.++||+|+||.||+|+++.+++.||+|.+..+ ........+|+-+|+.+ .|.||+++++
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel--------------khknivrl~d 68 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL--------------KHKNIVRLHD 68 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh--------------hhcceeehhh
Confidence 577789999999999999999999999999998743 34456778999999999 8899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
... ++..+.+|+|+|..+|..++.+.+ +.+..+.++.+|.|++.||.|+|++ ++.|||+||.|.+++.++.
T Consensus 69 vlh----sdkkltlvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~nge--- 139 (292)
T KOG0662|consen 69 VLH----SDKKLTLVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGE--- 139 (292)
T ss_pred hhc----cCceeEEeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCc---
Confidence 987 677899999999999999998765 4589999999999999999999998 9999999999999998884
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCC-C
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAG-Y 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~-~ 261 (393)
+||.|||+++-++.+. +..+-|.+|++|.++.+.. |
T Consensus 140 ----------------------------------------lkladfglarafgipvrcysaevvtlwyrppdvlfgakly 179 (292)
T KOG0662|consen 140 ----------------------------------------LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179 (292)
T ss_pred ----------------------------------------EEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehh
Confidence 9999999999887664 3456799999999999986 7
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+++.|+||.||++.|+.. |.+.|++.. -.+++.+|.+++|....+.|....+..++- ..+......
T Consensus 180 ~tsidmwsagcifaelanagrplfpg~d------vddqlkrif~~lg~p~ed~wps~t~lpdyk-------~yp~ypatt 246 (292)
T KOG0662|consen 180 STSIDMWSAGCIFAELANAGRPLFPGND------VDDQLKRIFRLLGTPTEDQWPSMTKLPDYK-------PYPIYPATT 246 (292)
T ss_pred ccchHhhhcchHHHHHhhcCCCCCCCCc------HHHHHHHHHHHhCCCccccCCccccCCCCc-------ccCCccccc
Confidence 999999999999999988 888898877 789999999999988776665544332221 111111111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+. ...+..-.|++.++|.-+|..|++++.+++||||.+..
T Consensus 247 swsqiv------p~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 247 SWSQIV------PKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred hHHHHh------hhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 111111 22334567999999999999999999999999999865
|
|
| >KOG4717|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=321.27 Aligned_cols=257 Identities=24% Similarity=0.437 Sum_probs=224.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
-|+.-|++.+.||+|.|++|-+|++..||+.||||++.++ ......+.+|+++|+.+ .||||+
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV--------------QHpNiV 80 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV--------------QHPNIV 80 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh--------------cCcCee
Confidence 3556799999999999999999999999999999998754 34456788999999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++.+.. ....+|+|+|+- +|+|++++.+.. .+++++.+.+++.||+.|+.|+|+- .+|||||||+|+.+...
T Consensus 81 RLYEViD----TQTKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 81 RLYEVID----TQTKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEK 154 (864)
T ss_pred eeeehhc----ccceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeee
Confidence 9999887 667899999999 789999998876 4599999999999999999999986 99999999999988654
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc--cCCCCCCCCCCCCchhHHHhc
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~--~~~~~~~~~t~~y~aPE~~~~ 258 (393)
.. -+||+|||++..+ +......+|++.|.|||++.+
T Consensus 155 lG------------------------------------------lVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLG 192 (864)
T KOG4717|consen 155 LG------------------------------------------LVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLG 192 (864)
T ss_pred cC------------------------------------------ceEeeeccccccCCCcchhhcccchhhccCchhhhc
Confidence 32 4999999998765 455677899999999999999
Q ss_pred CCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
-.| .+++||||||||+|.|++|++||..++ +.+.+.+|+++--.
T Consensus 193 DsYDAPAVDiWSLGVILyMLVCGq~PFqeAN------DSETLTmImDCKYt----------------------------- 237 (864)
T KOG4717|consen 193 DSYDAPAVDIWSLGVILYMLVCGQPPFQEAN------DSETLTMIMDCKYT----------------------------- 237 (864)
T ss_pred CccCCcchhhhHHHHHHHHHHhCCCcccccc------chhhhhhhhccccc-----------------------------
Confidence 988 689999999999999999999999888 55666666665444
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.|+.++.+..+||..||..||.+|.+.++|..|+|+..+..
T Consensus 238 -------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 238 -------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred -------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 45567788999999999999999999999999999998753
|
|
| >KOG0610|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=314.69 Aligned_cols=287 Identities=23% Similarity=0.316 Sum_probs=216.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-+.|++++.||.|.-|.||+|+...++..+|+|++.+... ...+.+.|-++|..+ +||.++.
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l--------------DHPFlPT 141 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL--------------DHPFLPT 141 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc--------------CCCccch
Confidence 3689999999999999999999999999999999976532 235567788999999 9999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++..|. ...+.|++|||| ||+|..+..++....++++.++.++.+++.||+|||.. |||+|||||+|||+.+|+
T Consensus 142 LYa~fe----t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredG 216 (459)
T KOG0610|consen 142 LYASFE----TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDG 216 (459)
T ss_pred hhheee----ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCC
Confidence 999998 888999999999 99999999999888999999999999999999999987 999999999999998887
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCC--CCcccccceEEE----------------eecCcc--------c
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLD--PANEVYDISVKI----------------ADLGNA--------C 235 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~kl----------------~dfg~~--------~ 235 (393)
. .-...+..+..++..++....+... .....+.. +.. .|.+.. .
T Consensus 217 H---------IMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~-~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~ae 286 (459)
T KOG0610|consen 217 H---------IMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRS-RQPSCFSPRCLSSSKKRKKKDESASRSLPELVAE 286 (459)
T ss_pred c---------EEeeeccccccCCCCCeeeccCCCCCCCCCccccc-ccccccccchhccccccccccccccccchhhhcC
Confidence 5 1112222222222212211111000 00000000 000 122211 0
Q ss_pred cccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHh
Q psy12288 236 WIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315 (393)
Q Consensus 236 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 315 (393)
..+......+||-.|.|||++.+.+.+.++|+|+||+++|||+.|.-||.+.+..+ .+..+
T Consensus 287 p~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~------Tl~NI------------- 347 (459)
T KOG0610|consen 287 PTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE------TLRNI------------- 347 (459)
T ss_pred CCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh------hHHHH-------------
Confidence 01111234589999999999999999999999999999999999999999887433 33322
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCcC----HHHHhcCCCCCCC
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRAS----AADCLRHPWLNPR 389 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~ 389 (393)
+.+...|+ ...+..+.|||+++|..||++|+. |.||-+||||+++
T Consensus 348 -----------------------------v~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 348 -----------------------------VGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred -----------------------------hcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 22222222 256788999999999999999998 9999999999987
Q ss_pred C
Q psy12288 390 R 390 (393)
Q Consensus 390 ~ 390 (393)
.
T Consensus 399 n 399 (459)
T KOG0610|consen 399 N 399 (459)
T ss_pred C
Confidence 3
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=325.35 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=198.5
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.+ .|++++++.+.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~hp~i~~~~~~~~- 65 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT--------------RHPFLTALKYSFQ- 65 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC--------------CCCCCCCEEEEEE-
Confidence 36899999999999999999999999987532 2234556788889888 7899999988887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 66 ---~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~------- 132 (323)
T cd05571 66 ---THDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDG------- 132 (323)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCC-------
Confidence 667899999999 77887777654 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 133 ------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 176 (323)
T cd05571 133 ------------------------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176 (323)
T ss_pred ------------------------------------CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccc
Confidence 49999999987532 223345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|..||...+. ......+ .
T Consensus 177 DiwSlG~il~elltg~~Pf~~~~~------~~~~~~~------------------------------------------~ 208 (323)
T cd05571 177 DWWGLGVVMYEMMCGRLPFYNQDH------EKLFELI------------------------------------------L 208 (323)
T ss_pred cCcccchhhhhhhcCCCCCCCCCH------HHHHHHH------------------------------------------H
Confidence 999999999999999999965431 1111111 0
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||..||++|| ++.++++||||.+.
T Consensus 209 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 209 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred cCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 111123345567889999999999999999 89999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0670|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=323.09 Aligned_cols=312 Identities=31% Similarity=0.540 Sum_probs=259.5
Q ss_pred CccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
||+-+++|+++..+|.|....|+|=|+.|-+|.+...+..||||++.++......-..|+++|+.|.....-
T Consensus 420 GYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~E-------- 491 (752)
T KOG0670|consen 420 GYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPE-------- 491 (752)
T ss_pred ceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCch--------
Confidence 788889999999999999999999999999999999999999999998887778889999999999766543
Q ss_pred ccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
...|+++++..|. ..+++|+|||-+.-+|.+++.... .-++....++.++.|++.||..|-. |||+|.||||+|
T Consensus 492 dk~Hclrl~r~F~----hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDN 566 (752)
T KOG0670|consen 492 DKFHCLRLFRHFK----HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDN 566 (752)
T ss_pred hhhHHHHHHHHhh----hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccc
Confidence 4567888888887 788999999999999999987643 3358889999999999999999985 699999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-CCCCCCCCCchh
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-ADEIQTRQYRSV 253 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~t~~y~aP 253 (393)
|||+...+ .+||||||.|...+.+. .++.-+..|+||
T Consensus 567 iLVNE~k~------------------------------------------iLKLCDfGSA~~~~eneitPYLVSRFYRaP 604 (752)
T KOG0670|consen 567 ILVNESKN------------------------------------------ILKLCDFGSASFASENEITPYLVSRFYRAP 604 (752)
T ss_pred eEeccCcc------------------------------------------eeeeccCccccccccccccHHHHHHhccCc
Confidence 99976543 69999999998765543 344446779999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+.+|....|+||+||++|||+||+..|++.+ ....+...+++-|++|..++..+....+-|+.+=++-.+
T Consensus 605 EIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~T------NN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~ 678 (752)
T KOG0670|consen 605 EIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRT------NNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYI 678 (752)
T ss_pred ceeecCcccCCccceeeceeeEEeeccceecCCCC------cHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEE
Confidence 99999999999999999999999999999999988 777888999999999999999988777777776555332
Q ss_pred cC--------------CCc-chhHHHHhhhccCChh---hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 334 DN--------------LKP-WGLYQVLTEKYHWSKA---EASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 334 ~~--------------~~~-~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.. .++ .-+...+.....++.+ .-.+|.+|+.+||.+||++|.|+.|+|.||||..
T Consensus 679 e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 679 EVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred eccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 22 222 1111222221123333 3478889999999999999999999999999964
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=325.07 Aligned_cols=258 Identities=22% Similarity=0.331 Sum_probs=207.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+|++.++||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~iv~~ 66 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT--------------KSEWLVKL 66 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC--------------CCCCCccE
Confidence 36999999999999999999999999999999987542 2234567788888888 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.+.++||||+ +++|.+.+... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~- 138 (333)
T cd05600 67 LYAFQ----DDEYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASG- 138 (333)
T ss_pred EEEEE----cCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCC-
Confidence 98887 677899999999 78888888654 3488999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...........||+.|+|||++.+..++
T Consensus 139 ------------------------------------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 176 (333)
T cd05600 139 ------------------------------------------HIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYD 176 (333)
T ss_pred ------------------------------------------CEEEEeCcCCcccccccCCcccCccccChhHhcCCCCC
Confidence 49999999988765555566789999999999998999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|..||...+ ..+....+........ .+..
T Consensus 177 ~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~--------------~~~~-------------- 222 (333)
T cd05600 177 FTVDYWSLGCMLYEFLCGFPPFSGST------PNETWENLKYWKETLQ--------------RPVY-------------- 222 (333)
T ss_pred CccceecchHHHhhhhhCCCCCCCCC------HHHHHHHHHhcccccc--------------CCCC--------------
Confidence 99999999999999999999997544 2222222211100000 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.......+..+.++|.+||..+|.+||+++++++||||++.
T Consensus 223 ------~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 223 ------DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred ------CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 00001345678899999999999999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-42 Score=323.67 Aligned_cols=286 Identities=29% Similarity=0.461 Sum_probs=219.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~ 78 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM--------------KHENVIG 78 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc--------------CCCchhh
Confidence 4568999999999999999999999999999999886432 2234567899999998 7899999
Q ss_pred ccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.... ......+++++++++++...+.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~ 154 (343)
T cd07878 79 LLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNED 154 (343)
T ss_pred hhhhhcccccccccCcEEEEeecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCC
Confidence 998875322 12345799999999998877654 3489999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .++|+|||++...........+|+.|+|||++.+ .
T Consensus 155 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 191 (343)
T cd07878 155 C-------------------------------------------ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWM 191 (343)
T ss_pred C-------------------------------------------CEEEcCCccceecCCCcCCccccccccCchHhcCCc
Confidence 6 4999999999877666666678999999999987 4
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc-cccCCCCCeeeccCCCc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL-RYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|||||||++|+|++|+.||...+ ....+..+....+..+........... +.+. ...+....
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 260 (343)
T cd07878 192 HYNQTVDIWSVGCIMAELLKGKALFPGND------YIDQLKRIMEVVGTPSPEVLKKISSEHARKYI-----QSLPHMPQ 260 (343)
T ss_pred cCCchhhhHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhcchhhHHHHh-----hccccccc
Confidence 57899999999999999999999997654 456667777777766655543221110 0000 00000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. .+.. .....+..+.+||.+||..||.+|||+.|+++||||....
T Consensus 261 ~----~~~~---~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 261 Q----DLKK---IFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred h----hHHH---hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 0 0000 0112345678999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-42 Score=327.17 Aligned_cols=251 Identities=18% Similarity=0.347 Sum_probs=199.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~--------------~~~~iv~~ 66 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA--------------DSLWVVKM 66 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC--------------CCCCcceE
Confidence 47999999999999999999999999999999987532 2234567888888888 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ....+++||||+ +++|.+.+... ..+++..++.++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~- 138 (363)
T cd05628 67 FYSFQ----DKLNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKG- 138 (363)
T ss_pred EEEEe----cCCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCC-
Confidence 98887 667899999999 78888888664 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (363)
T cd05628 139 ------------------------------------------HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM 176 (363)
T ss_pred ------------------------------------------CEEEeeccCccccccccccccccccccccccccccccc
Confidence 4999999988643211
Q ss_pred ----------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH
Q psy12288 241 ----------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304 (393)
Q Consensus 241 ----------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 304 (393)
....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ .......+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~ 250 (363)
T cd05628 177 NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET------PQETYKKVMN 250 (363)
T ss_pred ccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHc
Confidence 113468999999999999999999999999999999999999997654 2222222221
Q ss_pred HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCC---CcCHHH
Q psy12288 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKL---RASAAD 379 (393)
Q Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~---Rpt~~e 379 (393)
....+ .++ ...+..+.++|.+|++ +|.+ ||+++|
T Consensus 251 ~~~~~----------------------------------------~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~e 289 (363)
T cd05628 251 WKETL----------------------------------------IFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEE 289 (363)
T ss_pred CcCcc----------------------------------------cCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 10100 011 1245677899998776 4554 589999
Q ss_pred HhcCCCCCCC
Q psy12288 380 CLRHPWLNPR 389 (393)
Q Consensus 380 ll~hp~~~~~ 389 (393)
+++||||+++
T Consensus 290 i~~hp~f~~~ 299 (363)
T cd05628 290 IKTNPFFEGV 299 (363)
T ss_pred HhCCCCCCCC
Confidence 9999999876
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=319.42 Aligned_cols=291 Identities=23% Similarity=0.322 Sum_probs=209.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.++|++.+.||+|+||.||+|.+..++..+|+|++.... .....+.+|+.+++.+ .|+|+++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 69 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC--------------NSPYIVGFY 69 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC--------------CCCCCCeEE
Confidence 478999999999999999999999999999999887532 2345688999999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .++..++||||+ +++|.+++.... .+++..+..++.|++.||+|||+..+++||||||+||+++.++
T Consensus 70 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~-- 141 (331)
T cd06649 70 GAFY----SDGEISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG-- 141 (331)
T ss_pred EEEE----ECCEEEEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--
Confidence 9887 566799999999 678888876643 4889999999999999999999864699999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...... .....+|..|+|||++.+..++
T Consensus 142 -----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~ 180 (331)
T cd06649 142 -----------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 180 (331)
T ss_pred -----------------------------------------cEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCC
Confidence 4999999998755332 3345689999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc-ccccccCCCCC--eeeccCCCcc
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK-KTLRYFTPQGN--FRRIDNLKPW 339 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 339 (393)
.++|||||||++|+|++|+.||...... . +....+........... .......+... ........+.
T Consensus 181 ~~~DiwslG~il~el~tg~~p~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
T cd06649 181 VQSDIWSMGLSLVELAIGRYPIPPPDAK-------E---LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPA 250 (331)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCCHH-------H---HHHHhcccccccccCCccccCcccccccccccccccccccc
Confidence 9999999999999999999999654311 1 11122211000000000 00000000000 0000000000
Q ss_pred -hhHHHHh----hh-ccC-ChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 -GLYQVLT----EK-YHW-SKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 -~~~~~~~----~~-~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....... +. ... ....+..+.+||.+||..||++|||++|+++||||+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 251 MAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred hhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0011111 00 011 123567899999999999999999999999999998653
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0666|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=307.56 Aligned_cols=300 Identities=30% Similarity=0.437 Sum_probs=230.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..|+++.+||+|+||.||+|....++. .+|||.++.+ +......-+|+.+++.+ .|+|+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl--------------~h~nv 89 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL--------------KHPNV 89 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh--------------cCCcc
Confidence 479999999999999999997666533 6899988754 34567778999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARS---DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~---~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+.+..+|.. .+..++++++|...+|+..+... ....++...++.|+.||+.|+.|||++ -|+||||||.|||+
T Consensus 90 i~Lv~Vfl~---~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlv 165 (438)
T KOG0666|consen 90 ISLVKVFLS---HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILV 165 (438)
T ss_pred hhHHHHHhc---cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEE
Confidence 999998873 26789999999999999988532 123478889999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCC------CCCCCCCc
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD------EIQTRQYR 251 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~------~~~t~~y~ 251 (393)
..|+. .++++|++|+|+++.+..+..+ .+-|.+|+
T Consensus 166 mgdgp---------------------------------------erG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR 206 (438)
T KOG0666|consen 166 MGDGP---------------------------------------ERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR 206 (438)
T ss_pred eccCC---------------------------------------ccCeeEeecccHHHHhhccccccccCCceEEEEEec
Confidence 88863 1457999999999987655333 24588999
Q ss_pred hhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCC---CCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 252 SVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEY---SRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 252 aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
|||++.++. ||.+.|+|+.|||+.||++-++.|.+...+.. .-..+++.+|+.++|......|...++.-.+.+.-
T Consensus 207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l 286 (438)
T KOG0666|consen 207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL 286 (438)
T ss_pred ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence 999999986 79999999999999999999999976543221 22578999999999998776666554433221111
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..++... ..+ ..+...+......++..++|+.+||+.||-+|+|++|+++|+||...
T Consensus 287 s~f~~~~-~~n----~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d 343 (438)
T KOG0666|consen 287 SDFRRHY-YDN----VSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED 343 (438)
T ss_pred HHhHHhh-cCc----chHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence 1110000 000 00111122222334558899999999999999999999999999875
|
|
| >KOG0580|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=295.14 Aligned_cols=257 Identities=25% Similarity=0.394 Sum_probs=220.3
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
++--++|++.+.||+|.||.||+|+...++..||+|++.++. .....+++|+++...+ .|||
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L--------------~hpn 83 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL--------------RHPN 83 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc--------------CCcc
Confidence 344578999999999999999999999999999999987643 2235566777776666 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|+++++.|. +...+|+++||. +|.++..+..+....+++.....++.|++.|+.|+|.. +++||||||+|+|++
T Consensus 84 ilrlY~~fh----d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg 158 (281)
T KOG0580|consen 84 ILRLYGYFH----DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLG 158 (281)
T ss_pred HHhhhhhee----ccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccC
Confidence 999999998 777899999999 89999999977777799999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-CCCCCCCCCCCCchhHHHh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-DHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~t~~y~aPE~~~ 257 (393)
.++. +|++|||.+.... ......+||..|.+||...
T Consensus 159 ~~~~-------------------------------------------lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~ 195 (281)
T KOG0580|consen 159 SAGE-------------------------------------------LKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVE 195 (281)
T ss_pred CCCC-------------------------------------------eeccCCCceeecCCCCceeeecccccCCHhhcC
Confidence 7773 9999999887543 3345678999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++..+|+|++|++-||++.|.+||.+.+ ..+..++|.++.-
T Consensus 196 ~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~------~~etYkrI~k~~~------------------------------ 239 (281)
T KOG0580|consen 196 GRGHDKFVDLWSLGVLCYEFLVGLPPFESQS------HSETYKRIRKVDL------------------------------ 239 (281)
T ss_pred CCCccchhhHHHHHHHHHHHHhcCCchhhhh------hHHHHHHHHHccc------------------------------
Confidence 9999999999999999999999999998766 4444555544333
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.++...+..+.|+|.+||..+|.+|.+..|+++|||+...+
T Consensus 240 ------------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~~ 280 (281)
T KOG0580|consen 240 ------------KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVANG 280 (281)
T ss_pred ------------cCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhcC
Confidence 34456677889999999999999999999999999998654
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=329.28 Aligned_cols=253 Identities=19% Similarity=0.354 Sum_probs=202.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|++..+++.||||++.... .....+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~h~~iv~~ 66 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA--------------DNPWVVKL 66 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCcce
Confidence 47999999999999999999999999999999987532 2234567899999998 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.++++||||+ +++|.+.+... ..+++..++.++.|++.||+|||++ |++||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~- 138 (364)
T cd05599 67 YYSFQ----DENYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKG- 138 (364)
T ss_pred EEEEE----cCCeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCC-
Confidence 98887 677899999999 77888887664 3489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (364)
T cd05599 139 ------------------------------------------HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFIS 176 (364)
T ss_pred ------------------------------------------CEEEeecccceecccccccccccccccccccccccccc
Confidence 4999999987643211
Q ss_pred -------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHH
Q psy12288 241 -------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAH 301 (393)
Q Consensus 241 -------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 301 (393)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+. ......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~------~~~~~~ 250 (364)
T cd05599 177 KPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP------QETYRK 250 (364)
T ss_pred ccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCH------HHHHHH
Confidence 0123589999999999998899999999999999999999999975541 112111
Q ss_pred HHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC---HH
Q psy12288 302 IVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS---AA 378 (393)
Q Consensus 302 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~ 378 (393)
+....... . .+-....+..+.++|++||. +|.+|++ ++
T Consensus 251 i~~~~~~~------------~--------------------------~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~ 291 (364)
T cd05599 251 IINWKETL------------Q--------------------------FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN 291 (364)
T ss_pred HHcCCCcc------------C--------------------------CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence 11100000 0 00001235678899999997 9999998 99
Q ss_pred HHhcCCCCCCC
Q psy12288 379 DCLRHPWLNPR 389 (393)
Q Consensus 379 ell~hp~~~~~ 389 (393)
|+++||||++.
T Consensus 292 ~ll~h~~~~~~ 302 (364)
T cd05599 292 EIKSHPFFKGV 302 (364)
T ss_pred HHhcCCCcCCC
Confidence 99999999875
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=326.30 Aligned_cols=253 Identities=25% Similarity=0.420 Sum_probs=205.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||||++.... .....+..|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA--------------DSPWIVKL 66 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc--------------CCCCccch
Confidence 47999999999999999999999999999999987532 2335567888999988 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.+.++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~- 138 (350)
T cd05573 67 YYSFQ----DEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADG- 138 (350)
T ss_pred hhhee----cCCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCC-
Confidence 98887 677899999999 78888888765 4589999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--------------------- 241 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--------------------- 241 (393)
.++|+|||++.......
T Consensus 139 ------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (350)
T cd05573 139 ------------------------------------------HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR 176 (350)
T ss_pred ------------------------------------------CEEeecCCCCccCcccCccccccccccccccccccccc
Confidence 49999999987653322
Q ss_pred -----------CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 242 -----------ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 242 -----------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+ .......+.......
T Consensus 177 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~- 249 (350)
T cd05573 177 RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT------LQETYNKIINWKESL- 249 (350)
T ss_pred ccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC------HHHHHHHHhccCCcc-
Confidence 23468999999999999999999999999999999999999997544 111222221100000
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-HHHHhcCCCCCCC
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-AADCLRHPWLNPR 389 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~ell~hp~~~~~ 389 (393)
..+.....+..+.+||.+||. ||.+||+ ++++++||||+++
T Consensus 250 -------------------------------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 250 -------------------------------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred -------------------------------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 000011246788899999998 9999999 9999999999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=313.92 Aligned_cols=293 Identities=25% Similarity=0.363 Sum_probs=209.1
Q ss_pred EEEecccCceEEEEEEeCC--CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
..+||+|+||.||+|.+.. +++.||+|.+.... ......+|+.+++.+ .|+|++++.+.+...
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l--------------~h~niv~~~~~~~~~ 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLREL--------------KHPNVISLQKVFLSH 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhc--------------CCCCCcceeeeEecC
Confidence 4689999999999998664 57889999887543 345578899999999 899999998887532
Q ss_pred cCCCeEEEEEEeeccccHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 111 SRNGTHICMVFEVMGYNLLRLIARSD-------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~~l~~~~~~~~-------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+..++++||++++++...+.... ...++...++.++.|++.||.|||++ |++||||||+|||++.+..
T Consensus 71 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~- 146 (317)
T cd07868 71 --ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGP- 146 (317)
T ss_pred --CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCC-
Confidence 456789999999989888775321 22478899999999999999999998 9999999999999954321
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHh
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~ 257 (393)
....+||+|||+++..... .....+|+.|+|||++.
T Consensus 147 --------------------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 188 (317)
T cd07868 147 --------------------------------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 188 (317)
T ss_pred --------------------------------------CcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHc
Confidence 0125999999998765432 22456799999999998
Q ss_pred cC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 258 GA-GYGPAADIWSTACMAFELATGDYLFDPKAGKE---YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 258 ~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+. .++.++||||+||++|+|++|++||....... ......++..+....|..+...+....+..............
T Consensus 189 ~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T cd07868 189 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN 268 (317)
T ss_pred CCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcc
Confidence 75 47999999999999999999999997554321 122346677788888876665554432211000000000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... .......+... ....+..+.+||++||+.||.+|||++|+++||||
T Consensus 269 ~~~-~~~~~~~~~~~---~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 269 TYT-NCSLIKYMEKH---KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred ccC-cccccchHHhc---CCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000 00000000000 01224567899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >KOG0192|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=317.01 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=200.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCce-EEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTF-VALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~-vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
....+.+.||+|+||.||+|.+. |+. ||||++...... ...+.+|+.+|.++ .||||+++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l--------------~HpNIV~f 104 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRL--------------RHPNIVQF 104 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhC--------------CCCCeeeE
Confidence 34566677999999999999776 444 999998754322 45899999999999 89999999
Q ss_pred cccceeecCCCe-EEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC-eeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGT-HICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR-IIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~-~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~-i~H~dlkp~NIl~~~~ 180 (393)
++.+. ... ..++||||+ +|+|.+++.......++...+..++.||+.|+.|||++ + |+|||||++|||++.+
T Consensus 105 ~G~~~----~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~ 179 (362)
T KOG0192|consen 105 YGACT----SPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLK 179 (362)
T ss_pred EEEEc----CCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCC
Confidence 99887 333 689999999 88888888764345699999999999999999999998 9 9999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~ 257 (393)
+. ++||+|||+++... .......||+.|||||++.
T Consensus 180 ~~------------------------------------------~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~ 217 (362)
T KOG0192|consen 180 GK------------------------------------------TLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLR 217 (362)
T ss_pred CC------------------------------------------EEEECCCccceeeccccccccCCCCCccccChhhhc
Confidence 51 59999999998665 3344568999999999999
Q ss_pred --cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 258 --GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 258 --~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
...++.++||||||+++|||++|+.||.... . .++...+...+..|.
T Consensus 218 ~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~------~-~~~~~~v~~~~~Rp~------------------------ 266 (362)
T KOG0192|consen 218 GEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA------P-VQVASAVVVGGLRPP------------------------ 266 (362)
T ss_pred CCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC------H-HHHHHHHHhcCCCCC------------------------
Confidence 5689999999999999999999999998666 2 222323222222222
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
++..++..+..+|.+||..||.+||++.+++.
T Consensus 267 ---------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 267 ---------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ---------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 33456788899999999999999999998764
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=327.29 Aligned_cols=251 Identities=20% Similarity=0.348 Sum_probs=200.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~hp~iv~~ 66 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES--------------DSPWVVSL 66 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC--------------CCCCcceE
Confidence 37999999999999999999999999999999886432 2234567788888887 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ++.++++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~- 138 (377)
T cd05629 67 YYSFQ----DAQYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGG- 138 (377)
T ss_pred EEEEE----cCCeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCC-
Confidence 99887 677899999999 78888888654 4588999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (377)
T cd05629 139 ------------------------------------------HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNR 176 (377)
T ss_pred ------------------------------------------CEEEeecccccccccccccccccccccccccccccccc
Confidence 4899999987532100
Q ss_pred ----------------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCC
Q psy12288 241 ----------------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292 (393)
Q Consensus 241 ----------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~ 292 (393)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---- 252 (377)
T cd05629 177 NSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSEN---- 252 (377)
T ss_pred cccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCC----
Confidence 002368999999999998889999999999999999999999997544
Q ss_pred CCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccC
Q psy12288 293 SRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVN 370 (393)
Q Consensus 293 ~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~d 370 (393)
.......+...... ..++ ...+..+.+||.+||. +
T Consensus 253 --~~~~~~~i~~~~~~----------------------------------------~~~p~~~~~s~~~~dli~~lL~-~ 289 (377)
T cd05629 253 --SHETYRKIINWRET----------------------------------------LYFPDDIHLSVEAEDLIRRLIT-N 289 (377)
T ss_pred --HHHHHHHHHccCCc----------------------------------------cCCCCCCCCCHHHHHHHHHHhc-C
Confidence 12222222111000 0011 1245678899999998 7
Q ss_pred CCCC---cCHHHHhcCCCCCCC
Q psy12288 371 QKLR---ASAADCLRHPWLNPR 389 (393)
Q Consensus 371 P~~R---pt~~ell~hp~~~~~ 389 (393)
|.+| +++.|+++||||+++
T Consensus 290 ~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 290 AENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred HhhcCCCCCHHHHhcCCCcCCC
Confidence 7776 599999999999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=318.99 Aligned_cols=242 Identities=23% Similarity=0.357 Sum_probs=197.5
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|++..+++.||+|++... ......+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~~~~--- 63 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV--------------NCPFIVPLKFSFQ--- 63 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCcEeceeeEEe---
Confidence 69999999999999999999999998743 22234567788899888 8999999988886
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+... ..+++..+..++.|++.||.|||++ |++||||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~--------- 130 (312)
T cd05585 64 -SPEKLYLVLAFINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQG--------- 130 (312)
T ss_pred -cCCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCC---------
Confidence 567899999999 78888888654 3488999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCCCchhhH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGYGPAADI 267 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di 267 (393)
.++|+|||++..... ......||+.|+|||++.+..++.++||
T Consensus 131 ----------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv 176 (312)
T cd05585 131 ----------------------------------HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176 (312)
T ss_pred ----------------------------------cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccce
Confidence 499999999875321 1233468999999999999889999999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
|||||++|+|++|..||.+.+. ...... +...
T Consensus 177 wslGvil~el~tg~~pf~~~~~------~~~~~~------------------------------------------~~~~ 208 (312)
T cd05585 177 WTLGVLLYEMLTGLPPFYDENV------NEMYRK------------------------------------------ILQE 208 (312)
T ss_pred echhHHHHHHHhCCCCcCCCCH------HHHHHH------------------------------------------HHcC
Confidence 9999999999999999975431 111111 1111
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCc---CHHHHhcCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRA---SAADCLRHPWLNPR 389 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~ell~hp~~~~~ 389 (393)
...++...+..+.++|.+||..||.+|| ++.|++.||||++.
T Consensus 209 ~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 209 PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 2223445667889999999999999997 58999999999975
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=316.74 Aligned_cols=250 Identities=23% Similarity=0.361 Sum_probs=199.7
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
|++.+.||+|+||.||+|.+..+++.||||+++... ...+.+.+|..++..+.. ..|+|++++++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~-----------l~hp~i~~~~~ 69 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS-----------ERHPFLVNLFA 69 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc-----------cCCCChhceee
Confidence 788999999999999999999999999999987532 223445666666655421 27999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+.+.++||||+ +++|...+.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 70 ~~~----~~~~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~--- 138 (324)
T cd05589 70 CFQ----TEDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEG--- 138 (324)
T ss_pred EEE----cCCEEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCC---
Confidence 887 667899999999 6777766643 3489999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||++.... .......|++.|+|||.+.+..+
T Consensus 139 ----------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 178 (324)
T cd05589 139 ----------------------------------------FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSY 178 (324)
T ss_pred ----------------------------------------cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCC
Confidence 49999999876432 22334568999999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+|||||++|+|++|+.||.+.+ .......+..
T Consensus 179 ~~~~DiwslG~il~el~~G~~pf~~~~------~~~~~~~i~~------------------------------------- 215 (324)
T cd05589 179 TRAVDWWGLGVLIYEMLVGESPFPGDD------EEEVFDSIVN------------------------------------- 215 (324)
T ss_pred CcccchhhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh-------------------------------------
Confidence 999999999999999999999997544 1222221111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||.+|| ++.++++||||++.
T Consensus 216 -----~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 216 -----DEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 11112234566788999999999999999 79999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0201|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=319.71 Aligned_cols=252 Identities=28% Similarity=0.451 Sum_probs=211.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..|+..+.||+|+||.||+|.+..+++.||||++.... ...+.+++|+.+|..+ .+++|.+.++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~--------------~~~~it~yyg 78 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC--------------DSPNITEYYG 78 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc--------------CcchHHhhhh
Confidence 46888899999999999999999999999999987543 3346788999999999 7899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+..+|++|||| +|++.+++..+. .+.+.++.-++++++.|+.|||.+ +.+|||||+.||++..++
T Consensus 79 syl----~g~~LwiiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g--- 148 (467)
T KOG0201|consen 79 SYL----KGTKLWIIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESG--- 148 (467)
T ss_pred hee----ecccHHHHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccC---
Confidence 998 778899999999 888888887654 247888888999999999999999 999999999999998886
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||.+..+... ....+||+.|||||++....|
T Consensus 149 ----------------------------------------~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y 188 (467)
T KOG0201|consen 149 ----------------------------------------DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGY 188 (467)
T ss_pred ----------------------------------------cEEEEecceeeeeechhhccccccccccccchhhhccccc
Confidence 3999999998765432 356789999999999998899
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||||++.+||++|.+|+....++. ++-.+|...
T Consensus 189 ~~KADIWSLGITaiEla~GePP~s~~hPmr-------------vlflIpk~~---------------------------- 227 (467)
T KOG0201|consen 189 DTKADIWSLGITAIELAKGEPPHSKLHPMR-------------VLFLIPKSA---------------------------- 227 (467)
T ss_pred cchhhhhhhhHHHHHHhcCCCCCcccCcce-------------EEEeccCCC----------------------------
Confidence 999999999999999999999997666422 111111100
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+....+..|.+|+..||+.||+.||+|.+||+|+|++.-+
T Consensus 228 ------PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 228 ------PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred ------CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 0012346678899999999999999999999999999998744
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=324.16 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=198.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|+++++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+++++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l--------------~h~~iv~l~ 67 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA--------------DNEWVVKLY 67 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc--------------CCCCeeeeE
Confidence 5899999999999999999999999999999987532 2234577899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. ...++++||||+ +++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~-- 138 (381)
T cd05626 68 YSFQ----DKDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDG-- 138 (381)
T ss_pred EEEe----cCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCC--
Confidence 9887 667899999999 77888887664 3488999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------------------------
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------------------------ 239 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------------------------ 239 (393)
+++|+|||++.....
T Consensus 139 -----------------------------------------~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (381)
T cd05626 139 -----------------------------------------HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLW 177 (381)
T ss_pred -----------------------------------------CEEEeeCcCCcccccccccccccccccccccccCccccc
Confidence 489999998643210
Q ss_pred --------------------------CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCC
Q psy12288 240 --------------------------HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYS 293 (393)
Q Consensus 240 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~ 293 (393)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~---- 253 (381)
T cd05626 178 DDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTP---- 253 (381)
T ss_pred ccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCH----
Confidence 00124689999999999988899999999999999999999999975441
Q ss_pred CcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhcccc--CC
Q psy12288 294 RDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV--NQ 371 (393)
Q Consensus 294 ~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~--dP 371 (393)
......+....... ..+.....+.++.+||.+|++. +|
T Consensus 254 --~~~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~dli~~ll~~~~~~ 293 (381)
T cd05626 254 --TETQLKVINWENTL--------------------------------------HIPPQVKLSPEAVDLITKLCCSAEER 293 (381)
T ss_pred --HHHHHHHHcccccc--------------------------------------CCCCCCCCCHHHHHHHHHHccCcccc
Confidence 11111111100000 0000123456788999986654 45
Q ss_pred CCCcCHHHHhcCCCCCCC
Q psy12288 372 KLRASAADCLRHPWLNPR 389 (393)
Q Consensus 372 ~~Rpt~~ell~hp~~~~~ 389 (393)
..|++++++++||||.++
T Consensus 294 ~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 294 LGRNGADDIKAHPFFSEV 311 (381)
T ss_pred cCCCCHHHHhcCcccCCC
Confidence 559999999999999874
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-42 Score=327.00 Aligned_cols=252 Identities=21% Similarity=0.352 Sum_probs=200.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++++.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ .|+++++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~h~~iv~~~ 67 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA--------------DNEWVVKLY 67 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC--------------CCCCcceEE
Confidence 6999999999999999999999999999999986432 2235577899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .++.+++||||+ +++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~-- 138 (376)
T cd05598 68 YSFQ----DKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDG-- 138 (376)
T ss_pred EEEE----cCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCC--
Confidence 8887 677899999999 78888888664 3488999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------------------------
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------------------------ 239 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------------------------ 239 (393)
.++|+|||++..+..
T Consensus 139 -----------------------------------------~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (376)
T cd05598 139 -----------------------------------------HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW 177 (376)
T ss_pred -----------------------------------------CEEEEeCCCCccccccccccccccccccccccccccccc
Confidence 499999998642210
Q ss_pred ----------------------CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHH
Q psy12288 240 ----------------------HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDD 297 (393)
Q Consensus 240 ----------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~ 297 (393)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+. ..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~ 251 (376)
T cd05598 178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTP------AE 251 (376)
T ss_pred cccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCH------HH
Confidence 00123689999999999998899999999999999999999999976542 11
Q ss_pred HHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc--
Q psy12288 298 HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-- 375 (393)
Q Consensus 298 ~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-- 375 (393)
....+....... ..+.....+..+.++|.+|+ .+|.+|+
T Consensus 252 ~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 252 TQLKVINWETTL--------------------------------------HIPSQAKLSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred HHHHHhccCccc--------------------------------------cCCCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence 111111000000 00011234567788999976 5999999
Q ss_pred -CHHHHhcCCCCCCC
Q psy12288 376 -SAADCLRHPWLNPR 389 (393)
Q Consensus 376 -t~~ell~hp~~~~~ 389 (393)
++.|+++||||+++
T Consensus 293 ~t~~ell~h~~~~~~ 307 (376)
T cd05598 293 NGADEIKAHPFFKGI 307 (376)
T ss_pred CCHHHHhCCCCcCCC
Confidence 99999999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=325.47 Aligned_cols=252 Identities=22% Similarity=0.353 Sum_probs=199.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|+++++||+|+||.||+|++..+++.||+|.+.... .....+.+|+.+++.+ .|+++++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~--------------~h~~iv~~~ 67 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA--------------DNEWVVRLY 67 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC--------------CCCcCCeEE
Confidence 6999999999999999999999999999999987532 2235677899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+..+++||||+ +++|.+.+.+. ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g-- 138 (382)
T cd05625 68 YSFQ----DKDNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDG-- 138 (382)
T ss_pred EEEE----eCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC--
Confidence 9887 667899999999 77888887664 3488999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------------------------
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------------------------ 239 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------------------------ 239 (393)
.++|+|||++.....
T Consensus 139 -----------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (382)
T cd05625 139 -----------------------------------------HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW 177 (382)
T ss_pred -----------------------------------------CEEEeECCCCccccccccccccccccccccccccccccc
Confidence 499999998642210
Q ss_pred --------------------------CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCC
Q psy12288 240 --------------------------HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYS 293 (393)
Q Consensus 240 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~ 293 (393)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---- 253 (382)
T cd05625 178 GDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTP---- 253 (382)
T ss_pred cccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCH----
Confidence 00123689999999999998999999999999999999999999975441
Q ss_pred CcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC
Q psy12288 294 RDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373 (393)
Q Consensus 294 ~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 373 (393)
......+....... ..+.....++.+.++|.+|+ .+|.+
T Consensus 254 --~~~~~~i~~~~~~~--------------------------------------~~p~~~~~s~~~~~li~~l~-~~p~~ 292 (382)
T cd05625 254 --LETQMKVINWQTSL--------------------------------------HIPPQAKLSPEASDLIIKLC-RGPED 292 (382)
T ss_pred --HHHHHHHHccCCCc--------------------------------------CCCCcccCCHHHHHHHHHHc-cCHhH
Confidence 11111111100000 00001234567889999876 59999
Q ss_pred CcC---HHHHhcCCCCCCC
Q psy12288 374 RAS---AADCLRHPWLNPR 389 (393)
Q Consensus 374 Rpt---~~ell~hp~~~~~ 389 (393)
|++ ++++++||||+.+
T Consensus 293 R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 293 RLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred cCCCCCHHHHhcCCCcCCc
Confidence 997 9999999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=315.35 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=198.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+..|..+++.+. .+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~ 67 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-------------KPPFLTQLH 67 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC-------------CCCceeeeE
Confidence 4899999999999999999999999999999987532 22344567777777762 234567777
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. ....+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~-- 138 (324)
T cd05587 68 SCFQ----TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEG-- 138 (324)
T ss_pred EEEE----cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCC--
Confidence 7776 566799999999 78888877654 3488999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++.... .......||+.|+|||++.+..
T Consensus 139 -----------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 177 (324)
T cd05587 139 -----------------------------------------HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP 177 (324)
T ss_pred -----------------------------------------CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCC
Confidence 49999999876432 1223346899999999999988
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|+.||.+.+ .......+..
T Consensus 178 ~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~------------------------------------ 215 (324)
T cd05587 178 YGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQSIME------------------------------------ 215 (324)
T ss_pred CCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHc------------------------------------
Confidence 9999999999999999999999996543 2222222211
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
....++...+..+.+++++||..||.+|+++ +++++||||+..
T Consensus 216 ------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 216 ------HNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred ------CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 1111233456678899999999999999986 899999999875
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-41 Score=321.28 Aligned_cols=289 Identities=26% Similarity=0.401 Sum_probs=217.8
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCC--CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
..+..+..+|++++.||+|+||.||+|.... ++..|++|.+... ....+|+.+++.+ .|+
T Consensus 85 ~~~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l--------------~h~ 146 (392)
T PHA03207 85 DPASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTI--------------SHR 146 (392)
T ss_pred CcchhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhc--------------CCC
Confidence 3445566789999999999999999997643 4678999987643 3456899999999 899
Q ss_pred cceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|++++++.+. .....+++||++++++..++... ..+++.++..++.||+.||+|||++ ||+||||||+|||++
T Consensus 147 ~iv~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~ 219 (392)
T PHA03207 147 AIINLIHAYR----WKSTVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLD 219 (392)
T ss_pred CccceeeeEe----eCCEEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEc
Confidence 9999998886 56679999999999999988443 4589999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSV 253 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aP 253 (393)
.++ .++|+|||++...... .....||+.|+||
T Consensus 220 ~~~-------------------------------------------~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aP 256 (392)
T PHA03207 220 EPE-------------------------------------------NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSP 256 (392)
T ss_pred CCC-------------------------------------------CEEEccCccccccCcccccccccccccccCccCH
Confidence 766 4999999998765432 1234689999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc-cccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL-RYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~ 332 (393)
|++.+..++.++|||||||++|+|++|+.||.+..... ...++..+.+..+..|.+......... ..+.. ...
T Consensus 257 E~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 330 (392)
T PHA03207 257 ELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS---SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ---YAI 330 (392)
T ss_pred hHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC---cHHHHHHHHHHhccCccccCCccchhHHHHHHh---hcc
Confidence 99999889999999999999999999999997765543 566777777777765543321110000 00000 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+......+. ....+..+.++|++||..||.+|||+.|+|.||||+..
T Consensus 331 -~~~~~~~~~~~~~-----~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 331 -VLRPPYTIPPVIR-----KYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred -cccCCccccchhh-----ccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 0000000000000 01234577899999999999999999999999999864
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=318.80 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=197.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ .|++++++.+.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~~~~~~- 65 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT--------------RHPFLTSLKYSFQ- 65 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCcceEEEEE-
Confidence 36899999999999999999999999987532 2234566788888888 8899999988877
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ..+++.+++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 66 ---~~~~~~lv~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~------- 132 (328)
T cd05593 66 ---TKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDG------- 132 (328)
T ss_pred ---cCCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCC-------
Confidence 677899999999 77887777554 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.+||+|||++..... ......||+.|+|||++.+..++.++
T Consensus 133 ------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 176 (328)
T cd05593 133 ------------------------------------HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAV 176 (328)
T ss_pred ------------------------------------cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccC
Confidence 499999999875322 22345689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||...+. ......+ .
T Consensus 177 DiwslGvil~elltG~~Pf~~~~~------~~~~~~~------------------------------------------~ 208 (328)
T cd05593 177 DWWGLGVVMYEMMCGRLPFYNQDH------EKLFELI------------------------------------------L 208 (328)
T ss_pred CccccchHHHHHhhCCCCCCCCCH------HHHHHHh------------------------------------------c
Confidence 999999999999999999965431 1111111 0
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||..||.+|+ ++.|+++||||.+.
T Consensus 209 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 209 MEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred cCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 011123345567888999999999999997 89999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=317.49 Aligned_cols=254 Identities=22% Similarity=0.353 Sum_probs=199.4
Q ss_pred eEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+|++.++||+|+||.||+|++. .+++.||+|++.... ...+.+..|+.+++.+. .|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------------~~~~i 67 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-------------QSPFL 67 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCCc
Confidence 4899999999999999999874 468899999987432 22345677888888873 57888
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .....++||||+ +++|.+.+... ..++++++..++.||+.||+|||++ |++||||||+|||++.
T Consensus 68 ~~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~ 140 (332)
T cd05614 68 VTLHYAFQ----TEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDS 140 (332)
T ss_pred ccEEEEEe----cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECC
Confidence 88887776 667799999999 78888888664 3488999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++...... .....||+.|+|||+
T Consensus 141 ~~-------------------------------------------~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~ 177 (332)
T cd05614 141 EG-------------------------------------------HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEI 177 (332)
T ss_pred CC-------------------------------------------CEEEeeCcCCccccccCCCccccccCCccccCHHH
Confidence 76 4999999998754221 223468999999999
Q ss_pred HhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+. .++.++|||||||++|+|++|+.||....... ....+...
T Consensus 178 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~~~~~-------------------------------- 222 (332)
T cd05614 178 IRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN---TQSEVSRR-------------------------------- 222 (332)
T ss_pred hcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC---CHHHHHHH--------------------------------
Confidence 9875 47889999999999999999999996543221 11111110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
+......++...+..+.+++.+||..||.+|| +++++++||||++.
T Consensus 223 ---------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 223 ---------ILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred ---------HhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 00111122344567788999999999999999 88999999999875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=321.52 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=202.8
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
....++|++.++||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ .|++
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~--------------~hp~ 104 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--------------NSPW 104 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC--------------CCCC
Confidence 334578999999999999999999999999999999986422 1234467888888888 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++++.+. .+.++++||||+ +++|.+++... .+++..+..++.||+.||+|||++ ||+||||||+|||++
T Consensus 105 iv~~~~~~~----~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~ 176 (370)
T cd05621 105 VVQLFCAFQ----DDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLD 176 (370)
T ss_pred EeeEEEEEE----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEC
Confidence 999998887 677899999999 78888887553 378899999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVE 254 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE 254 (393)
.++ .+||+|||++...... .....||+.|+|||
T Consensus 177 ~~~-------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE 213 (370)
T cd05621 177 KHG-------------------------------------------HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPE 213 (370)
T ss_pred CCC-------------------------------------------CEEEEecccceecccCCceecccCCCCcccCCHH
Confidence 766 4999999998765432 22456899999999
Q ss_pred HHhcCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 255 VLIGAG----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 255 ~~~~~~----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
++.+.+ ++.++|+|||||++|+|++|+.||.+.+ .......+........
T Consensus 214 ~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~-------------------- 267 (370)
T cd05621 214 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS------LVGTYSKIMDHKNSLN-------------------- 267 (370)
T ss_pred HHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCcccC--------------------
Confidence 998653 6889999999999999999999997554 2222222222111000
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
.+-....+..+.+++.+||..++.+ |+++.|+++||||++.
T Consensus 268 ------------------~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 268 ------------------FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred ------------------CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 0001234667889999999855543 8899999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=314.63 Aligned_cols=245 Identities=24% Similarity=0.364 Sum_probs=195.9
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|++.... ........|..++..+. .|++++++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~iv~~~~~~~- 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-------------NHPFLTQLYCCFQ- 66 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-------------CCCchhceeeEEE-
Confidence 36899999999999999999999999987532 22234456777766652 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~iv~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~------- 133 (320)
T cd05590 67 ---TPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEG------- 133 (320)
T ss_pred ---cCCEEEEEEcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCC-------
Confidence 667899999999 67888777654 3488999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (320)
T cd05590 134 ------------------------------------HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSV 177 (320)
T ss_pred ------------------------------------cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCcc
Confidence 49999999876432 223345689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+|||||++|+|++|+.||...+ .......+..
T Consensus 178 DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~----------------------------------------- 210 (320)
T cd05590 178 DWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILN----------------------------------------- 210 (320)
T ss_pred chhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhc-----------------------------------------
Confidence 99999999999999999997544 1222221111
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH------HHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA------ADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||+.||.+||++ +++++||||++.
T Consensus 211 -~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 211 -DEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 1111223345678899999999999999998 999999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=315.05 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=198.5
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.+..+++.||+|+++... .....+..|..+++.+. .|++++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-------------~hp~Iv~~~~~~~- 66 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-------------NHPFLVGLHSCFQ- 66 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCCCCceEEEEE-
Confidence 36899999999999999999999999987532 22344667888887773 6899999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~------- 133 (329)
T cd05588 67 ---TESRLFFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEG------- 133 (329)
T ss_pred ---cCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCC-------
Confidence 667899999999 77888777654 3589999999999999999999998 999999999999997766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++... ........||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (329)
T cd05588 134 ------------------------------------HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177 (329)
T ss_pred ------------------------------------CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCcc
Confidence 4999999988642 1223345789999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCC--cHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSR--DDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
|+|||||++|+|++|+.||.......... ....+. ..
T Consensus 178 DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~-----------------------------------------~~ 216 (329)
T cd05588 178 DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLF-----------------------------------------QV 216 (329)
T ss_pred ceechHHHHHHHHHCCCCcccccccccccccchHHHH-----------------------------------------HH
Confidence 99999999999999999996433221100 000000 11
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
+......++...+..+.++|++||+.||.+||+ ++++++||||+++
T Consensus 217 ~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 217 ILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 111222234456678899999999999999997 7899999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=321.60 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=202.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+++++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~--------------~h~~iv~ 107 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA--------------NSEWIVQ 107 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC--------------CCCCcce
Confidence 358999999999999999999999999999999986432 2234467888999888 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .+.++++||||+ +++|.+.+... .+++..+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 108 ~~~~~~----~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~ 179 (370)
T cd05596 108 LHYAFQ----DDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSG 179 (370)
T ss_pred EEEEEe----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCC
Confidence 998887 677899999999 78888877543 378899999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
.++|+|||++...... .....||+.|+|||++.
T Consensus 180 -------------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 216 (370)
T cd05596 180 -------------------------------------------HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLK 216 (370)
T ss_pred -------------------------------------------CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhc
Confidence 4999999998765322 23456899999999997
Q ss_pred cC----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 258 GA----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 258 ~~----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+. .++.++|+|||||++|+|++|+.||.+.+. ......+......
T Consensus 217 ~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~------------------------- 265 (370)
T cd05596 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMDHKNS------------------------- 265 (370)
T ss_pred cCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH------HHHHHHHHcCCCc-------------------------
Confidence 64 378899999999999999999999976541 1222222110000
Q ss_pred cCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
..++ ...+..+.+||++||..+|.+ |++++|+++||||++.
T Consensus 266 ---------------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 266 ---------------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred ---------------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 0011 135678889999999999988 9999999999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=306.66 Aligned_cols=255 Identities=24% Similarity=0.344 Sum_probs=203.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|++.++||+|+||.||++.+..+++.||+|.+..... ....+.+|+.+++.+ .|++++++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV--------------NSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc--------------CCCCEeeee
Confidence 48999999999999999999999999999998864321 123456799999998 789999998
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+.+.++||||+ +++|...+.......+++..+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~-- 139 (285)
T cd05605 67 YAYE----TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYG-- 139 (285)
T ss_pred eeec----CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCC--
Confidence 8876 567899999999 67887776554444589999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....+++.|+|||++.+..+
T Consensus 140 -----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (285)
T cd05605 140 -----------------------------------------HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERY 178 (285)
T ss_pred -----------------------------------------CEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCC
Confidence 4999999998765322 223468899999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||+||++|+|++|+.||.+.... .....+.....
T Consensus 179 ~~~~Diws~G~~l~el~~g~~pf~~~~~~------~~~~~~~~~~~---------------------------------- 218 (285)
T cd05605 179 TFSPDWWGLGCLIYEMIEGKSPFRQRKEK------VKREEVERRVK---------------------------------- 218 (285)
T ss_pred CccccchhHHHHHHHHHHCCCCCCCCchh------hHHHHHHHHhh----------------------------------
Confidence 99999999999999999999999754321 11111111000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||.+||..||.+|| +++++++||||+..
T Consensus 219 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 219 ----EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred ----hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 001112234567788999999999999999 89999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=315.38 Aligned_cols=244 Identities=23% Similarity=0.350 Sum_probs=197.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..++..||+|++.... .....+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~i~~~~~~~~- 65 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--------------RHPFLTALKYAFQ- 65 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC--------------CCCCCcceeeEEe-
Confidence 36899999999999999999999999987532 1234456788888888 8899999988887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 66 ---~~~~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~------- 132 (323)
T cd05595 66 ---THDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDG------- 132 (323)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCC-------
Confidence 567899999999 77887776554 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++..... ......||+.|+|||++.+..++.++
T Consensus 133 ------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 176 (323)
T cd05595 133 ------------------------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 176 (323)
T ss_pred ------------------------------------CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchh
Confidence 499999998765321 12335689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||...+. ......+.
T Consensus 177 DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~~~------------------------------------------ 208 (323)
T cd05595 177 DWWGLGVVMYEMMCGRLPFYNQDH------ERLFELIL------------------------------------------ 208 (323)
T ss_pred chhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHh------------------------------------------
Confidence 999999999999999999965431 11111111
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|.+||..||.+|| ++.++++||||.+.
T Consensus 209 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 209 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred cCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 111123345567888999999999999998 89999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=308.46 Aligned_cols=293 Identities=26% Similarity=0.372 Sum_probs=210.9
Q ss_pred EEEecccCceEEEEEEeCC--CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
..+||+|+||.||+|.... ++..||+|.+.... ....+.+|+.+++.+ .|+|++++.+.+...
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l--------------~h~niv~~~~~~~~~ 70 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLREL--------------KHPNVIALQKVFLSH 70 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhC--------------CCCCeeeEEEEEecc
Confidence 4689999999999998664 56789999887543 335678899999999 899999998887532
Q ss_pred cCCCeEEEEEEeeccccHHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 111 SRNGTHICMVFEVMGYNLLRLIARS-------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~~l~~~~~~~-------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+...+++|||+++++.+.+... ....+++..+..++.|++.||+|||+. +++||||||+||++..+..
T Consensus 71 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~- 146 (317)
T cd07867 71 --SDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGP- 146 (317)
T ss_pred --CCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCC-
Confidence 45678999999998988877432 112478888999999999999999998 9999999999999954321
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHh
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~ 257 (393)
....++|+|||+++..... .....+|+.|+|||++.
T Consensus 147 --------------------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 188 (317)
T cd07867 147 --------------------------------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 188 (317)
T ss_pred --------------------------------------CCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhc
Confidence 0125999999998765432 22346789999999998
Q ss_pred cC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 258 GA-GYGPAADIWSTACMAFELATGDYLFDPKAGKE---YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 258 ~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+. .++.++|||||||++|+|++|++||....... ......++..+....|......+....+...+..........
T Consensus 189 ~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T cd07867 189 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRT 268 (317)
T ss_pred CCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhccc
Confidence 75 47899999999999999999999997544321 112345667777777776665555443332222221111111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... ............+..+.+||.+||..||.+|||+.|+++||||
T Consensus 269 ~~~~~~----~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 269 TYANSS----LIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred ccCCch----hhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 100000 0001111122345678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=312.86 Aligned_cols=250 Identities=21% Similarity=0.310 Sum_probs=199.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|++..+++.||+|++...... ......|..++..+. .|++++++.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~ 67 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-------------KPPFLTQLH 67 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCeEeeEE
Confidence 488999999999999999999999999999998754221 123345556665552 567888888
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+++. .....++||||+ +++|...+... ..+++.++..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~-- 138 (323)
T cd05616 68 SCFQ----TMDRLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEG-- 138 (323)
T ss_pred EEEe----cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCC--
Confidence 8876 567899999999 78888887654 3488999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++.... .......||+.|+|||++.+..
T Consensus 139 -----------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 177 (323)
T cd05616 139 -----------------------------------------HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP 177 (323)
T ss_pred -----------------------------------------cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCC
Confidence 49999999987432 1223456899999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|+.||...+ .......+..
T Consensus 178 ~~~~~DiwSlGvil~elltg~~Pf~~~~------~~~~~~~i~~------------------------------------ 215 (323)
T cd05616 178 YGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIME------------------------------------ 215 (323)
T ss_pred CCCccchhchhHHHHHHHhCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence 9999999999999999999999997544 2222222221
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
....++...+..+.+++.+||..||.+|+++ .++++||||+..
T Consensus 216 ------~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 216 ------HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred ------CCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 1112234456778899999999999999984 899999999865
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=312.50 Aligned_cols=246 Identities=22% Similarity=0.317 Sum_probs=194.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|++..+++.||+|.++... ........|..++.... .|++++++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~~~~~- 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW-------------ENPFLTHLYCTFQ- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc-------------CCCCccCeeEEEE-
Confidence 46999999999999999999999999987542 12234455666665441 6889999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
..+++++||||+ +++|...+... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~------- 133 (316)
T cd05620 67 ---TKEHLFFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDG------- 133 (316)
T ss_pred ---eCCEEEEEECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCC-------
Confidence 667899999999 77888877654 3488999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (316)
T cd05620 134 ------------------------------------HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSV 177 (316)
T ss_pred ------------------------------------CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCccc
Confidence 49999999876431 223345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|..||.+.+ .......+...
T Consensus 178 DiwslGvil~el~~g~~Pf~~~~------~~~~~~~~~~~---------------------------------------- 211 (316)
T cd05620 178 DWWSFGVLLYEMLIGQSPFHGDD------EDELFESIRVD---------------------------------------- 211 (316)
T ss_pred chhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhC----------------------------------------
Confidence 99999999999999999997544 11111111110
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH-HHHhcCCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA-ADCLRHPWLNPRR 390 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell~hp~~~~~~ 390 (393)
...++...+..+.++|++||..||.+||++ +++++||||++..
T Consensus 212 --~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 212 --TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 001122345678899999999999999997 5899999998763
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=313.05 Aligned_cols=290 Identities=23% Similarity=0.340 Sum_probs=208.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..++|++.++||+|+||.||+|.+..++..+|+|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~ 68 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC--------------NSPYIVGF 68 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC--------------CCCcccce
Confidence 3468999999999999999999999999999999877532 2235678999999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.+.++||||+ +++|.+++... ..++...+..++.|++.||+|||+..+++|+||||+||+++.++
T Consensus 69 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~- 141 (333)
T cd06650 69 YGAFY----SDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG- 141 (333)
T ss_pred eEEEE----ECCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC-
Confidence 99887 566899999999 77888888654 34888999999999999999999754799999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||++.+..+
T Consensus 142 ------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 179 (333)
T cd06650 142 ------------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 179 (333)
T ss_pred ------------------------------------------CEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCC
Confidence 4999999998754332 234468999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe--eeccCCCc-
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF--RRIDNLKP- 338 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 338 (393)
+.++|+|||||++|+|++|+.||...... .+....+.......... .........+.. ...+...+
T Consensus 180 ~~~~DvwslG~il~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (333)
T cd06650 180 SVQSDIWSMGLSLVEMAIGRYPIPPPDAK----------ELELMFGCPVEGDPAES-ETSPRPRPPGRPLSSYGPDSRPP 248 (333)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcchh----------HHHHHhcCcccCCcccc-ccCcccCCccchhhhhccccccc
Confidence 99999999999999999999999654321 11111111000000000 000000000000 00000000
Q ss_pred chhHHHH----hhh-ccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 339 WGLYQVL----TEK-YHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~----~~~-~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....... ... ..++ ...+.++.+||.+||..||++|||+.|+++||||+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 249 MAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred ccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0011111 100 0111 1246778999999999999999999999999999875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=304.20 Aligned_cols=277 Identities=27% Similarity=0.417 Sum_probs=208.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..++..||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL--------------QHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc--------------CCCCEeeeEE
Confidence 4899999999999999999999999999999886432 2235678899999999 7999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+.+++.+.+..... ..++...+..++.|++.||+|||+. +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~--- 138 (285)
T cd07861 67 VLM----QESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKG--- 138 (285)
T ss_pred EEe----eCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCC---
Confidence 887 5678999999998888888765332 4588999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++|+|||++...... .....+++.|+|||.+.+. .
T Consensus 139 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (285)
T cd07861 139 ----------------------------------------VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPR 178 (285)
T ss_pred ----------------------------------------cEEECcccceeecCCCcccccCCcccccccChHHhcCCCC
Confidence 4999999998755432 2234568899999998764 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|+.||.+.. ....+..+....+..+...+........+ .. ... ...
T Consensus 179 ~~~~~Dv~slG~il~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~-~~~-- 243 (285)
T cd07861 179 YSTPVDIWSIGTIFAEMATKKPLFHGDS------EIDQLFRIFRILGTPTEDVWPGVTSLPDY-KN-----TFP-KWK-- 243 (285)
T ss_pred cCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhcchhhHHH-Hh-----hcc-ccC--
Confidence 6889999999999999999999997654 33444444444444333332211100000 00 000 000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .....+.++.++|++||..||.+|||+.++++||||
T Consensus 244 -~~~~~~---~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 244 -KGSLRS---AVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred -cchhHH---hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000000 112356788899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=316.98 Aligned_cols=285 Identities=28% Similarity=0.366 Sum_probs=207.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|++.+.||+|+||.||+|.+..+++.||+|+... .....|+.+++.+ .|+|++++++.
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-----~~~~~E~~~l~~l--------------~h~~iv~~~~~ 125 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-----GTTLIEAMLLQNV--------------NHPSVIRMKDT 125 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-----cccHHHHHHHHhC--------------CCCCCcChhhe
Confidence 3579999999999999999999999999999997543 2345789999988 89999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...++|||++.+++..++.... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 126 ~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~----- 194 (357)
T PHA03209 126 LV----SGAITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVD----- 194 (357)
T ss_pred EE----eCCeeEEEEEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC-----
Confidence 87 566789999999889998886543 4589999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||..|+|||++.+..++.+
T Consensus 195 --------------------------------------~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 236 (357)
T PHA03209 195 --------------------------------------QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSK 236 (357)
T ss_pred --------------------------------------CEEEecCccccccccCcccccccccccccCCeecCCCCCCch
Confidence 49999999987432 22334568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCC-CCCCCCCCC---CCCCcHHHHHHHHHHhCCCChHHHhcCc--ccccccCCCCCeeeccCCCc
Q psy12288 265 ADIWSTACMAFELATGD-YLFDPKAGK---EYSRDDDHLAHIVELVGPIPKEVLSQGK--KTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~-~pf~~~~~~---~~~~~~~~~~~~~~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 338 (393)
+|||||||++|+|+++. .+|...... .......++..+....+..|..+..... ....+....... ..+
T Consensus 237 ~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 311 (357)
T PHA03209 237 ADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLE-----RQP 311 (357)
T ss_pred hhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccC-----CCc
Confidence 99999999999999854 444332211 0111233445555555554443321100 000000000000 000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
......... ...+..+.+||.+||+.||.+|||+.|+|+||||+++
T Consensus 312 ~~~~~~~~~-----~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 312 YTRYPCFQR-----VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred ccccHHHhc-----cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 000111111 1234566789999999999999999999999999864
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=302.90 Aligned_cols=277 Identities=29% Similarity=0.458 Sum_probs=211.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+|+.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL--------------KHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc--------------CCCCeeeHHH
Confidence 5899999999999999999999999999999886432 2234567899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++++||+++++.+.+.... ..+++..++.++.||+.||.|||+. +++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~---- 136 (284)
T cd07839 67 VLH----SDKKLTLVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNG---- 136 (284)
T ss_pred Hhc----cCCceEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCC----
Confidence 987 566899999999889988876543 4589999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-C
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG-Y 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~-~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+.. +
T Consensus 137 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 177 (284)
T cd07839 137 ---------------------------------------ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 177 (284)
T ss_pred ---------------------------------------cEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCccc
Confidence 4999999998765432 23346688999999987754 6
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||..... ....+..+.+..+..+...+......... .........
T Consensus 178 ~~~~DiwslG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-- 243 (284)
T cd07839 178 STSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEESWPGVSKLPDY-------KPYPMYPAT-- 243 (284)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCcCCCC-----HHHHHHHHHHHhCCCChHHhHHhhhcccc-------cccCCCCCc--
Confidence 8999999999999999999888643321 34566667776666554433221111100 000000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.... ......+..+.++|++||..||.+|||++|+++||||
T Consensus 244 -~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 244 -TSLV---NVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred -chhh---hhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0000 1112356788899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=317.66 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=201.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|+++.... ....+.+|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~--------------~~~~i~~~ 66 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS--------------NSPWIPQL 66 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCcce
Confidence 379999999999999999999999999999999875432 334567788888877 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .....++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~- 139 (330)
T cd05601 67 QYAFQ----DKDNLYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTG- 139 (330)
T ss_pred eeEEe----cCCeEEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCC-
Confidence 88876 567899999999 788888876642 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHh-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLI- 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~- 257 (393)
.++|+|||++....... ....+|+.|+|||++.
T Consensus 140 ------------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (330)
T cd05601 140 ------------------------------------------HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTT 177 (330)
T ss_pred ------------------------------------------CEEeccCCCCeECCCCCceeeecccCCccccCHHHhcc
Confidence 49999999987654321 2246899999999987
Q ss_pred -----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 258 -----GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 258 -----~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
...++.++|||||||++|+|++|+.||...+ .......+..... ...
T Consensus 178 ~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~~~~------------~~~---------- 229 (330)
T cd05601 178 MNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT------SAKTYNNIMNFQR------------FLK---------- 229 (330)
T ss_pred ccccccCCCCCcceeecccceeeeeccCCCCCCCCC------HHHHHHHHHcCCC------------ccC----------
Confidence 3457899999999999999999999997544 1122222211000 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+.....+..+.+||.+||. ||.+|||++++++||||...
T Consensus 230 ----------------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 230 ----------------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 00012345678899999998 99999999999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=321.34 Aligned_cols=296 Identities=23% Similarity=0.323 Sum_probs=211.3
Q ss_pred CCccccccCC-eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 15 GGYCPVQIGD-LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 15 ~~~~~~~~~~-~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
|...|...+. ..+.+|.+.+.||+|+||.||+|.+..+++.||||... .....+|+.+++.+
T Consensus 155 g~~~~~~~~~~~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L------------ 217 (461)
T PHA03211 155 GCKPPSEVAKVVAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRL------------ 217 (461)
T ss_pred CCCCccchhcccccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHC------------
Confidence 3344444443 33568999999999999999999999999999999643 23467899999999
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+||+++++.+. .+...++|||++.++|...+.... ..+++..++.++.|++.||+|||++ ||+||||||+
T Consensus 218 --~HpnIv~l~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~ 289 (461)
T PHA03211 218 --SHPAVLALLDVRV----VGGLTCLVLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTE 289 (461)
T ss_pred --CCCCCCcEEEEEE----ECCEEEEEEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHH
Confidence 8999999998876 566789999999889998886543 3589999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTR 248 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~ 248 (393)
|||++.++ .++|+|||+++..... .....||.
T Consensus 290 NILl~~~~-------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~GT~ 326 (461)
T PHA03211 290 NVLVNGPE-------------------------------------------DICLGDFGAACFARGSWSTPFHYGIAGTV 326 (461)
T ss_pred HEEECCCC-------------------------------------------CEEEcccCCceecccccccccccccCCCc
Confidence 99997665 4999999998755322 11345899
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCC-CCCCCCcHHHHHHHHHHhCCCChHHHhcC--cccccccC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA-GKEYSRDDDHLAHIVELVGPIPKEVLSQG--KKTLRYFT 325 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~-~~~~~~~~~~~~~~~~~~g~~p~~~~~~~--~~~~~~~~ 325 (393)
.|+|||++.+..++.++|||||||++|||++|..++.... .........++..++...+.....+.... +....+..
T Consensus 327 ~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 406 (461)
T PHA03211 327 DTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRH 406 (461)
T ss_pred CCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHh
Confidence 9999999999989999999999999999999876554332 22222334445555544332111110000 00000000
Q ss_pred CCC-CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 326 PQG-NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 326 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
... ..........|. . + ...+..+.+||.+||+.||.+|||+.|+|+||||++
T Consensus 407 ~~~~~~~~~~~~~~~~------~---~-~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 407 RAARNRRPAYTRPAWT------R---Y-YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hhhcccCCccCCcchh------h---h-ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000 000000000000 0 0 123456789999999999999999999999999975
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=319.48 Aligned_cols=251 Identities=19% Similarity=0.363 Sum_probs=200.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.++..+ .|++++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~iv~~ 66 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA--------------DGAWVVKM 66 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 47999999999999999999999999999999987432 2235567788888888 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.++++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~- 138 (360)
T cd05627 67 FYSFQ----DKRNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKG- 138 (360)
T ss_pred EEEEE----cCCEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCC-
Confidence 98887 677899999999 78888887654 3488999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 139 ------------------------------------------~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (360)
T cd05627 139 ------------------------------------------HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNM 176 (360)
T ss_pred ------------------------------------------CEEEeeccCCcccccccccccccccccCCccccccccc
Confidence 4999999987643210
Q ss_pred ----------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH
Q psy12288 241 ----------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304 (393)
Q Consensus 241 ----------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 304 (393)
....+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+. ......+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~------~~~~~~i~~ 250 (360)
T cd05627 177 NSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP------QETYRKVMN 250 (360)
T ss_pred ccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH------HHHHHHHHc
Confidence 1124689999999999999999999999999999999999999975542 122221111
Q ss_pred HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCc---CHHH
Q psy12288 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRA---SAAD 379 (393)
Q Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rp---t~~e 379 (393)
.... ..++ ...+..+.++|.+|+ .||.+|+ ++++
T Consensus 251 ~~~~----------------------------------------~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~e 289 (360)
T cd05627 251 WKET----------------------------------------LVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEE 289 (360)
T ss_pred CCCc----------------------------------------eecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHH
Confidence 0000 0011 124567889999977 4999999 4899
Q ss_pred HhcCCCCCCC
Q psy12288 380 CLRHPWLNPR 389 (393)
Q Consensus 380 ll~hp~~~~~ 389 (393)
+++||||.++
T Consensus 290 i~~hp~f~~~ 299 (360)
T cd05627 290 IKSHPFFEGV 299 (360)
T ss_pred HhcCCCCCCC
Confidence 9999999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0611|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=306.88 Aligned_cols=253 Identities=28% Similarity=0.477 Sum_probs=213.5
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
---.+..+|++.+.||.|+||.|-+|+....|+.||||.++++. ...-.+++|+++|..+ +|
T Consensus 47 hkhnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL--------------NH 112 (668)
T KOG0611|consen 47 HKHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL--------------NH 112 (668)
T ss_pred cccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc--------------CC
Confidence 33345679999999999999999999999999999999887543 2334568999999999 99
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
|||+.++.+|. +.+.++|||||. +|.|.+++.++ +.+++.+++.+++||..|+.|+|++ +++|||||.+|||
T Consensus 113 PhII~IyEVFE----NkdKIvivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENIL 185 (668)
T KOG0611|consen 113 PHIIQIYEVFE----NKDKIVIVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENIL 185 (668)
T ss_pred Cceeehhhhhc----CCceEEEEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhhee
Confidence 99999999998 788899999999 99999999887 4599999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE 254 (393)
+|.|++ +|++|||++..+... ..+.+|++-|.+||
T Consensus 186 LD~N~N-------------------------------------------iKIADFGLSNly~~~kfLqTFCGSPLYASPE 222 (668)
T KOG0611|consen 186 LDQNNN-------------------------------------------IKIADFGLSNLYADKKFLQTFCGSPLYASPE 222 (668)
T ss_pred ecCCCC-------------------------------------------eeeeccchhhhhccccHHHHhcCCcccCCcc
Confidence 999884 999999998766433 45779999999999
Q ss_pred HHhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+..+.+| ++.+|.|||||++|-|+.|..||.+.+. ...+..|.. | + +
T Consensus 223 IvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh------k~lvrQIs~--G------------a--Y---------- 270 (668)
T KOG0611|consen 223 IVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH------KRLVRQISR--G------------A--Y---------- 270 (668)
T ss_pred ccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH------HHHHHHhhc--c------------c--c----------
Confidence 9999998 7899999999999999999999986552 111111111 0 0 0
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
+..+.+..+.-||++||..||++|.|+.++-.|=|++
T Consensus 271 -----------------rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 271 -----------------REPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred -----------------cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 0123345566899999999999999999999998875
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=311.88 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=197.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|++..+++.||+|+++... .....+..|..++..+. .|+|++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-------------~hp~iv~~~~~~~- 66 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-------------NHPFLVGLHSCFQ- 66 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-------------CCCcCCceeeEEE-
Confidence 36899999999999999999999999987532 12234567777776652 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.....++||||+ +++|...+... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~------- 133 (329)
T cd05618 67 ---TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG------- 133 (329)
T ss_pred ---eCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCC-------
Confidence 567899999999 67887776554 3589999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (329)
T cd05618 134 ------------------------------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177 (329)
T ss_pred ------------------------------------CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCcc
Confidence 49999999886432 223345689999999999999899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCC--cHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSR--DDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
|+|||||++|+|++|+.||.......... ....+. ..
T Consensus 178 DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~-----------------------------------------~~ 216 (329)
T cd05618 178 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF-----------------------------------------QV 216 (329)
T ss_pred ceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH-----------------------------------------HH
Confidence 99999999999999999996432211100 000000 11
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
+......++...+..+.++|++||..||.+||+ +.++++||||++.
T Consensus 217 i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 217 ILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 112222344556778889999999999999998 4799999999875
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=311.73 Aligned_cols=245 Identities=23% Similarity=0.319 Sum_probs=195.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.+..+++.||+|++.... .....+..|..+++.+. .|++++++++.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-------------~hp~i~~~~~~~~- 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-------------KHPFLTALHCCFQ- 66 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCCccceeeEEE-
Confidence 36899999999999999999999999987532 12234556777776552 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+..+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~------- 133 (321)
T cd05591 67 ---TKDRLFFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEG------- 133 (321)
T ss_pred ---cCCeEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCC-------
Confidence 667899999999 77887777654 3488999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (321)
T cd05591 134 ------------------------------------HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSV 177 (321)
T ss_pred ------------------------------------CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCcc
Confidence 49999999886532 123344689999999999988899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||...+ ....+..+..
T Consensus 178 DvwslG~il~el~tg~~Pf~~~~------~~~~~~~i~~----------------------------------------- 210 (321)
T cd05591 178 DWWALGVLMYEMMAGQPPFEADN------EDDLFESILH----------------------------------------- 210 (321)
T ss_pred ceechhHHHHHHhcCCCCCCCCC------HHHHHHHHHc-----------------------------------------
Confidence 99999999999999999997554 2222222211
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-------CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-------SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||.+|| +++++++||||.+.
T Consensus 211 -~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 211 -DDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred -CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 11112233456788999999999999999 99999999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=305.58 Aligned_cols=248 Identities=24% Similarity=0.316 Sum_probs=195.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|.+..+++.||+|.+..... ..+.+..|+.+++.+ .|++++++.+.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~i~~~~~~~~--- 63 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV--------------HSRFIVSLAYAFQ--- 63 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC--------------CCCcEeeeeEEEc---
Confidence 6999999999999999999999998864321 124456789999998 7899999988776
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+...++||||+ +++|...+... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~------- 134 (280)
T cd05608 64 -TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDG------- 134 (280)
T ss_pred -CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC-------
Confidence 567799999999 67777665331 224588999999999999999999998 999999999999997665
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++...... .....+|+.|+|||++.+..++.++
T Consensus 135 ------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~ 178 (280)
T cd05608 135 ------------------------------------NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSV 178 (280)
T ss_pred ------------------------------------CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccc
Confidence 4999999998755322 2234688999999999999899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+||||+++|+|++|+.||....... ........ +.
T Consensus 179 DvwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~--------------------------------------~~ 214 (280)
T cd05608 179 DYFALGVTLYEMIAARGPFRARGEKV------ENKELKQR--------------------------------------IL 214 (280)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCcch------hHHHHHHh--------------------------------------hc
Confidence 99999999999999999997543211 00000000 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+++.+||+.||++|| |++++++||||++.
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 215 NDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred ccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 011112344667888999999999999999 88999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-41 Score=314.27 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=195.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+ .|++++++.+.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~hp~i~~~~~~~~- 65 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--------------RHPFLTALKYSFQ- 65 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCCCceEEEEE-
Confidence 36899999999999999999999999987532 1223456677788877 7899999988876
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeeccCCCCceEEeechhHHhHh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.+...++||||+ +++|...+... ..+++..+..++.||+.||+|||+ . |++||||||+||+++.++
T Consensus 66 ---~~~~~~lv~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~------ 133 (325)
T cd05594 66 ---THDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDG------ 133 (325)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCC------
Confidence 667899999999 67787776554 348899999999999999999997 6 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (325)
T cd05594 134 -------------------------------------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 176 (325)
T ss_pred -------------------------------------CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCc
Confidence 49999999886432 12234568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+. ......+.
T Consensus 177 ~DiwslG~il~el~tG~~Pf~~~~~------~~~~~~i~----------------------------------------- 209 (325)
T cd05594 177 VDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELIL----------------------------------------- 209 (325)
T ss_pred cccccccceeeeeccCCCCCCCCCH------HHHHHHHh-----------------------------------------
Confidence 9999999999999999999965431 11111110
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|++||..||.+|+ ++.++++||||.+.
T Consensus 210 -~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 210 -MEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred -cCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 011112344567788999999999999997 89999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=309.68 Aligned_cols=245 Identities=25% Similarity=0.364 Sum_probs=192.6
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.+..+++.||+|+++.... ..+....|..++... ..|++++++++.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------------~~hp~i~~~~~~~~- 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-------------WEHPFLTHLFCTFQ- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-------------cCCCCccceeeEEE-
Confidence 369999999999999999999999999875321 123334455555443 27899999998886
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+.+.++||||+ +++|...+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~------- 133 (316)
T cd05592 67 ---TKEHLFFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDG------- 133 (316)
T ss_pred ---cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCC-------
Confidence 567899999999 77888777654 3489999999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (316)
T cd05592 134 ------------------------------------HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESV 177 (316)
T ss_pred ------------------------------------CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcc
Confidence 49999999987542 122345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|+.||.+.+ .......+.. .
T Consensus 178 DvwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~---~------------------------------------- 211 (316)
T cd05592 178 DWWSFGVLLYEMLIGQSPFHGED------EDELFDSILN---D------------------------------------- 211 (316)
T ss_pred cchhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc---C-------------------------------------
Confidence 99999999999999999997544 1122221111 0
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH-HHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA-ADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell~hp~~~~~ 389 (393)
...++...+..+.++|.+||..||.+||++ .++++||||+..
T Consensus 212 --~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 212 --RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 011223345677899999999999999986 589999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0197|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=315.00 Aligned_cols=243 Identities=24% Similarity=0.344 Sum_probs=203.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
.+++++.||+|.||.||.|.... ...||+|.++......+.+.+|+.+|+.+ .|++++++++++.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L--------------~H~~lV~l~gV~~ 271 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKL--------------RHEKLVKLYGVCT 271 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhC--------------cccCeEEEEEEEe
Confidence 45678899999999999997753 34699999998777788999999999999 8999999999997
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
....++|||||+ .|+|++++.......++..+...++.||++|++||.++ ++|||||-++||||+.+.
T Consensus 272 ----~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~------ 340 (468)
T KOG0197|consen 272 ----KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDL------ 340 (468)
T ss_pred ----cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCc------
Confidence 444699999999 89999999886667799999999999999999999999 999999999999998876
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-CC---CCCCCCchhHHHhcCCCCc
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-DE---IQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-~~---~~t~~y~aPE~~~~~~~~~ 263 (393)
.+|++|||+++....... .. --+.-|.|||.+..+.++.
T Consensus 341 -------------------------------------~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~ 383 (468)
T KOG0197|consen 341 -------------------------------------VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSS 383 (468)
T ss_pred -------------------------------------eEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCccc
Confidence 599999999995443321 11 2256799999999999999
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
+||||||||+||||+| |+.|+...+. .+. +....+.+++
T Consensus 384 kSDVWSFGVlL~E~fT~G~~py~~msn------~ev---------------~~~le~GyRl------------------- 423 (468)
T KOG0197|consen 384 KSDVWSFGVLLWELFTYGRVPYPGMSN------EEV---------------LELLERGYRL------------------- 423 (468)
T ss_pred ccceeehhhhHHHHhccCCCCCCCCCH------HHH---------------HHHHhccCcC-------------------
Confidence 9999999999999999 9999976652 222 2222222222
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
+-|..+++.+.++|..||..+|++|||++.+.
T Consensus 424 -------p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 424 -------PRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred -------CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 23477889999999999999999999998664
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=308.64 Aligned_cols=245 Identities=22% Similarity=0.340 Sum_probs=193.6
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|++..+++.||+|+++... ........|..++... ..|++++++++.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------------~~hp~iv~~~~~~~- 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-------------WEHPFLTHLYCTFQ- 66 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-------------cCCCcCcceEEEEE-
Confidence 46899999999999999999999999987542 1223345566666543 17899999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..++..++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~------- 133 (316)
T cd05619 67 ---TKENLFFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDG------- 133 (316)
T ss_pred ---eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCC-------
Confidence 567899999999 78888887654 3488899999999999999999998 999999999999998766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||..|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (316)
T cd05619 134 ------------------------------------HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSV 177 (316)
T ss_pred ------------------------------------CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchh
Confidence 49999999886432 122345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+||+||++|+|++|..||.+.+ .......+.. ..
T Consensus 178 DvwslG~il~el~~G~~pf~~~~------~~~~~~~i~~-~~-------------------------------------- 212 (316)
T cd05619 178 DWWSFGVLLYEMLIGQSPFHGHD------EEELFQSIRM-DN-------------------------------------- 212 (316)
T ss_pred hhhhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh-CC--------------------------------------
Confidence 99999999999999999997543 1111111110 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHH-HHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAA-DCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-ell~hp~~~~~ 389 (393)
..++...+..+.++|.+||..||.+||++. ++++||||+.+
T Consensus 213 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 213 ---PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred ---CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 001223456778999999999999999996 99999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=310.57 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=196.3
Q ss_pred EEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 34 RKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.||+|+||.||+|++. .+++.||+|+++... .....+.+|+.+++.+ .|+||+++++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l--------------~hp~iv~~~~ 67 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV--------------KHPFIVDLIY 67 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC--------------CCCchhceee
Confidence 68999999999999864 468899999987532 2234567899999998 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .++..++||||+ +++|...+... ..+.+..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 68 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~--- 137 (323)
T cd05584 68 AFQ----TGGKLYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQG--- 137 (323)
T ss_pred EEe----cCCeEEEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC---
Confidence 887 567899999999 77888877654 3478889999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..... ......||+.|+|||++.+..+
T Consensus 138 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 177 (323)
T cd05584 138 ----------------------------------------HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGH 177 (323)
T ss_pred ----------------------------------------CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCC
Confidence 499999999864321 1223468999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|+.||...+ ....+..+.
T Consensus 178 ~~~~DiwslG~il~ell~G~~pf~~~~------~~~~~~~~~-------------------------------------- 213 (323)
T cd05584 178 GKAVDWWSLGALMYDMLTGAPPFTAEN------RKKTIDKIL-------------------------------------- 213 (323)
T ss_pred CCcceecccHHHHHHHhcCCCCCCCCC------HHHHHHHHH--------------------------------------
Confidence 999999999999999999999997544 111111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|++||..||++|| +++++++||||+..
T Consensus 214 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 214 ----KGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred ----cCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 111223344567788999999999999999 89999999999764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=309.49 Aligned_cols=245 Identities=25% Similarity=0.361 Sum_probs=196.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|+++... ........|..+++.+. .|++++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-------------~h~~i~~~~~~~~- 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-------------KHPFLTQLHSCFQ- 66 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-------------CCCCccceeeEEE-
Confidence 36999999999999999999999999987542 22344556777777662 6899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~------- 133 (318)
T cd05570 67 ---TKDRLFFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEG------- 133 (318)
T ss_pred ---cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCC-------
Confidence 567899999999 77888777654 3589999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......+|+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~ 177 (318)
T cd05570 134 ------------------------------------HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAV 177 (318)
T ss_pred ------------------------------------cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcch
Confidence 49999999886421 122334689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|+|||||++|+|++|+.||...+ .......+..
T Consensus 178 DiwslGvil~~l~~G~~pf~~~~------~~~~~~~i~~----------------------------------------- 210 (318)
T cd05570 178 DWWALGVLLYEMLAGQSPFEGDD------EDELFQSILE----------------------------------------- 210 (318)
T ss_pred hhhhHHHHHHHHhhCCCCCCCCC------HHHHHHHHHc-----------------------------------------
Confidence 99999999999999999996543 1111111110
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
....++...+..+.+||++||..||.+||++ .++++||||++.
T Consensus 211 -~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 211 -DEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred -CCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 0111223455678899999999999999999 999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=302.94 Aligned_cols=255 Identities=24% Similarity=0.367 Sum_probs=201.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|++.+.||+|+||.||+|.+..+++.||+|.+...... ...+.+|+.+++.+ .|++++++.
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV--------------NSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC--------------CCCCeeeee
Confidence 378889999999999999999999999999988643221 23456799999998 788899988
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+...++||||+ +++|.+.+.......+++.++..++.|++.||.|||+. +++|+||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~-- 139 (285)
T cd05630 67 YAYE----TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHG-- 139 (285)
T ss_pred EEEe----cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCC--
Confidence 8876 567899999999 77887777554444588999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..... ......|+..|+|||++.+..+
T Consensus 140 -----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 178 (285)
T cd05630 140 -----------------------------------------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 178 (285)
T ss_pred -----------------------------------------CEEEeeccceeecCCCccccCCCCCccccChHHHcCCCC
Confidence 499999998875432 2233468999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||+|+++|+|++|+.||....... .......... ..+
T Consensus 179 ~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~---~~~~~~~~~~---~~~------------------------------- 221 (285)
T cd05630 179 TFSPDWWALGCLLYEMIAGQSPFQQRKKKI---KREEVERLVK---EVQ------------------------------- 221 (285)
T ss_pred CCccccHHHHHHHHHHHhCCCCCCCCCccc---hHHHHHhhhh---hhh-------------------------------
Confidence 999999999999999999999997543211 0011111100 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
..++...+..+.+|+++||+.||++||| ++|+++||||+..
T Consensus 222 -------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 222 -------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred -------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 0112345567889999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=308.73 Aligned_cols=256 Identities=19% Similarity=0.304 Sum_probs=198.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|..+++.+ .|++++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG--------------DRRWITNL 66 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC--------------CCCCCCce
Confidence 47999999999999999999999999999999987422 2234567788888887 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .+.++++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+|||++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~- 139 (331)
T cd05597 67 HYAFQ----DENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNG- 139 (331)
T ss_pred EEEEe----cCCeEEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCC-
Confidence 88887 667899999999 888888886532 4588999999999999999999998 999999999999997766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++....... ....||+.|+|||++..
T Consensus 140 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05597 140 ------------------------------------------HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQA 177 (331)
T ss_pred ------------------------------------------CEEEEECCceeecCCCCCccccceeccccccCHHHHhh
Confidence 49999999986543221 12358999999999974
Q ss_pred -----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 -----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
..++.++|||||||++|+|++|+.||.+.+. ......+.......+
T Consensus 178 ~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~~----------------------- 228 (331)
T cd05597 178 MEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKEHFQ----------------------- 228 (331)
T ss_pred ccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCccc-----------------------
Confidence 3468899999999999999999999975441 122221111000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
........+..+.++|++||+.++.+ |++++++++||||++.
T Consensus 229 --------------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 229 --------------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred --------------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 00001224667889999998765544 7899999999999875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=307.86 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=199.1
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|+++... ...+.+.+|..+++.+. .|++++++.+++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-------------~~~~i~~~~~~~~- 66 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-------------SNPFLVGLHSCFQ- 66 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-------------CCCCEeeEEEEEE-
Confidence 36999999999999999999999999987542 22344667888887773 5889999998887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 67 ---~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~------- 133 (327)
T cd05617 67 ---TTSRLFLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADG------- 133 (327)
T ss_pred ---eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCC-------
Confidence 567899999999 77887777654 3489999999999999999999998 999999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++.... .......||+.|+|||++.+..++.++
T Consensus 134 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 177 (327)
T cd05617 134 ------------------------------------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177 (327)
T ss_pred ------------------------------------CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchh
Confidence 49999999886432 223345689999999999998899999
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 266 DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
|||||||++|+|++|..||..............+.... .
T Consensus 178 DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-----------------------------------------~ 216 (327)
T cd05617 178 DWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-----------------------------------------L 216 (327)
T ss_pred eeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH-----------------------------------------H
Confidence 99999999999999999996543322111111111111 1
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
.....++...+..+.++|.+||..||.+|++ ++++++||||+.+
T Consensus 217 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 217 EKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred hCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 1112233445677889999999999999998 4799999999875
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=306.39 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=198.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ........|..+++.+. .|++++++.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~i~~~~ 67 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-------------KPPFLTQLH 67 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-------------CCCchhhee
Confidence 4788999999999999999999999999999987532 12234566777777662 456677777
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. ....+++||||+ +++|...+... ..+++.++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 68 ~~~~----~~~~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~-- 138 (323)
T cd05615 68 SCFQ----TVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEG-- 138 (323)
T ss_pred eEEe----cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCC--
Confidence 7776 566799999999 78888877654 3489999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++..... ......||+.|+|||++.+..
T Consensus 139 -----------------------------------------~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 177 (323)
T cd05615 139 -----------------------------------------HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQP 177 (323)
T ss_pred -----------------------------------------CEEEeccccccccCCCCccccCccCCccccCHHHHcCCC
Confidence 499999998875321 122346899999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+|||||++|+|++|..||.+.+ .......+..
T Consensus 178 ~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~------------------------------------ 215 (323)
T cd05615 178 YGKSVDWWAYGVLLYEMLAGQPPFDGED------EDELFQSIME------------------------------------ 215 (323)
T ss_pred CCCccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence 9999999999999999999999997544 1222222211
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....++...+..+.+++.+||..||.+|++ .+++++||||+..
T Consensus 216 ------~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 216 ------HNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred ------CCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 111123345567889999999999999997 5799999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=314.32 Aligned_cols=255 Identities=22% Similarity=0.379 Sum_probs=200.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.-.++|++.+.||+|+||.||+|++..+++.+|+|++.... .....+.+|..+++.+ .|+++
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~--------------~hp~i 105 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--------------NSPWV 105 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC--------------CCCCC
Confidence 33479999999999999999999999999999999986422 1234466788888887 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .+.+.++||||+ +++|.+++... .+++..++.++.||+.||+|||++ ||+||||||+||+++.
T Consensus 106 v~~~~~~~----~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~ 177 (371)
T cd05622 106 VQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDK 177 (371)
T ss_pred CeEEEEEE----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECC
Confidence 99998887 677899999999 77888877553 388899999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++...... .....||+.|+|||+
T Consensus 178 ~~-------------------------------------------~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~ 214 (371)
T cd05622 178 SG-------------------------------------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 214 (371)
T ss_pred CC-------------------------------------------CEEEEeCCceeEcCcCCcccccCcccCccccCHHH
Confidence 66 4999999998765432 224568999999999
Q ss_pred HhcCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 256 LIGAG----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 256 ~~~~~----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
+.+.. ++.++|||||||++|+|++|..||.+.+ .......+.......+
T Consensus 215 l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~--------------------- 267 (371)
T cd05622 215 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNSLT--------------------- 267 (371)
T ss_pred HhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCccc---------------------
Confidence 97643 7889999999999999999999997544 2222222221111000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC---CcCHHHHhcCCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL---RASAADCLRHPWLNPR 389 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~---Rpt~~ell~hp~~~~~ 389 (393)
.+-....+..+.++|.+||. +|.+ |++++|+++||||++.
T Consensus 268 -----------------~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 268 -----------------FPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred -----------------CCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhcCcccCCC
Confidence 00012456778899999998 5444 7799999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=328.93 Aligned_cols=298 Identities=22% Similarity=0.341 Sum_probs=206.1
Q ss_pred ccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCC-ceEEE------------------EEEecccccchhhHHHHHH
Q psy12288 17 YCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDK-TFVAL------------------KIVKSDQVYADTARDEIVL 77 (393)
Q Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vai------------------K~~~~~~~~~~~~~~E~~~ 77 (393)
...+..++.+.++|+++++||+|+||.||+|...... ..+++ |.+.........+.+|+.+
T Consensus 137 ~~~~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~i 216 (501)
T PHA03210 137 QAKLKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILA 216 (501)
T ss_pred chhcccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHH
Confidence 3345666778889999999999999999998764332 11222 2122222233556789999
Q ss_pred HHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCC---CCCCHHHHHHHHHHHHH
Q psy12288 78 LKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY---KGIHIQNVRTIIKQVLE 154 (393)
Q Consensus 78 l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~---~~l~~~~~~~i~~ql~~ 154 (393)
++.+ .|+||+++++.+. .....+++++++++++..++..... .......++.++.||+.
T Consensus 217 l~~l--------------~HpnIv~l~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~ 278 (501)
T PHA03210 217 LGRL--------------NHENILKIEEILR----SEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLC 278 (501)
T ss_pred HHhC--------------CCCCcCcEeEEEE----ECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHH
Confidence 9998 8999999999887 5567899999998898887754321 12345678889999999
Q ss_pred HHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcc
Q psy12288 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234 (393)
Q Consensus 155 ~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~ 234 (393)
||+|||++ ||+||||||+|||++.++ .+||+|||++
T Consensus 279 aL~yLH~~-gIiHrDLKP~NILl~~~~-------------------------------------------~vkL~DFGla 314 (501)
T PHA03210 279 AVEYIHDK-KLIHRDIKLENIFLNCDG-------------------------------------------KIVLGDFGTA 314 (501)
T ss_pred HHHHHHhC-CeecCCCCHHHEEECCCC-------------------------------------------CEEEEeCCCc
Confidence 99999998 999999999999998766 4999999999
Q ss_pred ccccCC----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 235 CWIDDH----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 235 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
...... .....||..|+|||++.+..++.++|||||||++|+|++|..++...... ....++..+....+..+
T Consensus 315 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~ 391 (501)
T PHA03210 315 MPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG---KPGKQLLKIIDSLSVCD 391 (501)
T ss_pred eecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC---CHHHHHHHHHHhcccCh
Confidence 765432 22346899999999999999999999999999999999987654333221 13344555554444322
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.++.....+...+..... .. ..+......+.. ...+..+.++|.+||.+||.+|||+.|+|.||||.+.
T Consensus 392 ~~~p~~~~~~~~~i~~~~-~~----~~~~~~~~~~~~-----~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 392 EEFPDPPCKLFDYIDSAE-ID----HAGHSVPPLIRN-----LGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred hhcCCcHHHHHHHhhhhh-cc----cCccchhhHHHh-----cCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 222111111111110000 00 000001111111 1234567899999999999999999999999999864
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=295.89 Aligned_cols=252 Identities=30% Similarity=0.537 Sum_probs=201.4
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchh---hHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT---ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++++.||+|+||.||+|.+..+++.+|+|.+......... ..+|+.+++.+ .|++++++++.
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL--------------RHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH--------------TBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc--------------ccccccccccc
Confidence 89999999999999999999999999999999865433332 24589999999 78999999888
Q ss_pred ceeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++||++. ++|.+.+... ..++..++..++.|++.||++||++ +++|+||||+||+++.++
T Consensus 67 ~~----~~~~~~~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~---- 135 (260)
T PF00069_consen 67 FQ----DDNYLYIVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENG---- 135 (260)
T ss_dssp EE----ESSEEEEEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTS----
T ss_pred cc----cccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccccc----
Confidence 87 4777899999995 4888888733 3489999999999999999999998 999999999999998666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHh-cCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLI-GAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~-~~~~ 261 (393)
.++|+|||.+... ........++..|+|||++. +...
T Consensus 136 ---------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (260)
T PF00069_consen 136 ---------------------------------------EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKY 176 (260)
T ss_dssp ---------------------------------------EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSB
T ss_pred ---------------------------------------ccccccccccccccccccccccccccccccccccccccccc
Confidence 4899999998642 33344567899999999998 7778
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||.... .......+.........
T Consensus 177 ~~~~Di~slG~il~~l~~~~~p~~~~~------~~~~~~~~~~~~~~~~~------------------------------ 220 (260)
T PF00069_consen 177 TRKSDIWSLGIILYELLTGKLPFEESN------SDDQLEIIEKILKRPLP------------------------------ 220 (260)
T ss_dssp STHHHHHHHHHHHHHHHHSSSSSTTSS------HHHHHHHHHHHHHTHHH------------------------------
T ss_pred ccccccccccccccccccccccccccc------chhhhhhhhhccccccc------------------------------
Confidence 999999999999999999999997552 22222222222211000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
............+.++|.+||+.||++||++.++++||||
T Consensus 221 -----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 221 -----SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -----HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -----ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0000001223788999999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0589|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=310.77 Aligned_cols=252 Identities=26% Similarity=0.407 Sum_probs=217.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|.+++++|+|+||.+++++++..+..+++|.+... ........+|+.++..+ .||||+.+.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~--------------~hP~iv~y~ 69 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL--------------LHPNIVEYK 69 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc--------------cCCCeeeec
Confidence 5799999999999999999999999999999987643 23345678899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++|.. ++..++|+|+|| ||++.+.+.+.+..-++++.+..++.|++.|+.|||++ +|+|||||+.||+++.++
T Consensus 70 ds~~~---~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~-- 143 (426)
T KOG0589|consen 70 DSFEE---DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDK-- 143 (426)
T ss_pred cchhc---CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccC--
Confidence 99982 344599999999 89999999888766799999999999999999999988 999999999999998887
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||+|+.+... ....+||+.|++||.+.+.+
T Consensus 144 -----------------------------------------~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~p 182 (426)
T KOG0589|consen 144 -----------------------------------------KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIP 182 (426)
T ss_pred -----------------------------------------ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCC
Confidence 3899999999988654 34568999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|..++|||||||++|||++-+.+|.+.+ ....+..+....
T Consensus 183 Yn~KSDiWsLGC~~yEm~~lk~aF~a~~------m~~Li~ki~~~~---------------------------------- 222 (426)
T KOG0589|consen 183 YNEKSDIWSLGCCLYEMCTLKPAFKASN------MSELILKINRGL---------------------------------- 222 (426)
T ss_pred CCccCcchhhcchHHHHHhcccccCccc------hHHHHHHHhhcc----------------------------------
Confidence 9999999999999999999999998766 333333333322
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
..+.+..++.++..+|+.||..+|+.||++.++|.+|.+.
T Consensus 223 -------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 223 -------YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred -------CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 1235567889999999999999999999999999998765
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=302.06 Aligned_cols=282 Identities=26% Similarity=0.376 Sum_probs=211.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ......+|+.+++.+ .|++++++.
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~ 72 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL--------------RHPNIVELK 72 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC--------------CCCCCcceE
Confidence 589999999999999999999999999999998864322 123456799999998 788999988
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+.. ......++||||+++++.+++.... ..+++.++..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 73 ~~~~~--~~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~--- 145 (309)
T cd07845 73 EVVVG--KHLDSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKG--- 145 (309)
T ss_pred EEEec--CCCCeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC---
Confidence 88752 2335689999999888888876543 4589999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++|+|||.+...... .....++..|+|||.+.+. .
T Consensus 146 ----------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 185 (309)
T cd07845 146 ----------------------------------------CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTT 185 (309)
T ss_pred ----------------------------------------CEEECccceeeecCCccCCCCcccccccccChhhhcCCCC
Confidence 4999999998765432 2233457789999998764 5
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|++||...+ ..+.+..+....+..+...+......... ..... .....
T Consensus 186 ~~~~~DvwslG~il~el~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~- 252 (309)
T cd07845 186 YTTAIDMWAVGCILAELLAHKPLLPGKS------EIEQLDLIIQLLGTPNESIWPGFSDLPLV----GKFTL--PKQPY- 252 (309)
T ss_pred cCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChhhchhhhccccc----ccccc--cCCCC-
Confidence 7899999999999999999999997655 55666667666665544433221111000 00000 00000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....... ...+..+.++|.+||..||++|||++|+++||||++
T Consensus 253 --~~~~~~~---~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 253 --NNLKHKF---PWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred --CchHHhc---cccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0000000 123567789999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=313.86 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=195.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|+||+++++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 139 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV--------------NHPNVVKCHD 139 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC--------------CCCCcceeee
Confidence 57899999999999999999999999999999986432 2245678899999998 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+..+++||||+ +++|... ....+..+..++.||+.||+|||++ |++||||||+|||++.++
T Consensus 140 ~~~----~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~--- 205 (353)
T PLN00034 140 MFD----HNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAK--- 205 (353)
T ss_pred Eec----cCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCC---
Confidence 886 567799999999 5555432 2256778889999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC--
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-- 259 (393)
.++|+|||++...... .....||..|+|||.+...
T Consensus 206 ----------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 245 (353)
T PLN00034 206 ----------------------------------------NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLN 245 (353)
T ss_pred ----------------------------------------CEEEcccccceecccccccccccccCccccCccccccccc
Confidence 4999999998765432 2345789999999987532
Q ss_pred ---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 260 ---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 260 ---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..+.++|||||||++|+|++|+.||......+ ...+..... .+
T Consensus 246 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~----~~~~~~~~~-~~----------------------------- 291 (353)
T PLN00034 246 HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD----WASLMCAIC-MS----------------------------- 291 (353)
T ss_pred cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc----HHHHHHHHh-cc-----------------------------
Confidence 23568999999999999999999997322111 000000000 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+...+..+.+||.+||..||++|||+.|+++||||.+..
T Consensus 292 ----------~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 292 ----------QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred ----------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 00112234567889999999999999999999999999998863
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=298.62 Aligned_cols=278 Identities=30% Similarity=0.500 Sum_probs=214.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC--------------QHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC--------------CCCCCcceee
Confidence 5899999999999999999999999999999987532 2345678899999988 7899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++|||+++++|.+.+.... ..+++..++.++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~---- 136 (286)
T cd07832 67 VFP----HGSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADG---- 136 (286)
T ss_pred EEe----cCCeeEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCC----
Confidence 887 577899999999999988876543 4589999999999999999999998 999999999999998765
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC-
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~- 260 (393)
.++|+|||.+...... .....++..|+|||.+.+..
T Consensus 137 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 177 (286)
T cd07832 137 ---------------------------------------VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARK 177 (286)
T ss_pred ---------------------------------------cEEEeeeeecccccCCCCCccccccCcccccCceeeecccc
Confidence 4999999988765432 23456788999999987654
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++||||+|+++|+|++|.+||.+.. ....+..+....+......+......... ............
T Consensus 178 ~~~~~Di~slG~~l~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 246 (286)
T cd07832 178 YDPGVDLWAVGCIFAELLNGSPLFPGEN------DIEQLAIVFRTLGTPNEETWPGLTSLPDY-----NKITFPESKPIP 246 (286)
T ss_pred CCchhHHHHHHHHHHHHHcCCcCcCCCC------HHHHHHHHHHHcCCCChHHHhhccCcchh-----hcccCCCCCcch
Confidence 5899999999999999999988887654 44556666666665544433322111110 000000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
+.. ...+.+..+.++|.+||..||++|||++++++||||.
T Consensus 247 ----~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 247 ----LEE---IFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ----HHH---hCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 111 1123457889999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=297.90 Aligned_cols=281 Identities=28% Similarity=0.462 Sum_probs=211.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+..... ....+.+|+.+++.+ .|+|++++.+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 70 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL--------------KHANIVTLHD 70 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC--------------CCcceeeEEE
Confidence 589999999999999999999999999999998864322 234456899999999 8899999998
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++||||++++|.+.+.... ..++...++.++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~---- 140 (291)
T cd07844 71 IIH----TKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERG---- 140 (291)
T ss_pred EEe----cCCeEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCC----
Confidence 876 667899999999889988876543 3588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-CCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG-AGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+ ..+
T Consensus 141 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 181 (291)
T cd07844 141 ---------------------------------------ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEY 181 (291)
T ss_pred ---------------------------------------CEEECccccccccCCCCccccccccccccCCcHHhhcCccc
Confidence 4999999988654321 122346788999999876 457
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||+|+++|+|++|+.||..... ..+.+..+.+..+......+........+....... .....
T Consensus 182 ~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 250 (291)
T cd07844 182 STSLDMWGVGCIFYEMATGRPLFPGSTD-----VEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPF-----YPPRP- 250 (291)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCcc-----HHHHHHHHHHhcCCCChhhhhhhhhccccccccccc-----cCChh-
Confidence 8999999999999999999999965431 345566666666665544433322211111110000 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .......+.+++.+||+.||.+|||+.++++||||
T Consensus 251 ---~~~~~~-~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 251 ---LINHAP-RLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ---HHHhCc-CCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000000 00112577899999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=307.74 Aligned_cols=287 Identities=25% Similarity=0.454 Sum_probs=221.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+++|++.+.||+|++|.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF--------------KHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc--------------CCCCccCH
Confidence 468999999999999999999999999999999887532 2345567899999998 78999999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+.+..........++||||+++++...+... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~-- 144 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDC-- 144 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCC--
Confidence 98887554456689999999988888887654 3489999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||.+...... .....++..|+|||.+
T Consensus 145 -----------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~ 183 (334)
T cd07855 145 -----------------------------------------ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL 183 (334)
T ss_pred -----------------------------------------cEEecccccceeecccCcCCCcccccccccccccChHHh
Confidence 4999999988654321 1234678899999998
Q ss_pred hc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc-ccccCCCCCeeecc
Q psy12288 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT-LRYFTPQGNFRRID 334 (393)
Q Consensus 257 ~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 334 (393)
.+ ..++.++|+||||+++|+|++|+.||.+.+ ....+..+....|..|.......... ...... ......
T Consensus 184 ~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~ 255 (334)
T cd07855 184 LSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN------YVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ--NLPRKQ 255 (334)
T ss_pred cCCcccccccchHHHHHHHHHHHcCCCccCCCC------hHHHHHHHHHHhCCChhHhhhhhchhhHHHHHh--hcccCC
Confidence 76 357899999999999999999999997655 45667777788887777665432211 000000 000000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. .++ ..+....+..+.++|++||..||.+|||+++++.||||.....
T Consensus 256 ~-~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 256 P-VPW---------SKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred C-CCH---------HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 0 000 0011234678999999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=298.44 Aligned_cols=279 Identities=30% Similarity=0.461 Sum_probs=211.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc------chhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY------ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+...... ...+..|+.+++.+ .|+|+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~ 66 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL--------------KHPNIIG 66 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc--------------CCCCChh
Confidence 589999999999999999999999999999998754322 23456788888888 7999999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++.+. .....++||||++++|.+.+.... ..+++..+..++.||++||+|||++ |++|+||+|+||+++.++
T Consensus 67 ~~~~~~----~~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~- 139 (298)
T cd07841 67 LLDVFG----HKSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDG- 139 (298)
T ss_pred hhheee----cCCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCC-
Confidence 999887 567899999999888888886643 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~- 258 (393)
.++|+|||++...... .....++..|+|||.+.+
T Consensus 140 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 177 (298)
T cd07841 140 ------------------------------------------VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA 177 (298)
T ss_pred ------------------------------------------CEEEccceeeeeccCCCccccccccceeeeCHHHHhCC
Confidence 4999999998765432 223356788999999865
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+|||||++|+|++|.+||...+ ..+.+..+....+......+............ .....
T Consensus 178 ~~~~~~~Dv~slG~il~e~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 244 (298)
T cd07841 178 RHYGVGVDMWSVGCIFAELLLRVPFLPGDS------DIDQLGKIFEALGTPTEENWPGVTSLPDYVEF-------KPFPP 244 (298)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCccccCCc------cHHHHHHHHHHcCCCchhhhhhcccccccccc-------cccCC
Confidence 357899999999999999999988887554 33445555555554433333221111100000 00000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
... .......+..+.++|.+||..||.+|||+.|+++||||++.-
T Consensus 245 ~~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 245 TPL-------KQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred cch-------hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 000 001123467888999999999999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG1989|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-40 Score=320.90 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=203.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe-cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+++|.++|.+|||+.||+|++...+..||+|++- .+......+.+|+++|+.|+ +|+|||.+++.
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-------------gh~nIV~yids 103 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-------------GHKNIVSYIDS 103 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-------------CCCceeeEecc
Confidence 59999999999999999999999888999999764 45555677899999999994 79999999995
Q ss_pred ceeec--CC-CeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEeec
Q psy12288 107 FKIYS--RN-GTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMCVD 180 (393)
Q Consensus 107 ~~~~~--~~-~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~~~ 180 (393)
..... .+ .-.+.|.|||| +++|.+++..+...+|++.++++|+.|++.|+++||.. . |+|||||.+|||++.+
T Consensus 104 s~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~ 182 (738)
T KOG1989|consen 104 SAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSAD 182 (738)
T ss_pred ccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCC
Confidence 44332 22 24688999999 58999999877767799999999999999999999975 7 9999999999999888
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------------CCCCCCCC
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------FADEIQTR 248 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------~~~~~~t~ 248 (393)
+ ..||||||.+...... ......|+
T Consensus 183 g-------------------------------------------~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp 219 (738)
T KOG1989|consen 183 G-------------------------------------------NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTP 219 (738)
T ss_pred C-------------------------------------------CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCc
Confidence 7 4999999988643211 12235699
Q ss_pred CCchhHHHh---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 249 QYRSVEVLI---GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 249 ~y~aPE~~~---~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
.|++||.+. +.+.+.++|||+|||+||.|+....||.....-
T Consensus 220 ~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----------------------------------- 264 (738)
T KOG1989|consen 220 QYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----------------------------------- 264 (738)
T ss_pred cccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-----------------------------------
Confidence 999999975 567899999999999999999999999643211
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.|+..++.+| ..++..+.+||+.||..||.+||++-|++.+
T Consensus 265 -----------------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 265 -----------------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred -----------------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 2223333344 3688999999999999999999999988764
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=310.26 Aligned_cols=244 Identities=22% Similarity=0.311 Sum_probs=191.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|.+..+++.||+|++..... ....+..|.. +++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l--------------~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV--------------KHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC--------------CCCCCCCeeEEEE
Confidence 368999999999999999999999999875321 1122333433 34455 7999999988886
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|...+... ..+++..+..++.||+.||+|||++ |++||||||+|||++.++
T Consensus 67 ----~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~------ 133 (323)
T cd05575 67 ----TADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQG------ 133 (323)
T ss_pred ----eCCEEEEEEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCC------
Confidence 567899999999 77888877654 3488999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (323)
T cd05575 134 -------------------------------------HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRT 176 (323)
T ss_pred -------------------------------------cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCcc
Confidence 49999999886432 12234468999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+. ......+..
T Consensus 177 ~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i~~---------------------------------------- 210 (323)
T cd05575 177 VDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDNILN---------------------------------------- 210 (323)
T ss_pred ccccccchhhhhhhcCCCCCCCCCH------HHHHHHHHc----------------------------------------
Confidence 9999999999999999999975431 111111110
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||..||.+||++ .++++||||++.
T Consensus 211 --~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 211 --KPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred --CCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 1111223446778899999999999999987 699999999874
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=297.87 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=201.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|++.+.||+|+||.||+|.+..+++.+|+|.+..... ....+.+|+.+++.+ .|++++++.
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~~~~i~~~~ 66 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV--------------NSQFVVNLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc--------------CCcCceeEE
Confidence 37888999999999999999999999999998865321 123457799999998 788888888
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .++..+++|||+ ++++...+.......+++..+..++.|++.||.|||+. |++||||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~-- 139 (285)
T cd05632 67 YAYE----TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYG-- 139 (285)
T ss_pred EEEe----cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCC--
Confidence 7776 567899999999 67777776554434589999999999999999999998 999999999999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..... ......++..|+|||.+.+..+
T Consensus 140 -----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~ 178 (285)
T cd05632 140 -----------------------------------------HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRY 178 (285)
T ss_pred -----------------------------------------CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCC
Confidence 499999998865432 2234568999999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||..... ......+.....
T Consensus 179 ~~~~Di~slG~~l~~l~~g~~P~~~~~~------~~~~~~~~~~~~---------------------------------- 218 (285)
T cd05632 179 TLSPDYWGLGCLIYEMIEGQSPFRGRKE------KVKREEVDRRVL---------------------------------- 218 (285)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhhh----------------------------------
Confidence 9999999999999999999999975431 111111111000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
.....++...+..+.+|+.+||..||++||+ +.++++||||+..
T Consensus 219 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 219 ----ETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ----ccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 0001122344567789999999999999999 8999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=298.40 Aligned_cols=283 Identities=27% Similarity=0.401 Sum_probs=214.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|+++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM--------------QHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc--------------cCCCEeeEE
Confidence 47999999999999999999999999999999876432 2235677899999998 889999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+.+.++||||+++++.+.+.......++...+..++.||+.||+|||++ +++|+||+|+||+++.++.
T Consensus 68 ~~~~----~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~-- 140 (294)
T PLN00009 68 DVVH----SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTN-- 140 (294)
T ss_pred EEEe----cCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCC--
Confidence 9887 66789999999988998888765544467888889999999999999998 9999999999999975432
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++++|||++...... .....+++.|+|||.+.+. .
T Consensus 141 ----------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 180 (294)
T PLN00009 141 ----------------------------------------ALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRH 180 (294)
T ss_pred ----------------------------------------EEEEcccccccccCCCccccccCceeecccCHHHHhCCCC
Confidence 4899999998754322 2234567899999998764 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|..||.... ..+.+..+....+..+...+........+... .......
T Consensus 181 ~~~~~Dv~slG~i~~~l~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 247 (294)
T PLN00009 181 YSTPVDIWSVGCIFAEMVNQKPLFPGDS------EIDELFKIFRILGTPNEETWPGVTSLPDYKSA-------FPKWPPK 247 (294)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhccccccchhhhhh-------cccCCCC
Confidence 7899999999999999999999997654 34455555565555444333211111000000 0000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. . .......+..+.+++.+||+.||++||++.++++||||++..
T Consensus 248 ~---~---~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 248 D---L---ATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred C---H---HHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 0 0 001123466788999999999999999999999999998764
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=305.63 Aligned_cols=287 Identities=25% Similarity=0.384 Sum_probs=213.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++++|++.++||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|++++
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~ 68 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF--------------KHENIIGI 68 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC--------------CCCCcCch
Confidence 456999999999999999999999999999999988632 22335567799999998 78889898
Q ss_pred cccceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+..... .....++++|++++++...+... .+++..+..++.|++.||++||++ |++||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~- 143 (336)
T cd07849 69 LDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNC- 143 (336)
T ss_pred hheeecccccccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCC-
Confidence 887653221 33468999999988888877543 489999999999999999999998 999999999999997766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++...... .....+|..|+|||.+
T Consensus 144 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 181 (336)
T cd07849 144 ------------------------------------------DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM 181 (336)
T ss_pred ------------------------------------------CEEECcccceeeccccccccCCcCCcCcCCCccChHHh
Confidence 4999999988754321 1234678899999997
Q ss_pred hc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+ ..++.++|+|||||++|+|++|+.||.... .......+....+..+.+........... +.....+.
T Consensus 182 ~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 251 (336)
T cd07849 182 LNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD------YLHQLNLILGVLGTPSQEDLNCIISLRAR----NYIKSLPF 251 (336)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHHhhchhhh----hHHhhcCc
Confidence 65 457899999999999999999999997544 44556666666666555443321110000 00000000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..... ........+..+.++|.+||+.||++|||+.|+++||||+...
T Consensus 252 ~~~~~-------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 252 KPKVP-------WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred CCccc-------HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00000 0000123467789999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=319.37 Aligned_cols=259 Identities=22% Similarity=0.278 Sum_probs=203.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...+|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+|+.++..+ .|+++++
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~--------------~h~~iv~ 95 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC--------------DFFSIVK 95 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC--------------CCCcEEE
Confidence 35799999999999999999999999999999999865422 234456788888777 7888888
Q ss_pred ccccceeecC----CCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 103 LLNDFKIYSR----NGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 103 ~~~~~~~~~~----~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
+...+..... ....+++||||+ +++|.+.+... ....+++..+..++.|++.||.|||++ +++||||||+||
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NI 174 (496)
T PTZ00283 96 CHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANI 174 (496)
T ss_pred eecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHE
Confidence 8776653322 122578999999 78998887543 224588999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQY 250 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y 250 (393)
+++.++ .++|+|||+++..... .....||+.|
T Consensus 175 Ll~~~~-------------------------------------------~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y 211 (496)
T PTZ00283 175 LLCSNG-------------------------------------------LVKLGDFGFSKMYAATVSDDVGRTFCGTPYY 211 (496)
T ss_pred EEeCCC-------------------------------------------CEEEEecccCeeccccccccccccccCCcce
Confidence 998766 4999999998755322 2345689999
Q ss_pred chhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 251 RSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 251 ~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
+|||++.+..++.++|||||||++|+|++|+.||...+ ....+..+.. +.
T Consensus 212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~~--~~---------------------- 261 (496)
T PTZ00283 212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTLA--GR---------------------- 261 (496)
T ss_pred eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhc--CC----------------------
Confidence 99999999889999999999999999999999996543 1111111110 10
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+++...+..+.+++.+||..||.+||++.++++|||++..
T Consensus 262 -----------------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 262 -----------------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred -----------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 001234456788999999999999999999999999998753
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=293.21 Aligned_cols=279 Identities=28% Similarity=0.456 Sum_probs=206.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|+++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL--------------KHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC--------------CCCCEeeee
Confidence 47999999999999999999999999999999886432 2234567899999998 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++||||+.+++++.+.... ..+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 67 ~~~~----~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~--- 137 (286)
T cd07847 67 EVFR----RKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQG--- 137 (286)
T ss_pred eEEe----eCCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCC---
Confidence 9887 566799999999776666665433 3589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhc-CC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIG-AG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~-~~ 260 (393)
.++|+|||++....... ....++..|+|||.+.+ ..
T Consensus 138 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 177 (286)
T cd07847 138 ----------------------------------------QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQ 177 (286)
T ss_pred ----------------------------------------cEEECccccceecCCCcccccCcccccccCCHHHHhCCCC
Confidence 49999999987654322 23457889999999876 44
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|++||.+.+ ..+.+..+....+......... +.............+..
T Consensus 178 ~~~~~Di~slG~i~~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 244 (286)
T cd07847 178 YGPPVDVWAIGCVFAELLTGQPLWPGKS------DVDQLYLIRKTLGDLIPRHQQI-------FSTNQFFKGLSIPEPET 244 (286)
T ss_pred cCchhhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhh-------cccccccccccCCCccc
Confidence 7889999999999999999999997655 3344444444444432211110 00000000000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... ... .....+..+.+|+.+||..||++|||+.|++.||||
T Consensus 245 ~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 245 REP-LES---KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccC-HHH---HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 000 000 012346788899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=297.55 Aligned_cols=249 Identities=22% Similarity=0.311 Sum_probs=194.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+++...+++.+|+|.+..+.. .......|+.+++.+ .|+|++++.+.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l--------------~hp~i~~~~~~~~--- 63 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV--------------NSPFIVNLAYAFE--- 63 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc--------------CCCcEEEEEEEEe---
Confidence 6999999999999999999999998864321 123345688999988 8899999988886
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+.+.++||||+ +++|...+.......++...+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~--------- 132 (277)
T cd05607 64 -SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQG--------- 132 (277)
T ss_pred -cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCC---------
Confidence 677899999999 77887777655445588899999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++...... .....++..|+|||++.+..++.++|+|
T Consensus 133 ----------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 178 (277)
T cd05607 133 ----------------------------------NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWF 178 (277)
T ss_pred ----------------------------------CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHH
Confidence 4899999988765432 2234678999999999988899999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
||||++|+|++|+.||........ ......... .+.++
T Consensus 179 slGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~--~~~~~-------------------------------------- 216 (277)
T cd05607 179 AMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTL--EDEVK-------------------------------------- 216 (277)
T ss_pred HHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhh--ccccc--------------------------------------
Confidence 999999999999999965432110 000000000 00000
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
......+..+.++|.+||..||++||++ ++++.||||+.+
T Consensus 217 -~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 217 -FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred -cccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 0012345678899999999999999999 778899999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=329.62 Aligned_cols=281 Identities=22% Similarity=0.364 Sum_probs=209.3
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..|+.+.++|+++++||+|+||.||+|.+..++..||+|.+.... .....+..|+.+++.+ .|
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L--------------~H 71 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL--------------KH 71 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc--------------CC
Confidence 346677789999999999999999999999999999999887432 2345678899999999 89
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcC------Ceeec
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQC------RIIHT 168 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~------~i~H~ 168 (393)
+||+++++.|... ....+++||||+ +++|.+++... ....+++..++.|+.||+.||+|||... +|+|+
T Consensus 72 PNIVrl~d~f~de--~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHR 149 (1021)
T PTZ00266 72 KNIVRYIDRFLNK--ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR 149 (1021)
T ss_pred CCcCeEEEEEEec--CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceec
Confidence 9999999887532 456799999999 77888887642 1245899999999999999999999841 49999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~ 246 (393)
||||+|||++.+......+ .....+......++|+|||++...... .....+
T Consensus 150 DLKPeNILL~s~~~~lg~i--------------------------~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vG 203 (1021)
T PTZ00266 150 DLKPQNIFLSTGIRHIGKI--------------------------TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVG 203 (1021)
T ss_pred cCcHHHeEeecCccccccc--------------------------cccccccCCCCceEEccCCccccccccccccccCC
Confidence 9999999997543100000 000000111235899999998765422 234468
Q ss_pred CCCCchhHHHhcC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 247 TRQYRSVEVLIGA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 247 t~~y~aPE~~~~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
|+.|+|||++.+. .++.++|||||||++|+|++|..||.... ....+.........+|
T Consensus 204 Tp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~------~~~qli~~lk~~p~lp-------------- 263 (1021)
T PTZ00266 204 TPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN------NFSQLISELKRGPDLP-------------- 263 (1021)
T ss_pred CccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC------cHHHHHHHHhcCCCCC--------------
Confidence 9999999999653 47899999999999999999999996443 1111111111000000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+..+.+||.+||..+|.+||++.|+|.||||+...
T Consensus 264 ---------------------------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 264 ---------------------------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred ---------------------------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 023456788999999999999999999999999998664
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=295.35 Aligned_cols=277 Identities=29% Similarity=0.491 Sum_probs=211.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|++|.||+|.+..+++.||||.+..+. .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--------------NHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc--------------CCCCCcchhh
Confidence 4899999999999999999999999999999886432 1234678899999999 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. ++...++||||+.+++...+.......+++..+..++.|++.||+|||+. +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~---- 137 (284)
T cd07860 67 VIH----TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG---- 137 (284)
T ss_pred hcc----cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 886 66789999999988888888765556689999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-C
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG-Y 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~-~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+.. +
T Consensus 138 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 178 (284)
T cd07860 138 ---------------------------------------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 178 (284)
T ss_pred ---------------------------------------CEEEeeccchhhcccCccccccccccccccCCeEEecCCCC
Confidence 4999999988755432 22345678899999887654 5
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||...+ ....+..+....+..+...+........... . ...+.
T Consensus 179 ~~~~Dv~slG~il~~l~tg~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~- 242 (284)
T cd07860 179 STAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP------S---FPKWA- 242 (284)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhhhhHHHHHHh------h---ccccc-
Confidence 889999999999999999999997654 4455556666666554433221110000000 0 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .....+..+.++|.+||..||.+|||++++++||||
T Consensus 243 ~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 243 RQDFSK---VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ccCHHH---HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000000 112345677899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=295.84 Aligned_cols=283 Identities=28% Similarity=0.438 Sum_probs=208.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+. .|+|+++++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~-------------~~~~i~~~~ 67 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-------------ESIYIVRLL 67 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc-------------CCCCcccee
Confidence 47999999999999999999999999999999876432 22356778999999983 468899999
Q ss_pred ccceeecC-CCeEEEEEEeeccccHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee-
Q psy12288 105 NDFKIYSR-NGTHICMVFEVMGYNLLRLIARSD---YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV- 179 (393)
Q Consensus 105 ~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~---~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~- 179 (393)
+.+..... .....+++|||+.+++.+++.... ...+++..++.++.||+.||.|||++ |++|+||+|+||+++.
T Consensus 68 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 68 DVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecC
Confidence 88875443 233589999999888888876532 23578999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .++|+|||.+...... .....+++.|+|||.+
T Consensus 147 ~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~ 183 (295)
T cd07837 147 KG-------------------------------------------LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVL 183 (295)
T ss_pred CC-------------------------------------------eEEEeecccceecCCCccccCCcccccCCCChHHh
Confidence 33 5999999988754322 2233567889999998
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+. .++.++|+||||+++|+|++|..||.+.+ ....+..+....+..+...+........... .
T Consensus 184 ~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-- 248 (295)
T cd07837 184 LGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS------ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE-------F-- 248 (295)
T ss_pred hCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHHhCCCChhhCcchhhccchhh-------c--
Confidence 764 46899999999999999999999997654 3444445555444433322211111000000 0
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
..+. ..... ......+..+.+||.+||..||.+||++.|++.||||+
T Consensus 249 -~~~~-~~~~~---~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 249 -PQWK-PQDLS---RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred -Cccc-chhHH---HhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 0000 00000 01123567788999999999999999999999999995
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=300.25 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=203.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..+++.+|+|.+..... ....+..|+.+++.+ .|++++++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~ 66 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL--------------DHPFLPTL 66 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC--------------CCCCchhh
Confidence 479999999999999999999999999999998875432 234567889999988 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+...++|||++ +++|.+.+.......+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~- 140 (316)
T cd05574 67 YASFQ----TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESG- 140 (316)
T ss_pred eeeee----cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCC-
Confidence 88876 667899999999 77888887765445689999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------------- 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------------- 240 (393)
.++|+|||++......
T Consensus 141 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
T cd05574 141 ------------------------------------------HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPS 178 (316)
T ss_pred ------------------------------------------CEEEeecchhhcccccccccccccccccccccccccch
Confidence 4899999987543211
Q ss_pred ----------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 241 ----------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 241 ----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
.....||..|+|||++.+..++.++||||||+++|+|++|+.||...+. ...+..+.......
T Consensus 179 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~- 251 (316)
T cd05574 179 ETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR------DETFSNILKKEVTF- 251 (316)
T ss_pred hhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch------HHHHHHHhcCCccC-
Confidence 1123578889999999988899999999999999999999999975442 11111111100000
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC----HHHHhcCCCC
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS----AADCLRHPWL 386 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~ 386 (393)
......+..+.++|.+||..||++||| ++|+++||||
T Consensus 252 ---------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 252 ---------------------------------------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred ---------------------------------------CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence 001124678899999999999999999 9999999999
Q ss_pred CCC
Q psy12288 387 NPR 389 (393)
Q Consensus 387 ~~~ 389 (393)
++.
T Consensus 293 ~~~ 295 (316)
T cd05574 293 RGV 295 (316)
T ss_pred hcC
Confidence 875
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=308.58 Aligned_cols=244 Identities=23% Similarity=0.366 Sum_probs=196.7
Q ss_pred EEecccCceEEEEEEeC---CCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 34 RKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+.||+|+||.||++++. .+++.||+|++.... ........|+.+++.+ .|+||+++++.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~~~ 67 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV--------------NHPFIVKLHYAF 67 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC--------------CCCCcccEEEEE
Confidence 67999999999999764 568899999987532 1234456788899888 899999999888
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 68 ~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~----- 135 (318)
T cd05582 68 Q----TEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEG----- 135 (318)
T ss_pred E----cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCC-----
Confidence 7 567899999999 78888887654 3489999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....||+.|+|||.+.+..++.
T Consensus 136 --------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~ 177 (318)
T cd05582 136 --------------------------------------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 177 (318)
T ss_pred --------------------------------------cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCC
Confidence 4999999998754322 23446899999999999888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|||||||++|+|++|+.||...+ .......+..
T Consensus 178 ~~DiwslG~il~el~tg~~p~~~~~------~~~~~~~i~~--------------------------------------- 212 (318)
T cd05582 178 SADWWSFGVLMFEMLTGSLPFQGKD------RKETMTMILK--------------------------------------- 212 (318)
T ss_pred ccceeccceEeeeeccCCCCCCCCC------HHHHHHHHHc---------------------------------------
Confidence 9999999999999999999997543 1222222111
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||+.||++||+ +.+++.||||...
T Consensus 213 ---~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 213 ---AKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 111223345677889999999999999999 7789999999864
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=298.82 Aligned_cols=283 Identities=27% Similarity=0.447 Sum_probs=211.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|+||.||+|.+..+++.||+|.+.... .......+|+.+++.+ .|++++++++
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~ 78 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL--------------KHENVVNLIE 78 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC--------------CCCCccceEE
Confidence 7999999999999999999999999999999876432 1223456799999998 7888888888
Q ss_pred cceeec----CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 106 DFKIYS----RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 106 ~~~~~~----~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
.+.... ......++||||+++++.+.+.... ..+++.++..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~ 156 (310)
T cd07865 79 ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDG 156 (310)
T ss_pred EEecccccccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCC
Confidence 765332 1245679999999888888876543 3589999999999999999999998 999999999999997766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-------CCCCCCCCCchhH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-------ADEIQTRQYRSVE 254 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~t~~y~aPE 254 (393)
.++|+|||++....... ....++..|+|||
T Consensus 157 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 193 (310)
T cd07865 157 -------------------------------------------ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPE 193 (310)
T ss_pred -------------------------------------------cEEECcCCCcccccCCcccCCCCccCcccCccccCcH
Confidence 49999999987553221 2235678899999
Q ss_pred HHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+.. ++.++|+||||+++|+|++|..||...+ ....+..+....|.+|.......... ..+... ..
T Consensus 194 ~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~ 262 (310)
T cd07865 194 LLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT------EQHQLTLISQLCGSITPEVWPGVDKL-ELFKKM----EL 262 (310)
T ss_pred HhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhcccccch-hhhhhc----cC
Confidence 987654 6889999999999999999999997655 45566677777787777654433211 111000 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..... ....... .+...+..+.++|.+||..||.+|||++|+++||||
T Consensus 263 ~~~~~----~~~~~~l-~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 263 PQGQK----RKVKERL-KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCccc----hhhHHhc-ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 00000 0000000 001134567899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=298.23 Aligned_cols=297 Identities=28% Similarity=0.413 Sum_probs=213.8
Q ss_pred eEEEEEEecccCceEEEEEEeCC--CCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|++.++||+|++|.||+|.+.. ++..||+|.+.... ...+...+|+.+++.+ .|+|+++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 66 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL--------------KHENVVS 66 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc--------------CCCCccc
Confidence 58999999999999999999988 78999999987532 2345667899999998 8899999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD---YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~---~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+.+.+.. ..+..+++|||++++++...+.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.
T Consensus 67 ~~~~~~~--~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~ 143 (316)
T cd07842 67 LVEVFLE--HADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMG 143 (316)
T ss_pred eEEEEeC--CCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcC
Confidence 9998872 2336899999999888887764322 22578999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSV 253 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aP 253 (393)
++. ....++|+|||++....... ....++..|+||
T Consensus 144 ~~~---------------------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 184 (316)
T cd07842 144 EGP---------------------------------------ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP 184 (316)
T ss_pred CCC---------------------------------------ccceEEECCCccccccCCCcccccccCCccccccccCH
Confidence 321 01259999999887653321 223568889999
Q ss_pred HHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC---CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 254 EVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKE---YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 254 E~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|.+.+. .++.++|+||||+++++|++|+.||....... .......+..+...++..+...+........+......
T Consensus 185 E~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (316)
T cd07842 185 ELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKD 264 (316)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhh
Confidence 998774 47899999999999999999999997655432 11123455566666665544433322222111110000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
... . ..+. .......+.....+..+.+++.+||..||++|||+.|+++||||
T Consensus 265 ~~~-~-~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 265 FKT-K-TYPS---NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred ccC-C-CCCC---ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0 0000 00111111112456788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=306.94 Aligned_cols=288 Identities=20% Similarity=0.270 Sum_probs=199.2
Q ss_pred EEEEeccc--CceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 32 VIRKLGWG--HFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 32 ~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+.++||+| +|+.||++.+..+++.||+|.+.... .....+.+|+.+++.+ .|+||+++++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF--------------NHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc--------------CCCCeeeEEEE
Confidence 56789999 67899999999999999999987532 2234567899999998 89999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .++..++||||+ ++++.+++.......+++..++.++.|++.||+|||++ +++||||||+||+++.++
T Consensus 68 ~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~---- 138 (327)
T cd08227 68 FI----ADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDG---- 138 (327)
T ss_pred EE----ECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCC----
Confidence 87 566799999999 67888887654444588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------CCCCCCCCCCCchhHH
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----------HFADEIQTRQYRSVEV 255 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----------~~~~~~~t~~y~aPE~ 255 (393)
.++++||+.+..... ......++..|+|||+
T Consensus 139 ---------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 179 (327)
T cd08227 139 ---------------------------------------KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEV 179 (327)
T ss_pred ---------------------------------------cEEEcccchhhccccccccccccccccccccceecccChHH
Confidence 377888875432211 1112345778999999
Q ss_pred Hhc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc-------CcccccccCC
Q psy12288 256 LIG--AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ-------GKKTLRYFTP 326 (393)
Q Consensus 256 ~~~--~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~-------~~~~~~~~~~ 326 (393)
+.+ ..++.++|||||||++|+|++|+.||...... .. ......+..|...... .....+....
T Consensus 180 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (327)
T cd08227 180 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT------QM--LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGAN 251 (327)
T ss_pred hhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh------HH--HHHHhcCCccccccccchhhhhcccCCcccCCc
Confidence 986 35889999999999999999999999754321 11 1111222222110000 0000000000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.+ ....................+.....+..+.+||++||..||++|||++|+++||||+.++
T Consensus 252 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 252 SG-LGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred CC-CCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00 0000000000000000011112334567899999999999999999999999999998865
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG4279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=313.59 Aligned_cols=259 Identities=27% Similarity=0.426 Sum_probs=210.9
Q ss_pred CeeCCeEEE-----EEEecccCceEEEEEEeCCCCceEEEEEEe-cccccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 24 DLFNFRYHV-----IRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 24 ~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
+.+..+|+. .-+||+|+||.||.|++..|+..+|||-+. +.....+-++.|+.+.+.+ .|
T Consensus 566 e~iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L--------------rH 631 (1226)
T KOG4279|consen 566 EKIEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL--------------RH 631 (1226)
T ss_pred cceEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH--------------hh
Confidence 345555553 348999999999999999999999999775 4455567789999999999 88
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGI--HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l--~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.||++.++++. .++++-|.||.. ||+|.+++ +..|+++ ++.++..+..||++||.|||++ .|||||||-+|
T Consensus 632 kNIVrYLGs~s----enGf~kIFMEqVPGGSLSsLL-rskWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDN 705 (1226)
T KOG4279|consen 632 KNIVRYLGSVS----ENGFFKIFMEQVPGGSLSSLL-RSKWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDN 705 (1226)
T ss_pred HhHHHHhhccC----CCCeEEEEeecCCCCcHHHHH-HhccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCc
Confidence 99999999986 777899999998 66666655 5567778 8889999999999999999999 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCc
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYR 251 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~ 251 (393)
+|++.-+ +.+|++|||.++++. .-..+..||..||
T Consensus 706 VLvNTyS------------------------------------------GvlKISDFGTsKRLAginP~TETFTGTLQYM 743 (1226)
T KOG4279|consen 706 VLVNTYS------------------------------------------GVLKISDFGTSKRLAGINPCTETFTGTLQYM 743 (1226)
T ss_pred EEEeecc------------------------------------------ceEEecccccchhhccCCccccccccchhhh
Confidence 9996443 369999999988763 2345678999999
Q ss_pred hhHHHhcC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 252 SVEVLIGA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 252 aPE~~~~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|||++..+ +|+.++|||||||++.||.||++||....... ++..-.+++++
T Consensus 744 APEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmyKv------------------------ 796 (1226)
T KOG4279|consen 744 APEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMYKV------------------------ 796 (1226)
T ss_pred ChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---Hhhhhhcceec------------------------
Confidence 99999876 48999999999999999999999997554321 11111222222
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+.|.+.++++..||.+|+..||-+||+|.++|++||+..-
T Consensus 797 ------------------HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 797 ------------------HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred ------------------CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 233456778889999999999999999999999999999754
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=297.53 Aligned_cols=258 Identities=23% Similarity=0.334 Sum_probs=198.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|.+..+. .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 66 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC--------------DSPYIIGFYG 66 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC--------------CCCCeeeEEE
Confidence 36889999999999999999999999999999886532 2234577899999988 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++||||+.+..++.. ..+++..+..++.|++.||.|||+. |++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~---- 132 (279)
T cd06619 67 AFF----VENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRG---- 132 (279)
T ss_pred EEE----ECCEEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCC----
Confidence 887 45678899999944433332 2377888999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCch
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++...... .....+|..|+|||.+.+..++.+
T Consensus 133 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 173 (279)
T cd06619 133 ---------------------------------------QVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIH 173 (279)
T ss_pred ---------------------------------------CEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCc
Confidence 4999999998765432 334578999999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+||||+++|+|++|+.||............... ........+.
T Consensus 174 ~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------------------- 218 (279)
T cd06619 174 SDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL--LQCIVDEDPP--------------------------------- 218 (279)
T ss_pred chHHHHHHHHHHHHhCCCCchhhcccccccchHHH--HHHHhccCCC---------------------------------
Confidence 99999999999999999999653321110000000 0000000000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.......+..+.++|.+||..||.+||+++|+++||||+....
T Consensus 219 ----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~ 261 (279)
T cd06619 219 ----VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND 261 (279)
T ss_pred ----CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence 0001234567889999999999999999999999999987643
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=295.64 Aligned_cols=256 Identities=21% Similarity=0.338 Sum_probs=201.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
..|++.+.||+|+||.||+|.+..+++.||+|.+.........+..|+.+++.+. .|+|++++.+.+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~i~~~~~~~ 72 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-------------HHRNIATYYGAF 72 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-------------CCCCeeeEeeEE
Confidence 4789999999999999999999999999999998766555567788999888873 589999999988
Q ss_pred eeecCC--CeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 108 KIYSRN--GTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 108 ~~~~~~--~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
...... ....+++|||+ +++|.+.+.......+++..+..++.|++.|++|||++ +++|+||+|+||+++.++
T Consensus 73 ~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~--- 148 (272)
T cd06637 73 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENA--- 148 (272)
T ss_pred eecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCC---
Confidence 754322 35789999999 67888877664445588999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc---
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG--- 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~--- 258 (393)
.++|+|||++...... .....++..|+|||++.+
T Consensus 149 ----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 188 (272)
T cd06637 149 ----------------------------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 188 (272)
T ss_pred ----------------------------------------CEEEccCCCceecccccccCCcccccccccCHhHhccccC
Confidence 4999999998754322 233467889999999863
Q ss_pred --CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 259 --AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 259 --~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..++.++|+||+||++|+|++|..||...... .. ....... +.
T Consensus 189 ~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~------~~---~~~~~~~-~~------------------------- 233 (272)
T cd06637 189 PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RA---LFLIPRN-PA------------------------- 233 (272)
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH------HH---HHHHhcC-CC-------------------------
Confidence 35788999999999999999999999643311 00 0000000 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
........+..+.+||.+||..||.+|||+.++++||||
T Consensus 234 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 -----------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -----------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 000012334578899999999999999999999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=305.07 Aligned_cols=256 Identities=20% Similarity=0.334 Sum_probs=197.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||++.+..+++.+|+|++.... .....+.+|+.++..+ .|++++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG--------------DNQWITTL 66 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC--------------CCCCEeeE
Confidence 47999999999999999999999999999999986421 2223466777777776 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. ....+++||||+ +++|.+++.... ..+++..++.++.|++.||.|||+. |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~- 139 (332)
T cd05623 67 HYAFQ----DENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNG- 139 (332)
T ss_pred EEEEe----cCCEEEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCC-
Confidence 88887 667899999999 789988886533 3488999999999999999999998 999999999999998666
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....||+.|+|||++..
T Consensus 140 ------------------------------------------~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (332)
T cd05623 140 ------------------------------------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 177 (332)
T ss_pred ------------------------------------------CEEEeecchheecccCCcceecccccCccccCHHHHhc
Confidence 4999999988654221 123468999999999873
Q ss_pred -----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 -----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
..++.++|||||||++|+|++|+.||...+ .......+.......+
T Consensus 178 ~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------- 228 (332)
T cd05623 178 MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERFQ----------------------- 228 (332)
T ss_pred cccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHHHHHHHhCCCcccc-----------------------
Confidence 357889999999999999999999997544 1122221111000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
........+..+.+||++||+.++.+ |++++|+++||||.++
T Consensus 229 --------------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 229 --------------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred --------------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 00001235678889999999765554 6899999999999875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=297.02 Aligned_cols=255 Identities=26% Similarity=0.446 Sum_probs=204.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+|++.+.||.|++|.||+|.+..+++.|++|.+.... ...+.+.+|+.+++.+ .|+|++++++.
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~ 84 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL--------------KNPNIVNFLDS 84 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc--------------CCCceeeeeee
Confidence 47999999999999999999999999999999886432 2345677899999988 88999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...++|+||+ +++|...+... .+++.++..++.|++.|+++||++ |++|+||+|+||+++.++
T Consensus 85 ~~----~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~---- 152 (296)
T cd06655 85 FL----VGDELFVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDG---- 152 (296)
T ss_pred Ee----cCceEEEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC----
Confidence 87 567899999999 67777766542 488999999999999999999998 999999999999997766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...... .....++..|+|||.+.+..++
T Consensus 153 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 193 (296)
T cd06655 153 ---------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 193 (296)
T ss_pred ---------------------------------------CEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCC
Confidence 4999999987755332 2234678899999999988889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+|||||++|+|++|+.||...+. ......+.. ...+.
T Consensus 194 ~~~Dv~slGvil~~lltg~~pf~~~~~------~~~~~~~~~--~~~~~------------------------------- 234 (296)
T cd06655 194 PKVDIWSLGIMAIEMVEGEPPYLNENP------LRALYLIAT--NGTPE------------------------------- 234 (296)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh--cCCcc-------------------------------
Confidence 999999999999999999999965441 111111111 00000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 392 (393)
...+...+..+.++|++||..||.+|||+.+++.||||+.++..
T Consensus 235 ------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 235 ------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred ------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence 01123345678899999999999999999999999999987754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=299.41 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=205.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..+|++.+.||+|++|.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|++++++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~ 83 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN--------------KNPNIVNYLD 83 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 368999999999999999999999999999999886432 2335567888999888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+.+.++||||+ ++++.+.+.+. .++...+..++.|++.||.+||+. |++|+||||+||+++.++
T Consensus 84 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~--- 152 (297)
T cd06656 84 SYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDG--- 152 (297)
T ss_pred EEe----cCCEEEEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC---
Confidence 887 567899999999 77888777543 378899999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++...... .....+++.|++||.+.+..+
T Consensus 153 ----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 192 (297)
T cd06656 153 ----------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 192 (297)
T ss_pred ----------------------------------------CEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCC
Confidence 4999999988754332 223467889999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+|||||++|++++|..||...+... .+..+ ...+. |
T Consensus 193 ~~~~Di~slGvil~~l~tg~~pf~~~~~~~------~~~~~-~~~~~-~------------------------------- 233 (297)
T cd06656 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYLI-ATNGT-P------------------------------- 233 (297)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCcch------heeee-ccCCC-C-------------------------------
Confidence 999999999999999999999996543211 00000 00000 0
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
....+...+..+.+++.+||..||.+||+++++++||||+..+..+
T Consensus 234 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (297)
T cd06656 234 ------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279 (297)
T ss_pred ------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence 0001233456678999999999999999999999999999887654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=296.27 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=208.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 66 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI--------------RHPFLVNL 66 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC--------------CCCCccce
Confidence 47999999999999999999999999999999987532 2345677899999998 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+..+++||||+ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~- 138 (290)
T cd05580 67 YGSFQ----DDSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDG- 138 (290)
T ss_pred eeEEE----cCCeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCC-
Confidence 99887 667899999999 88998888665 4589999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++...........+++.|+|||.+.+...+
T Consensus 139 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (290)
T cd05580 139 ------------------------------------------YIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYG 176 (290)
T ss_pred ------------------------------------------CEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCC
Confidence 49999999988765555556788999999999888889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|..||...+ .......+.
T Consensus 177 ~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~--------------------------------------- 211 (290)
T cd05580 177 KAVDWWALGILIYEMLAGYPPFFDDN------PIQIYEKIL--------------------------------------- 211 (290)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHh---------------------------------------
Confidence 99999999999999999999996544 111111111
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
.....++...+..+.++|.+||..||.+|+ +++|+++||||+.+.
T Consensus 212 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 212 ---EGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred ---cCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 011112334467888999999999999999 999999999998753
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=317.18 Aligned_cols=253 Identities=22% Similarity=0.313 Sum_probs=203.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-CceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-KTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
...|.+.+.||+|++|.||+|.+..+ ++.||+|.+.... .....+.+|+.+++.+ .|+||++++
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l--------------~Hpniv~~~ 131 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC--------------DHFGIVKHF 131 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC--------------CCCCEeEEE
Confidence 45699999999999999999998888 7889999765432 2234567899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+. .++..++||||+ +++|.+.+... ....+++.++..++.|++.||.|||++ +|+||||||+|||++.++
T Consensus 132 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~ 206 (478)
T PTZ00267 132 DDFK----SDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTG 206 (478)
T ss_pred EEEE----ECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCC
Confidence 9887 567899999999 78888776432 223588899999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVL 256 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++...... ....+||+.|+|||++
T Consensus 207 -------------------------------------------~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 243 (478)
T PTZ00267 207 -------------------------------------------IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELW 243 (478)
T ss_pred -------------------------------------------cEEEEeCcCceecCCccccccccccCCCccccCHhHh
Confidence 4999999998865432 2234689999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++|||||||++|+|++|+.||...+ ....+..+.. +..
T Consensus 244 ~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~------~~~~~~~~~~--~~~--------------------------- 288 (478)
T PTZ00267 244 ERKRYSKKADMWSLGVILYELLTLHRPFKGPS------QREIMQQVLY--GKY--------------------------- 288 (478)
T ss_pred CCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--CCC---------------------------
Confidence 99889999999999999999999999996543 1111111111 110
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.+++...+..+.++|.+||..||.+||++.+++.|||++.
T Consensus 289 ------------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 289 ------------DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred ------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 0122345567889999999999999999999999999864
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=299.45 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=201.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..++.|+++++||+|+||.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 74 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC--------------NHPYIVKL 74 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC--------------CCCcEeee
Confidence 44678999999999999999999999999999999987542 2345677899999988 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .+...++||||+ ++++...+... ...++...+..++.|++.|+.+||++ +++|+||+|+||+++.++
T Consensus 75 ~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~- 147 (292)
T cd06644 75 LGAFY----WDGKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDG- 147 (292)
T ss_pred EEEEE----eCCeEEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCC-
Confidence 99887 456899999999 55555554432 24589999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~- 258 (393)
.++|+|||.+...... .....++..|+|||.+.+
T Consensus 148 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 185 (292)
T cd06644 148 ------------------------------------------DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCE 185 (292)
T ss_pred ------------------------------------------CEEEccCccceeccccccccceecCCccccCceeeccc
Confidence 4999999987654322 223457889999999853
Q ss_pred ----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 259 ----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 259 ----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
..++.++|+|||||++|+|++|..||...+. ......+ ....+.
T Consensus 186 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~---~~~~~~----------------------- 233 (292)
T cd06644 186 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKI---AKSEPP----------------------- 233 (292)
T ss_pred cccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------HHHHHHH---hcCCCc-----------------------
Confidence 3468899999999999999999999965431 1111111 111000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|++||..||++||+++++++||||+.+..
T Consensus 234 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 234 -------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred -------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 00112344567889999999999999999999999999987653
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=294.73 Aligned_cols=281 Identities=30% Similarity=0.440 Sum_probs=210.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+|++.+.||+|+||.||+|.+..++..||+|.+...... ...+.+|+.+++.+ .|+|++++.+
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~~~ 70 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL--------------KHANIVLLHD 70 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc--------------CCCCEeEEEE
Confidence 5899999999999999999999999999999998654322 23567899999998 8899999988
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++||||+++++.+.+.... ..++...+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~---- 140 (291)
T cd07870 71 IIH----TKETLTFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLG---- 140 (291)
T ss_pred EEe----cCCeEEEEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCC----
Confidence 876 566899999999888888776543 3478888999999999999999998 999999999999997666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+. .+
T Consensus 141 ---------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 181 (291)
T cd07870 141 ---------------------------------------ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDY 181 (291)
T ss_pred ---------------------------------------cEEEeccccccccCCCCCCCCCccccccccCCceeecCCCC
Confidence 4999999988654321 2334568899999998764 47
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ..+++..+....|..+............+ .... .....+...
T Consensus 182 ~~~~Dv~slG~~l~~l~~g~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~ 251 (291)
T cd07870 182 SSALDIWGAGCIFIEMLQGQPAFPGVSD-----VFEQLEKIWTVLGVPTEDTWPGVSKLPNY-KPEW----FLPCKPQQL 251 (291)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCchh-----HHHHHHHHHHHcCCCChhhhhhhhhcccc-cchh----ccccCCcch
Confidence 8899999999999999999999975442 34566666666665544433222111100 0000 000000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..... . ...+..+.+++.+||..||.+|||+.|++.||||
T Consensus 252 ~~~~~-~----~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 252 RVVWK-R----LSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhcc-c----cCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000 0 1124677899999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=303.33 Aligned_cols=286 Identities=27% Similarity=0.425 Sum_probs=217.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++.+|++.+.||+|+||.||+|.+..+++.||||.+... ........+|+.+++.+ .|+|+++
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~ni~~ 68 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL--------------DHENVIA 68 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc--------------CCCCccc
Confidence 456899999999999999999999999999999987642 22234566799999988 7899999
Q ss_pred ccccceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+..... .....++++||++++|.+.+... ..+++..+..++.|++.||.|||++ +++|+||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~ 145 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANC 145 (337)
T ss_pred hHHheecccccccCcEEEEEeCCCCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCC
Confidence 9987763321 22468999999998998887654 4589999999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 146 -------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 182 (337)
T cd07858 146 -------------------------------------------DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLN 182 (337)
T ss_pred -------------------------------------------CEEECcCccccccCCCcccccccccccCccChHHHhc
Confidence 4999999998765332 223457889999999875
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc--ccccCCCCCeeeccC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT--LRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~ 335 (393)
..++.++|+|||||++|+|++|+.||...+ .......+..+.|..+.+.+...... ..+. .....
T Consensus 183 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 250 (337)
T cd07858 183 CSEYTTAIDVWSVGCIFAELLGRKPLFPGKD------YVHQLKLITELLGSPSEEDLGFIRNEKARRYI------RSLPY 250 (337)
T ss_pred CCCCCCcccHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhhcCchhhhHHH------HhcCc
Confidence 457899999999999999999999997654 45566677777777665544211100 0000 00000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. ... .........+..+.++|++||+.||++|||++|+++||||+...
T Consensus 251 ~-~~~------~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 251 T-PRQ------SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred c-ccc------CHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 0 000 00011124567889999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=294.77 Aligned_cols=280 Identities=30% Similarity=0.488 Sum_probs=216.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.|++|.++.. ....+.+.+|+.+++.+ .|+|+++++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~ 66 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL--------------RHENIVNLK 66 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc--------------CCCCeeehh
Confidence 3799999999999999999999999999999988643 22346678999999999 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...+++|||++++++..+.... ..++..++..++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 67 ~~~~----~~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~--- 137 (288)
T cd07833 67 EAFR----RKGRLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESG--- 137 (288)
T ss_pred heEE----ECCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC---
Confidence 9987 466799999999777777665543 4488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~- 259 (393)
.++|+|||++...... .....++..|+|||++.+.
T Consensus 138 ----------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~ 177 (288)
T cd07833 138 ----------------------------------------VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDT 177 (288)
T ss_pred ----------------------------------------CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCC
Confidence 4999999998765432 2234678899999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+||||+++|+|++|..||...+ ..+.+..+....+..+............+. . ........
T Consensus 178 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~- 245 (288)
T cd07833 178 NYGKPVDVWAIGCIMAELLDGEPLFPGDS------DIDQLYLIQKCLGPLPPSHQELFSSNPRFA-G----VAFPEPSQ- 245 (288)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHhhhcccCcccc-c----cccCCCCC-
Confidence 78999999999999999999999997654 345566666666766654433221111000 0 00000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... .++...+..+.+||++||..+|.+|||++++++||||
T Consensus 246 --~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 246 --PESLER--RYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred --cHHHHH--hcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 001111 1223457889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=296.46 Aligned_cols=257 Identities=24% Similarity=0.335 Sum_probs=202.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
...|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|+.+++.+. .|+|++++.+.
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~i~~~~~~ 81 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-------------HHRNIATYYGA 81 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-------------CCCcEEEEeee
Confidence 45899999999999999999999999999999998765544566788888888873 68999999998
Q ss_pred ceeec--CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 107 FKIYS--RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 107 ~~~~~--~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.... ..+.+++++|||+ ++++.+++.......+++..+..++.|++.|++|||++ +++|+||+|+||+++.++
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~-- 158 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENA-- 158 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC--
Confidence 86432 2356899999999 56888887665445588888999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc--
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG-- 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~-- 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 159 -----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~ 197 (282)
T cd06636 159 -----------------------------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 197 (282)
T ss_pred -----------------------------------------CEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc
Confidence 4999999988754322 233467889999999863
Q ss_pred ---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 259 ---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 ---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
..++.++|+|||||++|+|++|..||...... .....+. ...+.
T Consensus 198 ~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~------~~~~~~~---~~~~~------------------------ 244 (282)
T cd06636 198 NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM------RALFLIP---RNPPP------------------------ 244 (282)
T ss_pred CcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH------hhhhhHh---hCCCC------------------------
Confidence 45788999999999999999999999643311 1111000 00000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......+..+.+||++||..||.+|||+.|+++||||
T Consensus 245 -------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 -------------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -------------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 00012345688999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=297.21 Aligned_cols=281 Identities=26% Similarity=0.364 Sum_probs=213.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|++|.||+|.+..+++.+++|.++.... ....+.+|+.+++.+ .|+|++++.
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~~ 70 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL--------------QHPNIVTVK 70 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc--------------CCCCEEEEE
Confidence 479999999999999999999999999999998874322 223456799999998 789999998
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+.. ......++||||++++|.+.+.... ..+++..++.++.|++.||+|||++ |++|+||+|+||+++.++
T Consensus 71 ~~~~~--~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~--- 143 (293)
T cd07843 71 EVVVG--SNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRG--- 143 (293)
T ss_pred EEEEe--cCCCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCC---
Confidence 87762 2237899999999888888876543 3589999999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~- 260 (393)
.++|+|||++...... .....+++.|+|||.+.+..
T Consensus 144 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 183 (293)
T cd07843 144 ----------------------------------------ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKE 183 (293)
T ss_pred ----------------------------------------cEEEeecCceeeccCCccccccccccccccCchhhcCCcc
Confidence 4999999988765433 22345688899999987654
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|..||...+ .......+....+..+...+.............. ...
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 248 (293)
T cd07843 184 YSTAIDMWSVGCIFAELLTKKPLFPGKS------EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTF---------TKY 248 (293)
T ss_pred ccchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchHHHHHhhccchhccccc---------ccc
Confidence 5899999999999999999999997655 4455666666666555544433221110000000 000
Q ss_pred hHHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+ ...++.. .+..+.++|++||+.||++|||+.|+++||||
T Consensus 249 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 249 PYNQL--RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cchhh--hccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00001 1112222 46778899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=304.59 Aligned_cols=256 Identities=19% Similarity=0.327 Sum_probs=198.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||++++..+++.||+|++.... .....+.+|..+++.+ .|++++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~l 66 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG--------------DCQWITTL 66 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 47999999999999999999999999999999986421 2234466778888777 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. ..++.++||||+ +++|..++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~- 139 (331)
T cd05624 67 HYAFQ----DENYLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNG- 139 (331)
T ss_pred EEEEE----cCCEEEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCC-
Confidence 88887 677899999999 888888886532 3588999999999999999999998 999999999999998666
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++....... ....||+.|+|||++.+
T Consensus 140 ------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05624 140 ------------------------------------------HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQA 177 (331)
T ss_pred ------------------------------------------CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhc
Confidence 49999999987654321 22468999999999876
Q ss_pred -----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 -----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
..++.++|+|||||++|+|++|+.||...+ .......+.......+
T Consensus 178 ~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------- 228 (331)
T cd05624 178 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHEERFQ----------------------- 228 (331)
T ss_pred cccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC------HHHHHHHHHcCCCccc-----------------------
Confidence 457889999999999999999999997544 1122222211100000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
........+..+.++|.+||+.++.+ |++++++++||||.+.
T Consensus 229 --------------~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 229 --------------FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred --------------CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 00001234677889999999976654 5689999999999874
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=303.04 Aligned_cols=287 Identities=28% Similarity=0.418 Sum_probs=218.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..++..||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~ 78 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM--------------KHENVIG 78 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc--------------CCCCccc
Confidence 5679999999999999999999999999999999886432 2234577899999999 7899999
Q ss_pred ccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+.+..... .....++|||++++++...+.. ..+++..++.++.|++.||++||+. |++||||||+||+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~ 154 (343)
T cd07880 79 LLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNED 154 (343)
T ss_pred eeeeecCCccccccceEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC
Confidence 9888763221 1235789999998888877754 3488999999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC-
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~- 259 (393)
+ .++|+|||.+...........+++.|++||.+.+.
T Consensus 155 ~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 191 (343)
T cd07880 155 C-------------------------------------------ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWM 191 (343)
T ss_pred C-------------------------------------------CEEEeecccccccccCccccccCCcccCHHHHhCCC
Confidence 5 49999999988766555556678999999999763
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+||||+++|++++|..||.+.+ .......+....+..|..+.......... .........
T Consensus 192 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 258 (343)
T cd07880 192 HYTQTVDIWSVGCIMAEMLTGKPLFKGHD------HLDQLMEIMKVTGTPSKEFVQKLQSEDAK-------NYVKKLPRF 258 (343)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhcchhHH-------HHHHhcccc
Confidence 57899999999999999999999997554 34556666666666666554432211000 000000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+ ..+....+..+.++|.+||+.||.+|||+.+++.||||+...
T Consensus 259 -~~~~~---~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 259 -RKKDF---RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred -CcchH---HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 00000 011234566789999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=296.19 Aligned_cols=260 Identities=26% Similarity=0.445 Sum_probs=206.2
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
..|+.. .+|++.+.||+|++|.||+|.+..++..|++|.+.... ...+.+.+|+.+++.+ .|+|
T Consensus 14 ~~~~~~-~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~ 78 (296)
T cd06654 14 SVGDPK-KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN--------------KNPN 78 (296)
T ss_pred ccCCcc-cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC--------------CCCC
Confidence 344443 59999999999999999999999999999999887432 2345677899999988 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++.+.+. .+.+.++||||+ +++|.+.+... .++..++..++.|++.||+|||+. |++|+||||+||+++
T Consensus 79 v~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~ 150 (296)
T cd06654 79 IVNYLDSYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150 (296)
T ss_pred EeeEEEEEE----eCCEEEEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEc
Confidence 999999887 466899999999 77888877542 378899999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEV 255 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~ 255 (393)
.++ .++|+|||++...... .....+++.|+|||.
T Consensus 151 ~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~ 187 (296)
T cd06654 151 MDG-------------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187 (296)
T ss_pred CCC-------------------------------------------CEEECccccchhccccccccCcccCCccccCHHH
Confidence 766 4999999987754322 223467889999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+..++.++|+|||||++|+|++|+.||...... .....+.. .+. +
T Consensus 188 ~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~------~~~~~~~~-~~~-~------------------------- 234 (296)
T cd06654 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIAT-NGT-P------------------------- 234 (296)
T ss_pred HcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH------HhHHHHhc-CCC-C-------------------------
Confidence 99888899999999999999999999999654421 11111100 000 0
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|.+||..||++|||+.++++||||...+.
T Consensus 235 ------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 235 ------------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred ------------CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 00012234567889999999999999999999999999987654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=301.16 Aligned_cols=289 Identities=30% Similarity=0.455 Sum_probs=219.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+.++|++.+.||+|++|.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|++
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv 77 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM--------------DHENVI 77 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc--------------cCCCHH
Confidence 3567999999999999999999999999999999987642 22234566799999998 789999
Q ss_pred eccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 102 RLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
++.+.+..... .....++|+|+++++|.+.+.. ..+++..+..++.|++.||++||+. |++|+||+|+||+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~ 153 (343)
T cd07851 78 GLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNE 153 (343)
T ss_pred HHHHHhhccccccccccEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECC
Confidence 98887753221 2335899999999999888765 3489999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
++ .++|+|||++...........++..|+|||.+.+.
T Consensus 154 ~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~ 190 (343)
T cd07851 154 DC-------------------------------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 190 (343)
T ss_pred CC-------------------------------------------CEEEccccccccccccccCCcccccccCHHHHhCC
Confidence 66 49999999988765555556778899999998763
Q ss_pred -CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 -~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|+||||+++|++++|+.||.... ....+..+....+..++.++.+...... ... ......
T Consensus 191 ~~~~~~~DvwslGv~l~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~ 257 (343)
T cd07851 191 MHYNQTVDIWSVGCIMAELLTGKTLFPGSD------HIDQLKRIMNLVGTPDEELLQKISSESA-----RNY--IQSLPQ 257 (343)
T ss_pred CCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhcCCCCHHHHhhccchhH-----HHH--HHhccc
Confidence 57899999999999999999999997654 4456667777777666655443221000 000 000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. ....+.. .....+..+.++|++||..||.+|||+.++++||||.....
T Consensus 258 ~-~~~~~~~---~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~ 306 (343)
T cd07851 258 M-PKKDFKE---VFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD 306 (343)
T ss_pred c-CCCCHHH---HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence 0 0000000 01134678899999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=307.69 Aligned_cols=244 Identities=22% Similarity=0.298 Sum_probs=191.0
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|.+..+++.||+|++..... ....+..|.. +++.+ .|+|++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~--------------~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV--------------KHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC--------------CCCCCccEEEEEe
Confidence 368999999999999999999999999875321 1223334443 34445 7999999988886
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.++..++||||+ +++|...+... ..+++..+..++.||+.||+|||+. |++||||||+||+++.++
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~------ 133 (325)
T cd05604 67 ----TTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQG------ 133 (325)
T ss_pred ----cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCC------
Confidence 567899999999 77887777554 3588999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (325)
T cd05604 134 -------------------------------------HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT 176 (325)
T ss_pred -------------------------------------CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCc
Confidence 49999999986432 12234568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+. ......+..
T Consensus 177 ~DvwslG~il~el~~G~~pf~~~~~------~~~~~~~~~---------------------------------------- 210 (325)
T cd05604 177 VDWWCLGAVLYEMLYGLPPFYCRDV------AEMYDNILH---------------------------------------- 210 (325)
T ss_pred CccccccceehhhhcCCCCCCCCCH------HHHHHHHHc----------------------------------------
Confidence 9999999999999999999975441 111111111
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
....+....+..+.++|++||..||.+||++ .++++||||+..
T Consensus 211 --~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 211 --KPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred --CCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 0111123355678899999999999999976 599999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=291.06 Aligned_cols=249 Identities=27% Similarity=0.395 Sum_probs=199.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.|++.+.||+|++|.||.|.+..+++.||+|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~ 67 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL--------------QHERIV 67 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC--------------CCCCee
Confidence 469999999999999999999999999999998764321 124567788999988 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .....++++|++ ++++.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.+
T Consensus 68 ~~~~~~~----~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~ 140 (263)
T cd06625 68 QYYGCLR----DDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSA 140 (263)
T ss_pred eeEEEEc----cCCeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC
Confidence 9999887 556899999999 67888877654 3488899999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE 254 (393)
+ .++|+|||++....... ....++..|+|||
T Consensus 141 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 177 (263)
T cd06625 141 G-------------------------------------------NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPE 177 (263)
T ss_pred C-------------------------------------------CEEEeecccceeccccccccccccCCCcCccccCcc
Confidence 6 49999999986543211 2235678999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|+.||...+. ..........
T Consensus 178 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~----------------------------- 222 (263)
T cd06625 178 VISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA------MAAIFKIATQ----------------------------- 222 (263)
T ss_pred eeccCCCCchhhhHHHHHHHHHHHhCCCCccccch------HHHHHHHhcc-----------------------------
Confidence 99998899999999999999999999999964331 1111111000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.....++...+..+.++|++||..+|.+|||+.|+++||||
T Consensus 223 -----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 223 -----------PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -----------CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 00111234456778899999999999999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=298.19 Aligned_cols=283 Identities=25% Similarity=0.356 Sum_probs=205.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||++.+..++..+|+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 66 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC--------------NSPYIVGFYG 66 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC--------------CCCCCCeEEE
Confidence 36999999999999999999999999999999886432 2234577899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .++.++++|||+ +++|.+++... ..+++..+..++.|++.||+|||+..+++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--- 137 (308)
T cd06615 67 AFY----SDGEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--- 137 (308)
T ss_pred EEe----eCCEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC---
Confidence 887 567899999999 67888887654 44889999999999999999999744899999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||.+.+..++.
T Consensus 138 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 177 (308)
T cd06615 138 ----------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTV 177 (308)
T ss_pred ----------------------------------------cEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCc
Confidence 4999999988654322 23456789999999998888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||||+++|+|++|..||...+... .....+..+.......... .. ...............
T Consensus 178 ~~DiwslG~~l~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~ 241 (308)
T cd06615 178 QSDIWSLGLSLVEMAIGRYPIPPPDAKE----------LEAMFGRPVSEGEAKESHR-PV-----SGHPPDSPRPMAIFE 241 (308)
T ss_pred cchHHHHHHHHHHHHhCCCCCCCcchhh----------HHHhhcCccccccccCCcc-cc-----cCCCCCccchhhHHH
Confidence 9999999999999999999996443111 1111111111000000000 00 000000000000111
Q ss_pred HHhh-----hccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 344 VLTE-----KYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~-----~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.... ....+ ...+..+.+||.+||..||.+|||+.|+++||||.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 242 LLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 1110 00111 1256678999999999999999999999999999874
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=286.62 Aligned_cols=250 Identities=23% Similarity=0.385 Sum_probs=199.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|++|.||++.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|++++++.+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL--------------KHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC--------------CCCCeeeeee
Confidence 5899999999999999999999999999999886432 2234567888888888 7888988887
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ..+..++++||++ ++++.+.+.......+++.++..++.|++.|+++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~---~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~--- 139 (257)
T cd08223 67 SWE---GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTN--- 139 (257)
T ss_pred eec---CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCC---
Confidence 664 2345689999999 67888887665445689999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....+++.|+|||++.+..+
T Consensus 140 ----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 179 (257)
T cd08223 140 ----------------------------------------IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPY 179 (257)
T ss_pred ----------------------------------------cEEEecccceEEecccCCccccccCCcCccChhHhcCCCC
Confidence 4999999988654321 223457889999999999888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++++|++|+.||...+ .......+. .+..|
T Consensus 180 ~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~--~~~~~------------------------------- 220 (257)
T cd08223 180 NYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRII--EGKLP------------------------------- 220 (257)
T ss_pred CchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHH--hcCCC-------------------------------
Confidence 999999999999999999999996433 111111111 11111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..+...+..+.+++.+||+.||.+|||+.++++||||
T Consensus 221 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 --------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred --------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1123456788899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=286.98 Aligned_cols=249 Identities=26% Similarity=0.394 Sum_probs=202.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+... ......+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL--------------DSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc--------------CCCCeehhee
Confidence 488999999999999999999999999999988643 23345677888888888 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|.+.+.......++...+..++.|++.||.|||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~--- 138 (256)
T cd08529 67 SFL----DKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYD--- 138 (256)
T ss_pred eec----cCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCC---
Confidence 887 567899999999 78888888765445688999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....+++.|+|||++.+..+
T Consensus 139 ----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (256)
T cd08529 139 ----------------------------------------NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPY 178 (256)
T ss_pred ----------------------------------------CEEEcccccceeccCccchhhccccCccccCHHHhcCCCC
Confidence 4999999988765432 223357889999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++++|++|+.||...+ .......+.. +..+
T Consensus 179 ~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~------------------------------- 219 (256)
T cd08529 179 NEKSDVWALGVVLYECCTGKHPFDANN------QGALILKIIR--GVFP------------------------------- 219 (256)
T ss_pred CCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc--CCCC-------------------------------
Confidence 999999999999999999999996544 1111111111 1110
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..+...+..+.+++++||+.+|++||++.++++|||+
T Consensus 220 --------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 220 --------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred --------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 1122455678999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=306.48 Aligned_cols=245 Identities=21% Similarity=0.326 Sum_probs=188.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|++..+++.||+|++...... ......|..++.... ...|++++++.+.+.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----------~~~~p~i~~~~~~~~--- 66 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL-----------LDESPFIVGLKFSFQ--- 66 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc-----------cCCCCcCcceEEEEe---
Confidence 79999999999999999999999998643211 122233444544431 126899999988887
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 67 -~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~--------- 133 (330)
T cd05586 67 -TDSDLYLVTDYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATG--------- 133 (330)
T ss_pred -cCCeEEEEEcCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCC---------
Confidence 667899999999 77888777654 4589999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC-CCCchhh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA-GYGPAAD 266 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~D 266 (393)
.++|+|||++..... ......||+.|+|||++.+. .++.++|
T Consensus 134 ----------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D 179 (330)
T cd05586 134 ----------------------------------HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVD 179 (330)
T ss_pred ----------------------------------CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccc
Confidence 499999999865322 22345689999999999765 4789999
Q ss_pred HHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHh
Q psy12288 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLT 346 (393)
Q Consensus 267 iwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (393)
||||||++|+|++|..||...+. ......+.. +.
T Consensus 180 vwslGvil~elltG~~Pf~~~~~------~~~~~~i~~--~~-------------------------------------- 213 (330)
T cd05586 180 FWSLGVLVFEMCCGWSPFYAEDT------QQMYRNIAF--GK-------------------------------------- 213 (330)
T ss_pred eeccccEEEEeccCCCCCCCCCH------HHHHHHHHc--CC--------------------------------------
Confidence 99999999999999999965431 111111110 00
Q ss_pred hhccCC-hhhHHHHHHHHHhccccCCCCCc----CHHHHhcCCCCCCC
Q psy12288 347 EKYHWS-KAEASDFADFLLPMLHVNQKLRA----SAADCLRHPWLNPR 389 (393)
Q Consensus 347 ~~~~~~-~~~~~~~~~li~~~L~~dP~~Rp----t~~ell~hp~~~~~ 389 (393)
..++ ...+..+.++|++||..||.+|| ++.++++||||++.
T Consensus 214 --~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 214 --VRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred --CCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 0011 12356778999999999999998 79999999999864
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=291.50 Aligned_cols=277 Identities=30% Similarity=0.462 Sum_probs=209.5
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
|++.++||+|+||.||+|.+..+++.||+|.++..... .....+|+.+++.+. .|+|++++.+.+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-------------~h~~i~~~~~~~ 67 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-------------PHPNILRLIEVL 67 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-------------CCCCccceEEEE
Confidence 67899999999999999999999999999988753221 223346777777762 589999999887
Q ss_pred eeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 108 KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.. ...+..++||||+++++.+.+.... ..+++.++..++.|++.||++||+. |++|+||+|+||+++. +
T Consensus 68 ~~--~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~------ 136 (282)
T cd07831 68 FD--RKTGRLALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-D------ 136 (282)
T ss_pred ec--CCCCcEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-C------
Confidence 62 2236789999999889998886643 3589999999999999999999998 9999999999999976 4
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC-CCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA-GYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~ 264 (393)
.++|+|||++...... .....++..|+|||.+... .++.+
T Consensus 137 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 179 (282)
T cd07831 137 -------------------------------------ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPK 179 (282)
T ss_pred -------------------------------------CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcc
Confidence 4999999998765322 2234578899999987654 46889
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+|||||++|+|++|..||.+.+ ..+.+..+....+..+..+......... . .. ..+.......
T Consensus 180 ~Di~slGv~l~el~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~---~~~~~~~~~~--- 244 (282)
T cd07831 180 MDIWAVGCVFFEILSLFPLFPGTN------ELDQIAKIHDVLGTPDAEVLKKFRKSRH-M--NY---NFPSKKGTGL--- 244 (282)
T ss_pred hhHHHHHHHHHHHHcCCcCCCCCC------HHHHHHHHHHHcCCCCHHHHHhhccccc-c--cc---cCcccccccH---
Confidence 999999999999999999997765 4556677777777777665322111100 0 00 0000000000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. .+....+..+.++|.+||..||++|||++++++||||
T Consensus 245 -~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 245 -R---KLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred -H---HHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0 0112457889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=299.12 Aligned_cols=286 Identities=27% Similarity=0.449 Sum_probs=215.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|.+.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|+++
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~niv~ 78 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM--------------QHENVIG 78 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc--------------CCCCccc
Confidence 356999999999999999999999999999999988643 22234567899999998 7899999
Q ss_pred ccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+.+..... .....++|+|++..++..... ..++.+.+..++.|++.||+|||+. +++||||||+||+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~ 153 (342)
T cd07879 79 LLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNED 153 (342)
T ss_pred hhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCC
Confidence 9988763321 224579999999877766542 2488999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .++|+|||++...........++..|+|||.+.+ .
T Consensus 154 ~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 190 (342)
T cd07879 154 C-------------------------------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWM 190 (342)
T ss_pred C-------------------------------------------CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCcc
Confidence 6 4999999998766554445567889999999876 4
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc-cccCCCCCeeeccCCCc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL-RYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|+|||||++|+|++|+.||.+.+ ....+..+....|..+..+........ ..+. ...+....
T Consensus 191 ~~~~~~Dv~slGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 259 (342)
T cd07879 191 HYNQTVDIWSVGCIMAEMLTGKTLFKGKD------YLDQLTQILKVTGVPGPEFVQKLEDKAAKSYI-----KSLPKYPR 259 (342)
T ss_pred ccCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhcccchHHHH-----hhcCCccc
Confidence 57899999999999999999999997644 455666667766665554433221110 0000 00000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. .........+..+.+||++||+.||.+||++++++.||||...+.
T Consensus 260 ~-------~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 260 K-------DFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred c-------hHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0 000001134567889999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=295.52 Aligned_cols=258 Identities=25% Similarity=0.383 Sum_probs=202.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++++.||+|+||.||+|.+..++..||+|.+... ......+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA--------------VSPYIVDFYG 66 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc--------------CCCcHHhhhh
Confidence 4789999999999999999999999999999988643 22235677899999988 8899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .++..++||||+ ++++..++.... ...+++..+..++.|++.||.|||++.+++|+||||+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-- 140 (286)
T cd06622 67 AFF----IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG-- 140 (286)
T ss_pred hee----cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--
Confidence 887 567899999999 667766665421 235899999999999999999999744999999999999997765
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCC--
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAG-- 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~-- 260 (393)
.++|+|||.+...... .....++..|+|||.+.+..
T Consensus 141 -----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (286)
T cd06622 141 -----------------------------------------QVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPN 179 (286)
T ss_pred -----------------------------------------CEEEeecCCcccccCCccccCCCccCccCcchhcCCCCC
Confidence 4999999988755332 23345788999999986543
Q ss_pred ----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 261 ----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 261 ----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
++.++|+|||||++|+|++|+.||..... ......+.......+
T Consensus 180 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~-------------------------- 227 (286)
T cd06622 180 QNPTYTVQSDVWSLGLSILEMALGRYPYPPETY------ANIFAQLSAIVDGDP-------------------------- 227 (286)
T ss_pred ccCCCCcccchHhHHHHHHHHHhCCCCCCCcch------hhHHHHHHHHhhcCC--------------------------
Confidence 47899999999999999999999965431 111111111111111
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..++...+..+.++|.+||..+|.+||+++++++||||....
T Consensus 228 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 228 ------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred ------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 112344667888999999999999999999999999997654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=302.26 Aligned_cols=244 Identities=21% Similarity=0.330 Sum_probs=190.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|++..+++.||+|++...... ...+..|.. +++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~--------------~h~~Iv~~~~~~~ 66 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV--------------KHPFLVGLHFSFQ 66 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC--------------CCCCCCceeEEEE
Confidence 3699999999999999999999999998753211 122233332 34445 7899999988887
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~------ 133 (325)
T cd05602 67 ----TADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQG------ 133 (325)
T ss_pred ----cCCeEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCC------
Confidence 667899999999 77888777654 3488899999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (325)
T cd05602 134 -------------------------------------HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRT 176 (325)
T ss_pred -------------------------------------CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCc
Confidence 49999999986432 12334568999999999999889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+ .......+..
T Consensus 177 ~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~---------------------------------------- 210 (325)
T cd05602 177 VDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILN---------------------------------------- 210 (325)
T ss_pred cccccccHHHHHHhcCCCCCCCCC------HHHHHHHHHh----------------------------------------
Confidence 999999999999999999997544 1122121111
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHH----HHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA----DCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~----ell~hp~~~~~ 389 (393)
....+....+..+.++|.+||..||.+||++. ++++|+||...
T Consensus 211 --~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 211 --KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred --CCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 01112234566788999999999999999875 89999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=292.51 Aligned_cols=276 Identities=28% Similarity=0.470 Sum_probs=210.1
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.++||.|++|.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|++++++++.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l--------------~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL--------------NHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc--------------CCCCccCHhhe
Confidence 678899999999999999999999999999887542 2234577899999998 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...+++|||+++++.+.+.......+++..+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~----- 136 (283)
T cd07835 67 VH----SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREG----- 136 (283)
T ss_pred ec----cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCC-----
Confidence 86 56789999999988998888765534589999999999999999999998 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~ 262 (393)
.++|+|||.+...... .....++..|+|||++.+. .++
T Consensus 137 --------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 178 (283)
T cd07835 137 --------------------------------------ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYS 178 (283)
T ss_pred --------------------------------------cEEEeecccccccCCCccccCccccccCCCCCceeecCcccC
Confidence 4999999998755322 2233567889999988764 468
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|++||...+ ....+..+.+..+......+........+... . .....
T Consensus 179 ~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~---- 242 (283)
T cd07835 179 TPVDIWSIGCIFAEMVNRRPLFPGDS------EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT---F---PKWAR---- 242 (283)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhhhhhchhhhhh---c---ccccc----
Confidence 89999999999999999999997654 44445555555555544433221111000000 0 00000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. .........+..+.++|.+||+.||.+|||++|+++||||
T Consensus 243 ~---~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 243 Q---DLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred c---chhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0 0001113445678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=302.16 Aligned_cols=244 Identities=24% Similarity=0.349 Sum_probs=191.1
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHH-HHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++||+|+||.||+|++..+++.||+|++..... ....+..|.. +++.+ .|+|++++.+.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~--------------~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL--------------KHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC--------------CCCCccceeeEEE
Confidence 369999999999999999999999999875321 1222333433 45555 7999999988876
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|...+... ..+++..+..++.||+.||+|||+. |++||||||+||+++.++
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~------ 133 (321)
T cd05603 67 ----TAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQG------ 133 (321)
T ss_pred ----cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCC------
Confidence 567899999999 67887776554 3488999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||++.... .......||+.|+|||++.+..++.+
T Consensus 134 -------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 176 (321)
T cd05603 134 -------------------------------------HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRT 176 (321)
T ss_pred -------------------------------------CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCc
Confidence 49999999886432 12233468999999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|+|++|..||...+ .......+
T Consensus 177 ~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i------------------------------------------ 208 (321)
T cd05603 177 VDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDNI------------------------------------------ 208 (321)
T ss_pred CcccccchhhhhhhcCCCCCCCCC------HHHHHHHH------------------------------------------
Confidence 999999999999999999997543 11111111
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
......++...+..+.++|.+||..||.+||++ .++++||||...
T Consensus 209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 209 LHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred hcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 111112334556778899999999999999975 599999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=302.21 Aligned_cols=250 Identities=19% Similarity=0.275 Sum_probs=191.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.+. .++..||+|+++... .....+.+|+.+++.+. .|+|
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~n 72 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-------------NHLN 72 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-------------cCcc
Confidence 368999999999999999999753 345679999987432 22345788999999884 6899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. ..+..++++|||+ +|+|.+++....
T Consensus 73 iv~~~~~~~---~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T cd05102 73 VVNLLGACT---KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRF 149 (338)
T ss_pred eeeEEeEec---CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccc
Confidence 999998765 2345689999999 788888776421
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccC
Q psy12288 137 ------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198 (393)
Q Consensus 137 ------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
...++..++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~----------------- 211 (338)
T cd05102 150 QPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENN----------------- 211 (338)
T ss_pred ccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCC-----------------
Confidence 12367788899999999999999998 999999999999998766
Q ss_pred CcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHH
Q psy12288 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACM 273 (393)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~ 273 (393)
.++|+|||+++..... .....++..|+|||++.+..++.++|||||||+
T Consensus 212 --------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i 265 (338)
T cd05102 212 --------------------------VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVL 265 (338)
T ss_pred --------------------------cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHH
Confidence 4999999998754321 112345678999999999889999999999999
Q ss_pred HHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC
Q psy12288 274 AFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS 352 (393)
Q Consensus 274 l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (393)
+|+|++ |..||.+.... ..+..... .+.. ...+
T Consensus 266 l~el~~~g~~pf~~~~~~------~~~~~~~~-~~~~---------------------------------------~~~~ 299 (338)
T cd05102 266 LWEIFSLGASPYPGVQIN------EEFCQRLK-DGTR---------------------------------------MRAP 299 (338)
T ss_pred HHHHHhCCCCCCCCCCcc------HHHHHHHh-cCCC---------------------------------------CCCC
Confidence 999997 99999754321 11111110 0000 0012
Q ss_pred hhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 353 KAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 353 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+..+.+++.+||..||.+|||+.|+++
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 300 ENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 344567889999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=292.69 Aligned_cols=253 Identities=26% Similarity=0.407 Sum_probs=204.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||.|++|.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 66 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC--------------RSPYITKYYG 66 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc--------------CCCCeeeeeE
Confidence 47899999999999999999999999999999887542 2234577899999998 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++|+|++ +++|.+.+... .++...+..++.|++.|+.+||++ +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~--- 135 (274)
T cd06609 67 SFL----KGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEG--- 135 (274)
T ss_pred EEE----ECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCC---
Confidence 876 557899999999 67888877654 488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+..+
T Consensus 136 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 175 (274)
T cd06609 136 ----------------------------------------DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGY 175 (274)
T ss_pred ----------------------------------------CEEEcccccceeecccccccccccCCccccChhhhccCCC
Confidence 4999999998765432 234467888999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ......+.. +. +.
T Consensus 176 ~~~sDv~slG~il~~l~tg~~p~~~~~~------~~~~~~~~~--~~-~~------------------------------ 216 (274)
T cd06609 176 DEKADIWSLGITAIELAKGEPPLSDLHP------MRVLFLIPK--NN-PP------------------------------ 216 (274)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcccCch------HHHHHHhhh--cC-CC------------------------------
Confidence 9999999999999999999999964431 111111100 00 00
Q ss_pred HHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392 (393)
Q Consensus 342 ~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 392 (393)
..... .+..+.+++.+||..||.+|||++++++||||++.+++
T Consensus 217 --------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 217 --------SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred --------CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 00111 45678899999999999999999999999999988764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG0986|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=300.06 Aligned_cols=256 Identities=25% Similarity=0.356 Sum_probs=213.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.|..-++||+|+||.|+-|+...||+.+|.|.+.+.... ..-..+|-.+|..+ ..+.||.+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV--------------~s~FiVsl 250 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV--------------SSPFIVSL 250 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh--------------ccCcEEEE
Confidence 5688999999999999999999999999999977543211 23346788899998 66678888
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.-.|. ..+.+|+|+..| ||+|.-.+......+|++..++.++.+|+.||+.||.. +||+|||||+|||+|+.++
T Consensus 251 aYAfe----Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~Gh 325 (591)
T KOG0986|consen 251 AYAFE----TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGH 325 (591)
T ss_pred eeeec----CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCC
Confidence 87787 778899999999 78887777666666799999999999999999999998 9999999999999999884
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
++++|+|+|..+. .+....+||..|||||++.+..
T Consensus 326 -------------------------------------------vRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~ 362 (591)
T KOG0986|consen 326 -------------------------------------------VRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV 362 (591)
T ss_pred -------------------------------------------eEeeccceEEecCCCCccccccCcccccCHHHHcCCc
Confidence 9999999998763 4566679999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.+.|.|||||++|+|+.|+.||.....+.- -.++
T Consensus 363 Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk------~eEv-------------------------------------- 398 (591)
T KOG0986|consen 363 YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK------REEV-------------------------------------- 398 (591)
T ss_pred ccCCccHHHHHhHHHHHHcccCchhhhhhhhh------HHHH--------------------------------------
Confidence 99999999999999999999999975543221 0011
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
-+.++....+++...++++.++.+.+|+.||++|+. ++++-+||||+++
T Consensus 399 drr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 399 DRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 112333444567788999999999999999999985 6799999999985
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=299.42 Aligned_cols=284 Identities=24% Similarity=0.384 Sum_probs=202.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.+|++.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l--------------~h~~i~~~~~ 69 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL--------------DHDNIVKVYE 69 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc--------------CCCcchhhHh
Confidence 469999999999999999999999999999999876433 2335577899999999 7888888887
Q ss_pred cceeecC----------CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 106 DFKIYSR----------NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 106 ~~~~~~~----------~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
.+..... .....++||||+++++.+.+... .+++..++.++.|++.||.|||+. |++||||||+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Ni 145 (342)
T cd07854 70 VLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANV 145 (342)
T ss_pred hhcccccccccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHE
Confidence 7653221 12368999999988888777543 488999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQ 249 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~ 249 (393)
+++.++. .++++|||.+...... .....++..
T Consensus 146 li~~~~~------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 183 (342)
T cd07854 146 FINTEDL------------------------------------------VLKIGDFGLARIVDPHYSHKGYLSEGLVTKW 183 (342)
T ss_pred EEcCCCc------------------------------------------eEEECCcccceecCCcccccccccccccccc
Confidence 9974432 4899999998754321 122356888
Q ss_pred CchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|+|||.+.. ..++.++|||||||++|+|++|+.||.... .......+......................
T Consensus 184 y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 253 (342)
T cd07854 184 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH------ELEQMQLILESVPVVREEDRNELLNVIPSF---- 253 (342)
T ss_pred ccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhhhhhhhhh----
Confidence 999998765 457889999999999999999999997554 222222222221111111110000000000
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
........... ...+....+..+.+||++||+.||.+|||+.|++.||||+.
T Consensus 254 -~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 254 -VRNDGGEPRRP-------LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred -hhhcccccCCC-------HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 00000000000 00011235567889999999999999999999999999974
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG2345|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=273.53 Aligned_cols=255 Identities=25% Similarity=0.281 Sum_probs=199.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.||++.+.||+|||+.||++.+..++..+|+|.+.... ...+...+|++..+.+ .|||++++++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf--------------~s~~vl~l~d 85 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF--------------NSPNVLRLVD 85 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh--------------CCcchHHHHH
Confidence 479999999999999999999999999999999876443 4567788999999999 8899999888
Q ss_pred cceeecC-CCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEee
Q psy12288 106 DFKIYSR-NGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMCV 179 (393)
Q Consensus 106 ~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~~ 179 (393)
.-..... .....|++++|. .|++++.+.... +..+++.++..++.++++||++||+. . ++||||||.|||+..
T Consensus 86 h~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~ 164 (302)
T KOG2345|consen 86 HQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSD 164 (302)
T ss_pred HHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecC
Confidence 7654433 345689999998 899999886644 23489999999999999999999998 7 999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------------CCCCCCC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------FADEIQT 247 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------~~~~~~t 247 (393)
++ .+++.|||.+...... ......|
T Consensus 165 ~~-------------------------------------------~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct 201 (302)
T KOG2345|consen 165 SG-------------------------------------------LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCT 201 (302)
T ss_pred CC-------------------------------------------ceEEEeccCccccceEeechHHHHHHHHHHHHhCC
Confidence 65 3899999998765322 1223558
Q ss_pred CCCchhHHHhcC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 248 RQYRSVEVLIGA---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 248 ~~y~aPE~~~~~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
..|+|||.+.-. ..+.++|||||||++|.|+.|..||...-. -.|.+.- ...
T Consensus 202 ~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---------------~GgSlaL----------Av~ 256 (302)
T KOG2345|consen 202 IPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---------------QGGSLAL----------AVQ 256 (302)
T ss_pred CcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---------------cCCeEEE----------eee
Confidence 999999998753 468999999999999999999999953221 1111110 000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+..- ..+-.+..+..+.++|+.||..||.+||++.+++.+
T Consensus 257 n~q~-------------------s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 257 NAQI-------------------SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred cccc-------------------ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 0000 001113478899999999999999999999999865
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=300.00 Aligned_cols=283 Identities=30% Similarity=0.459 Sum_probs=219.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.||||.+... ....+.+.+|+.+++.+ .|++++++.+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL--------------RHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc--------------CCcchhhhhh
Confidence 699999999999999999999999999999988753 23346788899999998 7899999999
Q ss_pred cceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+.... ......+++|+|+++++.+.+.... .+++..+..++.|++.||++||+. |++|+||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~--- 140 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNC--- 140 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCC---
Confidence 887432 1224789999999888888876543 589999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||.+...... .....++..|+|||.+.+
T Consensus 141 ----------------------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 180 (330)
T cd07834 141 ----------------------------------------DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS 180 (330)
T ss_pred ----------------------------------------CEEEcccCceEeecccccccccccccccccCcCCceeeec
Confidence 4999999988765432 233467889999999988
Q ss_pred C-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc--ccccccCCCCCeeeccC
Q psy12288 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK--KTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 ~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 335 (393)
. .++.++|+||||+++|+|++|.+||.+.+ .......+....+..+...+.... ....+... ...
T Consensus 181 ~~~~~~~sDi~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 248 (330)
T cd07834 181 SSRYTKAIDIWSVGCIFAELLTRKPLFPGRD------YIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKS------LPK 248 (330)
T ss_pred ccCCCcchhHHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHhcCCCChhHhhhccccchhhHHhh------ccc
Confidence 7 78999999999999999999999998766 455667777777776665443211 00000000 000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..... .. ......+..+.++|++||..||.+|||+++++.||||++..
T Consensus 249 ~~~~~----~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 249 KPKKP----LS---KLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred CCcch----hH---HhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00000 00 01123567889999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=289.43 Aligned_cols=277 Identities=29% Similarity=0.488 Sum_probs=209.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+|++.++||.|++|.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|+|++++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~~ 66 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL--------------KHENIVRLHDV 66 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh--------------cCCCEeeeeee
Confidence 5899999999999999999999999999999887542 2235567899999998 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ..+..++||||+.+++.+++.... ...+++..+..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~---- 137 (284)
T cd07836 67 IH----TENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRG---- 137 (284)
T ss_pred Ee----eCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCC----
Confidence 87 556789999999888888876533 23488999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+. .+
T Consensus 138 ---------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 178 (284)
T cd07836 138 ---------------------------------------ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTY 178 (284)
T ss_pred ---------------------------------------cEEEeecchhhhhcCCccccccccccccccChHHhcCCCCC
Confidence 4999999988754332 2234568889999998764 46
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||.+.+ ..+....+....+......+........+ . ...+...
T Consensus 179 ~~~~Dv~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~---- 242 (284)
T cd07836 179 STSIDIWSVGCIMAEMITGRPLFPGTN------NEDQLLKIFRIMGTPTESTWPGISQLPEY-K-----PTFPRYP---- 242 (284)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCChhhHHHHhcCchh-c-----ccccCCC----
Confidence 889999999999999999999997655 34455555555444333332222111000 0 0000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...... +....+..+.+++.+||..||.+||++.|+++||||
T Consensus 243 ~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 243 PQDLQQ---LFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hHHHHH---HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011111 112346778899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=296.83 Aligned_cols=282 Identities=30% Similarity=0.436 Sum_probs=216.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|+++
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l--------------~h~~iv~ 80 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM--------------KHENVIG 80 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc--------------CCCcccc
Confidence 4579999999999999999999999999999999886432 1235567899999998 8899999
Q ss_pred ccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+.+.... ......+++++++++++.+.+... .+++..+..++.|++.||+|||+. |++|+||||+||+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 81 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNED 156 (345)
T ss_pred eeeeeeecccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCC
Confidence 988775322 123457899999998988776543 488999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .++|+|||++...........++..|+|||.+.+ .
T Consensus 157 ~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 193 (345)
T cd07877 157 C-------------------------------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 193 (345)
T ss_pred C-------------------------------------------CEEEecccccccccccccccccCCCccCHHHHhCcc
Confidence 6 4999999998876555555677899999999877 4
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+|||||++|+|++|+.||.... ....+..+....+..+............ +
T Consensus 194 ~~~~~~DvwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 251 (345)
T cd07877 194 HYNQTVDIWSVGCIMAELLTGRTLFPGTD------HIDQLKLILRLVGTPGAELLKKISSESA----------------R 251 (345)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHhhcccHhH----------------H
Confidence 57889999999999999999999997544 4455666666666666655433211100 0
Q ss_pred hhHHHHhhh--c---cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEK--Y---HWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~--~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+... . ......+..+.++|.+||..||.+||++.++++||||++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred HHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence 000000000 0 00012456788999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=288.04 Aligned_cols=255 Identities=28% Similarity=0.391 Sum_probs=200.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||.|++|.||+|....++..+++|++.... ...+.+.+|+.+++.+ .|++++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC--------------NHPNVVKYYT 66 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc--------------CCCCEEEEEE
Confidence 47999999999999999999999899999999986432 2346678899999888 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .+...+++||++ ++++.+.+..... ..+++..+..++.|++.||++||++ |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~-- 139 (267)
T cd06610 67 SFV----VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDG-- 139 (267)
T ss_pred EEe----eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCC--
Confidence 776 566799999999 7788888765432 4588999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-------CCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-------ADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++....... ....++..|++||.+
T Consensus 140 -----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~ 178 (267)
T cd06610 140 -----------------------------------------SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178 (267)
T ss_pred -----------------------------------------CEEEcccchHHHhccCccccccccccccCChhhcChHHH
Confidence 49999999886554321 223578899999999
Q ss_pred hcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
... .++.++|+||||+++|+|++|+.||...+... .+. ......+... ..
T Consensus 179 ~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~---~~~~~~~~~~-----------~~--------- 229 (267)
T cd06610 179 EQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLM---LTLQNDPPSL-----------ET--------- 229 (267)
T ss_pred ccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHH---HHhcCCCCCc-----------CC---------
Confidence 877 68999999999999999999999997554221 111 1111100000 00
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......+..+.+++.+||..||++|||+.++++||||
T Consensus 230 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 230 -------------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -------------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00012456788899999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=288.75 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=202.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|++|.||+|.+..+++.+++|++.......+.+.+|+.+++.+. .|+|++++++.+
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~i~~~~~~~ 72 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-------------NHPNIATFYGAF 72 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-------------CCCChheEEEEE
Confidence 5899999999999999999999989999999998876555677889999999873 689999999988
Q ss_pred eeec--CCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 108 KIYS--RNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 108 ~~~~--~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.... ..+..++++|||+ +++|.+.+.... ...++...+..++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~- 150 (275)
T cd06608 73 IKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNA- 150 (275)
T ss_pred EecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCC-
Confidence 7544 2466799999999 567777765432 34588999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....++..|+|||.+...
T Consensus 151 ------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 188 (275)
T cd06608 151 ------------------------------------------EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACD 188 (275)
T ss_pred ------------------------------------------eEEECCCccceecccchhhhcCccccccccCHhHhccc
Confidence 4999999987654322 2334578899999998643
Q ss_pred -----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 260 -----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 260 -----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.++.++||||||+++|+|++|+.||..... ...+..+.. +..+
T Consensus 189 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~--~~~~------------------------ 236 (275)
T cd06608 189 EQPDASYDARSDVWSLGITAIELADGKPPLCDMHP------MRALFKIPR--NPPP------------------------ 236 (275)
T ss_pred ccccCCccccccHHHhHHHHHHHHhCCCCccccch------HHHHHHhhc--cCCC------------------------
Confidence 367889999999999999999999964331 111111110 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+...+..+.++|.+||..||++|||+.|+++|||+
T Consensus 237 -------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 -------------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred -------------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 000112345678899999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=291.90 Aligned_cols=283 Identities=29% Similarity=0.398 Sum_probs=209.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.++|++.++||+|++|.||+|.+..+++.+|+|.+.... .......+|+.+++.+ .|+|++++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 72 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL--------------KHPNVVPL 72 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc--------------CCCCccch
Confidence 568999999999999999999999999999999876432 1234567899999998 78899998
Q ss_pred cccceeecC----CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 104 LNDFKIYSR----NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 104 ~~~~~~~~~----~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
++.+..... ....+++|+||+++++...+.... ..+++..+..++.|++.||+|||++ |++|+||||+||+++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~ 150 (311)
T cd07866 73 IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDN 150 (311)
T ss_pred hhheecccccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC
Confidence 887754321 245689999999888887776532 4589999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--------------CCCC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--------------ADEI 245 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--------------~~~~ 245 (393)
++ .++|+|||++....... ....
T Consensus 151 ~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (311)
T cd07866 151 QG-------------------------------------------ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLV 187 (311)
T ss_pred CC-------------------------------------------CEEECcCccchhccCCCcccccCCcccccccccce
Confidence 76 49999999887543211 1124
Q ss_pred CCCCCchhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 246 QTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 246 ~t~~y~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
+++.|+|||.+.+. .++.++||||||+++|+|++|++||.+.+ .......+....+..+...+..........
T Consensus 188 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (311)
T cd07866 188 VTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS------DIDQLHLIFKLCGTPTEETWPGWRSLPGCE 261 (311)
T ss_pred eccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhchhhhhccccc
Confidence 57789999998764 47899999999999999999999997655 445556666666654443322111110000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. . ......+.. ..... ...+..+.++|++||..||.+|||+.|++.||||
T Consensus 262 ~----~-~~~~~~~~~----~~~~~---~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 262 G----V-HSFTNYPRT----LEERF---GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred c----c-ccCCCCCcc----HHHHc---ccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 0 0 000000000 00000 1233678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=292.21 Aligned_cols=255 Identities=25% Similarity=0.365 Sum_probs=199.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
-|++.++||+|+||.||+|.+..++..+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~ii~~~~~~ 71 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC--------------DHPNIVKLLDAF 71 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC--------------CCCCeeeEEEEE
Confidence 4788899999999999999999999999999886432 2345677899999998 899999999888
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++|+||+ ++++...+... ...+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 72 ~----~~~~~~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~----- 140 (282)
T cd06643 72 Y----YENNLWILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDG----- 140 (282)
T ss_pred e----eCCEEEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCC-----
Confidence 6 556799999999 55665555432 24588999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh-----c
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI-----G 258 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~-----~ 258 (393)
.++++|||++...... .....++..|+|||++. +
T Consensus 141 --------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 182 (282)
T cd06643 141 --------------------------------------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 182 (282)
T ss_pred --------------------------------------CEEEccccccccccccccccccccccccccCHhhccccCCCC
Confidence 4999999988654322 23346788999999984 3
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+||+||++|+|++|..||...+. ......+.....+
T Consensus 183 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~~~~~------------------------------ 226 (282)
T cd06643 183 RPYDYKADVWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSEPP------------------------------ 226 (282)
T ss_pred CCCCccchhhhHHHHHHHHccCCCCccccCH------HHHHHHHhhcCCC------------------------------
Confidence 3467899999999999999999999965441 1111111111000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|++||..||.+||++.++++||||+....
T Consensus 227 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 227 ---------TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred ---------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 00112234567889999999999999999999999999987654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG0574|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=293.68 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=209.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+-|+++++||+|+||.||+|.++.+|..+|||.+..+. ..+.+.+|+.+++.+ ..+.++++++.+
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC--------------~S~yVVKYYGSY 97 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQC--------------KSKYVVKYYGSY 97 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHc--------------CCchhhhhhhhh
Confidence 35889999999999999999999999999999887543 568889999999999 889999999999
Q ss_pred eeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+.-+|||||||| |++.+.+.. ...+++++++..+++.-++||+|||.. .-+|||||..|||++.++
T Consensus 98 F----K~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G----- 166 (502)
T KOG0574|consen 98 F----KHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDG----- 166 (502)
T ss_pred c----cCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccc-----
Confidence 8 6667999999995 566655544 446799999999999999999999987 999999999999998887
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
..||.|||.+..+... ....+||+.|||||++..-+|..
T Consensus 167 --------------------------------------~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~ 208 (502)
T KOG0574|consen 167 --------------------------------------IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDT 208 (502)
T ss_pred --------------------------------------hhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccch
Confidence 4899999999877543 34567999999999999999999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++||||||++..||..|++||.+.-++.. +.-+....|+
T Consensus 209 ~ADIWSLGITaIEMAEG~PPYsDIHPMRA---------IFMIPT~PPP-------------------------------- 247 (502)
T KOG0574|consen 209 KADIWSLGITAIEMAEGRPPYSDIHPMRA---------IFMIPTKPPP-------------------------------- 247 (502)
T ss_pred hhhHhhhcchhhhhhcCCCCcccccccce---------eEeccCCCCC--------------------------------
Confidence 99999999999999999999965543210 1000011111
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+.-+..-+.+|.||+++||..+|++|-||-++++|||+++-
T Consensus 248 ----TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 248 ----TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred ----CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 111123456789999999999999999999999999999874
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=290.69 Aligned_cols=279 Identities=28% Similarity=0.446 Sum_probs=206.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.++||+|+||.||+|.+..+++.||+|.+..... ..+.+.+|+.+++.+ .|+|+++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL--------------RHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc--------------CCcchhhHH
Confidence 479999999999999999999999999999998764322 234567899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++||||+.++++..+.... ..++..++..++.|++.||+|||+. +++|+||+|+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~--- 137 (286)
T cd07846 67 EVFR----RKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSG--- 137 (286)
T ss_pred Hhcc----cCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCC---
Confidence 9886 667899999999666555554433 3488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.++|+|||++...... .....++..|+|||.+.+. .
T Consensus 138 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 177 (286)
T cd07846 138 ----------------------------------------VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTK 177 (286)
T ss_pred ----------------------------------------cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccc
Confidence 4999999988754322 2234578899999998764 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++||||||+++|+|++|++||...+ ..+....+....+..+.......... ..... ...+.....
T Consensus 178 ~~~~~Dv~slG~~l~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~- 245 (286)
T cd07846 178 YGRAVDIWAVGCLVTEMLTGEPLFPGDS------DIDQLYHIIKCLGNLIPRHQEIFQKN-PLFAG----MRLPEVKEI- 245 (286)
T ss_pred cCchHhHHHHHHHHHHHHcCCCCCCCCc------hHHHHHHHHHHhCCCchhhHHHhccc-hHhhc----cccccccCc-
Confidence 6889999999999999999999997554 34455555555555433211100000 00000 000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..........+..+.+++.+||..||.+||++.++++||||
T Consensus 246 -----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 246 -----EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred -----chHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 00000112456788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >KOG0669|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=282.45 Aligned_cols=289 Identities=25% Similarity=0.432 Sum_probs=228.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe---cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
..|.-..+||+|+||.||+|+...+++.||+|..- ..........+|+.+|..+ .|+|++.++
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l--------------kHenv~nli 82 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL--------------KHENVVNLI 82 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh--------------cchhHHHHH
Confidence 47888999999999999999999999999988543 2455667788999999999 677777776
Q ss_pred ccceeecC----CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 105 NDFKIYSR----NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 105 ~~~~~~~~----~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
..+..... ....+++||.+|..+|.-++.... ..++..++.++|.+++.||.|+|.+ .|+|||+|++|+|++.|
T Consensus 83 Eic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~d 160 (376)
T KOG0669|consen 83 EICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKD 160 (376)
T ss_pred HHHhhccCCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCC
Confidence 66654322 334589999999999998887654 4589999999999999999999988 99999999999999988
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aP 253 (393)
+ .++|+|||+++.+..+ ..+++-|.+|++|
T Consensus 161 g-------------------------------------------ilklADFGlar~fs~~~n~~kprytnrvvTLwYrpp 197 (376)
T KOG0669|consen 161 G-------------------------------------------ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPP 197 (376)
T ss_pred c-------------------------------------------eEEeeccccccceecccccCCCCcccceeeeecCCH
Confidence 8 5999999999766432 2334558999999
Q ss_pred HHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|.+.+- .++++.|||..||++.+|+++.+.+.+.+ ...++.-|..+.|.+..++|....+..-+ ..-.
T Consensus 198 EllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt------eqqql~~Is~LcGs~tkevWP~~d~lpL~-----~sie 266 (376)
T KOG0669|consen 198 ELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT------EQQQLHLISQLCGSITKEVWPNVDNLPLY-----QSIE 266 (376)
T ss_pred HHhhcccccCCcchhHhHHHHHHHHHccCccccCCh------HHHHHHHHHHHhccCCcccCCCcccchHH-----Hhcc
Confidence 999985 58999999999999999999999999888 77889999999999988887765443211 1111
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.++....+.+.+-....++. ..+...+|+.++|..||.+|++++++++|.||..
T Consensus 267 ~ePl~~~~~rkv~n~~kp~~--kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 267 LEPLPKGQKRKVKNRLKPYV--KDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCCCCcchhhhhhhhccccc--CChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 12222222222222222222 2457789999999999999999999999999975
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=298.12 Aligned_cols=280 Identities=30% Similarity=0.452 Sum_probs=211.9
Q ss_pred eCCeEEE-EEEecccCceEEEEEEeCCCCceEEEEEEecccccc---------------hhhHHHHHHHHHhcccCCCCc
Q psy12288 26 FNFRYHV-IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---------------DTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 26 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+.++|.. .+.||+|+||.||+|.+..+++.||+|.+....... ..+.+|+.+++.+
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------- 77 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-------- 77 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC--------
Confidence 4568875 567999999999999999999999999886432221 1356899999998
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
.|+|++++++.+. .+.+.+++||++.+++.+.+... ..++...+..++.|++.||++||+. |++|+|
T Consensus 78 ------~h~~iv~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~d 144 (335)
T PTZ00024 78 ------KHENIMGLVDVYV----EGDFINLVMDIMASDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKW-YFMHRD 144 (335)
T ss_pred ------CCcceeeeeEEEe----cCCcEEEEEeccccCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-Ceeccc
Confidence 8899999999886 56789999999988999888654 3488999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------- 239 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------- 239 (393)
|+|+||+++.++ .++|+|||.+.....
T Consensus 145 l~~~nill~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~ 181 (335)
T PTZ00024 145 LSPANIFINSKG-------------------------------------------ICKIADFGLARRYGYPPYSDTLSKD 181 (335)
T ss_pred ccHHHeEECCCC-------------------------------------------CEEECCccceeeccccccccccccc
Confidence 999999997766 499999998865441
Q ss_pred -------CCCCCCCCCCCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 240 -------HFADEIQTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 240 -------~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
......++..|+|||.+.+.. ++.++|+|||||++|+|++|..||.+.+ ..+.+..+....+..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~------~~~~~~~i~~~~~~~~~ 255 (335)
T PTZ00024 182 ETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN------EIDQLGRIFELLGTPNE 255 (335)
T ss_pred ccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCch
Confidence 111234577899999987653 6899999999999999999999997665 45666777776665544
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+....... .+.+ .....+..... .....+..+.++|.+||..||++|||++|++.||||+..
T Consensus 256 ~~~~~~~~~~-~~~~------~~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 256 DNWPQAKKLP-LYTE------FTPRKPKDLKT-------IFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred hhCcchhhcc-cccc------cCcCCcccHHH-------hCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 3222111100 0000 00000000000 112345678899999999999999999999999999864
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=290.52 Aligned_cols=256 Identities=23% Similarity=0.385 Sum_probs=197.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHH-HHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVL-LKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~-l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .......|+.. ++.+ .|+|+++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~--------------~~~~iv~~~ 66 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSV--------------DCPYTVTFY 66 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHc--------------CCCCeeeee
Confidence 479999999999999999999999999999998875422 12334445554 3433 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+. .+...+++|||+++++.+++... ....+++..+..++.|++.||+|||++++++||||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~- 141 (283)
T cd06617 67 GALF----REGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG- 141 (283)
T ss_pred EEEe----cCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-
Confidence 9886 55679999999988887776542 2245889999999999999999999866899999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCCCCchhHHHhc--
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYRSVEVLIG-- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~~y~aPE~~~~-- 258 (393)
.++|+|||++....... ....++..|+|||.+.+
T Consensus 142 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 179 (283)
T cd06617 142 ------------------------------------------QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL 179 (283)
T ss_pred ------------------------------------------CEEEeecccccccccccccccccCCccccChhhcCCcc
Confidence 49999999987653322 23467889999999865
Q ss_pred --CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 259 --AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 259 --~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..++.++|+|||||++|+|++|+.||..... ....+..... +..+.
T Consensus 180 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~--~~~~~------------------------- 227 (283)
T cd06617 180 NQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-----PFQQLKQVVE--EPSPQ------------------------- 227 (283)
T ss_pred cccccCccccchhhHHHHHHHHhCCCCCCcccc-----CHHHHHHHHh--cCCCC-------------------------
Confidence 3468899999999999999999999954221 1112211111 11000
Q ss_pred CcchhHHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
++ ...+..+.++|.+||..+|.+||+++++++||||....
T Consensus 228 --------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 228 --------------LPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred --------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 00 22456788999999999999999999999999998765
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=296.20 Aligned_cols=285 Identities=25% Similarity=0.407 Sum_probs=215.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCC--CceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQD--KTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+|++.+.||+|+||.||+|.+..+ +..||+|.+.... ...+.+.+|+.+++.+. .|+|++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~~iv~~ 67 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-------------GHKNITCL 67 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-------------CCCChhee
Confidence 589999999999999999999888 8899999876422 12345677888888872 58899999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++...........+++++++++++|...+... ..+++..++.++.|++.||++||++ |++|+||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~-- 142 (332)
T cd07857 68 YDMDIVFPGNFNELYLYEELMEADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADC-- 142 (332)
T ss_pred eeeeeeccccCCcEEEEEecccCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCC--
Confidence 88765443344568899999998998888654 3588999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHH
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVL 256 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++...... .....+|..|+|||++
T Consensus 143 -----------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 181 (332)
T cd07857 143 -----------------------------------------ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIM 181 (332)
T ss_pred -----------------------------------------CEEeCcCCCceecccccccccccccCcccCccccCcHHH
Confidence 4999999998754321 1224678899999998
Q ss_pred hc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc-ccCCCCCeeecc
Q psy12288 257 IG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR-YFTPQGNFRRID 334 (393)
Q Consensus 257 ~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~ 334 (393)
.+ ..++.++|+||+|+++|+|++|++||...+ ....+..+....|..+.+.......... .+.. ...
T Consensus 182 ~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 250 (332)
T cd07857 182 LSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD------YVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR-----SLP 250 (332)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHH-----hcc
Confidence 76 467999999999999999999999997655 5567778888888766544332211100 0000 000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...... ........+..+.+++.+||+.||.+|||+.|++.||||+..+
T Consensus 251 ~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 251 NIPKKP-------FESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred ccCCcc-------hHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 000000 0001122457888999999999999999999999999998665
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=291.29 Aligned_cols=286 Identities=28% Similarity=0.422 Sum_probs=211.5
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
....++|++.++||+|++|.||+|.+..+++.||+|.++... .....+.+|+.+++.+ .|+|+
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~i 68 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL--------------NHRNI 68 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC--------------CCCCe
Confidence 344578999999999999999999999999999999987432 2234567899999998 78999
Q ss_pred eeccccceeec------CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 101 IRLLNDFKIYS------RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 101 ~~~~~~~~~~~------~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
+++.+.+.... ..+..+++++||+++++...+... ...++...+..++.|++.||+|||+. |++|+||+|+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~n 146 (302)
T cd07864 69 VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSN 146 (302)
T ss_pred eeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHH
Confidence 99888775322 123479999999988888877654 24589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQY 250 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y 250 (393)
|+++.++ .++|+|||.+....... ....++..|
T Consensus 147 ili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y 183 (302)
T cd07864 147 ILLNNKG-------------------------------------------QIKLADFGLARLYNSEESRPYTNKVITLWY 183 (302)
T ss_pred EEECCCC-------------------------------------------cEEeCcccccccccCCcccccccceeccCc
Confidence 9998766 49999999887553221 223457789
Q ss_pred chhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 251 RSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 251 ~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
+|||.+.+. .++.++|||||||++|+|++|++||...+ ....+..+.+..+..+...+........+......
T Consensus 184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T cd07864 184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ------ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPK 257 (302)
T ss_pred cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChhhcccccccccccccccc
Confidence 999998754 46889999999999999999999997654 45566666666555444332211111100000000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
. . ..+ ..... ....+..+.+++.+||..||.+|||+.++++||||
T Consensus 258 ~-~----~~~---~~~~~----~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 258 K-Q----YRR---RLREE----FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred c-c----ccc---chhhh----cCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0 0 000 00000 11235678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=284.61 Aligned_cols=249 Identities=21% Similarity=0.364 Sum_probs=201.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|+||.||++.+..+++.|++|.+... ......+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM--------------KHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC--------------CCCCeeeeEe
Confidence 599999999999999999999999999999988643 22335678899999998 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ..++.++||||+ ++++.+.+.......++...+..++.|++.|+++||++ +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~--- 138 (256)
T cd08218 67 SFE----ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDG--- 138 (256)
T ss_pred eec----CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCC---
Confidence 886 667899999999 77888888665444578899999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....+++.|+|||++.+..+
T Consensus 139 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 178 (256)
T cd08218 139 ----------------------------------------TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPY 178 (256)
T ss_pred ----------------------------------------CEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCC
Confidence 49999999887553321 22357888999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++++|++|+.||.... ..+.+..+ ..+..+
T Consensus 179 ~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~--~~~~~~------------------------------- 219 (256)
T cd08218 179 NNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKI--IRGSYP------------------------------- 219 (256)
T ss_pred CCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHH--hcCCCC-------------------------------
Confidence 999999999999999999999996432 11111111 111111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..+...+..+.++|.+||..+|.+||++.++++||||
T Consensus 220 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 --------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred --------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 1123456678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=293.74 Aligned_cols=282 Identities=30% Similarity=0.482 Sum_probs=218.6
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++++|++.+.||.|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|+|+++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~ 73 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL--------------RHENIIS 73 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc--------------CCCCeee
Confidence 467999999999999999999999999999999987532 22345677899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+.+.. .+...++++|++++++...+.. ..++...+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 74 ~~~~~~~---~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~- 145 (328)
T cd07856 74 LSDIFIS---PLEDIYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENC- 145 (328)
T ss_pred EeeeEec---CCCcEEEEeehhccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCC-
Confidence 9988752 3456889999998888777654 2378888899999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-CCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-AGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~ 261 (393)
.++|+|||.+...........++..|+|||.+.+ ..+
T Consensus 146 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 183 (328)
T cd07856 146 ------------------------------------------DLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKY 183 (328)
T ss_pred ------------------------------------------CEEeCccccccccCCCcCCCcccccccCceeeeccCCc
Confidence 4999999998766554445567889999998766 467
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc--ccccCCCCCeeeccCCCcc
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT--LRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 339 (393)
+.++|+||||+++|+|++|+.||.... .......+.+..|..|.++....... .+++.. .....+.
T Consensus 184 ~~~~Dv~slG~il~el~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 251 (328)
T cd07856 184 DVEVDIWSAGCIFAEMLEGKPLFPGKD------HVNQFSIITDLLGTPPDDVINTICSENTLRFVQS------LPKREPV 251 (328)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh------ccccCCC
Confidence 999999999999999999999997554 45566677788888887775532211 000000 0000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
... ......+..+.++|++||+.+|++|||+++++.||||...+
T Consensus 252 ~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 252 PFS-------EKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred cHH-------HHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence 000 00123457889999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=288.77 Aligned_cols=260 Identities=23% Similarity=0.353 Sum_probs=201.1
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.+. .|+|++++++
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-------------~h~ni~~~~~ 86 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-------------NHPNVVKFYG 86 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-------------CCCCeEEEEE
Confidence 457899999999999999999999999999999998765444566778888888873 6899999999
Q ss_pred cceeecC-CCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 106 DFKIYSR-NGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 106 ~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
.+..... .+...++||||+ +++|.+++.. .....+++..++.++.|++.||++||+. +++|+||||+||+++.++
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCC
Confidence 8875432 345789999999 6788776643 1224588999999999999999999998 999999999999997766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 166 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 202 (291)
T cd06639 166 -------------------------------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC 202 (291)
T ss_pred -------------------------------------------CEEEeecccchhcccccccccCccCCccccChhhhcC
Confidence 4999999988754321 223467889999999865
Q ss_pred C-----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 259 A-----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 259 ~-----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
. .++.++|+|||||++|+|++|+.||..... ...+..+.. +..+.
T Consensus 203 ~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~------~~~~~~~~~--~~~~~---------------------- 252 (291)
T cd06639 203 EQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP------VKTLFKIPR--NPPPT---------------------- 252 (291)
T ss_pred CCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH------HHHHHHHhc--CCCCC----------------------
Confidence 3 257899999999999999999999964331 111111110 11000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
...+...+..+.++|.+||..||++||++.|+++||||+
T Consensus 253 ---------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 253 ---------------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred ---------------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 001123345688999999999999999999999999995
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=293.96 Aligned_cols=256 Identities=26% Similarity=0.377 Sum_probs=201.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
++|++.++||.|++|.||+|.+..++..+|+|.+.... ...+.+..|+.+++.+ .|++++++++.
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 70 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC--------------KHPNIVGLYEA 70 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC--------------CCCceeEEEEE
Confidence 57999999999999999999999899999999886432 2345677899999998 79999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...++||||+ ++++.+.+.... ..+++..++.++.|++.||.|||++ +++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~---- 140 (280)
T cd06611 71 YF----YENKLWILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDG---- 140 (280)
T ss_pred Ee----cCCeEEEEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCC----
Confidence 87 567899999999 667776665432 4589999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc----
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG---- 258 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~---- 258 (393)
.++|+|||++...... .....++..|++||.+..
T Consensus 141 ---------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 181 (280)
T cd06611 141 ---------------------------------------DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFK 181 (280)
T ss_pred ---------------------------------------CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccC
Confidence 4999999987654322 223457889999999863
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.+++.++|+||||+++|+|++|+.||...+. ...+..+. .+..|
T Consensus 182 ~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~------~~~~~~~~--~~~~~--------------------------- 226 (280)
T cd06611 182 DNPYDYKADIWSLGITLIELAQMEPPHHELNP------MRVLLKIL--KSEPP--------------------------- 226 (280)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCcccCCH------HHHHHHHh--cCCCC---------------------------
Confidence 3467899999999999999999999965431 11111110 01100
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+...+..+.++|.+||..||.+||++.++++||||++..+
T Consensus 227 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (280)
T cd06611 227 ----------TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSD 270 (280)
T ss_pred ----------CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccch
Confidence 00112334567889999999999999999999999999998654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=286.23 Aligned_cols=248 Identities=26% Similarity=0.402 Sum_probs=195.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+|++.+.||+|+||.||+|.. .+++.+|+|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~ 65 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL--------------KHVNIV 65 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc--------------CCCCEe
Confidence 488899999999999999976 4788899998764321 124577899999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+. .....++++||+ +++|.+++.+. ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.+
T Consensus 66 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~ 138 (265)
T cd06631 66 QYLGTCL----DDNTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPN 138 (265)
T ss_pred eEeeEee----cCCeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCC
Confidence 9999887 567899999999 77888777654 3478999999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---------CCCCCCCCCCCc
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------HFADEIQTRQYR 251 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------~~~~~~~t~~y~ 251 (393)
+ .++|+|||.+..... ......++..|+
T Consensus 139 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (265)
T cd06631 139 G-------------------------------------------IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWM 175 (265)
T ss_pred C-------------------------------------------eEEeccchhhHhhhhccccccccccccccCCCcccc
Confidence 5 499999998765421 112345788999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||.+.+..++.++|+||||+++|+|++|..||...+. ......+....+..|
T Consensus 176 ~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~--------------------- 228 (265)
T cd06631 176 APEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR------LAAMFYIGAHRGLMP--------------------- 228 (265)
T ss_pred ChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh------HHHHHHhhhccCCCC---------------------
Confidence 99999988889999999999999999999999964321 111111111111111
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.++...+..+.++|++||..+|.+||++.|+++||||
T Consensus 229 ------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 229 ------------------RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ------------------CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 1224456778899999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-38 Score=283.47 Aligned_cols=250 Identities=25% Similarity=0.377 Sum_probs=201.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.+|+|.+.... .....+.+|+.+++.+ .|++++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL--------------SHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC--------------CCCchhheee
Confidence 5899999999999999999999999999999886432 2245677899999998 7899999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++|||++ +++|.+.+.......+++..+..++.|++.|+++||++ |++|+||+|+||+++.++.
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~-- 139 (256)
T cd08220 67 NFL----EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKM-- 139 (256)
T ss_pred eEe----cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCC--
Confidence 776 567899999999 77888888765445588999999999999999999998 9999999999999975542
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+..++
T Consensus 140 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (256)
T cd08220 140 ----------------------------------------VVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYN 179 (256)
T ss_pred ----------------------------------------EEEEccCCCceecCCCccccccccCCcccCchhccCCCCC
Confidence 4899999998765432 2234678899999999988889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|+.||...+.. .....+.. +.
T Consensus 180 ~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~~~--~~---------------------------------- 217 (256)
T cd08220 180 QKSDIWALGCVLYELASLKRAFEAANLP------ALVLKIMS--GT---------------------------------- 217 (256)
T ss_pred cccchHHHHHHHHHHHhCCCCcccCchH------HHHHHHHh--cC----------------------------------
Confidence 9999999999999999999999654421 11111110 00
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...++...+..+.+++.+||..||.+|||+.|+++||||
T Consensus 218 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 218 -----FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -----CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 001223456678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=288.96 Aligned_cols=258 Identities=22% Similarity=0.375 Sum_probs=199.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.+. .|+|++++++.
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-------------~h~~i~~~~~~ 83 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-------------DHPNVVKFYGM 83 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-------------cCCCeeeeeee
Confidence 46899999999999999999999999999999988754444466788999888883 58999999987
Q ss_pred ceeec-CCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 107 FKIYS-RNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 107 ~~~~~-~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.... ..+...++||||+ +++|.+.+.. .....+++..+..++.|++.||.|||+. +++||||||+||+++.++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~- 161 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEG- 161 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCC-
Confidence 75332 2456799999999 7788776642 1223478889999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~- 258 (393)
.++|+|||++...... .....++..|+|||++..
T Consensus 162 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 199 (286)
T cd06638 162 ------------------------------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACE 199 (286)
T ss_pred ------------------------------------------CEEEccCCceeecccCCCccccccCCCcccChhhhchh
Confidence 3999999998765322 223468899999999853
Q ss_pred ----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 259 ----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 259 ----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
..++.++|+||+||++|+|++|+.||...... .. ........+.
T Consensus 200 ~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~------~~---~~~~~~~~~~----------------------- 247 (286)
T cd06638 200 QQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM------RA---LFKIPRNPPP----------------------- 247 (286)
T ss_pred hhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh------HH---HhhccccCCC-----------------------
Confidence 34788999999999999999999999654311 11 1010000000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+...+..+.++|.+||..||.+|||+.|+++|+||
T Consensus 248 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 -------------TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred -------------cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 000112234578899999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG0607|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=280.46 Aligned_cols=270 Identities=24% Similarity=0.374 Sum_probs=212.9
Q ss_pred eCCeEEEE-EEecccCceEEEEEEeCCCCceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVI-RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
|.+-|++. +.||+|+|+.|-.|....++..+|||++.+.+.. +.++.+|++++... ++|+||+.+
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C-------------qgh~nilqL 141 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC-------------QGHKNILQL 141 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh-------------cCCccHHHH
Confidence 34456654 4789999999999999999999999999766543 56788999999988 499999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.|. ++..+|+|||-+ ||.++..+.... .|++.++.++..+|+.||.|||.+ ||.||||||+|||-.....
T Consensus 142 iefFE----dd~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 142 IEFFE----DDTRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNK 214 (463)
T ss_pred HHHhc----ccceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCC
Confidence 99998 778899999999 899999998774 499999999999999999999999 9999999999999754331
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc--c--------CCCCCCCCCCCCch
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--D--------DHFADEIQTRQYRS 252 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~--~--------~~~~~~~~t~~y~a 252 (393)
-..+|+|||.+..-. + ....+.+|+..|||
T Consensus 215 ----------------------------------------vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMA 254 (463)
T KOG0607|consen 215 ----------------------------------------VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMA 254 (463)
T ss_pred ----------------------------------------cCceeeeccccccccccCCCCCCCCCccccCcccchhhcc
Confidence 013899999765432 1 12334578889999
Q ss_pred hHHHhc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 253 VEVLIG-----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 253 PE~~~~-----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
||+..- ..|..++|.|||||++|-|++|++||.+.-..+..=
T Consensus 255 PEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW--------------------------------- 301 (463)
T KOG0607|consen 255 PEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW--------------------------------- 301 (463)
T ss_pred hhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc---------------------------------
Confidence 999753 247899999999999999999999997665432210
Q ss_pred CCeeeccCCC---cchhHHHHhhhccCCh----hhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 328 GNFRRIDNLK---PWGLYQVLTEKYHWSK----AEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 328 ~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.+...+. ..-+..+...+++||. ..+.+..|+++.+|..||.+|.++.++++|||+..+..
T Consensus 302 ---drGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 302 ---DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred ---cCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 0000000 1112234456666664 46889999999999999999999999999999987753
|
|
| >KOG0612|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=324.44 Aligned_cols=252 Identities=23% Similarity=0.396 Sum_probs=212.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec----ccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS----DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|.++++||+|+||.|.+++++.|++.+|.|++++ ......-|+.|-.+|..- +.+=|+.
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~--------------ns~Wiv~ 139 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG--------------NSEWIVQ 139 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC--------------CcHHHHH
Confidence 4789999999999999999999999999999999875 234456678888888776 6777888
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.-.|+ +..++|+||+|+ ||+|..++.+.. .++++.++++...|+.||.-||+- |+|||||||+|||+|..|
T Consensus 140 LhyAFQ----D~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 140 LHYAFQ----DERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred HHHHhc----CccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccC
Confidence 888888 788999999999 999999998875 599999999999999999999987 999999999999999888
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
. ++|+|||.+..+... ....+|||.|.+||++.
T Consensus 213 H-------------------------------------------ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLq 249 (1317)
T KOG0612|consen 213 H-------------------------------------------IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQ 249 (1317)
T ss_pred c-------------------------------------------EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHH
Confidence 4 999999998776532 34568999999999997
Q ss_pred c-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 258 G-----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 258 ~-----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
. +.|++.+|+||+||++|||+.|..||...+. -+....|+..
T Consensus 250 s~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl------veTY~KIm~h--------------------------- 296 (1317)
T KOG0612|consen 250 SQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL------VETYGKIMNH--------------------------- 296 (1317)
T ss_pred hhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH------HHHHHHHhch---------------------------
Confidence 4 4589999999999999999999999976652 2233333322
Q ss_pred ccCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCCCcC---HHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKLRAS---AADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt---~~ell~hp~~~~~ 389 (393)
++.+.|| ..+|.++.+||+++++ +|+.|.. ++++-.||||.++
T Consensus 297 -------------k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 297 -------------KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred -------------hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 1223344 4578899999999988 8999998 9999999999986
|
|
| >KOG0690|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=287.55 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=213.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc----hhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|+.+++||+|+||.|-+|+.+.+++.+|||++++.-... ..-..|.++|+.. .||.+..+
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~--------------~HPFLt~L 233 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC--------------RHPFLTSL 233 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc--------------cCcHHHHh
Confidence 57889999999999999999999999999999998754332 2234577888887 88888888
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
--+|+ ..+.+|.||||. ||.|+-.+.+. ..++++..+.+...|+.||.|||++ +||.||||.+|.|+|.|+.
T Consensus 234 KYsFQ----t~drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGH 306 (516)
T KOG0690|consen 234 KYSFQ----TQDRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGH 306 (516)
T ss_pred hhhhc----cCceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCc
Confidence 88888 778899999999 88888777665 3499999999999999999999998 9999999999999999984
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
+|++|||++..- +......+|||.|.|||++...
T Consensus 307 -------------------------------------------IKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDn 343 (516)
T KOG0690|consen 307 -------------------------------------------IKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDN 343 (516)
T ss_pred -------------------------------------------eEeeecccchhcccccceeccccCChhhcCchhhccc
Confidence 999999998743 4556788999999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.|++++|.|.+||++|||++|+.||....... .
T Consensus 344 DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k------L----------------------------------------- 376 (516)
T KOG0690|consen 344 DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK------L----------------------------------------- 376 (516)
T ss_pred cccceeehhhhhHHHHHHHhccCcccccchhH------H-----------------------------------------
Confidence 99999999999999999999999997544211 1
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
..-++-+...||...++++..|+..+|..||.+|+. |.|+.+|+||+++
T Consensus 377 -FeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 377 -FELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred -HHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 112334455677888899999999999999999984 8999999999876
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=287.69 Aligned_cols=279 Identities=30% Similarity=0.476 Sum_probs=210.4
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|.+..+++.+|+|.+.... .....+.+|+.+++.+ .|+|++++.+.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL--------------RHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc--------------cCCCeeeheee
Confidence 688999999999999999999999999999987542 2334577899999998 78999999988
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+... .....++|+||+++++...+.... ..+++..+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~--~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~----- 137 (287)
T cd07840 67 VTSK--GKGSIYMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDG----- 137 (287)
T ss_pred EecC--CCCcEEEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCC-----
Confidence 8621 136899999999888888876543 3588999999999999999999998 999999999999998776
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcC-CC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++++|||.+...... .....++..|+|||.+.+. .+
T Consensus 138 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 179 (287)
T cd07840 138 --------------------------------------VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRY 179 (287)
T ss_pred --------------------------------------CEEEccccceeeccCCCcccccccccccccCCceeeEccccC
Confidence 4999999998765433 2334567889999987654 57
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||||+++|+|++|+.||...+ ....+..+....+..+...+...... .. ...... ....
T Consensus 180 ~~~~Dv~slG~~l~el~t~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~--~~~~ 244 (287)
T cd07840 180 GPEVDMWSVGCILAELFLGKPIFQGST------ELEQLEKIFELCGSPTDENWPGVSKL-PW------FENLKP--KKPY 244 (287)
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchhhccccccc-hh------hhhccc--cccc
Confidence 899999999999999999999997655 44555666665555444332221111 00 000000 0000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...+.... ...++..+.+++++||..||.+||+++++++||||
T Consensus 245 ~~~~~~~~--~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 245 KRRLREFF--KHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhHHHHHh--cccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11111111 12246789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=288.09 Aligned_cols=243 Identities=13% Similarity=0.145 Sum_probs=193.6
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
..||+|++|.||+|.. +++.||||.++..... .+.+.+|+.+|+.+ .|+|++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~nIv~~~g~~~~ 89 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI--------------DSNNILKIYGFIID 89 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc--------------CCCCEEEEeeeEEe
Confidence 5789999999999976 6889999998754332 35567999999999 89999999998864
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
........++||||+ +|+|.+.+... ..++......++.|++.|+++||+..+++||||||+||+++.++
T Consensus 90 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~------- 160 (283)
T PHA02988 90 IVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY------- 160 (283)
T ss_pred cccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC-------
Confidence 333456789999999 77888887654 34888899999999999999999744899999999999998776
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc--CCCCchhh
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG--AGYGPAAD 266 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~D 266 (393)
.+|++|||++...........++..|+|||++.+ ..++.++|
T Consensus 161 ------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~D 204 (283)
T PHA02988 161 ------------------------------------KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDD 204 (283)
T ss_pred ------------------------------------cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhh
Confidence 4999999998866555556678999999999976 57899999
Q ss_pred HHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHh
Q psy12288 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLT 346 (393)
Q Consensus 267 iwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (393)
||||||++|+|++|+.||...+ .......+.....
T Consensus 205 i~SlGvil~el~~g~~Pf~~~~------~~~~~~~i~~~~~--------------------------------------- 239 (283)
T PHA02988 205 IYSLGVVLWEIFTGKIPFENLT------TKEIYDLIINKNN--------------------------------------- 239 (283)
T ss_pred hhHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcCC---------------------------------------
Confidence 9999999999999999997543 1122111111000
Q ss_pred hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 347 EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 347 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...++...+..+.+||.+||+.||.+|||++++++.
T Consensus 240 -~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 240 -SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred -CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 011223456788999999999999999999999864
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=286.10 Aligned_cols=247 Identities=28% Similarity=0.431 Sum_probs=197.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----------chhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----------ADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
+|.+...||+|++|.||+|.+..+++.+|+|.+...... .+.+.+|+.+++.+ .|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ 66 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL--------------QHE 66 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc--------------CCC
Confidence 478889999999999999999989999999987643221 14567888999998 899
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+++++++.+. ...+.+++|||+ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||++
T Consensus 67 ~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~ 139 (267)
T cd06628 67 NIVQYLGSSL----DADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILV 139 (267)
T ss_pred CeeeEEEEEE----eCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEE
Confidence 9999998876 566889999999 67888877654 3488899999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---------CCCCCCCC
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------FADEIQTR 248 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------~~~~~~t~ 248 (393)
+.++ .++|+|||.+...... .....++.
T Consensus 140 ~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (267)
T cd06628 140 DNKG-------------------------------------------GIKISDFGISKKLEANSLSTKTNGARPSLQGSV 176 (267)
T ss_pred cCCC-------------------------------------------CEEecccCCCcccccccccCCccccccccCCCc
Confidence 7666 4999999988765421 11234678
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
.|+|||.+.+..++.++|+||||+++|+|++|+.||...+. . ..+.......
T Consensus 177 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~---~~~~~~~~~~------------------- 228 (267)
T cd06628 177 FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ------L---QAIFKIGENA------------------- 228 (267)
T ss_pred CccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH------H---HHHHHHhccC-------------------
Confidence 89999999988889999999999999999999999975431 1 1111111100
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...++...+..+.++|++||+.||.+||++.|+++||||
T Consensus 229 -------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 -------------------SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred -------------------CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 001223456788899999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=287.31 Aligned_cols=276 Identities=30% Similarity=0.494 Sum_probs=210.7
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|.+..+++.+++|.+..... ....+.+|+.+++.+ .|++++++++.
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL--------------NHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh--------------cCCCcchHHHh
Confidence 6778999999999999999998999999998864322 245677899999998 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...++++||+++++...+.... ..++...+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~~v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~----- 135 (283)
T cd05118 67 FR----HKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEG----- 135 (283)
T ss_pred hc----cCCCEEEEEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCC-----
Confidence 87 567899999999889888876643 4589999999999999999999998 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~ 262 (393)
.++++|||.+...... .....++..|+|||.+.+. .++
T Consensus 136 --------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~ 177 (283)
T cd05118 136 --------------------------------------VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYS 177 (283)
T ss_pred --------------------------------------cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCC
Confidence 4999999988765432 2234577889999999876 679
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|+.||...+ ..+.+..+....+......+........... ...........
T Consensus 178 ~~~Di~slG~~l~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~- 245 (283)
T cd05118 178 TPVDIWSVGCIFAELLSRRPLFPGKS------EIDQLFKIFRTLGTPDPEVWPKFTSLARNYK-----FSFPKKAGMPL- 245 (283)
T ss_pred chhHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCchHhcccchhhhhhhh-----hhhccccccCH-
Confidence 99999999999999999999997655 3444555555444433333222211100000 00000000000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......+..+.++|.+||..||.+||++++++.||||
T Consensus 246 ------~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 246 ------PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred ------HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 01123457889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=284.54 Aligned_cols=253 Identities=26% Similarity=0.438 Sum_probs=200.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+|+..+.||+|++|.||+|.+..+++.||+|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv 66 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL--------------NHPHII 66 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc--------------CCCcee
Confidence 47888999999999999999999999999998864321 235678899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .+...++||||+ +++|.+.+... ..+++..+..++.|++.||++||++ |++|+||+|+||+++.+
T Consensus 67 ~~~~~~~----~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~ 139 (268)
T cd06630 67 RMLGATC----EDSHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDST 139 (268)
T ss_pred hhhceec----cCCeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC
Confidence 9999887 667899999999 67887777654 3488999999999999999999998 99999999999999755
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aP 253 (393)
+. .++|+|||.+...... .....++..|+||
T Consensus 140 ~~------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~P 177 (268)
T cd06630 140 GQ------------------------------------------RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAP 177 (268)
T ss_pred CC------------------------------------------EEEEcccccccccccccccCCccccccccccceeCH
Confidence 42 4899999988765432 1123568899999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|.+.+..++.++|+||+|+++++|++|..||....... ....+......
T Consensus 178 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~------------------------- 226 (268)
T cd06630 178 EVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN------HLALIFKIASA------------------------- 226 (268)
T ss_pred hHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc------hHHHHHHHhcc-------------------------
Confidence 99988888999999999999999999999996433211 11111110000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
.....++...+..+.+++.+||..+|.+|||+.++++||||+
T Consensus 227 ------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 ------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 001123345667888999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=285.02 Aligned_cols=250 Identities=26% Similarity=0.420 Sum_probs=201.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|++|.||+|.+..++..+++|.+..... .+.+.+|+.+++.+ .|+|++++.+.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l--------------~~~~i~~~~~~~ 67 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC--------------DSPYIVKYYGSY 67 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC--------------CCCcEeeeeeee
Confidence 579999999999999999999998899999999876543 57788999999998 899999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+.+.++++|++ +++|.+.+.... ..+++..+..++.|++.|+++||+. +++|+||+|+||+++.++
T Consensus 68 ~----~~~~~~l~~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~----- 136 (256)
T cd06612 68 F----KNTDLWIVMEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEG----- 136 (256)
T ss_pred e----cCCcEEEEEecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCC-----
Confidence 7 567899999999 567777765432 4588999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++....... ....++..|+|||.+.+..++.
T Consensus 137 --------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~ 178 (256)
T cd06612 137 --------------------------------------QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNN 178 (256)
T ss_pred --------------------------------------cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCc
Confidence 49999999987654322 2234688999999999888999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++||||||+++|+|++|+.||....... . ........+
T Consensus 179 ~~Di~s~G~il~~l~~g~~p~~~~~~~~------~---~~~~~~~~~--------------------------------- 216 (256)
T cd06612 179 KADIWSLGITAIEMAEGKPPYSDIHPMR------A---IFMIPNKPP--------------------------------- 216 (256)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCcchhh------h---hhhhccCCC---------------------------------
Confidence 9999999999999999999996433110 0 000000000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.....+...+..+.++|.+||..||.+|||+.|+++||||
T Consensus 217 ---~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 217 ---PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ---CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 0001122345678899999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=285.44 Aligned_cols=268 Identities=24% Similarity=0.327 Sum_probs=204.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|+..++||.|++|.||+|.+..+++.+|+|.+..... ....+.+|+++++.+ .|+|++++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~ 66 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC--------------KSPYIVKYYG 66 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC--------------CCCCeeeeee
Confidence 479999999999999999999999999999998875422 345678899999998 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+... ....+++||||+ +++|.+.+.. .....++...+..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~- 142 (287)
T cd06621 67 AFLDE--SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKG- 142 (287)
T ss_pred EEEcc--CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCC-
Confidence 87532 345689999999 6788776543 2234478899999999999999999998 999999999999997765
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+..+
T Consensus 143 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~ 180 (287)
T cd06621 143 ------------------------------------------QVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPY 180 (287)
T ss_pred ------------------------------------------eEEEeeccccccccccccccccCCccccCHHHhcCCCC
Confidence 4999999998654332 223456888999999998889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... ........ ......+....
T Consensus 181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~---~~~~~~~~~~~--------------------------- 229 (287)
T cd06621 181 SITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLS---YIVNMPNPELK--------------------------- 229 (287)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHH---HHhcCCchhhc---------------------------
Confidence 999999999999999999999997553211 11111111 11110000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.........+..+.++|.+||..||.+|||+.|+++||||++...
T Consensus 230 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 230 -----DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred -----cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 000000123567889999999999999999999999999987754
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=284.78 Aligned_cols=281 Identities=29% Similarity=0.470 Sum_probs=208.6
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|+||.||+|.+..+++.||+|.+..... ....+.+|+.+++.+.. ..|++++++.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~-----------~~h~~i~~~~~~ 69 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES-----------FEHPNIVRLLDV 69 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc-----------cCCCCcceEEEE
Confidence 7889999999999999999998899999999874322 22345678888877732 158999999999
Q ss_pred ceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+..... .....+++||++++++.+.+.......+++..+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 70 ~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~---- 144 (287)
T cd07838 70 CHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDG---- 144 (287)
T ss_pred EeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCC----
Confidence 874332 22358999999988888888765444689999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||.+...... .....++..|+|||.+.+..++.
T Consensus 145 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~ 185 (287)
T cd07838 145 ---------------------------------------QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYAT 185 (287)
T ss_pred ---------------------------------------CEEEeccCcceeccCCcccccccccccccChHHhccCCCCC
Confidence 4999999988765332 22345688899999999888999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||||+++|+|++|.+||...+ ..+.+..+....+......+........ .........
T Consensus 186 ~~Di~s~G~~l~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~---- 247 (287)
T cd07838 186 PVDMWSVGCIFAELFRRRPLFRGTS------EADQLDKIFDVIGLPSEEEWPRNVSLPR--------SSFPSYTPR---- 247 (287)
T ss_pred cchhhhHHHHHHHHHhCCCcccCCC------hHHHHHHHHHHcCCCChHhcCCCcccch--------hhccccccc----
Confidence 9999999999999999999997655 3445555555443322111100000000 000000000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.........+..+.++|.+||..||.+||+++|++.||||
T Consensus 248 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 248 ---SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ---chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0011113456788899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=282.03 Aligned_cols=253 Identities=26% Similarity=0.363 Sum_probs=200.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.++|++.+.||.|++|.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|++++++++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~ 67 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC--------------RHPNIVAYFG 67 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC--------------CCCChhceEE
Confidence 358999999999999999999999999999999887542 2346778899999998 8999999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+..++++|||+ ++++.+.+... ...+++..+..++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 68 ~~~----~~~~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~--- 138 (262)
T cd06613 68 SYL----RRDKLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDG--- 138 (262)
T ss_pred EEE----eCCEEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCC---
Confidence 876 567799999999 55666666543 24589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC--
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-- 259 (393)
.++|+|||.+...... .....++..|+|||.+.+.
T Consensus 139 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~ 178 (262)
T cd06613 139 ----------------------------------------DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERK 178 (262)
T ss_pred ----------------------------------------CEEECccccchhhhhhhhccccccCCccccCchhhccccc
Confidence 4999999988765432 2334678889999999876
Q ss_pred -CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 -~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.++.++|+||||+++|+|++|+.||...+. ......... .+..+.
T Consensus 179 ~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~------~~~~~~~~~-~~~~~~--------------------------- 224 (262)
T cd06613 179 GGYDGKCDIWALGITAIELAELQPPMFDLHP------MRALFLISK-SNFPPP--------------------------- 224 (262)
T ss_pred CCcCchhhhHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-ccCCCc---------------------------
Confidence 788999999999999999999999975441 111111100 000000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
........+..+.++|++||..||.+|||+++++.|||
T Consensus 225 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 ---------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ---------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00011344567889999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=287.58 Aligned_cols=277 Identities=30% Similarity=0.479 Sum_probs=211.5
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcc-cccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQA-SEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~-~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|....+++.|+||.+...... .....+|+..++.+ . |++++++++.
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~h~~i~~~~~~ 66 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL--------------NEHPNIVKLKEV 66 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhc--------------cCCCCchhHHHH
Confidence 67889999999999999999989999999988654321 22334677778777 5 8999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .+...++|||++++++.+.+.......++...+..++.|++.||.|||++ |++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~----- 136 (283)
T cd07830 67 FR----ENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPE----- 136 (283)
T ss_pred hh----cCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCC-----
Confidence 87 57789999999999999888776544589999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhc-CCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG-AGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~ 263 (393)
.++|+|||.+...... .....++..|+|||.+.+ ..++.
T Consensus 137 --------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 178 (283)
T cd07830 137 --------------------------------------VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSS 178 (283)
T ss_pred --------------------------------------CEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCC
Confidence 4999999998765432 234467889999998854 44789
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||||+++++|++|++||+..+ ..+.+..+....+..+...+............ ........
T Consensus 179 ~~Di~s~G~~l~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---- 243 (283)
T cd07830 179 PVDIWALGCIMAELYTLRPLFPGSS------EIDQLYKICSVLGTPTKQDWPEGYKLASKLGF-----RFPQFAPT---- 243 (283)
T ss_pred ccchhhHHHHHHHHHhCCCccCCCC------hHHHHHHHHHhcCCCChhhhhhHhhhhccccc-----cccccccc----
Confidence 9999999999999999999997765 45566677777777655443332211111100 00000000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+... ....+..+.++|++||..||++|||++|++.||||
T Consensus 244 ~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 244 SLHQL---IPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cHHHH---cccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00110 11225778899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=281.33 Aligned_cols=249 Identities=26% Similarity=0.386 Sum_probs=203.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|+||.||.+.+..+++.+++|.+... ......+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL--------------QHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC--------------CCCCeeEEEe
Confidence 599999999999999999999999999999987643 23345677899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....+++|||+ +++|.+.+.......++...+..++.|++.|+++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~--- 138 (256)
T cd08221 67 HFM----DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAG--- 138 (256)
T ss_pred EEe----cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCC---
Confidence 987 567899999999 78998888765445588999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....+++.|+|||.+.+..+
T Consensus 139 ----------------------------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~ 178 (256)
T cd08221 139 ----------------------------------------LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKY 178 (256)
T ss_pred ----------------------------------------CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCC
Confidence 49999999887553322 34567899999999988888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||.... .......+.. +..+.
T Consensus 179 ~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~~--~~~~~------------------------------ 220 (256)
T cd08221 179 NFKSDIWALGCVLYELLTLKRTFDATN------PLNLVVKIVQ--GNYTP------------------------------ 220 (256)
T ss_pred CCcchhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc--CCCCC------------------------------
Confidence 999999999999999999999996543 1222222211 11100
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+...+..+.++|.+||..+|.+||++.++++|||+
T Consensus 221 ---------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 ---------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ---------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 112345678899999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=292.35 Aligned_cols=253 Identities=25% Similarity=0.386 Sum_probs=199.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+.|.....||+|+||.||++.+..++..||||.+.... ...+.+.+|+.+++.+ .|+|++++++
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~ii~~~~ 86 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY--------------HHENVVDMYN 86 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC--------------CCCcHHHHHH
Confidence 456777889999999999999999999999999886432 2345577899999888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+++.++||||+ ++++.+.+.. ..++++++..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 87 ~~~----~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~--- 155 (292)
T cd06658 87 SYL----VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDG--- 155 (292)
T ss_pred hee----cCCeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCC---
Confidence 887 567899999999 5566665533 3488999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+..+
T Consensus 156 ----------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 195 (292)
T cd06658 156 ----------------------------------------RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPY 195 (292)
T ss_pred ----------------------------------------CEEEccCcchhhcccccccCceeecCccccCHHHHccCCC
Confidence 4999999988654322 223457889999999988889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||...+ ....+..+... .+.
T Consensus 196 ~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~---~~~------------------------------ 236 (292)
T cd06658 196 GTEVDIWSLGIMVIEMIDGEPPYFNEP------PLQAMRRIRDN---LPP------------------------------ 236 (292)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhc---CCC------------------------------
Confidence 999999999999999999999997543 11111111111 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
........+..+.+++.+||..||.+|||++|+++||||+..
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 237 ------RVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred ------ccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 000112345678899999999999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=281.76 Aligned_cols=251 Identities=27% Similarity=0.409 Sum_probs=196.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|+||.||.|.+..++..||+|.+..... ....+.+|+.+++.+ .|++++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~ 67 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL--------------LHERIV 67 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc--------------CCCCee
Confidence 379999999999999999999999999999998753221 124567799999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+.. .....++++|||+ +++|.+.+... ..++...+..++.|++.||++||++ +++|+||+|+||+++.+
T Consensus 68 ~~~~~~~~--~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~ 142 (265)
T cd06652 68 QYYGCLRD--PMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSV 142 (265)
T ss_pred eEEeEecc--CCCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCC
Confidence 99887652 1245688999999 67888877654 3478889999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------CCCCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~t~~y~aPE 254 (393)
+ .++|+|||.+..... ......++..|+|||
T Consensus 143 ~-------------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (265)
T cd06652 143 G-------------------------------------------NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPE 179 (265)
T ss_pred C-------------------------------------------CEEECcCccccccccccccccccccCCCCccccChh
Confidence 5 499999998875432 122345788999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|+.||.... . ...+........
T Consensus 180 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------~---~~~~~~~~~~~~------------------------ 226 (265)
T cd06652 180 VISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE------A---MAAIFKIATQPT------------------------ 226 (265)
T ss_pred hhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc------h---HHHHHHHhcCCC------------------------
Confidence 9988888999999999999999999999996432 1 111111111100
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
....+...+..+.++|++|+. +|.+||+++|+++|||++
T Consensus 227 -------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 227 -------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred -------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 001234456678899999995 999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG0579|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=306.55 Aligned_cols=258 Identities=25% Similarity=0.359 Sum_probs=211.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec-ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS-DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+-|.|+..||.|+||.||+|.++.++-..|.|++.. +....+.+.-|+.+|..+ .||+|+++++
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C--------------dHP~ivkLl~ 96 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC--------------DHPVIVKLLS 96 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC--------------CChHHHHHHH
Confidence 3468899999999999999999999998899998763 344567788899999999 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.|. ..+.+||..|+|+|+-.+.+.-.-...+.++++..++.|++.||.|||++ +|+|||||..|||+..|+.
T Consensus 97 ayy----~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGd--- 168 (1187)
T KOG0579|consen 97 AYY----FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGD--- 168 (1187)
T ss_pred HHh----ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCc---
Confidence 998 56679999999966555555444446699999999999999999999999 9999999999999999985
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhc----
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIG---- 258 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~---- 258 (393)
++|+|||.+.... ......+|||+|||||+...
T Consensus 169 ----------------------------------------irLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~K 208 (1187)
T KOG0579|consen 169 ----------------------------------------IRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFK 208 (1187)
T ss_pred ----------------------------------------EeeecccccccchhHHhhhccccCCcccccchheeecccc
Confidence 9999999876442 23456789999999999753
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.+|..++||||||+++.+|..+.+|-...+++ ..+.++.-.-|+.+
T Consensus 209 D~PYDykaDiWSlGITLIEMAqiEPPHhelnpM---------RVllKiaKSePPTL------------------------ 255 (1187)
T KOG0579|consen 209 DQPYDYKADIWSLGITLIEMAQIEPPHHELNPM---------RVLLKIAKSEPPTL------------------------ 255 (1187)
T ss_pred CCCchhhhhHHhhhhHHHHHhccCCCccccchH---------HHHHHHhhcCCCcc------------------------
Confidence 57899999999999999999999998766632 22222222222211
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
-.|+.-+..|.||+.+||..||..||++.|+++||||.+.-+
T Consensus 256 ------------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 256 ------------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred ------------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 123455678899999999999999999999999999987654
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=284.78 Aligned_cols=250 Identities=24% Similarity=0.368 Sum_probs=194.4
Q ss_pred CeEEEEEEe--cccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKL--GWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.+ |+|+||.||++.+..++..+|+|.+...... ..|+.....+ ..|+|++++++
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~-------------~~h~~iv~~~~ 76 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLM-------------KDNPNFIKLYY 76 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHh-------------hcCCCEEEEEE
Confidence 467777776 9999999999999999999999998753211 1233333322 16899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .++..++||||+ +++|.+++.... .++++++..++.|++.||++||+. |++|+||+|+||+++.++.
T Consensus 77 ~~~----~~~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~-- 147 (267)
T PHA03390 77 SVT----TLKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKD-- 147 (267)
T ss_pred EEe----cCCeeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCC--
Confidence 887 556899999999 789998887653 589999999999999999999998 9999999999999976652
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++++|||.+...... ....++..|+|||++.+..++.+
T Consensus 148 ----------------------------------------~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~ 186 (267)
T PHA03390 148 ----------------------------------------RIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVS 186 (267)
T ss_pred ----------------------------------------eEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCch
Confidence 4899999988765433 23457889999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+||+|+++|+|++|+.||........ .... .....
T Consensus 187 ~DvwslG~il~~l~~g~~p~~~~~~~~~--~~~~---~~~~~-------------------------------------- 223 (267)
T PHA03390 187 FDWWAVGVLTYELLTGKHPFKEDEDEEL--DLES---LLKRQ-------------------------------------- 223 (267)
T ss_pred hhHHHHHHHHHHHHHCCCCCCCCCcchh--hHHH---HHHhh--------------------------------------
Confidence 9999999999999999999974432211 0000 00000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcC-HHHHhcCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-AADCLRHPWLNP 388 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~ell~hp~~~~ 388 (393)
..........+..+.+||.+||+.||.+||+ ++|+++||||++
T Consensus 224 -~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 224 -QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred -cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 0111122356678899999999999999996 699999999985
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=288.77 Aligned_cols=254 Identities=21% Similarity=0.327 Sum_probs=199.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||++.+..+++.|++|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~ 66 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA--------------ENPFVVSM 66 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC--------------CCCCeeee
Confidence 36999999999999999999999999999999887542 1234566888888887 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+.++++|||++ +++|.+.+... ..+++..+..++.|++.|++|||++ +++|+||||+||+++.++
T Consensus 67 ~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~- 138 (305)
T cd05609 67 FCSFE----TKRHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMG- 138 (305)
T ss_pred EEEEe----cCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCC-
Confidence 98886 667899999999 67888777654 3488999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------------------CCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------------FADE 244 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------------~~~~ 244 (393)
.++|+|||.+...... ....
T Consensus 139 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (305)
T cd05609 139 ------------------------------------------HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQV 176 (305)
T ss_pred ------------------------------------------CEEEeeCCCccccCcCccccccccccccchhhccccCC
Confidence 4999999987531100 0112
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
.++..|+|||.+....++.++|+||||+++|+|++|..||.+.+. ...+..+.......|.
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~------------- 237 (305)
T cd05609 177 CGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP------EELFGQVISDDIEWPE------------- 237 (305)
T ss_pred ccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcccCCCC-------------
Confidence 467789999999888899999999999999999999999965431 1111111110000000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC---HHHHhcCCCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~ell~hp~~~~~~ 390 (393)
.....+..+.++|.+||..||++||+ +.++++||||....
T Consensus 238 --------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 238 --------------------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred --------------------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 01134567889999999999999998 79999999997653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=286.68 Aligned_cols=252 Identities=25% Similarity=0.338 Sum_probs=195.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|++++++++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~ii~~~~ 73 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC--------------KHCNIVAYFG 73 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc--------------CCCCeeeeeE
Confidence 458999999999999999999999999999999987432 2234567899999988 8899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|.+.+... ..+++..+..++.|++.|+.|||+. |++|+||+|+||+++.++
T Consensus 74 ~~~----~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~--- 143 (267)
T cd06646 74 SYL----SREKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNG--- 143 (267)
T ss_pred EEE----eCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCC---
Confidence 886 556789999999 56777777544 3488999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc---
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG--- 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~--- 258 (393)
.++|+|||++...... .....++..|+|||.+..
T Consensus 144 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 183 (267)
T cd06646 144 ----------------------------------------DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKN 183 (267)
T ss_pred ----------------------------------------CEEECcCccceeecccccccCccccCccccCHhHcccccC
Confidence 4999999998765322 223467889999999853
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+||+||++|+|++|+.||........ ...+... ...+
T Consensus 184 ~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~------~~~~~~~-~~~~---------------------------- 228 (267)
T cd06646 184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMSKS-NFQP---------------------------- 228 (267)
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCCccccchhhh------heeeecC-CCCC----------------------------
Confidence 3478899999999999999999999854331110 0000000 0000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
.........+..+.++|++||..||++|||++++++|+|
T Consensus 229 --------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 229 --------PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --------CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 000011234568889999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=283.48 Aligned_cols=250 Identities=28% Similarity=0.424 Sum_probs=195.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|++.+.||+|+||.||+|.+..++..|++|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 68 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL--------------QHERIVQ 68 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc--------------CCCCeee
Confidence 6899999999999999999999999999999876432 1224567899999998 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+.. ..+...++++|++ +++|.+.+.... .++...+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 69 ~~~~~~~--~~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~ 143 (266)
T cd06651 69 YYGCLRD--RAEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAG 143 (266)
T ss_pred EEEEEEc--CCCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCC
Confidence 8887752 2346789999999 678888876543 488899999999999999999987 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~ 255 (393)
.++|+|||++...... .....++..|+|||.
T Consensus 144 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 180 (266)
T cd06651 144 -------------------------------------------NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEV 180 (266)
T ss_pred -------------------------------------------CEEEccCCCccccccccccCCccccCCccccccCHHH
Confidence 4999999988754321 122357888999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+..++.++|+||+||++|+|++|+.||..... ...+.......
T Consensus 181 ~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---------~~~~~~~~~~~-------------------------- 225 (266)
T cd06651 181 ISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---------MAAIFKIATQP-------------------------- 225 (266)
T ss_pred hCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---------HHHHHHHhcCC--------------------------
Confidence 9988889999999999999999999999964321 11111111100
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
....++...+..+.+++ +||..+|.+||+++|+++||||+
T Consensus 226 -----------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 226 -----------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred -----------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 00112233455677788 57778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=284.06 Aligned_cols=275 Identities=32% Similarity=0.520 Sum_probs=212.5
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
|++.+.||+|++|.||+|.+..+++.||+|.+... ....+.+..|+.+++.+ .|++++++.+.
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL--------------KHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc--------------CCCCHHHHHhh
Confidence 67789999999999999999999999999998764 23345667899999988 78999999998
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+. .....++|||+++++|.+.+.... ..++...+..++.|++.||++||++ |++|+||+|+||+++.++
T Consensus 67 ~~----~~~~~~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~----- 135 (282)
T cd07829 67 IH----TERKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDG----- 135 (282)
T ss_pred hh----cCCceEEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCC-----
Confidence 87 557899999999889998887653 3489999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+. .++
T Consensus 136 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 177 (282)
T cd07829 136 --------------------------------------VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYS 177 (282)
T ss_pred --------------------------------------CEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCC
Confidence 4999999988765332 2234457789999999876 689
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|++++|.+||...+ ....+..+....+......+....... .+.. .... ....
T Consensus 178 ~~~Dv~slG~~l~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~---~~~~--- 242 (282)
T cd07829 178 TAVDIWSVGCIFAEMITGKPLFPGDS------EIDQLFKIFQILGTPTEESWPGVTKLP-DYKP--TFPK---FPPK--- 242 (282)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHHHhCCCcHHHHHhhcccc-cccc--cccc---cCcc---
Confidence 99999999999999999999997655 455566666666665554443322211 0000 0000 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.... .+ ...+..+.++|++||..||++||++++++.||||
T Consensus 243 -~~~~--~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 243 -DLEK--VL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred -chHH--hc-ccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0000 01 1236678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=286.40 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=202.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.+++|.+.... .....+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~ 66 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC--------------NSPYIVGFYG 66 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC--------------CCCchhhhhe
Confidence 36888999999999999999999999999999887542 2335567889899888 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .....++++|++ +++|.+++.... ..+++..+..++.|++.|+++||+ . |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~-- 138 (265)
T cd06605 67 AFY----NNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRG-- 138 (265)
T ss_pred eee----cCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCC--
Confidence 887 567899999999 478888776543 458899999999999999999999 7 999999999999998765
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+..++
T Consensus 139 -----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 177 (265)
T cd06605 139 -----------------------------------------QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYS 177 (265)
T ss_pred -----------------------------------------CEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCC
Confidence 4999999988655322 1225678899999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|..||....... ......+.......+.
T Consensus 178 ~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~------------------------------- 222 (265)
T cd06605 178 VKSDIWSLGLSLIELATGRFPYPPENDPP----DGIFELLQYIVNEPPP------------------------------- 222 (265)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCcccccc----ccHHHHHHHHhcCCCC-------------------------------
Confidence 99999999999999999999997543210 0111111111111000
Q ss_pred HHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 343 QVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 343 ~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+.. .+..+.++|.+||..||.+|||+.+++.||||+.
T Consensus 223 -------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 223 -------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred -------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 01112 5667889999999999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=287.85 Aligned_cols=251 Identities=23% Similarity=0.355 Sum_probs=196.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
++|++.++||+|+||.||+|.+..+++.||+|.++.... ....+.+|+.+++.+ .|+|++++++.
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~ii~~~~~ 74 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC--------------KHSNIVAYFGS 74 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC--------------CCCCeeeEEEE
Confidence 478999999999999999999999999999999875432 234567889999988 89999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++|||+ +++|.+++... ..+++.++..++.|++.|+.|||+. |++|+||||+||+++.++
T Consensus 75 ~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~---- 143 (267)
T cd06645 75 YL----RRDKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNG---- 143 (267)
T ss_pred EE----eCCEEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC----
Confidence 86 567899999999 67888777554 3589999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh---cC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI---GA 259 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~---~~ 259 (393)
.++|+|||++...... .....++..|+|||++. ..
T Consensus 144 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 184 (267)
T cd06645 144 ---------------------------------------HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKG 184 (267)
T ss_pred ---------------------------------------CEEECcceeeeEccCcccccccccCcccccChhhhccccCC
Confidence 4999999998655322 23346889999999985 34
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+|||||++|+|++|..||...... ..+..... ....+...
T Consensus 185 ~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~------~~~~~~~~-~~~~~~~~-------------------------- 231 (267)
T cd06645 185 GYNQLCDIWAVGITAIELAELQPPMFDLHPM------RALFLMTK-SNFQPPKL-------------------------- 231 (267)
T ss_pred CCCchhhhHHHHHHHHHHhcCCCCcccccch------hhHHhhhc-cCCCCCcc--------------------------
Confidence 5788999999999999999999998644311 11110000 00000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
. .....+..+.++|++||..||++|||++++++|||
T Consensus 232 ------~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 232 ------K----DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ------c----ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0 00123456789999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=282.20 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=202.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL--------------NHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC--------------CCCChHHHH
Confidence 4899999999999999999999999999999887432 2345678899999988 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+...++|+||+ +++|.+.+... ..+++..+..++.|++.||.|||++ +++|+||+|+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~-- 137 (258)
T cd05578 67 YSFQ----DEENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQG-- 137 (258)
T ss_pred Hhhc----CCCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCC--
Confidence 8887 677899999999 77888777654 3588999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+...... .....++..|+|||.+.+..+
T Consensus 138 -----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 176 (258)
T cd05578 138 -----------------------------------------HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGY 176 (258)
T ss_pred -----------------------------------------CEEEeecccccccCCCccccccCCChhhcCHHHHcccCC
Confidence 4899999988765432 234457888999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+.. ..+.+......
T Consensus 177 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~------------------------------------ 216 (258)
T cd05578 177 SVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQET------------------------------------ 216 (258)
T ss_pred CCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhcc------------------------------------
Confidence 99999999999999999999999755421 11111111110
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH--HHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA--ADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~--~ell~hp~~ 386 (393)
....++...+..+.++|.+||..||.+||++ +|+++||||
T Consensus 217 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 -----ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred -----ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0011223345788899999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=280.41 Aligned_cols=250 Identities=24% Similarity=0.417 Sum_probs=201.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|+||.||+|....++..+|+|.+.... ...+.+.+|+.+++.+ .|+|++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~--------------~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM--------------KHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC--------------CCCChhhhhh
Confidence 5899999999999999999999999999999886432 2345677899999998 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++++||+ +++|.+.+.......+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~-- 139 (257)
T cd08225 67 SFQ----ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGM-- 139 (257)
T ss_pred eec----cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCC--
Confidence 876 667899999999 77888888765544578999999999999999999998 9999999999999976642
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||.+....... ....+++.|+|||.+.+..+
T Consensus 140 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~ 179 (257)
T cd08225 140 ----------------------------------------VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPY 179 (257)
T ss_pred ----------------------------------------eEEecccccchhccCCcccccccCCCccccCHHHHcCCCC
Confidence 47999999887654322 22357889999999988889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||++++++++|..||...+. ......+ ..+..+
T Consensus 180 ~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~--~~~~~~------------------------------- 220 (257)
T cd08225 180 NNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKI--CQGYFA------------------------------- 220 (257)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHH--hcccCC-------------------------------
Confidence 9999999999999999999999964331 1111110 001000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
......+..+.++|.+||..+|++|||+.+++.||||
T Consensus 221 --------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 221 --------PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred --------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 0112345678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=285.85 Aligned_cols=248 Identities=25% Similarity=0.353 Sum_probs=196.2
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|++++++.+.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~~--- 63 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV--------------SSRFIVSLAYAFE--- 63 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC--------------CCCCEeeeeeEEe---
Confidence 689999999999999999999999886432 2234456789999988 7899999988886
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+.......+++..+..++.|++.||.+||+. |++|+||+|+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~--------- 132 (277)
T cd05577 64 -TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHG--------- 132 (277)
T ss_pred -cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCC---------
Confidence 567899999999 67888887665444689999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||.+..... ......++..|++||.+.+..++.++|+|
T Consensus 133 ----------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~ 178 (277)
T cd05577 133 ----------------------------------NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWF 178 (277)
T ss_pred ----------------------------------CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhH
Confidence 499999998865432 22234567889999999888889999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
|||+++|+|++|+.||....... ....+... .....
T Consensus 179 slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~-----------------------------------------~~~~~ 214 (277)
T cd05577 179 ALGCTLYEMIAGRSPFRQRKEKV---EKEELKRR-----------------------------------------TLEMA 214 (277)
T ss_pred HHHHHHHHHhhCCCCCCCCcccc---cHHHHHhc-----------------------------------------ccccc
Confidence 99999999999999997544211 01110000 00011
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
...+...+..+.++|++||..||.+|| ++.++++||||+..
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 215 VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 112334567888999999999999999 89999999999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=283.11 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=189.8
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||++.+..+++.+|+|.+...... .....+|..+++.+.. ..|++++.+.+.+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~-- 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-----------GDCPFIVCMTYAFH-- 67 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh-----------CCCCcEeEEEEEEe--
Confidence 489999999999999999999999988654221 1223344444444421 26888988888776
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~ 189 (393)
.++..++||||+ +++|...+... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 68 --~~~~~~lv~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~-------- 134 (279)
T cd05633 68 --TPDKLCFILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHG-------- 134 (279)
T ss_pred --cCCeEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCC--------
Confidence 566799999999 67887776554 3489999999999999999999998 999999999999997665
Q ss_pred hhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhc-CCCCchhhH
Q psy12288 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIG-AGYGPAADI 267 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~-~~~~~~~Di 267 (393)
.++|+|||++...... .....++..|+|||.+.+ ..++.++|+
T Consensus 135 -----------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 179 (279)
T cd05633 135 -----------------------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADW 179 (279)
T ss_pred -----------------------------------CEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhh
Confidence 4999999998755332 223468999999999874 457899999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||+||++|+|++|..||....... ...+..... ..
T Consensus 180 ~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~-----------------------------------------~~ 214 (279)
T cd05633 180 FSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTL-----------------------------------------TV 214 (279)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCcC----HHHHHHHhh-----------------------------------------cC
Confidence 999999999999999997543211 111111100 00
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
...++...+..+.++|.+||..||.+|| +++++++||||++.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 1112344567888999999999999999 69999999999985
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=280.34 Aligned_cols=247 Identities=18% Similarity=0.244 Sum_probs=197.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.++||+|++|.||+|....+++.||+|.+..+......+.+|+.+++.+ .|++++++++.+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 71 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------------KHPNLVQLLGVC 71 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC--------------CCCChhheEEEE
Confidence 469999999999999999999999999999999886554456788899999998 789999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. ....++++|||+ +++|.+.+.......++...+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 72 ~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~----- 141 (263)
T cd05052 72 T----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENH----- 141 (263)
T ss_pred c----CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCC-----
Confidence 6 556789999999 78888888665445588899999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++........ ...++..|+|||.+.+..++
T Consensus 142 --------------------------------------~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 183 (263)
T cd05052 142 --------------------------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 183 (263)
T ss_pred --------------------------------------cEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCC
Confidence 499999999876543211 12235679999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|||||||++|+|++ |..||.+... ......+.. +.
T Consensus 184 ~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~~~~~~~--~~--------------------------------- 222 (263)
T cd05052 184 IKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEK--GY--------------------------------- 222 (263)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHC--CC---------------------------------
Confidence 99999999999999998 9999965431 111111100 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.++++.
T Consensus 223 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 223 ------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 011223456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=287.05 Aligned_cols=254 Identities=19% Similarity=0.294 Sum_probs=189.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC----------------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCC
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ----------------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
.++|++.++||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------- 76 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL------- 76 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-------
Confidence 4689999999999999999997532 34479999887532 2234678899999998
Q ss_pred cccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-----------------CCCCCHHHHHHHHH
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----------------YKGIHIQNVRTIIK 150 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----------------~~~l~~~~~~~i~~ 150 (393)
.|+|++++++.+. .....++||||+ +++|.+++.... ...++...+..++.
T Consensus 77 -------~h~niv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 145 (304)
T cd05096 77 -------KDPNIIRLLGVCV----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVAL 145 (304)
T ss_pred -------CCCCeeEEEEEEe----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHH
Confidence 8899999999887 456789999999 778888775421 12356778899999
Q ss_pred HHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEee
Q psy12288 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230 (393)
Q Consensus 151 ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~d 230 (393)
|++.||+|||+. |++||||||+||+++.++ .++|+|
T Consensus 146 ~i~~al~~lH~~-~ivH~dlkp~Nill~~~~-------------------------------------------~~kl~D 181 (304)
T cd05096 146 QIASGMKYLSSL-NFVHRDLATRNCLVGENL-------------------------------------------TIKIAD 181 (304)
T ss_pred HHHHHHHHHHHC-CccccCcchhheEEcCCc-------------------------------------------cEEECC
Confidence 999999999998 999999999999998766 499999
Q ss_pred cCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHH
Q psy12288 231 LGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIV 303 (393)
Q Consensus 231 fg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~ 303 (393)
||++...... .....++..|+|||++.+..++.++||||||+++|+|++ +..||...+. ...+..+.
T Consensus 182 fG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~------~~~~~~~~ 255 (304)
T cd05096 182 FGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTD------EQVIENAG 255 (304)
T ss_pred CccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCH------HHHHHHHH
Confidence 9998754322 112334778999999998889999999999999999986 5677765431 11111111
Q ss_pred HHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 304 ELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....... .. .....+..++..+.++|.+||..||++|||+.++.+
T Consensus 256 ~~~~~~~--------~~--------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 256 EFFRDQG--------RQ--------------------------VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred HHhhhcc--------cc--------------------------ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 1100000 00 000012345568899999999999999999999954
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=284.14 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=202.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..|+..+.||.|+||.||.|.+..++..||+|.+.... .....+.+|+.+++.+ .|++++++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 69 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC--------------DSPYVTKYYG 69 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 36888999999999999999999999999999887432 2345677888888888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|.+.+... .++...+..++.|++.|+++||+. +++|+||+|+||+++.++
T Consensus 70 ~~~----~~~~~~lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~--- 138 (277)
T cd06640 70 SYL----KGTKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQG--- 138 (277)
T ss_pred EEE----ECCEEEEEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCC---
Confidence 887 567899999999 67888777543 478899999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....++..|+|||.+.+..+
T Consensus 139 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~ 178 (277)
T cd06640 139 ----------------------------------------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 178 (277)
T ss_pred ----------------------------------------CEEEcccccceeccCCccccccccCcccccCHhHhccCCC
Confidence 49999999986553321 22356788999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... ....+ . .+.
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~------~~~~~-~-~~~--------------------------------- 217 (277)
T cd06640 179 DSKADIWSLGITAIELAKGEPPNSDMHPMR------VLFLI-P-KNN--------------------------------- 217 (277)
T ss_pred ccHHHHHHHHHHHHHHHHCCCCCCCcChHh------Hhhhh-h-cCC---------------------------------
Confidence 999999999999999999999996543211 00000 0 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+....+..+.+++.+||..+|.+||++.+++.||||....
T Consensus 218 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 218 ------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred ------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 0012245667888999999999999999999999999998754
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=288.24 Aligned_cols=260 Identities=20% Similarity=0.315 Sum_probs=197.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|+..++||+|+||.||++.+..+++.||+|.+.... .....+.+|+.++..+. .|+|++++++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-------------~~~~iv~~~~ 70 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-------------DCPYIVKFYG 70 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-------------CCCCEeeeee
Confidence 35677789999999999999999999999999886432 22345677888888772 4899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHH---HhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLI---ARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~---~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+. .....+++||+++.++.++. .......+++..+..++.|++.||+|||+..+++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~- 145 (288)
T cd06616 71 ALF----REGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG- 145 (288)
T ss_pred EEe----cCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC-
Confidence 876 45668899999976655433 2222345899999999999999999999755999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~- 259 (393)
.++|+|||++...... .....++..|+|||.+.+.
T Consensus 146 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 183 (288)
T cd06616 146 ------------------------------------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 183 (288)
T ss_pred ------------------------------------------cEEEeecchhHHhccCCccccccCccCccCHHHhcccc
Confidence 4999999998754332 2334678899999999876
Q ss_pred --CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHh-CCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 260 --GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV-GPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 260 --~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.++.++|+||||+++|+|++|+.||.... .....+.... +..|. ..
T Consensus 184 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~-~~---------------------- 232 (288)
T cd06616 184 RDGYDVRSDVWSLGITLYEVATGKFPYPKWN--------SVFDQLTQVVKGDPPI-LS---------------------- 232 (288)
T ss_pred ccCCcchhhhhHHHHHHHHHHhCCCCchhcc--------hHHHHHhhhcCCCCCc-CC----------------------
Confidence 57899999999999999999999996432 1111111111 11111 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+...+..+.+||.+||..||++|||++++++||||+...
T Consensus 233 ------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 233 ------------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred ------------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 001123567889999999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=287.71 Aligned_cols=258 Identities=27% Similarity=0.455 Sum_probs=203.7
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+|+. .++|++.+.||+|+||.||++.+..++..|++|.+... ....+.+.+|+.+++.+ .|+|+
T Consensus 14 ~~~~-~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~hp~i 78 (293)
T cd06647 14 VGDP-KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN--------------KHPNI 78 (293)
T ss_pred ccCc-hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc--------------CCCCe
Confidence 3444 36999999999999999999999989999999987643 22345677888888888 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .....++|+||+ ++++.+.+... .++..++..++.|++.|+++||++ |++|+||+|+||+++.
T Consensus 79 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~ 150 (293)
T cd06647 79 VNYLDSYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGM 150 (293)
T ss_pred eehhheee----eCCcEEEEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcC
Confidence 99999887 456789999999 77888777543 378889999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .++|+|||++...... .....+++.|++||.+
T Consensus 151 ~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~ 187 (293)
T cd06647 151 DG-------------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187 (293)
T ss_pred CC-------------------------------------------CEEEccCcceecccccccccccccCChhhcCchhh
Confidence 65 4999999987654322 2234578889999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
....++.++|+||||+++|++++|+.||...+... .+..+.. +..|
T Consensus 188 ~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~------~~~~~~~--~~~~-------------------------- 233 (293)
T cd06647 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYLIAT--NGTP-------------------------- 233 (293)
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh------heeehhc--CCCC--------------------------
Confidence 88888999999999999999999999997544211 0000000 0000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+...+..+.++|++||..+|++||++.+++.||||+..+
T Consensus 234 -----------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 234 -----------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred -----------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 0001123456788999999999999999999999999999876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=279.45 Aligned_cols=246 Identities=23% Similarity=0.378 Sum_probs=197.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+|++.++||+|+||.||++.+..++..+|+|.+... ....+.+.+|+.+++.+ .|+|++++.+.
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 66 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM--------------KHPNIVAFKES 66 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC--------------CCCCcceEEEE
Confidence 589999999999999999999999999999988642 23346677888899888 78999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+..++++|||+ ++++.+.+.......++.+.+..++.|++.||.+||++ |++|+||||+||+++.++
T Consensus 67 ~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~---- 137 (255)
T cd08219 67 FE----ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNG---- 137 (255)
T ss_pred EE----ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCC----
Confidence 87 667899999999 77888887655445588999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++++|||.+...... .....+++.|+|||++.+..++
T Consensus 138 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 178 (255)
T cd08219 138 ---------------------------------------KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYN 178 (255)
T ss_pred ---------------------------------------cEEEcccCcceeecccccccccccCCccccCHHHHccCCcC
Confidence 4999999998755332 2234678899999999988899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|..||...+. ......+. .+..
T Consensus 179 ~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~~--~~~~--------------------------------- 217 (255)
T cd08219 179 NKSDIWSLGCILYELCTLKHPFQANSW------KNLILKVC--QGSY--------------------------------- 217 (255)
T ss_pred chhhhhhhchhheehhhccCCCCCCCH------HHHHHHHh--cCCC---------------------------------
Confidence 999999999999999999999965431 11111110 0100
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.+++.-
T Consensus 218 ------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 ------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00123345678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=283.59 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=201.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..|+...+||+|++|.||++.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~vv~~~~~ 84 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY--------------QHPNIVEMYSS 84 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc--------------CCCChheEEEE
Confidence 35666789999999999999999999999999876432 2234567899999988 78999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+.+.++++||+ +++|.+.+.. ..++.+.+..++.|++.||++||++ |++||||+|+||+++.++
T Consensus 85 ~~----~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~---- 152 (285)
T cd06648 85 YL----VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDG---- 152 (285)
T ss_pred EE----cCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCC----
Confidence 76 567799999999 7788877765 3488999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+..++
T Consensus 153 ---------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 193 (285)
T cd06648 153 ---------------------------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYG 193 (285)
T ss_pred ---------------------------------------cEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCC
Confidence 4999999987644322 2234578899999999888899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||+|+++|+|++|+.||...+. ......+.. ..+.
T Consensus 194 ~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~~~~---~~~~------------------------------- 233 (285)
T cd06648 194 TEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKRIRD---NLPP------------------------------- 233 (285)
T ss_pred CcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHh---cCCC-------------------------------
Confidence 999999999999999999999965331 111111111 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
........+..+.++|++||..+|.+|||+.++++||||++...
T Consensus 234 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 234 -----KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred -----CCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 00001224567899999999999999999999999999988764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=278.93 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=200.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|+||.||+|.+..++..||+|.+..+. ...+.+.+|+.+++.+ .|+|++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL--------------KHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc--------------CCCccceeee
Confidence 5899999999999999999999999999999886432 2234567789999998 7899999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhh-----hcCCeeeccCCCCceEE
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLH-----TQCRIIHTDIKPENILM 177 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH-----~~~~i~H~dlkp~NIl~ 177 (393)
.+.. ..+...+++|||+ +++|.+.+... ....+++..+..++.|++.||++|| +. +++|+||+|+||++
T Consensus 67 ~~~~--~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili 143 (265)
T cd08217 67 RIID--RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFL 143 (265)
T ss_pred eeec--CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEE
Confidence 7652 2456789999999 67888777543 2345889999999999999999999 87 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVE 254 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE 254 (393)
+.++ .++|+|||.+...... .....++..|+|||
T Consensus 144 ~~~~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE 180 (265)
T cd08217 144 DANN-------------------------------------------NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPE 180 (265)
T ss_pred ecCC-------------------------------------------CEEEecccccccccCCcccccccccCCCccChh
Confidence 8766 4999999998765432 22346789999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|..||.... .......+.. +..
T Consensus 181 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~------------------------- 227 (265)
T cd08217 181 QLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QLQLASKIKE--GKF------------------------- 227 (265)
T ss_pred hhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HHHHHHHHhc--CCC-------------------------
Confidence 9998888999999999999999999999996543 1111111100 000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..++...+..+.+++.+||..+|.+|||+.++++|||+
T Consensus 228 --------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 228 --------------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred --------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 01223455788899999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=280.83 Aligned_cols=245 Identities=20% Similarity=0.334 Sum_probs=194.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|++|.||+|... ++..||+|.+.......+.+.+|+.+++.+ .|+|++++.+.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 70 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTL--------------QHDKLVRLYAVV 70 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhC--------------CCCCeeeEEEEE
Confidence 58999999999999999999864 556799998876555567788999999998 789999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++||++ +++|.+++.......++...+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 71 ~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~----- 140 (261)
T cd05072 71 T----KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESL----- 140 (261)
T ss_pred c----CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCC-----
Confidence 6 566789999999 78998888765545688899999999999999999998 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++....... ....++..|+|||.+.+..++
T Consensus 141 --------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 182 (261)
T cd05072 141 --------------------------------------MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 182 (261)
T ss_pred --------------------------------------cEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCC
Confidence 48999999987654321 122346679999999888889
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||..... ......+.. ..+
T Consensus 183 ~~~Di~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~~~---~~~------------------------------- 222 (261)
T cd05072 183 IKSDVWSFGILLYEIVTYGKIPYPGMSN------SDVMSALQR---GYR------------------------------- 222 (261)
T ss_pred hhhhhhhhHHHHHHHHccCCCCCCCCCH------HHHHHHHHc---CCC-------------------------------
Confidence 99999999999999998 9999965431 111111110 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.....+..+.+++.+||..+|++||+++++++
T Consensus 223 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 223 -------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0011234567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=294.96 Aligned_cols=288 Identities=21% Similarity=0.248 Sum_probs=194.7
Q ss_pred EEeccc--CceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWG--HFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
..||.| +||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.+ .|+|++++++.|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF--------------RHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCcceEeeeEe
Confidence 456666 999999999999999999999874322 235567888888877 8999999999987
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.+...+++||++ ++++.+++.......+++..+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 70 ----~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~------ 138 (328)
T cd08226 70 ----TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDG------ 138 (328)
T ss_pred ----cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCC------
Confidence 567799999999 67888877665444588999999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhHHHh
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE~~~ 257 (393)
.++++||+.+...... .....++..|++||++.
T Consensus 139 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 181 (328)
T cd08226 139 -------------------------------------LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLR 181 (328)
T ss_pred -------------------------------------cEEEechHHHhhhhccCccccccccccccccCccCccChhhhc
Confidence 3888888754322110 01122456799999997
Q ss_pred cC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee---
Q psy12288 258 GA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR--- 332 (393)
Q Consensus 258 ~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 332 (393)
+. .++.++|+|||||++|+|++|+.||..... ...+..........|......................
T Consensus 182 ~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (328)
T cd08226 182 QDLYGYNVKSDIYSVGITACELATGRVPFQDMLR------TQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIG 255 (328)
T ss_pred CCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcCh------HHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccc
Confidence 64 478999999999999999999999975431 1122222111111111000000000000000000000
Q ss_pred -ccCCCcchhHHHH--hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 333 -IDNLKPWGLYQVL--TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 333 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
......+. .... ......+..++..+.+||++||+.||++|||++|+++||||++..
T Consensus 256 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 256 ESVVAAGMT-QTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred cchhccccc-cccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00000000 0000 000112245678899999999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=281.59 Aligned_cols=252 Identities=25% Similarity=0.347 Sum_probs=195.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-----------chhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-----------ADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
+|.+.+.||+|++|.||+|.+..+++.+|+|.++..... .+.+.+|+.+++.+ .|
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h 67 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL--------------DH 67 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc--------------CC
Confidence 689999999999999999999989999999987532111 13466788888888 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++++++++.+. .....++||||+ +++|.+.+... ..++...+..++.|++.||.+||++ +++|+||+|+||+
T Consensus 68 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil 140 (272)
T cd06629 68 LNIVQYLGFET----TEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLL 140 (272)
T ss_pred CCcceEEEEec----cCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEE
Confidence 99999988776 566789999999 77888877664 4588999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~ 251 (393)
++.++ .++++|||++...... .....++..|+
T Consensus 141 ~~~~~-------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~ 177 (272)
T cd06629 141 VDADG-------------------------------------------ICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177 (272)
T ss_pred EcCCC-------------------------------------------eEEEeeccccccccccccccccccccCCcccc
Confidence 98665 4999999988754321 12235688999
Q ss_pred hhHHHhcCC--CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 252 SVEVLIGAG--YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 252 aPE~~~~~~--~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|||.+.... ++.++|+||||+++|++++|..||..... . .......... .....
T Consensus 178 ~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~---~~~~~~~~~~---------~~~~~------ 233 (272)
T cd06629 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA------I---AAMFKLGNKR---------SAPPI------ 233 (272)
T ss_pred CHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch------H---HHHHHhhccc---------cCCcC------
Confidence 999988754 78999999999999999999999953321 1 1111110000 00000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
........+..+.++|.+||..||.+|||++++++||||
T Consensus 234 ------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 234 ------------------PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ------------------CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 000112346788899999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=287.20 Aligned_cols=252 Identities=24% Similarity=0.405 Sum_probs=198.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.|+....||+|+||.||+|.+..+++.||+|.+... ....+.+.+|+.+++.+ .|+|++++++.+
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~hp~i~~~~~~~ 87 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY--------------QHQNVVEMYKSY 87 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC--------------CCCchhhhhhhe
Confidence 455667899999999999999999999999988643 22345677888888888 899999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++++||+ ++++...+.. ..+++..+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 88 ~----~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~----- 154 (297)
T cd06659 88 L----VGEELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDG----- 154 (297)
T ss_pred e----eCCeEEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCC-----
Confidence 7 567799999999 5677665543 3488999999999999999999998 999999999999998776
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||++.+..++.
T Consensus 155 --------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 196 (297)
T cd06659 155 --------------------------------------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGT 196 (297)
T ss_pred --------------------------------------cEEEeechhHhhcccccccccceecCccccCHHHHccCCCCc
Confidence 4999999988654322 22346789999999999888999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+|||||++|+|++|+.||.... ....+..+ .+..+..
T Consensus 197 ~~Dv~slG~il~el~~g~~p~~~~~------~~~~~~~~---~~~~~~~------------------------------- 236 (297)
T cd06659 197 EVDIWSLGIMVIEMVDGEPPYFSDS------PVQAMKRL---RDSPPPK------------------------------- 236 (297)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH---hccCCCC-------------------------------
Confidence 9999999999999999999996433 11221111 1110000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.......+..+.++|++||..+|.+||+++++++||||.+..
T Consensus 237 -----~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~ 278 (297)
T cd06659 237 -----LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTG 278 (297)
T ss_pred -----ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence 000122345678999999999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=293.55 Aligned_cols=289 Identities=30% Similarity=0.486 Sum_probs=215.0
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+.++|++.+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.+. .|+|+
T Consensus 3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~ni 69 (337)
T cd07852 3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-------------DHPNI 69 (337)
T ss_pred chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc-------------CCCCc
Confidence 34667999999999999999999999989999999987532 222345667899888883 68899
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.+.. .++...++|||+++++|...+... .+++..+..++.|++.||++||+. |++|+||+|+||+++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~ 143 (337)
T cd07852 70 VKLLNVIKA--ENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSD 143 (337)
T ss_pred cceeeeecc--CCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCC
Confidence 999987752 234568999999988988887654 478888899999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------CCCCCCCCCCch
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--------FADEIQTRQYRS 252 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--------~~~~~~t~~y~a 252 (393)
+ .++|+|||.+...... .....++..|+|
T Consensus 144 ~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~a 180 (337)
T cd07852 144 C-------------------------------------------RVKLADFGLARSLSELEENPENPVLTDYVATRWYRA 180 (337)
T ss_pred C-------------------------------------------cEEEeeccchhccccccccccCcchhcccccccccC
Confidence 6 4999999988754321 123457889999
Q ss_pred hHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 253 VEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 253 PE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
||.+.+. .++.++|+||||+++|+|++|+.||.+.. .......+....+..+...+......... ....
T Consensus 181 PE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 250 (337)
T cd07852 181 PEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS------TLNQLEKIIEVIGPPSAEDIESIKSPFAA----TMLD 250 (337)
T ss_pred ceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHHHhhhHH----Hhhh
Confidence 9988654 47889999999999999999999997654 44556666666666555443322110000 0000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
......... . .......+..+.++|.+||..||.+|||+.++++||||+++..
T Consensus 251 ~~~~~~~~~----~---~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 251 SLPSRPRKP----L---DELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred hcccccccc----h---hhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 000000000 0 0011225678899999999999999999999999999988754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=281.20 Aligned_cols=245 Identities=15% Similarity=0.214 Sum_probs=189.0
Q ss_pred CeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+|++.+.||+|+||.||+|.+. ..+..||+|.++.... ....+.+|+..++.+ .|+|+++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~ 70 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF--------------DHSNIVR 70 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC--------------CCCCcCe
Confidence 57999999999999999999765 3456899999875432 224567788888887 7999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+.+.++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~ 144 (266)
T cd05064 71 LEGVIT----RGNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDL 144 (266)
T ss_pred EEEEEe----cCCCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCC
Confidence 998876 567799999999 556666665432 4588999999999999999999998 999999999999997765
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
.++++|||.+...... .....++..|+|||.+.
T Consensus 145 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 181 (266)
T cd05064 145 -------------------------------------------VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQ 181 (266)
T ss_pred -------------------------------------------cEEECCCcccccccccchhcccCCCCceeecCHHHHh
Confidence 4899999976543221 11223457899999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+..++.++|||||||++|++++ |..||...+. .+.+..+.. +.
T Consensus 182 ~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~------~~~~~~~~~--~~---------------------------- 225 (266)
T cd05064 182 YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG------QDVIKAVED--GF---------------------------- 225 (266)
T ss_pred hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHHC--CC----------------------------
Confidence 9889999999999999999775 9999975441 111111111 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+++.+||..+|.+||+++++++
T Consensus 226 -----------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 226 -----------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 00112345567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG4236|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=295.35 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=213.2
Q ss_pred CeEEEE--EEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVI--RKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.-|++. ++||+|.||.||-|.++.+|+.||||++.+. ......+++|+.+|+.+ .||.|+.
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l--------------~HPGiV~ 627 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL--------------HHPGIVN 627 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc--------------CCCCeeE
Confidence 346654 5899999999999999999999999988642 23346789999999999 8899999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+...|+ ....+++|||-+.|+.++.+.....+.+++.....++.||+.||.|||.+ +|+|+||||+|||+.....
T Consensus 628 le~M~E----T~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~ 702 (888)
T KOG4236|consen 628 LECMFE----TPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASP 702 (888)
T ss_pred EEEeec----CCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCC
Confidence 888887 66779999999999999999888888899999999999999999999998 9999999999999975542
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~ 260 (393)
-..+||||||+|+.++.. ....+||+.|.|||++...+
T Consensus 703 ----------------------------------------FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkG 742 (888)
T KOG4236|consen 703 ----------------------------------------FPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKG 742 (888)
T ss_pred ----------------------------------------CCceeeccccceeecchhhhhhhhcCCccccCHHHHhhcc
Confidence 125999999999988754 44568999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|.++.|+||+|||+|.-++|..||..... -.++++... -+=...+
T Consensus 743 yNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----IndQIQNAa----------------------------FMyPp~P-- 787 (888)
T KOG4236|consen 743 YNRSLDMWSVGVIIYVSLSGTFPFNEDED-----INDQIQNAA----------------------------FMYPPNP-- 787 (888)
T ss_pred ccccccceeeeEEEEEEecccccCCCccc-----hhHHhhccc----------------------------cccCCCc--
Confidence 99999999999999999999999964321 111111100 0001111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+.+.+..++|||..+|+..=++|.+++..+.|||+.+
T Consensus 788 -----------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 788 -----------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred -----------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 2678889999999999999999999999999999976
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=285.27 Aligned_cols=260 Identities=24% Similarity=0.308 Sum_probs=201.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+|++++++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 70 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC--------------RSPYIVSFYG 70 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc--------------CCCCcceEee
Confidence 57999999999999999999999999999999876432 2345678899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++||||+ +++|...+... +.++...+..++.+++.||.|||+..+++|+||+|+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--- 141 (284)
T cd06620 71 AFL----NENNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--- 141 (284)
T ss_pred eEe----cCCEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC---
Confidence 987 557899999999 66777666553 34889999999999999999999744899999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||++.+..++.
T Consensus 142 ----------------------------------------~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 181 (284)
T cd06620 142 ----------------------------------------QIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTV 181 (284)
T ss_pred ----------------------------------------cEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCc
Confidence 4999999987654322 22346789999999998888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCC--cHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSR--DDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
++|+|||||++|++++|..||.......... ...............
T Consensus 182 ~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 229 (284)
T cd06620 182 KSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-------------------------------- 229 (284)
T ss_pred cchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--------------------------------
Confidence 9999999999999999999997654321100 000000000000000
Q ss_pred HHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...++ ...+..+.+|+.+||..||.+|||+.|+++||||..
T Consensus 230 ------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 230 ------PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred ------CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 00011 124567889999999999999999999999998854
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0586|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=295.15 Aligned_cols=251 Identities=26% Similarity=0.468 Sum_probs=216.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
..|.+.++||.|.|+.|.+|.+..++..||||++.++... .+.+.+|+.+|+.+ .||||++++
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l--------------~HPnIvkl~ 121 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL--------------NHPNIVKLF 121 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc--------------CCcceeeee
Confidence 4799999999999999999999999999999998765433 45678999999999 999999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+.. ....+++||||+ ++.+++++.+.. .+.+.+++.++.|+..|++|||++ +|||||||++|||++.+.+
T Consensus 122 ~v~~----t~~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mn- 193 (596)
T KOG0586|consen 122 SVIE----TEATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMN- 193 (596)
T ss_pred eeee----ecceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccc-
Confidence 9887 567799999999 999999998763 477799999999999999999999 9999999999999998874
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
+|++|||++..+. ......+|++.|.|||++.+..|
T Consensus 194 ------------------------------------------ikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y 231 (596)
T KOG0586|consen 194 ------------------------------------------IKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKY 231 (596)
T ss_pred ------------------------------------------eeeeccccceeecccccccccCCCCCccChHhhcCccc
Confidence 9999999987654 44567889999999999999887
Q ss_pred -CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 -GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 -~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.+|+||+|+++|.|++|..||.+.+.++...
T Consensus 232 ~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~---------------------------------------------- 265 (596)
T KOG0586|consen 232 DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP---------------------------------------------- 265 (596)
T ss_pred CCcceehhhhhhhheeeeecccccCCcccccccc----------------------------------------------
Confidence 889999999999999999999998776544311
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+..++..+-..+.+..++|+++|..+|.+|++.+++..|.|++...
T Consensus 266 --rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 266 --RVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred --hheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence 222333444455667778999999999999999999999999987643
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=277.29 Aligned_cols=250 Identities=27% Similarity=0.429 Sum_probs=198.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.++.... ....+.+|+.+++.+ .|++++++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL--------------KHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC--------------CCCChhheee
Confidence 68999999999999999999999999999999876543 346678899999998 7889999888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++|+||+ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~--- 136 (264)
T cd06626 67 VEV----HREKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNG--- 136 (264)
T ss_pred eEe----cCCEEEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC---
Confidence 765 567899999999 67888877654 3378889999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-------CCCCCCCCCchhHHHh
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-------ADEIQTRQYRSVEVLI 257 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~t~~y~aPE~~~ 257 (393)
.++|+|||++....... ....++..|++||++.
T Consensus 137 ----------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~ 176 (264)
T cd06626 137 ----------------------------------------VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVIT 176 (264)
T ss_pred ----------------------------------------CEEEcccccccccCCCCCcccccccCCcCCcCccChhhcc
Confidence 49999999887653221 1235678999999998
Q ss_pred cCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 258 GAG---YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 258 ~~~---~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.. .+.++|+||||+++|++++|..||..... .......... +..+.
T Consensus 177 ~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~------~~~~~~~~~~-~~~~~----------------------- 226 (264)
T cd06626 177 GGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN------EFQIMFHVGA-GHKPP----------------------- 226 (264)
T ss_pred CCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc------hHHHHHHHhc-CCCCC-----------------------
Confidence 766 78999999999999999999999965431 1111111000 11000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+.....+..+.++|.+||..||.+|||+.|++.|||+
T Consensus 227 --------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 227 --------------IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --------------CCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00011235677899999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=295.42 Aligned_cols=250 Identities=17% Similarity=0.260 Sum_probs=191.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.+..+ +..||+|.++... ...+.+.+|+.+++.+. .|+|
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-------------~h~n 103 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-------------QHKN 103 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-------------cCCc
Confidence 56899999999999999999986544 3579999987532 22345678999998883 6899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. .....++||||+ +++|.+++....
T Consensus 104 Iv~~~~~~~----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (374)
T cd05106 104 IVNLLGACT----HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSD 179 (374)
T ss_pred eeeEeeEec----CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccc
Confidence 999999886 566799999999 788888774321
Q ss_pred --------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 137 --------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 137 --------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
...++...+..++.|++.||+|||++ |++||||||+||+++.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~--------- 249 (374)
T cd05106 180 TYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGR--------- 249 (374)
T ss_pred cccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCC---------
Confidence 12367788999999999999999998 999999999999998665
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHHHhcCCCCchh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++........ ...++..|+|||++.+..++.++
T Consensus 250 ----------------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 295 (374)
T cd05106 250 ----------------------------------VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQS 295 (374)
T ss_pred ----------------------------------eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccc
Confidence 599999999875432211 12245679999999988899999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
|||||||++|+|++ |+.||...... ......... +.
T Consensus 296 DvwSlGvil~ellt~G~~Pf~~~~~~------~~~~~~~~~-~~------------------------------------ 332 (374)
T cd05106 296 DVWSYGILLWEIFSLGKSPYPGILVN------SKFYKMVKR-GY------------------------------------ 332 (374)
T ss_pred cHHHHHHHHHHHHhCCCCCCcccccc------HHHHHHHHc-cc------------------------------------
Confidence 99999999999997 99999754311 111111110 00
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.++++.
T Consensus 333 ---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 333 ---QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred ---CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000112235678899999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=289.06 Aligned_cols=252 Identities=26% Similarity=0.409 Sum_probs=200.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.|+..+.||+|+||.||+|.+..++..||+|.+.... ...+.+.+|+.+++.+ .|+|++++.+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 69 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC--------------DSPYITRYYG 69 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC--------------CCCccHhhhc
Confidence 35777888999999999999999999999999886432 2335678899999988 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ ++++.+.+.. ..+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++
T Consensus 70 ~~~----~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~--- 138 (277)
T cd06642 70 SYL----KGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQG--- 138 (277)
T ss_pred ccc----cCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCC---
Confidence 887 567799999999 6677776643 3488999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++++|||++....... ....++..|+|||.+.+..+
T Consensus 139 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 178 (277)
T cd06642 139 ----------------------------------------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 178 (277)
T ss_pred ----------------------------------------CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCC
Confidence 49999999987554321 22356888999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... .... .....
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~------~~~~---~~~~~-------------------------------- 217 (277)
T cd06642 179 DFKADIWSLGITAIELAKGEPPNSDLHPMR------VLFL---IPKNS-------------------------------- 217 (277)
T ss_pred chhhhHHHHHHHHHHHHhCCCCCcccchhh------HHhh---hhcCC--------------------------------
Confidence 999999999999999999999986433111 0000 00000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...+....+..+.+++.+||..+|.+||++.++++||||+....
T Consensus 218 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06642 218 ------PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTK 261 (277)
T ss_pred ------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhh
Confidence 00012334567889999999999999999999999999986544
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=280.39 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=191.5
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|.+..+++.||+|.+...... ......|..+++.+.. ..|++++++.+.+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~-- 67 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-----------GDCPFIVCMSYAFH-- 67 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh-----------CCCCcEeeeeeeee--
Confidence 489999999999999999999999988653211 1123444444444422 26889999888887
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~ 189 (393)
.....++||||+ +++|...+... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 68 --~~~~~~~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~-------- 134 (278)
T cd05606 68 --TPDKLSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHG-------- 134 (278)
T ss_pred --cCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCC--------
Confidence 567899999999 77777766543 3589999999999999999999998 999999999999998766
Q ss_pred hhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcC-CCCchhhH
Q psy12288 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA-GYGPAADI 267 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~-~~~~~~Di 267 (393)
.++|+|||++...... .....++..|+|||.+.+. .++.++|+
T Consensus 135 -----------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 179 (278)
T cd05606 135 -----------------------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 179 (278)
T ss_pred -----------------------------------CEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccch
Confidence 4999999998755322 2234689999999999754 57899999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||+|+++|+|++|+.||........ ....... ...
T Consensus 180 ~s~G~~l~~l~~g~~p~~~~~~~~~----~~~~~~~-----------------------------------------~~~ 214 (278)
T cd05606 180 FSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMT-----------------------------------------LTM 214 (278)
T ss_pred HhHHHHHHHHHhCCCCCCCCCccch----HHHHHHh-----------------------------------------hcc
Confidence 9999999999999999975432110 0000000 001
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
...++...+..+.+++.+||..||.+|| ++.++++||||+...
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 1123344567889999999999999999 999999999998763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=281.05 Aligned_cols=248 Identities=26% Similarity=0.419 Sum_probs=200.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|....+++.|++|++..+. .....+.+|..+++.+. .|+|++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-------------~~~~i~~~ 67 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-------------GHPGIIKL 67 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-------------cCCCchhH
Confidence 47999999999999999999999999999999987532 22345677888888871 38999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+...+++||++ +++|.+.+... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 68 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~- 139 (280)
T cd05581 68 YYTFQ----DEENLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDM- 139 (280)
T ss_pred HHHhc----CCceEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCC-
Confidence 99886 667899999999 88998888765 3589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---------------------
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--------------------- 241 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--------------------- 241 (393)
.++++|||++.......
T Consensus 140 ------------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (280)
T cd05581 140 ------------------------------------------HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177 (280)
T ss_pred ------------------------------------------CEEecCCccccccCCccccccCCCCCcccccccccccc
Confidence 49999999887553221
Q ss_pred --CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 242 --ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 242 --~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
....++..|++||......++.++|+||||++++++++|..||...+ ....+..+..
T Consensus 178 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~--------------- 236 (280)
T cd05581 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN------EYLTFQKILK--------------- 236 (280)
T ss_pred ccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHh---------------
Confidence 12346788999999988888999999999999999999999997544 1111111111
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWL 386 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~ 386 (393)
....++...+..+.++|.+||+.||.+||++ +++++||||
T Consensus 237 ---------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 237 ---------------------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred ---------------------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 1112233446778899999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=286.15 Aligned_cols=256 Identities=23% Similarity=0.316 Sum_probs=201.6
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
....+|++.++||+|+||.||+|.+..+++.||+|.+..... ..+.+.+|+.+++.+ .|+|+
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l--------------~h~ni 77 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL--------------RHPNT 77 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC--------------CCCCE
Confidence 344679999999999999999999999999999998864321 224567899999998 89999
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++.+.+. .+...++||||+.+++.+.+.... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.+
T Consensus 78 v~~~~~~~----~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~ 151 (307)
T cd06607 78 IEYKGCYL----REHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEP 151 (307)
T ss_pred EEEEEEEE----eCCeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCC
Confidence 99999887 566789999999888888775433 3589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh---
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI--- 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~--- 257 (393)
+ .++|+|||++..... .....++..|+|||++.
T Consensus 152 ~-------------------------------------------~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~ 187 (307)
T cd06607 152 G-------------------------------------------TVKLADFGSASLVSP-ANSFVGTPYWMAPEVILAMD 187 (307)
T ss_pred C-------------------------------------------CEEEeecCcceecCC-CCCccCCccccCceeeeccC
Confidence 6 499999998865432 23446788999999875
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
...++.++||||||+++|+|++|+.||...+. ......+.. +..|.
T Consensus 188 ~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~------~~~~~~~~~--~~~~~-------------------------- 233 (307)
T cd06607 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQ--NDSPT-------------------------- 233 (307)
T ss_pred CCCCCcccchHHHHHHHHHHHcCCCCCCCccH------HHHHHHHhc--CCCCC--------------------------
Confidence 34578899999999999999999999964431 111111100 00000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
......+..+.++|.+||..||.+||++.+++.||||....
T Consensus 234 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 234 ------------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred ------------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 00122456788999999999999999999999999998654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=278.34 Aligned_cols=248 Identities=27% Similarity=0.402 Sum_probs=192.1
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
....||+|+||.||+|.+..++..|++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~-- 75 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL--------------KHRNIVQYLGSDS-- 75 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc--------------CCCCeeeeeeeec--
Confidence 3468999999999999999999999999876442 2345678899999988 8899999998876
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGI--HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l--~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.+...++++|++ +++|.+.+.... ..+ +...+..++.|++.||+|||++ |++|+||||+||+++.+..
T Consensus 76 --~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~----- 146 (268)
T cd06624 76 --ENGFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSG----- 146 (268)
T ss_pred --cCCEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCC-----
Confidence 567899999999 678888776532 234 7788889999999999999998 9999999999999975432
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC--CC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG--YG 262 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~--~~ 262 (393)
.++|+|||.+...... .....++..|+|||.+.+.. ++
T Consensus 147 -------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 189 (268)
T cd06624 147 -------------------------------------VVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYG 189 (268)
T ss_pred -------------------------------------eEEEecchhheecccCCCccccCCCCccccChhhhccccccCC
Confidence 4999999988654321 22345788999999987653 78
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||+|+++|+|++|..||....... ...... .
T Consensus 190 ~~~Dv~slGvvl~~l~~g~~p~~~~~~~~-----~~~~~~-~-------------------------------------- 225 (268)
T cd06624 190 APADIWSLGCTIVEMATGKPPFIELGEPQ-----AAMFKV-G-------------------------------------- 225 (268)
T ss_pred chhhhHHHHHHHHHHHhCCCCCccccChh-----hhHhhh-h--------------------------------------
Confidence 89999999999999999999995432110 000000 0
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.......++...+..+.+++++||..+|.+|||+.|++.||||
T Consensus 226 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 226 -MFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -hhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0000111234456778899999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=284.18 Aligned_cols=276 Identities=20% Similarity=0.276 Sum_probs=193.9
Q ss_pred CceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeE
Q psy12288 40 HFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTH 116 (393)
Q Consensus 40 ~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 116 (393)
++|.||.+++..+++.||+|.+... ......+.+|+.+++.+ .|+|++++++.+. ....
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l--------------~h~~i~~~~~~~~----~~~~ 73 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL--------------QHPNILPYVTSFI----VDSE 73 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc--------------CCcchhhhhheee----cCCe
Confidence 4456677767779999999998753 23345778999999998 7899999999887 5677
Q ss_pred EEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhccc
Q psy12288 117 ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195 (393)
Q Consensus 117 ~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~ 195 (393)
.+++|||+ ++++.+++.......+++..+..++.|++.||+|||++ +++|+||||+||+++.++
T Consensus 74 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~-------------- 138 (314)
T cd08216 74 LYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDG-------------- 138 (314)
T ss_pred EEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCC--------------
Confidence 99999999 67787777665445588999999999999999999998 999999999999998766
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhHHHhcC--CCCc
Q psy12288 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVEVLIGA--GYGP 263 (393)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE~~~~~--~~~~ 263 (393)
.++++|||.+...... .....++..|+|||++... .++.
T Consensus 139 -----------------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 189 (314)
T cd08216 139 -----------------------------KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNE 189 (314)
T ss_pred -----------------------------ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCc
Confidence 4899999987644211 1223457789999999764 4789
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||+||++|+|++|+.||...... . .......+..+......... ...+........... ...
T Consensus 190 ~~Diws~G~il~el~~g~~pf~~~~~~------~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~ 255 (314)
T cd08216 190 KSDIYSVGITACELANGHVPFKDMPAT------Q--MLLEKVRGTVPCLLDKSTYP-----LYEDSMSQSRSSNEH-PNN 255 (314)
T ss_pred chhHHHHHHHHHHHHhCCCCCCCCCHH------H--HHHHHHhccCccccccCchh-----hhcCCcCcccccccc-cch
Confidence 999999999999999999999754321 1 11112222222111000000 000000000000000 000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
............+..+.+|+++||..||++|||++|+++||||+.+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~ 303 (314)
T cd08216 256 RDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR 303 (314)
T ss_pred hhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence 111111223456778999999999999999999999999999998864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-37 Score=277.59 Aligned_cols=246 Identities=20% Similarity=0.318 Sum_probs=195.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... +++.||+|.+.........+.+|+.+++.+ .|+|++++.+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 68 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQL--------------QHPRLVRLYA 68 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhc--------------CCcCeeeEEE
Confidence 4578999999999999999999754 567899999886665567788999999998 7889999887
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++||++ +++|.+.+.......++..++..++.|++.||++||+. |++|+||||+||+++.++
T Consensus 69 ~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~--- 139 (260)
T cd05067 69 VVT-----QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETL--- 139 (260)
T ss_pred EEc-----cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCC---
Confidence 653 34589999999 78898887665555688999999999999999999997 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++....... ....++..|+|||.+.+..
T Consensus 140 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~ 179 (260)
T cd05067 140 ----------------------------------------CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 179 (260)
T ss_pred ----------------------------------------CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCC
Confidence 49999999987554211 1223467899999999888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|++++ |+.||.+.+. ......+.. +.
T Consensus 180 ~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------- 220 (260)
T cd05067 180 FTIKSDVWSFGILLTEIVTYGRIPYPGMTN------PEVIQNLER--GY------------------------------- 220 (260)
T ss_pred cCcccchHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHHHc--CC-------------------------------
Confidence 8999999999999999998 9999975441 111111111 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+++.+||..+|++|||++++++
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 221 --------RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00112334567899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=275.68 Aligned_cols=248 Identities=29% Similarity=0.439 Sum_probs=197.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|+..+.||+|++|.||+|....++..|++|.+.... .....+.+|+.+++.+ .|+++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL--------------QHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc--------------CCCCchh
Confidence 5788899999999999999999899999999876432 1235577899999988 8899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+...++++||+ +++|.+++... ..++...+..++.|++.|+++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~ 139 (258)
T cd06632 67 YLGTER----EEDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNG 139 (258)
T ss_pred eeeeEe----cCCeEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC
Confidence 988776 567899999999 67888877654 3478899999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....++..|++||.+...
T Consensus 140 -------------------------------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~ 176 (258)
T cd06632 140 -------------------------------------------VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQ 176 (258)
T ss_pred -------------------------------------------CEEEccCccceeccccccccccCCCcceeCHHHhcCC
Confidence 4999999988754332 2344578899999999876
Q ss_pred C-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 G-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
. ++.++|+||||+++|+|++|..||..... ......+... +.
T Consensus 177 ~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~-~~------------------------------ 219 (258)
T cd06632 177 GGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRS-KE------------------------------ 219 (258)
T ss_pred CCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhc-cc------------------------------
Confidence 6 88999999999999999999999964331 1111111000 00
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...++...+..+.+++++||..+|.+||++.+++.|||+
T Consensus 220 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 220 ---------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ---------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 011223456778899999999999999999999999997
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG0596|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=289.69 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=195.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEe---cccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+..|+++++||+||.+.||++.....+- +|+|.+. .+......+.+|+.+|..+. +|..|+.+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~i-yalkkv~~~~~D~qtl~gy~nEI~lL~KLk-------------g~~~IIqL 425 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQI-YALKKVVLLEADNQTLDGYRNEIALLNKLK-------------GHDKIIQL 425 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcc-hhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-------------CCceEEEE
Confidence 6789999999999999999996654444 5555433 33445677899999999994 77888898
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++.=. .++++|||||+-..+|...+..... -.+.-.++.+..|++.|+.++|++ ||||.||||.|+|+-.
T Consensus 426 ~DYEv----~d~~lYmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlVk---- 495 (677)
T KOG0596|consen 426 YDYEV----TDGYLYMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLVK---- 495 (677)
T ss_pred eeeec----cCceEEEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEEe----
Confidence 88665 6889999999999999888866542 244348899999999999999998 9999999999999842
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~ 258 (393)
+++||+|||.|.-.... ....+||+.||+||.+..
T Consensus 496 ----------------------------------------G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~ 535 (677)
T KOG0596|consen 496 ----------------------------------------GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTD 535 (677)
T ss_pred ----------------------------------------eeEEeeeechhcccCccccceeeccccCcccccCHHHHhh
Confidence 26999999998766433 335689999999999964
Q ss_pred C-----------CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 259 A-----------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 259 ~-----------~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
. ..++++||||||||+|+|+-|+.||.. .....+.+..+..+--
T Consensus 536 ~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~--------~~n~~aKl~aI~~P~~----------------- 590 (677)
T KOG0596|consen 536 MSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ--------IINQIAKLHAITDPNH----------------- 590 (677)
T ss_pred ccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH--------HHHHHHHHHhhcCCCc-----------------
Confidence 3 257899999999999999999999952 2223333333322210
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.++|+.- ...+++++|+.||.+||.+||++.+||+|||+..
T Consensus 591 --------------------~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 591 --------------------EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred --------------------cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 0112211 1223889999999999999999999999999875
|
|
| >KOG0577|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=293.71 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=206.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|.-++.||.|+||.||-|++..+.+.||||.+..+... =+.+..|+.+|+.+ .|||.+.+-
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l--------------~HPntieYk 92 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL--------------RHPNTIEYK 92 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc--------------cCCCccccc
Confidence 577788999999999999999999999999998754322 24567799999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
++|- .....|+|||||-|+-.+.+.-.. .++.+.++..|+.+.+.||+|||+. +.+|||||..|||+++++
T Consensus 93 gCyL----re~TaWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g--- 163 (948)
T KOG0577|consen 93 GCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPG--- 163 (948)
T ss_pred ceee----ccchHHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCC---
Confidence 9987 566789999999777666665443 4588999999999999999999998 999999999999998887
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc---CCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG---AGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~ 261 (393)
.+||+|||.+... .+....+|||+|||||++.. +.|
T Consensus 164 ----------------------------------------~VKLaDFGSAsi~-~PAnsFvGTPywMAPEVILAMDEGqY 202 (948)
T KOG0577|consen 164 ----------------------------------------LVKLADFGSASIM-APANSFVGTPYWMAPEVILAMDEGQY 202 (948)
T ss_pred ----------------------------------------eeeeccccchhhc-CchhcccCCccccchhHheecccccc
Confidence 5999999987643 44567899999999999975 468
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+-++||||||++-.||...++|+...+ ...++..|.....+.-
T Consensus 203 dgkvDvWSLGITCIELAERkPPlFnMN------AMSALYHIAQNesPtL------------------------------- 245 (948)
T KOG0577|consen 203 DGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESPTL------------------------------- 245 (948)
T ss_pred CCccceeeccchhhhhhhcCCCccCch------HHHHHHHHHhcCCCCC-------------------------------
Confidence 999999999999999999999987555 3344444433322210
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
-+++-+..|..|+..||..-|.+|||.+++|.|+|+.-
T Consensus 246 ---------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 246 ---------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred ---------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 01345678999999999999999999999999999854
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=275.53 Aligned_cols=244 Identities=21% Similarity=0.319 Sum_probs=192.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||+|... .+..+|+|.+.........+.+|+.+++.+ .|+|++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 68 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKL--------------SHPKLVQLYGVC 68 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHC--------------CCCCceeEEEEE
Confidence 46899999999999999999775 455799998876555556788899999998 889999999887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++|||+ +++|.+.+.... ..++...+..++.|++.||+|||++ |++|+||+|+||+++.++
T Consensus 69 ~----~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~----- 137 (256)
T cd05114 69 T----QQKPLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTG----- 137 (256)
T ss_pred c----cCCCEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCC-----
Confidence 6 566799999999 788888776533 3478899999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++++|||.+...... .....++..|+|||.+.+..++
T Consensus 138 --------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (256)
T cd05114 138 --------------------------------------VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYS 179 (256)
T ss_pred --------------------------------------eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccc
Confidence 4999999988754321 1122345679999999888899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |+.||...+ ....+..+.. +..
T Consensus 180 ~~~Di~s~G~~l~el~~~g~~p~~~~~------~~~~~~~i~~--~~~-------------------------------- 219 (256)
T cd05114 180 SKSDVWSFGVLMWEVFTEGKMPFEKKS------NYEVVEMISR--GFR-------------------------------- 219 (256)
T ss_pred hhhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHC--CCC--------------------------------
Confidence 99999999999999999 899996544 1122222211 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++.+||..||.+||+++++++
T Consensus 220 -------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 -------LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0011223457889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=278.12 Aligned_cols=246 Identities=26% Similarity=0.350 Sum_probs=197.5
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||.|++|.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 63 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC--------------NHPFIVKLYRTFK--- 63 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC--------------CCCCEeeeeeeEE---
Confidence 699999999999999999999999987533 2335678899999988 8999999999876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+...++++||+ +++|.+.+... ..++...+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~--------- 130 (262)
T cd05572 64 -DKKYIYMLMEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNG--------- 130 (262)
T ss_pred -cCCccEEEEecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCC---------
Confidence 667799999998 78888888664 3388999999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++...... .....++..|++||.+.+..++.++|+|
T Consensus 131 ----------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~ 176 (262)
T cd05572 131 ----------------------------------YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW 176 (262)
T ss_pred ----------------------------------CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhh
Confidence 4999999998765432 2234678899999999888889999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
|+|+++|+|++|..||...... .......+.. +. ..
T Consensus 177 slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--~~--------------------------------------~~ 212 (262)
T cd05572 177 SLGILLYELLTGRPPFGEDDED----PMEIYNDILK--GN--------------------------------------GK 212 (262)
T ss_pred hhHHHHHHHHhCCCCcCCCCCC----HHHHHHHHhc--cC--------------------------------------CC
Confidence 9999999999999999754421 1111111110 00 11
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
..++...+..+.++|.+||..||.+||+ ++|+++||||++.
T Consensus 213 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 213 LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 1123334678899999999999999999 9999999999874
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=292.12 Aligned_cols=250 Identities=19% Similarity=0.275 Sum_probs=191.2
Q ss_pred CCeEEEEEEecccCceEEEEEEe-----CCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWD-----LQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.+ ..++..||+|+++... ...+.+.+|+.+++.++ .|+|
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-------------~Hpn 100 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-------------NHIN 100 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-------------CCcc
Confidence 35899999999999999999964 3456789999987432 22355778999999883 6899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. .+...++||||+ +|+|.+++....
T Consensus 101 Iv~l~~~~~----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (375)
T cd05104 101 IVNLLGACT----VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVS 176 (375)
T ss_pred eeeeeeeec----cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcc
Confidence 999999886 566789999999 888888875421
Q ss_pred -------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 137 -------------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 137 -------------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
...++.+.+..++.|++.||+|||++ |++||||||+||+++.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~---- 251 (375)
T cd05104 177 YVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGR---- 251 (375)
T ss_pred cccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCC----
Confidence 11367788899999999999999998 999999999999998665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHHHhcCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++....... ....++..|+|||++.+..
T Consensus 252 ---------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 292 (375)
T cd05104 252 ---------------------------------------ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCV 292 (375)
T ss_pred ---------------------------------------cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCC
Confidence 48999999987553221 1123456799999999988
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|||||||++|+|++ |..||...... ......... +.
T Consensus 293 ~~~~sDi~slG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~-~~------------------------------- 334 (375)
T cd05104 293 YTFESDVWSYGILLWEIFSLGSSPYPGMPVD------SKFYKMIKE-GY------------------------------- 334 (375)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCCch------HHHHHHHHh-Cc-------------------------------
Confidence 9999999999999999998 88999654311 111111100 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+||.+||..||++|||+.|+++.
T Consensus 335 --------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 335 --------RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred --------cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 000112234678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=276.19 Aligned_cols=250 Identities=24% Similarity=0.332 Sum_probs=195.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|++++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL--------------NHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC--------------CCcceeee
Confidence 47999999999999999999999999999999875321 2234567899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+. ..+..++++||+ +++|.+.+... ....+++..+..++.|++.||+|||++ +++|+||+|+||+++.+
T Consensus 68 ~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~ 142 (267)
T cd08228 68 LDSFI----EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITAT 142 (267)
T ss_pred eeeEE----ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCC
Confidence 99887 456789999999 56777766432 223478889999999999999999998 99999999999999776
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .++|+|||.+...... .....+++.|+|||.+.
T Consensus 143 ~-------------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 179 (267)
T cd08228 143 G-------------------------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179 (267)
T ss_pred C-------------------------------------------CEEECccccceeccchhHHHhcCCCCccccChhhhc
Confidence 6 4999999988765432 12345788999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|+||+|+++|+|++|..||...... ...+.......+..|.
T Consensus 180 ~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~-------------------------- 228 (267)
T cd08228 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LFSLCQKIEQCDYPPL-------------------------- 228 (267)
T ss_pred cCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-----HHHHHHHHhcCCCCCC--------------------------
Confidence 888899999999999999999999999643311 1111111111111100
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+..+.++|.+||..+|.+||++.++++.
T Consensus 229 -------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 229 -------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred -------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 012345678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=273.84 Aligned_cols=249 Identities=25% Similarity=0.429 Sum_probs=200.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||.|++|.||++.+..++..|++|.+.... .....+.+|+++++.+ .|+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL--------------NHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc--------------CCCChhheEE
Confidence 5899999999999999999999999999999987542 2345678899999998 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+. .+...++++|++ +++|.+.+.... ...++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~- 140 (258)
T cd08215 67 SFE----EKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNG- 140 (258)
T ss_pred EEe----cCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCC-
Confidence 876 557899999999 568888776542 35589999999999999999999998 999999999999998665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....+++.|+|||.+.+.
T Consensus 141 ------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~ 178 (258)
T cd08215 141 ------------------------------------------LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK 178 (258)
T ss_pred ------------------------------------------cEEECCccceeecccCcceecceeeeecccChhHhccC
Confidence 4999999988765432 1234578889999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+||+|+++++|++|+.||...+. ......... +.
T Consensus 179 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------- 219 (258)
T cd08215 179 PYNYKSDIWSLGCVLYELCTLKHPFEGENL------LELALKILK--GQ------------------------------- 219 (258)
T ss_pred CCCccccHHHHHHHHHHHHcCCCCCCCCcH------HHHHHHHhc--CC-------------------------------
Confidence 889999999999999999999999964331 111111100 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....+...+..+.+++++||..+|.+|||+.++++||||
T Consensus 220 --------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 220 --------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 001123455678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=276.35 Aligned_cols=255 Identities=30% Similarity=0.427 Sum_probs=205.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.|++|.+.... .....+.+|+..+..+ .|++++++.+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC--------------ESPYVVKCYG 66 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc--------------CCCCeeeEEE
Confidence 36899999999999999999999999999999887543 2356678899999988 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. .....+++|||+ +++|.+.+... ..++...+..++.|++.|+++||+ . +++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~-- 137 (264)
T cd06623 67 AFY----KEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKG-- 137 (264)
T ss_pred EEc----cCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCC--
Confidence 887 567899999999 58888887654 458999999999999999999999 8 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC---CCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---DEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+........ ...++..|+|||.+.+..
T Consensus 138 -----------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~ 176 (264)
T cd06623 138 -----------------------------------------EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGES 176 (264)
T ss_pred -----------------------------------------CEEEccCccceecccCCCcccceeecccccCHhhhCCCC
Confidence 499999998876543222 335688999999999888
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|+||||+++|+|++|..||....... .......+ .....
T Consensus 177 ~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~---~~~~~------------------------------ 220 (264)
T cd06623 177 YSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAI---CDGPP------------------------------ 220 (264)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHH---hcCCC------------------------------
Confidence 8999999999999999999999997654210 11111111 11000
Q ss_pred hHHHHhhhccCChh-hHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKA-EASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..++.. .+..+.++|.+||..+|.+||++.|+++||||+...
T Consensus 221 --------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 221 --------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred --------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 011122 567889999999999999999999999999997653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=275.67 Aligned_cols=245 Identities=20% Similarity=0.277 Sum_probs=191.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|++.++||+|+||.||+|.+..++ .||+|.+.........+.+|+.+++.+ .|++++++++.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l--------------~~~~i~~~~~~ 69 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL--------------RHEKLVQLYAV 69 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhC--------------CCCCcceEEEE
Confidence 357999999999999999999876554 599999886554456788999999998 78888888776
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ....+++|||+ ++++.+++.......++.+.+..++.|++.||++||+. +++|+||||+||+++.++
T Consensus 70 ~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~---- 139 (262)
T cd05071 70 VS-----EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENL---- 139 (262)
T ss_pred EC-----CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCC----
Confidence 53 34578999999 67888888764434578899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+........ ...++..|+|||...+..+
T Consensus 140 ---------------------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 180 (262)
T cd05071 140 ---------------------------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 180 (262)
T ss_pred ---------------------------------------cEEeccCCceeeccccccccccCCcccceecCHhHhccCCC
Confidence 489999999875543221 2234667999999988889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||..... ......+.. ..
T Consensus 181 ~~~~DvwslG~~l~ellt~g~~p~~~~~~------~~~~~~~~~---~~------------------------------- 220 (262)
T cd05071 181 TIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVER---GY------------------------------- 220 (262)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCCCCCCh------HHHHHHHhc---CC-------------------------------
Confidence 999999999999999999 8888865431 111111110 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..||++||++.++++
T Consensus 221 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 221 -------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 00112345567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=280.54 Aligned_cols=253 Identities=24% Similarity=0.409 Sum_probs=199.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.|++.++||+|+||.||+|.+..+++.||+|.+..+ ......+.+|+.+++.+.+ ..|++++++.+.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~-----------~~~~~vi~~~~~ 70 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ-----------SQPPNITKYYGS 70 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc-----------CCCCCeeeEeee
Confidence 588899999999999999999999999999988643 2234567889999999843 158999999988
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...+++|||+ +++|.+++... .+++..+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~---- 138 (277)
T cd06917 71 YL----KGPRLWIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTG---- 138 (277)
T ss_pred ee----eCCEEEEEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCC----
Confidence 76 567899999999 67887776543 488999999999999999999998 999999999999998765
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+. .+
T Consensus 139 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (277)
T cd06917 139 ---------------------------------------NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY 179 (277)
T ss_pred ---------------------------------------CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCcc
Confidence 4999999988765432 2334678899999998754 46
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||....... .+.......+.
T Consensus 180 ~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~---------~~~~~~~~~~~------------------------------ 220 (277)
T cd06917 180 DTKADIWSLGITIYEMATGNPPYSDVDAFR---------AMMLIPKSKPP------------------------------ 220 (277)
T ss_pred ccchhHHHHHHHHHHHHhCCCCCCCCChhh---------hhhccccCCCC------------------------------
Confidence 889999999999999999999996443111 00000000000
Q ss_pred HHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.++ ...+..+.+++.+||..||.+||++.+++.||||+...
T Consensus 221 --------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 221 --------RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred --------CCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 001 12456788999999999999999999999999998754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=279.43 Aligned_cols=255 Identities=20% Similarity=0.326 Sum_probs=195.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.... .+..||+|.+..... ....+.+|+.+++.+ .|++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~ 70 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF--------------TCHH 70 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC--------------CCCC
Confidence 4689999999999999999997553 245799998764332 223467788889888 7899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
++++++.+. .+...++||||+ +++|.+.+.... ...++...+..++.|++.||+|||++ +++||||
T Consensus 71 i~~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~di 145 (288)
T cd05061 71 VVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDL 145 (288)
T ss_pred eeeEEEEEc----CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCC
Confidence 999998876 556789999999 789988886432 12245667889999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEI 245 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~ 245 (393)
||+||+++.++ .++|+|||+++..... .....
T Consensus 146 kp~nili~~~~-------------------------------------------~~~L~Dfg~~~~~~~~~~~~~~~~~~ 182 (288)
T cd05061 146 AARNCMVAHDF-------------------------------------------TVKIGDFGMTRDIYETDYYRKGGKGL 182 (288)
T ss_pred ChheEEEcCCC-------------------------------------------cEEECcCCccccccccccccccCCCc
Confidence 99999998765 4999999988754321 11223
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+... .+....+. .+..
T Consensus 183 ~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~--~~~~--------------- 239 (288)
T cd05061 183 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN------EQVLKFVM--DGGY--------------- 239 (288)
T ss_pred ccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH--cCCC---------------
Confidence 4677999999998889999999999999999998 7889865431 11111110 0100
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc------CCCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR------HPWLNPRR 390 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~~~ 390 (393)
...+...+..+.+++.+||+.||.+|||+.++++ ||||+++.
T Consensus 240 ------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 240 ------------------------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred ------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 0112234567889999999999999999999987 99999864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=275.87 Aligned_cols=249 Identities=24% Similarity=0.374 Sum_probs=189.1
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccc----hhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.+..+++.||+|++....... .....|..++... ..|+|++++++.+.
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~-------------~~~~~i~~~~~~~~- 67 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQ-------------GESPYVAKLYYSFQ- 67 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhc-------------CCCCCeeeeeeeEE-
Confidence 57899999999999999999999999986532211 1223333333222 17899999999887
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
.+..+++|+||+ +++|..++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++
T Consensus 68 ---~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~------- 134 (260)
T cd05611 68 ---SKDYLYLVMEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTG------- 134 (260)
T ss_pred ---cCCeEEEEEeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCC-------
Confidence 667899999999 77888877654 3488999999999999999999998 999999999999997665
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++..... .....++..|++||.+.+..++.++|+|
T Consensus 135 ------------------------------------~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~ 177 (260)
T cd05611 135 ------------------------------------HLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWW 177 (260)
T ss_pred ------------------------------------cEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhH
Confidence 499999998765432 2334578899999999988889999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhh
Q psy12288 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEK 348 (393)
Q Consensus 269 SlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (393)
|||+++|+|++|..||...+. ......+.......+.
T Consensus 178 slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~------------------------------------- 214 (260)
T cd05611 178 SLGCVIFEFLFGYPPFHAETP------DAVFDNILSRRINWPE------------------------------------- 214 (260)
T ss_pred HHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcccCCCC-------------------------------------
Confidence 999999999999999965431 1111111100000000
Q ss_pred ccCChhhHHHHHHHHHhccccCCCCCcCH---HHHhcCCCCCCCC
Q psy12288 349 YHWSKAEASDFADFLLPMLHVNQKLRASA---ADCLRHPWLNPRR 390 (393)
Q Consensus 349 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~ell~hp~~~~~~ 390 (393)
......+..+.++|.+||..||.+||++ +|++.||||++.+
T Consensus 215 -~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 215 -EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred -cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 0112345778899999999999999954 7999999998764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=278.91 Aligned_cols=250 Identities=26% Similarity=0.398 Sum_probs=198.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
-|++.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++.
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~ 70 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC--------------DSPYVTKYYGS 70 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc--------------CCCCEeEEEEE
Confidence 4788999999999999999999899999999876432 2235677888888888 88999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .+...++||||+ ++++...+.. ..++...+..++.|++.|+.+||+. |++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~---- 138 (277)
T cd06641 71 YL----KDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHG---- 138 (277)
T ss_pred EE----eCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCC----
Confidence 87 567899999999 6677777654 2488999999999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++++|||++...... .....++..|+|||.+.+..++
T Consensus 139 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~ 179 (277)
T cd06641 139 ---------------------------------------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 179 (277)
T ss_pred ---------------------------------------CEEEeecccceecccchhhhccccCCccccChhhhccCCCC
Confidence 4999999988654332 1223578889999999888889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||+||++|+|++|..||..... ......+.. +..
T Consensus 180 ~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~--~~~--------------------------------- 218 (277)
T cd06641 180 SKADIWSLGITAIELAKGEPPHSELHP------MKVLFLIPK--NNP--------------------------------- 218 (277)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCccch------HHHHHHHhc--CCC---------------------------------
Confidence 999999999999999999999964331 111111000 000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+....+..+.+++.+||..+|.+||++.++++||||+...
T Consensus 219 ------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 219 ------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred ------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 001234456788999999999999999999999999998643
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=281.06 Aligned_cols=247 Identities=19% Similarity=0.283 Sum_probs=194.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC-----ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK-----TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.+|++.+.||+|+||.||+|.....+ ..|++|.+.... .....+.+|+.+++.+ .|+++
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i 70 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL--------------QHPNI 70 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc--------------CCccc
Confidence 36999999999999999999876655 679999886432 2235578899999988 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--------------KGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
+++++.+. .....+++|||+ +++|.+++..... ..++..++..++.|++.||+|||++ |+
T Consensus 71 ~~~~~~~~----~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i 145 (283)
T cd05048 71 VCLLGVCT----KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HF 145 (283)
T ss_pred ceEEEEEc----CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-Ce
Confidence 99988876 556789999999 7888888865321 3477888999999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+|+||||+||+++.++ .++|+|||++......
T Consensus 146 ~H~dlkp~Nil~~~~~-------------------------------------------~~~L~dfg~~~~~~~~~~~~~ 182 (283)
T cd05048 146 VHRDLAARNCLVGEGL-------------------------------------------TVKISDFGLSRDIYSADYYRV 182 (283)
T ss_pred eccccccceEEEcCCC-------------------------------------------cEEECCCcceeeccccccccc
Confidence 9999999999998766 4999999998754321
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+. .+....+.. +..
T Consensus 183 ~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~------~~~~~~i~~--~~~---------- 244 (283)
T cd05048 183 QSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN------QEVIEMIRS--RQL---------- 244 (283)
T ss_pred cCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc--CCc----------
Confidence 123345788999999998889999999999999999998 9999975442 111111110 100
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+|+.+||+.||.+||++.|++++
T Consensus 245 -----------------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 245 -----------------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred -----------------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 01224566789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=278.65 Aligned_cols=250 Identities=18% Similarity=0.256 Sum_probs=193.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.+.||+|++|.||+|.+.. ++..|++|.+..... ....+.+|+.+++.+ .|+|+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i 71 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF--------------NHQNI 71 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC--------------CCCCE
Confidence 579999999999999999999987 677899998764321 234577889999988 88999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-----KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
+++++.+. .....+++|||+ +++|.+++..... ..+++..+..++.|++.||+|||++ +++|+||||+|
T Consensus 72 ~~~~~~~~----~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~n 146 (277)
T cd05036 72 VRLIGVSF----ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARN 146 (277)
T ss_pred eeEEEEEc----cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhe
Confidence 99998776 455678999999 7888888765431 2478899999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQ 249 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~ 249 (393)
|+++.++. ...++|+|||+++...... .....+..
T Consensus 147 il~~~~~~----------------------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 186 (277)
T cd05036 147 CLLTCKGP----------------------------------------GRVAKIADFGMARDIYRASYYRKGGRAMLPIK 186 (277)
T ss_pred EEEeccCC----------------------------------------CcceEeccCccccccCCccceecCCCCCccHh
Confidence 99976542 1148999999987653211 12233567
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|+|||++.+..++.++|||||||++|+|++ |..||...+.. .....+ . +.
T Consensus 187 y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~------~~~~~~-~--~~-------------------- 237 (277)
T cd05036 187 WMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ------EVMEFV-T--GG-------------------- 237 (277)
T ss_pred hCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHH-H--cC--------------------
Confidence 999999998889999999999999999997 99999754421 111111 0 00
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.+++.+||..+|.+||++.++++|
T Consensus 238 ------------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 238 ------------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred ------------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0011223445678899999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0603|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=293.74 Aligned_cols=246 Identities=27% Similarity=0.414 Sum_probs=204.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.+.|.+...+|.|+|+.|-.+.+..+++..++|++... .....+|+.++.... .|+|++++.
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~-------------~h~niv~~~ 382 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVR-------------DHPNIVKSH 382 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhc-------------CCCcceeec
Confidence 3457899999999999999999999999999999998765 345567776666663 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe-echh
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC-VDYD 182 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~-~~~~ 182 (393)
+.+. .+.+.++|||.+ ++-+++.+..... +. .++..++++|+.|+.|||++ |++||||||+|||++ .++
T Consensus 383 ~v~~----~~~~~~~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g- 453 (612)
T KOG0603|consen 383 DVYE----DGKEIYLVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAG- 453 (612)
T ss_pred ceec----CCceeeeeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCC-
Confidence 9887 788999999999 6666666655432 33 77788999999999999998 999999999999995 444
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
+++|+|||.++.........+-|..|.|||++...+|+
T Consensus 454 ------------------------------------------~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt 491 (612)
T KOG0603|consen 454 ------------------------------------------HLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYT 491 (612)
T ss_pred ------------------------------------------cEEEEEechhhhCchhhcccchhhcccChhhhccCCCC
Confidence 59999999998777666666779999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+||||+++|+|++|+.||...... ..+...++.
T Consensus 492 ~acD~WSLGvlLy~ML~G~tp~~~~P~~---------~ei~~~i~~---------------------------------- 528 (612)
T KOG0603|consen 492 EACDWWSLGVLLYEMLTGRTLFAAHPAG---------IEIHTRIQM---------------------------------- 528 (612)
T ss_pred cchhhHHHHHHHHHHHhCCCccccCCch---------HHHHHhhcC----------------------------------
Confidence 9999999999999999999999765522 122222221
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..++..+|..+.+|+++||++||.+||++.+++.||||
T Consensus 529 ------~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 529 ------PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ------CccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 12335678899999999999999999999999999999
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-37 Score=280.49 Aligned_cols=246 Identities=22% Similarity=0.328 Sum_probs=193.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|.+.+.||+|+||.||+|.+.. ++..||+|.++..... .+.+.+|+.+++.+ .|+|+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i 70 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF--------------QHENI 70 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc--------------CCCCc
Confidence 468999999999999999998753 3578999998754322 46778999999998 78899
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
+++++.+. .+...+++|||+ +++|.+++.... ...+++..+..++.|++.|+++||++ |++|
T Consensus 71 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h 145 (280)
T cd05049 71 VKFYGVCT----EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVH 145 (280)
T ss_pred hheeeEEe----cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-Ceec
Confidence 99998887 557799999999 788888875432 23477888999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FA 242 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~ 242 (393)
+||||+||+++.++ .++|+|||++...... ..
T Consensus 146 ~dlkp~nili~~~~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~ 182 (280)
T cd05049 146 RDLATRNCLVGYDL-------------------------------------------VVKIGDFGMSRDVYTTDYYRVGG 182 (280)
T ss_pred cccccceEEEcCCC-------------------------------------------eEEECCcccceecccCcceecCC
Confidence 99999999998776 5999999998754221 12
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...+++.|+|||++.+..++.++||||||+++|+|++ |..||...+. ......+. .+..
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~------~~~~~~~~--~~~~------------ 242 (280)
T cd05049 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN------EEVIECIT--QGRL------------ 242 (280)
T ss_pred CCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHH--cCCc------------
Confidence 2344678999999999889999999999999999998 9999965442 11111111 0100
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++++||..||.+|||+.|+++
T Consensus 243 ---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 243 ---------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred ---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0012345577889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=274.74 Aligned_cols=246 Identities=21% Similarity=0.290 Sum_probs=195.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|++|.||+|.+. +++.||+|.++......+.+.+|+.+++.+ .|+|++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 69 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKL--------------RHPKLIQLYAV 69 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHC--------------CCCCccceeEE
Confidence 357999999999999999999865 456799999886555556788999999998 78999998887
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++||++ +++|.+.+.......++...+..++.|++.|+.+||+. |++|+||||+||+++.++
T Consensus 70 ~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~---- 140 (261)
T cd05068 70 CT----LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENN---- 140 (261)
T ss_pred Ee----cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCC----
Confidence 76 556789999999 88999888765444588999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-CC---CCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-DE---IQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-~~---~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++........ .. ..+..|+|||.+.+..+
T Consensus 141 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 181 (261)
T cd05068 141 ---------------------------------------ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRF 181 (261)
T ss_pred ---------------------------------------CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCC
Confidence 499999999876543211 11 22357999999988889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |+.||.+.. .......+... ..
T Consensus 182 ~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~-~~-------------------------------- 222 (261)
T cd05068 182 SIKSDVWSFGILLTEIVTYGRMPYPGMT------NAEVLQQVDQG-YR-------------------------------- 222 (261)
T ss_pred CchhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcC-CC--------------------------------
Confidence 999999999999999999 999997543 11111111110 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++.+||+.+|.+||+++++++
T Consensus 223 --------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 223 --------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred --------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 0112334567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=274.12 Aligned_cols=245 Identities=20% Similarity=0.308 Sum_probs=191.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.+.||+|+||.||.|.... +..+|+|.+.......+.+.+|+.+++.+ .|+|++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 68 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL--------------SHEKLVQLYGVC 68 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC--------------CCCCeeeEEEEE
Confidence 469999999999999999997654 44599998876554456788999999988 899999999887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++|||+ +++|.+.+.... ..+++..+..++.|++.||+|||+. |++|+||||+||+++.++
T Consensus 69 ~----~~~~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~----- 137 (256)
T cd05113 69 T----KQRPIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQG----- 137 (256)
T ss_pred c----cCCCcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCC-----
Confidence 6 455689999999 678888776533 3588999999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|++||.+.+..++
T Consensus 138 --------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~ 179 (256)
T cd05113 138 --------------------------------------CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFS 179 (256)
T ss_pred --------------------------------------CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCccc
Confidence 49999999876543221 112345679999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||...+. ......+.. +..
T Consensus 180 ~~~Di~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~--~~~-------------------------------- 219 (256)
T cd05113 180 SKSDVWAFGVLMWEVYSLGKMPYERFNN------SETVEKVSQ--GLR-------------------------------- 219 (256)
T ss_pred chhHHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHhc--CCC--------------------------------
Confidence 99999999999999998 9999964431 111111111 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||.+|||+.+++.+
T Consensus 220 -------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 220 -------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 00112345688899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=287.91 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=190.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.... +++.||+|++..... ..+.+.+|+.+++.+. .|+|
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-------------~h~n 72 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-------------HHLN 72 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-------------cCcc
Confidence 4589999999999999999997543 357899998874322 2245667888888873 5889
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
++++++.+.. .+..++++|||+ +++|.+.+....
T Consensus 73 iv~~~~~~~~---~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
T cd05054 73 VVNLLGACTK---PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIE 149 (337)
T ss_pred hhheeeeEec---CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccccccccc
Confidence 9999887752 345688999999 778877775421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCC
Q psy12288 137 -----------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199 (393)
Q Consensus 137 -----------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
...++.+.+..++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~------------------ 210 (337)
T cd05054 150 DKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENN------------------ 210 (337)
T ss_pred CcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCC------------------
Confidence 12478888999999999999999998 999999999999998766
Q ss_pred cCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHH
Q psy12288 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274 (393)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l 274 (393)
.++|+|||++...... .....++..|+|||++.+..++.++|||||||++
T Consensus 211 -------------------------~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l 265 (337)
T cd05054 211 -------------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLL 265 (337)
T ss_pred -------------------------cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHH
Confidence 4999999998765321 1123446789999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCCh
Q psy12288 275 FELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK 353 (393)
Q Consensus 275 ~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (393)
|+|++ |..||.+.... +.+...... +.. ...+.
T Consensus 266 ~el~t~g~~p~~~~~~~------~~~~~~~~~-~~~---------------------------------------~~~~~ 299 (337)
T cd05054 266 WEIFSLGASPYPGVQID------EEFCRRLKE-GTR---------------------------------------MRAPE 299 (337)
T ss_pred HHHHHcCCCCCCCCCcc------HHHHHHHhc-cCC---------------------------------------CCCCc
Confidence 99998 99999653311 111111110 000 00112
Q ss_pred hhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 354 AEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 354 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+..+.+++.+||+.+|++||++.|+++|
T Consensus 300 ~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 300 YATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 345678899999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=274.75 Aligned_cols=246 Identities=22% Similarity=0.334 Sum_probs=193.8
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... ++..+|+|.+.......+.+.+|+.+++.+ .|++++++++
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l--------------~~~~i~~~~~ 68 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKL--------------RHDKLVQLYA 68 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhc--------------CCCceEEEEe
Confidence 3568999999999999999999765 556799999886555567788999999999 7888988887
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....+++|||+ +++|.+.+.......+++..++.++.|++.||+|||++ +++|+||+|+||+++.++
T Consensus 69 ~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~--- 139 (260)
T cd05070 69 VVS-----EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGL--- 139 (260)
T ss_pred EEC-----CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCc---
Confidence 653 23478999999 67888888665445588999999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+....... ....++..|+|||.+.+..
T Consensus 140 ----------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 179 (260)
T cd05070 140 ----------------------------------------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 179 (260)
T ss_pred ----------------------------------------eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCC
Confidence 48999999987653321 1223456799999998888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|+|++ |..||.+.+ ..+....+.. +.
T Consensus 180 ~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~--~~------------------------------- 220 (260)
T cd05070 180 FTIKSDVWSFGILLTELVTKGRVPYPGMN------NREVLEQVER--GY------------------------------- 220 (260)
T ss_pred CcchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--CC-------------------------------
Confidence 9999999999999999999 899996543 1122221111 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+++.+||..||.+|||+.++++
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 221 --------RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred --------CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 00122345677899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=271.60 Aligned_cols=251 Identities=29% Similarity=0.435 Sum_probs=202.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|++.... ...+.+.+|+.+++.+ .|++++++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL--------------QHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc--------------CCCCEeeEEE
Confidence 4888999999999999999999999999999987554 2356778899999998 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+... .....++++|++ +++|.+.+.... .+++..+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 67 ~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~--- 138 (260)
T cd06606 67 SERDE--EKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDG--- 138 (260)
T ss_pred EEecC--CCCeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCC---
Confidence 88721 126799999999 788888876653 589999999999999999999998 999999999999998765
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||.+...... .....++..|++||.+.+.
T Consensus 139 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~ 178 (260)
T cd06606 139 ----------------------------------------VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGE 178 (260)
T ss_pred ----------------------------------------CEEEcccccEEecccccccccccCCCCCccccCHhhhcCC
Confidence 4999999988765443 2345678899999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
..+.++|+||||+++++|++|..||.... ............
T Consensus 179 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~------------------------------- 219 (260)
T cd06606 179 EYGRAADIWSLGCTVIEMATGKPPWSELG--------NPMAALYKIGSS------------------------------- 219 (260)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------chHHHHHhcccc-------------------------------
Confidence 88999999999999999999999996544 111111111000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
......+...+..+.++|.+||..||.+||++.|++.||||
T Consensus 220 ------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 220 ------GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred ------CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 00111233446788999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG1187|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=284.31 Aligned_cols=263 Identities=24% Similarity=0.312 Sum_probs=198.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
++|.-...||+|+||.||+|....+ ..||||.+...... ...+.+|+.++..+ .|+|+++++++
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l--------------~H~Nlv~LlGy 139 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRL--------------RHPNLVKLLGY 139 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcC--------------CCcCcccEEEE
Confidence 5788888999999999999966644 88999988765543 45699999999999 89999999999
Q ss_pred ceeecCCCe-EEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEeechh
Q psy12288 107 FKIYSRNGT-HICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMCVDYD 182 (393)
Q Consensus 107 ~~~~~~~~~-~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~~~~~ 182 (393)
+. +.. +.++|+||+ .|+|.+.+.......+++....+|+.+++.||+|||+.+. |+|||||++|||+|.+..
T Consensus 140 C~----e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 140 CL----EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred Ee----cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 98 445 699999999 7899888876543268999999999999999999999764 999999999999998884
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-CCC--CC-CCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFA--DE-IQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~~~--~~-~~t~~y~aPE~~~~ 258 (393)
+||+|||+++.... ... .. .||..|++||+...
T Consensus 216 -------------------------------------------aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~ 252 (361)
T KOG1187|consen 216 -------------------------------------------AKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST 252 (361)
T ss_pred -------------------------------------------EEccCccCcccCCccccceeeecCCCCccCChhhhcc
Confidence 99999999975543 222 22 78999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
+..+.++|||||||+++|+++|+.+........... ...-...... .. +...+.++. -
T Consensus 253 g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~---l~~w~~~~~~--------~~-~~~eiiD~~----------l 310 (361)
T KOG1187|consen 253 GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELS---LVEWAKPLLE--------EG-KLREIVDPR----------L 310 (361)
T ss_pred CCcCcccccccchHHHHHHHhCCcccCCCCCccccc---HHHHHHHHHH--------Cc-chhheeCCC----------c
Confidence 889999999999999999999998776433111111 1110001000 00 111111110 0
Q ss_pred chhHHHHhhhccCCh-hhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 339 WGLYQVLTEKYHWSK-AEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+ ...+. ..-..+..+..+|+..+|.+||++.|+++
T Consensus 311 -------~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 311 -------KE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred -------cC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 00 11222 34556889999999999999999999754
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=272.57 Aligned_cols=245 Identities=21% Similarity=0.299 Sum_probs=192.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|++|.||+|.+..++ .+|+|.+..+....+.+.+|+.+++.+ .|++++++++.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~~ 69 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKL--------------RHDKLVPLYAV 69 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhC--------------CCCCeeeEEEE
Confidence 357999999999999999999876554 589998876555556788899999998 78888888776
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ....+++|||+ +++|.+.+.......++...+..++.|++.||+|||+. |++|+||+|+||+++.++
T Consensus 70 ~~-----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~---- 139 (260)
T cd05069 70 VS-----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNL---- 139 (260)
T ss_pred Ec-----CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCC----
Confidence 53 34578999999 67898888765444578899999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++....... ....++..|+|||...+..+
T Consensus 140 ---------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~ 180 (260)
T cd05069 140 ---------------------------------------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 180 (260)
T ss_pred ---------------------------------------eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCc
Confidence 49999999987553221 12234667999999998889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||.+.. .......+.. +..
T Consensus 181 ~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~--~~~------------------------------- 221 (260)
T cd05069 181 TIKSDVWSFGILLTELVTKGRVPYPGMV------NREVLEQVER--GYR------------------------------- 221 (260)
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CCC-------------------------------
Confidence 999999999999999999 999997544 1111111111 000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++++||..||.+||+++++++
T Consensus 222 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 222 --------MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred --------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0112344567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=276.74 Aligned_cols=245 Identities=24% Similarity=0.363 Sum_probs=197.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+|++.++||.|+||.||+|.+.. +..+++|.+..... ....+.+|+.+++.+ .|++++++++.
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~ 70 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL--------------RHKHLISLFAV 70 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC--------------CCcchhheeee
Confidence 469999999999999999999887 88899999875543 456778899999988 78999999887
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....+++|||+ +++|.+++.......++...+..++.|++.||.|||++ |++|+||+|+||+++.++
T Consensus 71 ~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~---- 141 (261)
T cd05148 71 CS----VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDL---- 141 (261)
T ss_pred Ee----cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCc----
Confidence 76 566789999999 77999988765555688999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|++||.+....++
T Consensus 142 ---------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~ 182 (261)
T cd05148 142 ---------------------------------------VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFS 182 (261)
T ss_pred ---------------------------------------eEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCC
Confidence 49999999887553221 122346779999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |+.||...+ ....+..+.. +.
T Consensus 183 ~~~DiwslG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~--~~--------------------------------- 221 (261)
T cd05148 183 TKSDVWSFGILLYEMFTYGQVPYPGMN------NHEVYDQITA--GY--------------------------------- 221 (261)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHHh--CC---------------------------------
Confidence 99999999999999998 899996544 1112221111 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.++|.+||..||.+|||+.++++
T Consensus 222 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 222 ------RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 00122345678889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=275.49 Aligned_cols=242 Identities=24% Similarity=0.429 Sum_probs=194.4
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||.|+||.||+|.+..+++.+++|.+..... ....+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~~~~~~--- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA--------------QSPYVVKLYYSFQ--- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC--------------CCcchhHHHHhee---
Confidence 6899999999999999999999999875432 345677888889888 7899999988876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+...++++|++ +++|.+.+.+.. .+++..+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~--------- 130 (265)
T cd05579 64 -GKKNLYLVMEYLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNG--------- 130 (265)
T ss_pred -cCcEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCC---------
Confidence 677899999999 678888776643 589999999999999999999998 999999999999998776
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----------CCCCCCCCCCchhHHHhcC
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----------FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||++...... .....++..|++||.....
T Consensus 131 ----------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~ 176 (265)
T cd05579 131 ----------------------------------HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176 (265)
T ss_pred ----------------------------------CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCC
Confidence 4999999987654221 1233567889999999888
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
..+.++|+||||+++|++++|..||.... .......+.. +.
T Consensus 177 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~--~~------------------------------- 217 (265)
T cd05579 177 GHSKTVDWWSLGCILYEFLVGIPPFHGET------PEEIFQNILN--GK------------------------------- 217 (265)
T ss_pred CCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhc--CC-------------------------------
Confidence 88999999999999999999999996443 1111111111 00
Q ss_pred hhHHHHhhhccCChh--hHHHHHHHHHhccccCCCCCcCH---HHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKA--EASDFADFLLPMLHVNQKLRASA---ADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~---~ell~hp~~~~~ 389 (393)
..++.. .+..+.+++++||+.+|.+|||+ .++++||||+++
T Consensus 218 ---------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 218 ---------IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred ---------cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 011112 25678899999999999999999 999999999976
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=272.25 Aligned_cols=247 Identities=22% Similarity=0.305 Sum_probs=196.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... .+..+|+|.+..+......+.+|+.+++.+ .|++++++++
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~ 68 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKL--------------RHDKLVQLYA 68 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhC--------------CCCCEeeeee
Confidence 3468999999999999999999875 457799999887665667788999999998 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....+++||++ +++|.+.+.......++...+..++.|++.|+++||++ +++|+||+|+||+++.++
T Consensus 69 ~~~----~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~--- 140 (261)
T cd05034 69 VCS----EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENL--- 140 (261)
T ss_pred eee----cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCC---
Confidence 876 556789999999 67888888765445689999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+....... .....+..|+|||.+.+..
T Consensus 141 ----------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 180 (261)
T cd05034 141 ----------------------------------------VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGR 180 (261)
T ss_pred ----------------------------------------CEEECccccceeccchhhhhhhccCCCccccCHHHhccCC
Confidence 49999999987654211 1222356799999999888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|++++ |+.||.+.+ ....+..+.....
T Consensus 181 ~~~~~Di~slG~il~~l~t~g~~p~~~~~------~~~~~~~~~~~~~-------------------------------- 222 (261)
T cd05034 181 FTIKSDVWSFGILLTEIVTYGRVPYPGMT------NREVLEQVERGYR-------------------------------- 222 (261)
T ss_pred cCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC--------------------------------
Confidence 9999999999999999998 999996443 1222222111000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+++.+||..+|.+||+++++++
T Consensus 223 ---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 223 ---------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0111233567889999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=272.23 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=193.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||++... +..|++|.++... ..+.+.+|+.+++.+ .|++++++++.+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 68 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQL--------------RHSNLVQLLGVI 68 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhC--------------CCCCeeeEEEEE
Confidence 47999999999999999999654 7789999887543 345678999999998 788999988765
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
.. .+...+++|||+ +++|.+.+.......+++..+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 69 ~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~----- 139 (256)
T cd05082 69 VE---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDN----- 139 (256)
T ss_pred Ec---CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCC-----
Confidence 31 345689999999 67888888765544578899999999999999999998 999999999999998776
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||++...........++..|+|||++.+..++.++|
T Consensus 140 --------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 181 (256)
T cd05082 140 --------------------------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181 (256)
T ss_pred --------------------------------------cEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhh
Confidence 499999999876544433444567899999998888999999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
||||||++|+|++ |+.||...+. ......+.. +.
T Consensus 182 v~slG~i~~~l~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------------- 216 (256)
T cd05082 182 VWSFGILLWEIYSFGRVPYPRIPL------KDVVPRVEK--GY------------------------------------- 216 (256)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhc--CC-------------------------------------
Confidence 9999999999997 9999864331 111111100 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.++++.
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 217 --KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred --CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 001123456788899999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=272.16 Aligned_cols=250 Identities=27% Similarity=0.420 Sum_probs=197.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc------cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|++|.||+|.+..+++.||+|.+... ......+.+|+.+++.+ .|++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL--------------RHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc--------------CCCCcc
Confidence 3799999999999999999999999999999987532 11234677899999999 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+.. .....+++++|++ +++|.+.+... ..+++..+..++.|++.||.|||++ |++|+||+|+||+++.+
T Consensus 68 ~~~~~~~~--~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~ 142 (264)
T cd06653 68 QYYGCLRD--PEEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSA 142 (264)
T ss_pred eEEEEEEc--CCCCEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCC
Confidence 99887652 2345688999999 67888887654 3478899999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE 254 (393)
+ .++|+|||++...... .....++..|+|||
T Consensus 143 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (264)
T cd06653 143 G-------------------------------------------NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPE 179 (264)
T ss_pred C-------------------------------------------CEEECccccccccccccccCccccccCCcccccCHh
Confidence 5 4899999998754321 12235788999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+|||||++|+|++|+.||.... ....+.......
T Consensus 180 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~------------------------- 225 (264)
T cd06653 180 VISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE---------AMAAIFKIATQP------------------------- 225 (264)
T ss_pred hhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC---------HHHHHHHHHcCC-------------------------
Confidence 9998888999999999999999999999996432 111222221110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....++...+..+.++|++||. +|.+||++.++++|||.
T Consensus 226 ------------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 226 ------------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ------------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 0111345567788999999999 57999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=272.86 Aligned_cols=247 Identities=28% Similarity=0.450 Sum_probs=192.9
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+|.+.++||+|+||.||++.+..++..+++|+++... ........|+.+++.+ .|+|+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL--------------DHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC--------------CCCcHHH
Confidence 6899999999999999999998887777777765321 1223456788888887 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+. .....+++|||+ ++++.+.+.. .....+++..+..++.|++.||.+||+. |++|+||+|+||+++.
T Consensus 67 ~~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~ 141 (260)
T cd08222 67 FHASFL----ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN 141 (260)
T ss_pred HHHHHh----cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec
Confidence 999886 556789999999 6777776643 2234588999999999999999999998 9999999999999964
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
+ .++|+|||.+...... .....++..|+|||.+
T Consensus 142 ~--------------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~ 177 (260)
T cd08222 142 N--------------------------------------------LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEAL 177 (260)
T ss_pred C--------------------------------------------CEeecccCceeecCCCcccccCCCCCcCccCHHHH
Confidence 3 3899999987654221 2234568889999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHH-hCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL-VGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+..++.++|+||||+++|+|++|..||.... . ....... .+..|
T Consensus 178 ~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~---~~~~~~~~~~~~~------------------------- 223 (260)
T cd08222 178 KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------F---LSVVLRIVEGPTP------------------------- 223 (260)
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------H---HHHHHHHHcCCCC-------------------------
Confidence 88888899999999999999999999995432 1 1111111 11111
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.++...+..+.++|.+||..||++||++.|+++||||
T Consensus 224 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 --------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred --------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 1234556788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=268.44 Aligned_cols=249 Identities=28% Similarity=0.449 Sum_probs=200.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+|++.+.||+|++|.||++.+..+++.+++|.+..... ....+.+|+.+++.+ .|++++++.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 66 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC--------------KHPNIVKYYGSY 66 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC--------------CCCCEeEEEEEE
Confidence 48899999999999999999998999999999876543 456788899999998 788999998887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++++||+ +++|.+.+.... ..++...+..++.|++.|+++||.. |++|+||+|+||+++.++
T Consensus 67 ~----~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~----- 135 (253)
T cd05122 67 L----KKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDG----- 135 (253)
T ss_pred e----cCCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCC-----
Confidence 6 556789999999 578777776543 4589999999999999999999997 999999999999998765
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCCCCchhHHHhcCCCCch
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++|+|||.+....... ....++..|++||.+.+..++.+
T Consensus 136 --------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~ 177 (253)
T cd05122 136 --------------------------------------EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYK 177 (253)
T ss_pred --------------------------------------eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCcc
Confidence 49999999887665432 44567889999999998888999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|+||||+++|+|++|..||...+. ......... ...+.
T Consensus 178 ~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~--~~~~~--------------------------------- 216 (253)
T cd05122 178 ADIWSLGITAIELAEGKPPYSELPP------MKALFKIAT--NGPPG--------------------------------- 216 (253)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHHh--cCCCC---------------------------------
Confidence 9999999999999999999965431 111111110 00000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
.......+..+.++|.+||..||.+|||+.|+++|||
T Consensus 217 ----~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 ----LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ----cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0001112567889999999999999999999999999
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=271.84 Aligned_cols=245 Identities=18% Similarity=0.264 Sum_probs=196.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.+.||.|++|.||+|... ++.||+|.+.......+.+.+|+.+++.+ .|+|++++++.+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 69 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTL--------------RHPNLVQLLGVV 69 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhc--------------CCcceeeeEEEE
Confidence 57999999999999999999764 78899999886654456788899999998 789999999887
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....++|||++ +++|.+++.......+++..+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 70 ~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~----- 139 (256)
T cd05039 70 L----QGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDL----- 139 (256)
T ss_pred c----CCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCC-----
Confidence 6 466789999999 57988888765544689999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||.+............+..|+|||.+.+..++.++|
T Consensus 140 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~D 181 (256)
T cd05039 140 --------------------------------------VAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSD 181 (256)
T ss_pred --------------------------------------CEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHH
Confidence 489999999887644433444567799999998888899999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
+||||+++|++++ |..||...+. ......+.. +.
T Consensus 182 i~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------------- 216 (256)
T cd05039 182 VWSFGILLWEIYSFGRVPYPRIPL------KDVVPHVEK--GY------------------------------------- 216 (256)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHhc--CC-------------------------------------
Confidence 9999999999997 9999964431 111110000 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..+|++|||++++++.
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 217 --RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred --CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 001123345788899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=273.81 Aligned_cols=244 Identities=19% Similarity=0.308 Sum_probs=192.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+|++.+.||+|+||.||+|.+. ++..+|+|.+.........+.+|+.+++.+ .|+|++++++.+.
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~~ 69 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKL--------------SHPNLVQLYGVCT 69 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhC--------------CCCCEEEEEEEEc
Confidence 6889999999999999999876 466799999876554556778899999998 7899999988776
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++|||++ +++|.+++.... ..+++..+..++.|++.|+++||++ |++|+||||+||+++.++
T Consensus 70 ----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~------ 137 (256)
T cd05059 70 ----KQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDN------ 137 (256)
T ss_pred ----CCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCC------
Confidence 556789999999 778888876543 3588999999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-C---CCCCCCCCchhHHHhcCCCCc
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-A---DEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-~---~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++++|||.++...... . ...++..|+|||.+.+..++.
T Consensus 138 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~ 180 (256)
T cd05059 138 -------------------------------------VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSS 180 (256)
T ss_pred -------------------------------------cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCc
Confidence 49999999887543221 1 112345799999999888999
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|+||||+++|++++ |..||...+. ......+.. +.
T Consensus 181 ~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~--~~---------------------------------- 218 (256)
T cd05059 181 KSDVWSFGVLMWEVFSEGKMPYERFSN------SEVVESVSA--GY---------------------------------- 218 (256)
T ss_pred hhhHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHHHc--CC----------------------------------
Confidence 9999999999999998 8999965431 111111111 00
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|++|||+.|+++.
T Consensus 219 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 219 -----RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred -----cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 001123456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=276.09 Aligned_cols=249 Identities=20% Similarity=0.313 Sum_probs=190.8
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
.+++|++.++||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+ .|+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~ 69 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF--------------NCH 69 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCC
Confidence 45789999999999999999998653 35679999876432 1234567888888888 889
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
|++++++.+. .+...++||||+ +++|.+++.... ...++...+..++.|++.||+|||+. |++|+|
T Consensus 70 ~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~d 144 (277)
T cd05062 70 HVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRD 144 (277)
T ss_pred CeeeEEEEEc----CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCC
Confidence 9999988875 566799999998 778888775432 12356778889999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADE 244 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~ 244 (393)
|||+||+++.++ .++|+|||++...... ....
T Consensus 145 lkp~Nil~~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~ 181 (277)
T cd05062 145 LAARNCMVAEDF-------------------------------------------TVKIGDFGMTRDIYETDYYRKGGKG 181 (277)
T ss_pred cchheEEEcCCC-------------------------------------------CEEECCCCCccccCCcceeecCCCC
Confidence 999999998665 4999999998754321 1123
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
.++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+. ......+.. +..
T Consensus 182 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~------~~~~~~~~~--~~~-------------- 239 (277)
T cd05062 182 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN------EQVLRFVME--GGL-------------- 239 (277)
T ss_pred ccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc--CCc--------------
Confidence 44678999999998889999999999999999998 7889865431 111111110 100
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||++|||+.|++++
T Consensus 240 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 240 -------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01123345678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=269.98 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=195.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.++.. ....+.+.+|+.+++.+ .|++++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~--------------~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL--------------DHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC--------------CCCCeeee
Confidence 4799999999999999999999999999999987632 22245678899999998 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+. .+...+++|||+ +++|.+++... ....++...+..++.|++.||+|||+. |++|+||+|+||+++.+
T Consensus 68 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~ 142 (267)
T cd08224 68 LASFI----ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITAT 142 (267)
T ss_pred eeeee----cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCC
Confidence 99887 566789999999 67888877542 223478999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .++|+|||.+...... .....++..|+|||.+.
T Consensus 143 ~-------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~ 179 (267)
T cd08224 143 G-------------------------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179 (267)
T ss_pred C-------------------------------------------cEEEeccceeeeccCCCcccceecCCccccCHHHhc
Confidence 6 4899999988755332 22346788899999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|+||||+++|+|++|+.||...... .......+.. +..+
T Consensus 180 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--~~~~--------------------------- 226 (267)
T cd08224 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEK--CDYP--------------------------- 226 (267)
T ss_pred cCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHHHhhhhc--CCCC---------------------------
Confidence 888999999999999999999999999643311 0000000000 0000
Q ss_pred cchhHHHHhhhccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+.+ ...+..+.++|.+||..+|.+|||+.++++
T Consensus 227 ------------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 227 ------------PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ------------CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 011 134567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=278.69 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=198.6
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.|...++||+|+||.||+|.+..+++.|++|.+..... ....+.+|+.+++.+ .|+|++++.
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 87 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL--------------KHPNTIEYK 87 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC--------------CCCCCccEE
Confidence 58888999999999999999999999999998864322 224567888999988 789999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....++||||+.+++.+.+.... ..++..++..++.|++.|++|||++ |++|+||+|+||+++.++
T Consensus 88 ~~~~----~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~--- 158 (313)
T cd06633 88 GCYL----KEHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPG--- 158 (313)
T ss_pred EEEE----eCCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCC---
Confidence 8887 567789999999888888776543 4588999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh---cCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI---GAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~ 261 (393)
.++|+|||++.... ......++..|+|||.+. ...+
T Consensus 159 ----------------------------------------~~kL~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~ 197 (313)
T cd06633 159 ----------------------------------------QVKLADFGSASKSS-PANSFVGTPYWMAPEVILAMDEGQY 197 (313)
T ss_pred ----------------------------------------CEEEeecCCCcccC-CCCCccccccccChhhccccCCCCC
Confidence 49999999876432 223456788999999985 3457
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ...+..+.. ...|..
T Consensus 198 ~~~sDv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~--~~~~~~----------------------------- 240 (313)
T cd06633 198 DGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQ--NDSPTL----------------------------- 240 (313)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHh--cCCCCC-----------------------------
Confidence 8899999999999999999999965441 111111111 000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+..+.+|+.+||..+|.+||++.+++.||||+...
T Consensus 241 ---------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 241 ---------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred ---------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 0112345678999999999999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=278.03 Aligned_cols=252 Identities=24% Similarity=0.388 Sum_probs=196.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.|+...+||+|+||.||++....+++.||+|.+.... .....+.+|+.+++.+ .|+|++++++.+
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~ 86 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY--------------QHENVVEMYNSY 86 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc--------------CCcchhheeeEE
Confidence 3444568999999999999999999999999875322 2345577899999988 789999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+.+.+++|||+ ++++.+.+.. ..+++..+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 87 ~----~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~----- 153 (292)
T cd06657 87 L----VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDG----- 153 (292)
T ss_pred E----eCCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC-----
Confidence 7 567899999999 5566665433 2478999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||.+...... .....++..|++||.+.+..++.
T Consensus 154 --------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~ 195 (292)
T cd06657 154 --------------------------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGP 195 (292)
T ss_pred --------------------------------------CEEEcccccceecccccccccccccCccccCHHHhcCCCCCc
Confidence 4999999987654322 12245788999999998888899
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++|+||+|+++|+|++|..||.... ....+..+... .|.
T Consensus 196 ~~Dv~slGvil~el~tg~~p~~~~~------~~~~~~~~~~~---~~~-------------------------------- 234 (292)
T cd06657 196 EVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN---LPP-------------------------------- 234 (292)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhh---CCc--------------------------------
Confidence 9999999999999999999996533 11121111110 000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
........+..+.+++.+||..||.+||++.++++||||....
T Consensus 235 ----~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 235 ----KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred ----ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 0000123455678999999999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=278.48 Aligned_cols=258 Identities=19% Similarity=0.298 Sum_probs=196.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|++|.||+|.+..+++.||+|.++.... ....+..|+.++... ..|+|++++++
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~-------------~~~~~i~~~~~ 81 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS-------------HDCPYIVKCYG 81 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc-------------cCCCchHhhhe
Confidence 579999999999999999999999999999999875422 223344555555444 16899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....+++||++++++.+.+.... ..+++..+..++.|++.|++|||+..|++||||+|+||+++.++
T Consensus 82 ~~~----~~~~~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~---- 152 (296)
T cd06618 82 YFI----TDSDVFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG---- 152 (296)
T ss_pred eee----cCCeEEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC----
Confidence 887 566799999999887777765533 35889999999999999999999733999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC---
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG--- 260 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~--- 260 (393)
.++|+|||.+...... .....++..|+|||.+.+..
T Consensus 153 ---------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 193 (296)
T cd06618 153 ---------------------------------------NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNP 193 (296)
T ss_pred ---------------------------------------CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCcc
Confidence 4999999998755322 22335678899999987653
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|+|++|+.||..... ....+. ........
T Consensus 194 ~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~---~~~~~~~~---------------------------- 237 (296)
T cd06618 194 KYDIRADVWSLGISLVELATGQFPYKNCKT-----EFEVLT---KILQEEPP---------------------------- 237 (296)
T ss_pred ccccchhHHHHHHHHHHHHhCCCCCCcchh-----HHHHHH---HHhcCCCC----------------------------
Confidence 78899999999999999999999954221 111111 11111000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+.....+..+.+||.+||..||.+||+++++++||||....
T Consensus 238 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 238 --------SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred --------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 0000112456788999999999999999999999999998654
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=269.25 Aligned_cols=247 Identities=29% Similarity=0.477 Sum_probs=200.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.+.||+|++|.||+|.+..+++.|++|.+..... ..+.+.+|++++..+ .|++++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL--------------KHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC--------------CCCCccEEEE
Confidence 58999999999999999999999999999999876542 345678899999988 7888988888
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...+++||++ +++|.+.+... ..+++..+..++.|++.|+.+||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~--- 136 (254)
T cd06627 67 SIE----TSDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDG--- 136 (254)
T ss_pred EEE----eCCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCC---
Confidence 876 557799999999 66887777654 4589999999999999999999998 999999999999997655
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+....... ....++..|++||...+..+
T Consensus 137 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~ 176 (254)
T cd06627 137 ----------------------------------------VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGA 176 (254)
T ss_pred ----------------------------------------CEEEeccccceecCCCcccccccccchhhcCHhhhcCCCC
Confidence 49999999987654332 23457889999999988778
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||..... ......... .
T Consensus 177 ~~~~Dv~~lG~~l~~l~~g~~p~~~~~~------~~~~~~~~~--~---------------------------------- 214 (254)
T cd06627 177 STASDIWSLGCTVIELLTGNPPYYDLNP------MAALFRIVQ--D---------------------------------- 214 (254)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhc--c----------------------------------
Confidence 8999999999999999999999964331 111111100 0
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
....++...+..+.+++.+||..+|++|||+.+++.||||
T Consensus 215 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 215 -----DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 0111234456788899999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=276.78 Aligned_cols=253 Identities=19% Similarity=0.276 Sum_probs=194.6
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
....++|.+.+.||+|+||.||+|... .++..||+|.++... ...+.+.+|+.+++.+. .
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~ 97 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-------------N 97 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-------------C
Confidence 344578999999999999999999753 345679999887532 22356788999999883 5
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+. ..+..+++|||+ +++|.+++.......+++.++..++.|++.||+|||++ +++|+||||+||
T Consensus 98 h~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Ni 172 (302)
T cd05055 98 HENIVNLLGACT----IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNV 172 (302)
T ss_pred CCCcceEEEEEe----cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceE
Confidence 889999998876 556789999998 68888888654434488999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQY 250 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y 250 (393)
+++.++ .++++|||++....... ....++..|
T Consensus 173 l~~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y 209 (302)
T cd05055 173 LLTHGK-------------------------------------------IVKICDFGLARDIMNDSNYVVKGNARLPVKW 209 (302)
T ss_pred EEcCCC-------------------------------------------eEEECCCcccccccCCCceeecCCCCccccc
Confidence 997655 48999999987543221 122346789
Q ss_pred chhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 251 RSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 251 ~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
+|||.+.+..++.++||||+||++|+|++ |..||.+... ......... .+..
T Consensus 210 ~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~------~~~~~~~~~-~~~~-------------------- 262 (302)
T cd05055 210 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV------DSKFYKLIK-EGYR-------------------- 262 (302)
T ss_pred CCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc------hHHHHHHHH-cCCc--------------------
Confidence 99999998889999999999999999998 9999975442 111111110 0000
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|++|||+.|+++.
T Consensus 263 -------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 263 -------------------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred -------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 00112345678899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0665|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=270.76 Aligned_cols=293 Identities=31% Similarity=0.435 Sum_probs=231.2
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++-.||.-+.-+|.|+- .|-.|.+...++.||+|.+.. ......+..+|+.++..+ .|+|++
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v--------------~~~nii 78 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV--------------NHKNII 78 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh--------------ccccee
Confidence 34568999999999999 788898999999999997643 244567788999999999 899999
Q ss_pred eccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 102 RLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+|..... .-..+++|||++..++...+... +.-+.+..++.|++.|+.+||+. ||+||||||+||++..
T Consensus 79 ~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~ 153 (369)
T KOG0665|consen 79 SLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILME----LDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNS 153 (369)
T ss_pred eeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecc
Confidence 99998864321 22357899999999999888733 67789999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~ 257 (393)
+. .+|+.|||+++..+.. .++.+.|..|+|||++.
T Consensus 154 ~~-------------------------------------------~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil 190 (369)
T KOG0665|consen 154 DC-------------------------------------------TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVIL 190 (369)
T ss_pred hh-------------------------------------------heeeccchhhcccCcccccCchhheeeccCchhee
Confidence 76 4999999999876543 55678899999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC---CCeeecc
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ---GNFRRID 334 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~ 334 (393)
+.++...+||||+||++.||+.|...|++.. ..++.-.+++.+|.....+..+....-+.+-.. .......
T Consensus 191 ~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d------~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~ 264 (369)
T KOG0665|consen 191 GMGYKENVDIWSVGCIMGELILGTVLFPGKD------HIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFS 264 (369)
T ss_pred ccCCcccchhhhhhhHHHHHhhceEEecCch------HHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchh
Confidence 9999999999999999999999999999766 788888999999988777766655443333221 0111111
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+... ++...+.+...+..+.+++.+||..||++|.+++++|+||||+ +|
T Consensus 265 ~~fpD~~---f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~-vw 316 (369)
T KOG0665|consen 265 ELFPDSL---FPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK-VW 316 (369)
T ss_pred hhCCccc---ccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee-ee
Confidence 1111100 1111222334567888999999999999999999999999998 54
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=276.32 Aligned_cols=256 Identities=29% Similarity=0.433 Sum_probs=204.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..+.|++.+.||+|++|.||+|.+..++..|++|++.........+.+|+..++.+ .|+|++++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 82 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC--------------KHPNIVDYYD 82 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC--------------CCCCeeEEEE
Confidence 45689999999999999999999998899999999876543456678899999988 7899999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....++++||+ +++|.+.+.... ..++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 83 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~--- 153 (286)
T cd06614 83 SYL----VGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDG--- 153 (286)
T ss_pred EEE----ECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCC---
Confidence 887 457899999999 588888887653 3589999999999999999999998 999999999999998666
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+..+
T Consensus 154 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~ 193 (286)
T cd06614 154 ----------------------------------------SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDY 193 (286)
T ss_pred ----------------------------------------CEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCC
Confidence 4999999987654322 123346788999999988888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|..||...+. ......+.. .+. +.
T Consensus 194 ~~~~Dv~slGvil~~l~~g~~p~~~~~~------~~~~~~~~~-~~~-~~------------------------------ 235 (286)
T cd06614 194 GPKVDIWSLGIMCIEMAEGEPPYLREPP------LRALFLITT-KGI-PP------------------------------ 235 (286)
T ss_pred CCccccHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-cCC-CC------------------------------
Confidence 9999999999999999999999964331 111111100 000 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.......+..+.++|++||+.+|.+|||+.++++||||+..
T Consensus 236 -------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 236 -------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred -------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 00011245678899999999999999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0668|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-38 Score=261.14 Aligned_cols=300 Identities=23% Similarity=0.416 Sum_probs=222.5
Q ss_pred CCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcc
Q psy12288 11 EYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
+|+-=....+.-|+ .++|++.+++|+|.|+.||.|.+..+++.++||+++.- ....+.+|+.+|+.+.
T Consensus 23 eYWdYE~~~i~wg~--~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~-------- 90 (338)
T KOG0668|consen 23 EYWDYESLVIDWGN--QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLR-------- 90 (338)
T ss_pred hhcchhheeeeccc--cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhcc--------
Confidence 34443333444443 57899999999999999999999999999999999853 3578899999999994
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
+++||++++++... +....+.+|+|++...-+..+- ++++.-.++.++.++++||.|+|+. ||.|||+
T Consensus 91 -----gg~NIi~L~DiV~D--p~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~-GImHRDV 158 (338)
T KOG0668|consen 91 -----GGPNIIKLLDIVKD--PESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDV 158 (338)
T ss_pred -----CCCCeeehhhhhcC--ccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhc-CcccccC
Confidence 79999999999873 3556688999999655555443 3478889999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTR 248 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~ 248 (393)
||.|++++.... .++|+|+|+|....... .-.+.+.
T Consensus 159 KPhNvmIdh~~r------------------------------------------kLrlIDWGLAEFYHp~~eYnVRVASR 196 (338)
T KOG0668|consen 159 KPHNVMIDHELR------------------------------------------KLRLIDWGLAEFYHPGKEYNVRVASR 196 (338)
T ss_pred Ccceeeechhhc------------------------------------------eeeeeecchHhhcCCCceeeeeeehh
Confidence 999999976543 48999999998775443 3446688
Q ss_pred CCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCC-CCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 249 QYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFD-PKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 249 ~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~-~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
.|.-||++..-+ |..+.|+|||||++..|++.+-||- +.+ ..+++..|.+++|.-- +..=..+..--.++
T Consensus 197 yfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d------N~DQLVkIakVLGt~e--l~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD------NYDQLVKIAKVLGTDE--LYAYLNKYQIDLDP 268 (338)
T ss_pred hcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC------CHHHHHHHHHHhChHH--HHHHHHHHccCCCh
Confidence 999999998754 7899999999999999999888774 444 7789999999988421 11100111000111
Q ss_pred CCCeeeccC---CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 327 QGNFRRIDN---LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 327 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
. +..+.+ ..+|..+ +-.++- .-.+++++||+.++|..|-++|+||+|++.||||..+.
T Consensus 269 ~--~~~i~~~~~rk~w~~F-i~~~n~---hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 269 Q--FEDILGRHSRKPWSRF-INSENQ---HLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred h--HhhHhhccccccHHHh-CCcccc---ccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 0 000000 1111110 011111 23457889999999999999999999999999998654
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=276.35 Aligned_cols=246 Identities=21% Similarity=0.334 Sum_probs=191.4
Q ss_pred CeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|.+.+.||+|+||.||++... .++..+|+|.+.... .....+.+|+.+++.+ .|++++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 70 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL--------------QHEHIV 70 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC--------------CCCCcc
Confidence 57999999999999999999753 345678999886432 2345678899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
++.+.+. .+..++++|||+ +++|.+++.... ...+++..+..++.|++.||+|||++ |++|||
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~d 145 (288)
T cd05093 71 KFYGVCV----EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRD 145 (288)
T ss_pred eEEEEEe----cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ceeecc
Confidence 9998876 567799999999 788888775432 12488999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADE 244 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~ 244 (393)
|||+||+++.++ .++|+|||++....... ...
T Consensus 146 lkp~Nili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~ 182 (288)
T cd05093 146 LATRNCLVGENL-------------------------------------------LVKIGDFGMSRDVYSTDYYRVGGHT 182 (288)
T ss_pred cCcceEEEccCC-------------------------------------------cEEeccCCccccccCCceeecCCCC
Confidence 999999998766 49999999987553221 122
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
.++..|+|||.+.+..++.++|+|||||++|+|++ |..||..... ......+.. +..+
T Consensus 183 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~------~~~~~~i~~--~~~~------------- 241 (288)
T cd05093 183 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECITQ--GRVL------------- 241 (288)
T ss_pred CccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc--CCcC-------------
Confidence 34678999999998889999999999999999998 9999965441 111111111 1100
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+...+..+.+|+.+||..||.+|||+++++.
T Consensus 242 --------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 242 --------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred --------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 011234567899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=275.10 Aligned_cols=247 Identities=17% Similarity=0.261 Sum_probs=190.9
Q ss_pred CeEEEEEEecccCceEEEEEEeC----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|++.++||+|+||.||+|... .++..|++|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv 70 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL--------------HHPNIV 70 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC--------------CCCCee
Confidence 46899999999999999999853 3457899998874322 224577899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD---------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
++++.+. .+...+++|||+ +++|.+++.... ...++...+..++.|++.||+|||++ |+
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i 145 (283)
T cd05090 71 CLLGVVT----QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FF 145 (283)
T ss_pred eEEEEEe----cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-Ce
Confidence 9998876 566789999999 678888774321 12367888899999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+|+||||+||+++.+. .++|+|||++......
T Consensus 146 ~H~dlkp~nili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~ 182 (283)
T cd05090 146 VHKDLAARNILIGEQL-------------------------------------------HVKISDLGLSREIYSADYYRV 182 (283)
T ss_pred ehhccccceEEEcCCC-------------------------------------------cEEeccccccccccCCcceec
Confidence 9999999999998665 4899999998754322
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.+ .......+ ....
T Consensus 183 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~------~~~~~~~~-~~~~------------ 243 (283)
T cd05090 183 QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS------NQEVIEMV-RKRQ------------ 243 (283)
T ss_pred ccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHH-HcCC------------
Confidence 122334667999999988889999999999999999998 999996543 11111111 1000
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||+.||++||++.+++++
T Consensus 244 ----------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 244 ----------------------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred ----------------------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 001223455678899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=275.44 Aligned_cols=272 Identities=16% Similarity=0.152 Sum_probs=188.5
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc-ccccCcc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS-SAYNTQA 96 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~-~~~~~~~ 96 (393)
.+.+..+.+|++.++||+|+||.||+|.+..+ +..+++|+..... +....|...++.+.....+.. .......
T Consensus 5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~---~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (294)
T PHA02882 5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN---ETIVMETLVYNNIYDIDKIALWKNIHNID 81 (294)
T ss_pred eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC---CchhhHHHHHHhhhhHHHHHHHHHhccCC
Confidence 46777788999999999999999999998877 6677888644221 122223222222211110000 0011236
Q ss_pred cccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
|++++++++..........+.+++++++..++.+.+... ...+...+..++.|++.||+|||+. +++||||||+|||
T Consensus 82 h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nil 158 (294)
T PHA02882 82 HLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIM 158 (294)
T ss_pred CCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEE
Confidence 888888887665433334466888998877777666543 2357788899999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------CCCCCCC
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----------HFADEIQ 246 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----------~~~~~~~ 246 (393)
++.++ .++|+|||+++.... ......|
T Consensus 159 l~~~~-------------------------------------------~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~g 195 (294)
T PHA02882 159 VDGNN-------------------------------------------RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRG 195 (294)
T ss_pred EcCCC-------------------------------------------cEEEEEcCCceeeccCCcccccccccccccCC
Confidence 97665 489999999875421 1122368
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHH-HHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHI-VELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
|+.|+|||+..+..++.++|||||||++|+|++|..||...+... ...... ......+
T Consensus 196 t~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-----~~~~~~~~~~~~~~---------------- 254 (294)
T PHA02882 196 TLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-----NLIHAAKCDFIKRL---------------- 254 (294)
T ss_pred CccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-----HHHHHhHHHHHHHh----------------
Confidence 999999999999999999999999999999999999997653211 000000 0000100
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....... ...+..+.+++..|+..+|++||+.+++++
T Consensus 255 -------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 255 -------------------HEGKIKI-KNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred -------------------hhhhhcc-CCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 0000011 233567889999999999999999999875
|
|
| >KOG1026|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=300.54 Aligned_cols=244 Identities=22% Similarity=0.334 Sum_probs=201.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+-++.+.||+|+||.||+|+...- .+.||||.++.... ..++|++|++++..+ .|+|||
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l--------------~H~nIV 552 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL--------------QHPNIV 552 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc--------------cCCCeE
Confidence 456789999999999999976543 35799999985433 467899999999999 999999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CC----CCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YK----GIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~----~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
++++.+. .+...++|+||| -|||..++.... .. .++..+.+.|+.||+.|++||-++ ..|||
T Consensus 553 rLlGVC~----~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHR 627 (774)
T KOG1026|consen 553 RLLGVCR----EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHR 627 (774)
T ss_pred EEEEEEc----cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-ccccc
Confidence 9999998 788899999999 899999886432 12 278889999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCC----
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE---- 244 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~---- 244 (393)
||-.+|+||..+- .+|++|||+++..-......
T Consensus 628 DLATRNCLVge~l-------------------------------------------~VKIsDfGLsRdiYssDYYk~~~~ 664 (774)
T KOG1026|consen 628 DLATRNCLVGENL-------------------------------------------VVKISDFGLSRDIYSSDYYKVRGN 664 (774)
T ss_pred chhhhhceeccce-------------------------------------------EEEecccccchhhhhhhhhcccCC
Confidence 9999999998766 59999999998764433222
Q ss_pred -CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc
Q psy12288 245 -IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322 (393)
Q Consensus 245 -~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 322 (393)
.-+..||+||.+...+||++|||||+||++||+++ |+-||.+.+.. +.++.+.. |
T Consensus 665 t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~------EVIe~i~~--g--------------- 721 (774)
T KOG1026|consen 665 TLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ------EVIECIRA--G--------------- 721 (774)
T ss_pred ceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH------HHHHHHHc--C---------------
Confidence 33678999999999999999999999999999999 99999887732 22222211 1
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
...+.|..++.++.+||.+||+.+|.+||+++||-
T Consensus 722 ------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 722 ------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred ------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 11335678899999999999999999999999863
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=277.63 Aligned_cols=254 Identities=23% Similarity=0.324 Sum_probs=199.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...|+..+.||+|+||.||+|.+..++..||+|.+..... ....+.+|+.+++.+ .|+|+++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI--------------KHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC--------------CCCCEEE
Confidence 3468899999999999999999999999999998864321 123567788899888 7899999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++.+. .+...++||||+.+++.+.+.... ..+++..+..++.|++.||.|||++ |++|+||+|+||+++.++
T Consensus 90 ~~~~~~----~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~- 162 (317)
T cd06635 90 YKGCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPG- 162 (317)
T ss_pred EEEEEe----eCCeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCC-
Confidence 999887 566789999999888887775433 4488999999999999999999998 999999999999997765
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh---cC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI---GA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~---~~ 259 (393)
.++|+|||++..... .....++..|+|||.+. ..
T Consensus 163 ------------------------------------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~ 199 (317)
T cd06635 163 ------------------------------------------QVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEG 199 (317)
T ss_pred ------------------------------------------CEEEecCCCccccCC-cccccCCccccChhhhhcCCCC
Confidence 499999998764432 23446788999999985 34
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+|||||++|+|++|+.||.... .......+.....+ .
T Consensus 200 ~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~~~~--~---------------------------- 243 (317)
T cd06635 200 QYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP--T---------------------------- 243 (317)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhccCC--C----------------------------
Confidence 57889999999999999999999986432 11111111110000 0
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
......+..+.+++.+||..+|.+||++.++++|+|+....
T Consensus 244 ----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 244 ----------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred ----------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 00123456788999999999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=279.05 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=199.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...|+..+.||+|++|.||+|.+..+++.+++|.+.... .....+.+|+.+++.+ .|+++++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL--------------RHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC--------------CCCCccc
Confidence 346888999999999999999999999999999876421 1224566789999998 7889999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+.+. .....++||||+.+++.+.+.... ..++..++..++.|++.|+.|||++ +++|+||+|+||+++.++
T Consensus 80 ~~~~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~- 152 (308)
T cd06634 80 YRGCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPG- 152 (308)
T ss_pred EEEEEE----cCCeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCC-
Confidence 988877 556789999999888887765433 4488999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc---C
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG---A 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~---~ 259 (393)
.++|+|||++..... .....++..|+|||.+.+ .
T Consensus 153 ------------------------------------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~ 189 (308)
T cd06634 153 ------------------------------------------LVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEG 189 (308)
T ss_pred ------------------------------------------cEEECCcccceeecC-cccccCCccccCHHHHhhcccC
Confidence 499999998765433 234467889999999853 3
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|||||||++|+|++|..||...+. ......+.. +..|.
T Consensus 190 ~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~--~~~~~---------------------------- 233 (308)
T cd06634 190 QYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQ--NESPA---------------------------- 233 (308)
T ss_pred CCCcccchHHHHHHHHHHHcCCCCCccccH------HHHHHHHhh--cCCCC----------------------------
Confidence 578899999999999999999999864321 111111100 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
......+..+.++|++||..+|.+||++.++++|||+.....
T Consensus 234 ----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 234 ----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred ----------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 001245667889999999999999999999999999987653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=272.57 Aligned_cols=249 Identities=24% Similarity=0.329 Sum_probs=194.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|++|.||+|.+..++..+++|.+.... .....+.+|+.+++.+ .|+|++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL--------------NHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc--------------cCCchhhh
Confidence 46899999999999999999999999999999876421 2235667899999998 88999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+. .++..+++||++ +++|.+.+... ....+++..+..++.|++.||+|||++ |++|+||+|+||+++.+
T Consensus 68 ~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~ 142 (267)
T cd08229 68 YASFI----EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITAT 142 (267)
T ss_pred hheeE----eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCC
Confidence 99887 566899999999 67887776532 223478899999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .++++|||.+...... .....++..|+|||.+.
T Consensus 143 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~ 179 (267)
T cd08229 143 G-------------------------------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179 (267)
T ss_pred C-------------------------------------------CEEECcchhhhccccCCcccccccCCcCccCHHHhc
Confidence 6 4999999987655322 22346788999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|+||||+++|+|++|..||...... .......+... ..|.
T Consensus 180 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~--~~~~-------------------------- 227 (267)
T cd08229 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEQC--DYPP-------------------------- 227 (267)
T ss_pred CCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhhhhcC--CCCC--------------------------
Confidence 888899999999999999999999999643311 00111111000 0000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+...+..+.+++.+||..||.+|||+.++++
T Consensus 228 ------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 228 ------------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 001235668889999999999999999998775
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=274.39 Aligned_cols=255 Identities=22% Similarity=0.359 Sum_probs=197.6
Q ss_pred eEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.|++.+.||.|+||.||+|.+. .+++.||+|++.... ...+.+.+|+.+++.+. .|+++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------------~~~~i 67 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-------------QSPFL 67 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc-------------cCCCh
Confidence 4899999999999999999875 478899999987432 22355678999998883 57888
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .+...++||||+ +++|.+.+... ..++...+..++.|++.||.+||+. |++||||+|+||+++.
T Consensus 68 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~ 140 (290)
T cd05613 68 VTLHYAFQ----TDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDS 140 (290)
T ss_pred hceeeEee----cCCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECC
Confidence 88888876 566789999999 67888887664 3488899999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++...... .....++..|+|||.
T Consensus 141 ~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 177 (290)
T cd05613 141 NG-------------------------------------------HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDI 177 (290)
T ss_pred CC-------------------------------------------CEEEeeCccceecccccccccccccCCcccCChhh
Confidence 65 4999999988765332 123457889999999
Q ss_pred HhcC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 256 LIGA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 256 ~~~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+... .++.++|+||||+++|+|++|..||........ .......+..
T Consensus 178 ~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~----------------------------- 226 (290)
T cd05613 178 VRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILK----------------------------- 226 (290)
T ss_pred ccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhc-----------------------------
Confidence 8763 467899999999999999999999964332110 0011111100
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~~ 390 (393)
...+++...+..+.+++++||..||.+|| ++++++.||||....
T Consensus 227 -------------~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 227 -------------SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred -------------cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 00112234556788999999999999997 899999999998764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=303.53 Aligned_cols=199 Identities=22% Similarity=0.376 Sum_probs=165.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+|++.++||+|+||.||+|.+..+++.||+|++..+. ...+++.+|+.+++.+ .|+|++++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L--------------~HPNIVkl 67 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL--------------IHPGIVPV 67 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC--------------CCcCcCeE
Confidence 47999999999999999999999999999999986432 2235677899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD---------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
++.+. .++..+++|||+ +++|.+.+.... ...++...+..++.|++.||+|||++ |++||||||+
T Consensus 68 ~~v~~----d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPe 142 (932)
T PRK13184 68 YSICS----DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPD 142 (932)
T ss_pred EEEEe----eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchh
Confidence 88776 567899999999 778887775321 12245667888999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------------
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------------- 240 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------------- 240 (393)
||+++.++ .++++|||++......
T Consensus 143 NILLd~dg-------------------------------------------~vKLiDFGLAk~i~~~~~~~~~l~~~~~~ 179 (932)
T PRK13184 143 NILLGLFG-------------------------------------------EVVILDWGAAIFKKLEEEDLLDIDVDERN 179 (932)
T ss_pred eEEEcCCC-------------------------------------------CEEEEecCcceeccccccccccccccccc
Confidence 99998776 4899999998754110
Q ss_pred --------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 241 --------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 241 --------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
....+||+.|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 180 s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~ 235 (932)
T PRK13184 180 ICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK 235 (932)
T ss_pred ccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence 112368999999999999989999999999999999999999997533
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=276.51 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=189.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc--eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT--FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|....++. .+++|.++.. ....+.+.+|+.++..+. .|+|++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-------------~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG-------------HHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc-------------CCCchhhe
Confidence 479999999999999999999887765 4688877632 222356778999888873 58899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
++.+. ....++++|||+ +++|.+++.... ...++...+..++.|++.||++||++ |++||
T Consensus 69 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~ 143 (297)
T cd05089 69 LGACE----NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHR 143 (297)
T ss_pred EEEEc----cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccC
Confidence 98876 556789999998 678888875432 12477889999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC--CCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~ 246 (393)
||||+||+++.++ .++|+|||++........ ....
T Consensus 144 dlkp~Nill~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~ 180 (297)
T cd05089 144 DLAARNVLVGENL-------------------------------------------ASKIADFGLSRGEEVYVKKTMGRL 180 (297)
T ss_pred cCCcceEEECCCC-------------------------------------------eEEECCcCCCccccceeccCCCCc
Confidence 9999999998766 489999998864322211 1223
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+..|+|||++.+..++.++|||||||++|+|++ |..||..... ......+.. +.
T Consensus 181 ~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~------~~~~~~~~~--~~----------------- 235 (297)
T cd05089 181 PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC------AELYEKLPQ--GY----------------- 235 (297)
T ss_pred CccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhc--CC-----------------
Confidence 557999999998889999999999999999997 9999965441 111111100 00
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+|+.+||..||.+|||++++++.
T Consensus 236 ----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 ----------------------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred ----------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123355678899999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=280.71 Aligned_cols=245 Identities=21% Similarity=0.298 Sum_probs=190.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCce----EEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTF----VALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|+||.||+|.+..+++. ||+|.++... ...+.+.+|+.+++.+ .|+|++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~niv 72 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV--------------DNPHVC 72 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCCC
Confidence 5799999999999999999988766553 8999886432 2345677899999988 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. . ...+++++++ ++++.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 73 ~~~g~~~----~-~~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~ 145 (316)
T cd05108 73 RLLGICL----T-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTP 145 (316)
T ss_pred eEEEEEc----C-CCceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCC
Confidence 9998775 2 2367899998 788888886543 3478888999999999999999998 99999999999999776
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~ 255 (393)
+ .++|+|||++........ ....+..|+|||.
T Consensus 146 ~-------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~ 182 (316)
T cd05108 146 Q-------------------------------------------HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALES 182 (316)
T ss_pred C-------------------------------------------cEEEccccccccccCCCcceeccCCccceeecChHH
Confidence 6 499999999886542211 1223567999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|+|++ |..||.+... ..+..+......
T Consensus 183 ~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~-------------------------- 229 (316)
T cd05108 183 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-------SEISSILEKGER-------------------------- 229 (316)
T ss_pred hccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHhCCCC--------------------------
Confidence 999889999999999999999997 9999965331 111111110000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+..++..+.+++.+||..||.+||++.+++.+
T Consensus 230 --------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 230 --------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred --------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 01112344578899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=277.91 Aligned_cols=247 Identities=20% Similarity=0.248 Sum_probs=189.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCce--EEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTF--VALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+|++.+.||+|+||.||+|.+..++.. +++|.++.. ......+.+|+.++..+. .|+|++++.
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-------------~h~~iv~~~ 74 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-------------HHPNIINLL 74 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-------------CCCCcceEE
Confidence 689999999999999999998877754 577766532 222345678999988883 688999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
+.+. .++.++++|||+ +++|.+++.... ...++...+..++.|++.|++|||++ |++|||
T Consensus 75 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~d 149 (303)
T cd05088 75 GACE----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRD 149 (303)
T ss_pred EEEC----CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-Cccccc
Confidence 8876 566799999999 788888876432 12478889999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQT 247 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t 247 (393)
|||+||+++.++ .++|+|||++....... ....++
T Consensus 150 lkp~Nili~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~ 186 (303)
T cd05088 150 LAARNILVGENY-------------------------------------------VAKIADFGLSRGQEVYVKKTMGRLP 186 (303)
T ss_pred cchheEEecCCC-------------------------------------------cEEeCccccCcccchhhhcccCCCc
Confidence 999999998766 49999999886432211 112335
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
..|+|||.+.+..++.++|||||||++|+|++ |..||..... .+....+ ....
T Consensus 187 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~---~~~~----------------- 240 (303)
T cd05088 187 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKL---PQGY----------------- 240 (303)
T ss_pred ccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh------HHHHHHH---hcCC-----------------
Confidence 67999999988888999999999999999998 9999964431 1111110 0000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.+++.+||..+|.+||++++++++
T Consensus 241 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 ---------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ---------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000112345678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=285.57 Aligned_cols=250 Identities=18% Similarity=0.244 Sum_probs=191.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.+... ...||||++.... ...+.+.+|+.+++.+. .|+|
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-------------~Hpn 102 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-------------PHLN 102 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-------------CCCC
Confidence 46889999999999999999987533 3469999986432 22456788999999982 4999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
|+++++.+. .....++||||+ +++|.+++....
T Consensus 103 Iv~l~~~~~----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (400)
T cd05105 103 IVNLLGACT----KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYM 178 (400)
T ss_pred eeeEEEEEc----cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccc
Confidence 999999886 566799999999 788887764321
Q ss_pred ----------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 137 ----------------------------------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 137 ----------------------------------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
...++...+..++.|++.||+|||+. +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ 257 (400)
T cd05105 179 DMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-N 257 (400)
T ss_pred ccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-C
Confidence 12367778889999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---- 240 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---- 240 (393)
++|+||||+||+++.++ .++|+|||++......
T Consensus 258 ivH~dikp~Nill~~~~-------------------------------------------~~kL~DfGla~~~~~~~~~~ 294 (400)
T cd05105 258 CVHRDLAARNVLLAQGK-------------------------------------------IVKICDFGLARDIMHDSNYV 294 (400)
T ss_pred eeCCCCChHhEEEeCCC-------------------------------------------EEEEEeCCcceecccccccc
Confidence 99999999999998765 4999999998754321
Q ss_pred -CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 -FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
.....++..|+|||.+.+..++.++|||||||++|+|++ |..||...... ..+...... +.
T Consensus 295 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~------~~~~~~~~~-~~---------- 357 (400)
T cd05105 295 SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD------STFYNKIKS-GY---------- 357 (400)
T ss_pred ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh------HHHHHHHhc-CC----------
Confidence 122345678999999998889999999999999999997 99999653211 111111000 00
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.++.+.
T Consensus 358 -----------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 393 (400)
T cd05105 358 -----------------------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI 393 (400)
T ss_pred -----------------------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence 001123455678899999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0983|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=263.94 Aligned_cols=271 Identities=20% Similarity=0.318 Sum_probs=205.5
Q ss_pred CCCCccccccCCee---CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCC
Q psy12288 13 RPGGYCPVQIGDLF---NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 13 ~~~~~~~~~~~~~~---~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~ 87 (393)
.+.||-.+.-|+-. -++-+.+..||.|+.|.||+++.+.+|...|||.+..+.. ...++..++.++-.-
T Consensus 74 ~~tg~lti~~g~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s------ 147 (391)
T KOG0983|consen 74 KQTGYLTIGGGQRYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS------ 147 (391)
T ss_pred CCceeEEecCCcccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc------
Confidence 35555544433311 1244567899999999999999999999999999875432 233444455444332
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.++|.|++.+++|. .+..++|.||.|..-...++.+-. +++++..+-++..-+.+||.||.++.+|+|
T Consensus 148 -------~dcpyIV~c~GyFi----~n~dV~IcMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viH 215 (391)
T KOG0983|consen 148 -------HDCPYIVQCFGYFI----TNTDVFICMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIH 215 (391)
T ss_pred -------cCCCeeeeeeeEEe----eCchHHHHHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceee
Confidence 16899999999998 566688999999655555554433 458888888999999999999999889999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~ 245 (393)
||+||+|||+|+.++ +||||||.+-++..+ .....
T Consensus 216 RDvKPSNILlDe~Gn-------------------------------------------iKlCDFGIsGrlvdSkAhtrsA 252 (391)
T KOG0983|consen 216 RDVKPSNILLDERGN-------------------------------------------IKLCDFGISGRLVDSKAHTRSA 252 (391)
T ss_pred cccCccceEEccCCC-------------------------------------------EEeecccccceeeccccccccc
Confidence 999999999998774 999999999877554 34457
Q ss_pred CCCCCchhHHHhcC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc
Q psy12288 246 QTRQYRSVEVLIGA---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322 (393)
Q Consensus 246 ~t~~y~aPE~~~~~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 322 (393)
|-+.|||||.+.-. .|.-.+||||||++++||+||.+||...+.. +..+-+++...|+-+
T Consensus 253 GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--------Fe~ltkvln~ePP~L--------- 315 (391)
T KOG0983|consen 253 GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--------FEVLTKVLNEEPPLL--------- 315 (391)
T ss_pred CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--------HHHHHHHHhcCCCCC---------
Confidence 88999999998643 5788999999999999999999999876532 222223333322211
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+....+++.|.+|+..||+.|+.+||.-.++|+|||++.
T Consensus 316 ---------------------------~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 316 ---------------------------PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred ---------------------------CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 111236789999999999999999999999999999864
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=272.42 Aligned_cols=248 Identities=20% Similarity=0.325 Sum_probs=193.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|..... +..||+|.+.... .....+.+|+.+++.+ .|++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~ 70 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF--------------NCHH 70 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC--------------CCCc
Confidence 46899999999999999999987644 3789999986443 2234567888989888 8899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
++++++.+. .+...+++|||+ +++|.+.+.... ...+++..+..++.|++.||.|||+. +++|+||
T Consensus 71 i~~~~~~~~----~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di 145 (277)
T cd05032 71 VVRLLGVVS----TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDL 145 (277)
T ss_pred eeEEEEEEc----CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ccccccc
Confidence 999999887 557799999999 688888875432 12367788999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEI 245 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~ 245 (393)
||+||+++.++ .++|+|||+++..... .....
T Consensus 146 ~p~nill~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~ 182 (277)
T cd05032 146 AARNCMVAEDL-------------------------------------------TVKIGDFGMTRDIYETDYYRKGGKGL 182 (277)
T ss_pred ChheEEEcCCC-------------------------------------------CEEECCcccchhhccCcccccCCCCC
Confidence 99999998776 4999999988754322 22334
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
++..|+|||.+.+..++.++|||||||++|++++ |..||...+. ......+. .+.
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~~~~~--~~~---------------- 238 (277)
T cd05032 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN------EEVLKFVI--DGG---------------- 238 (277)
T ss_pred ccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH------HHHHHHHh--cCC----------------
Confidence 5788999999988888999999999999999998 9999965441 11111111 010
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||+.+|.+|||+.++++.
T Consensus 239 -----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 239 -----------------------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred -----------------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 011223456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=268.36 Aligned_cols=241 Identities=22% Similarity=0.346 Sum_probs=194.4
Q ss_pred EEecccCceEEEEEEeCCC---CceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|..... +..|++|.+...... ...+.+|+..++.+ .|++++++++.+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i~~~~~~~~ 66 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL--------------GHPNVVRLLGVCT 66 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc--------------CCCChheeeeeec
Confidence 4689999999999999866 889999998765433 46778899999998 7899999988887
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSD-------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
.+..++++|||+ +++|.+.+.... ...+++..+..++.|++.||++||++ +++|+||+|+||+++.+
T Consensus 67 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~ 141 (262)
T cd00192 67 ----EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGED 141 (262)
T ss_pred ----CCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCC
Confidence 467799999999 889998887642 24589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~ 255 (393)
+ .++|+|||.+...... .....++..|+|||.
T Consensus 142 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 178 (262)
T cd00192 142 L-------------------------------------------VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES 178 (262)
T ss_pred C-------------------------------------------cEEEcccccccccccccccccccCCCcCccccCHHH
Confidence 6 4999999998866432 233456788999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+....++.++|+||||+++|+|++ |..||.... .......+.. +
T Consensus 179 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~--~--------------------------- 223 (262)
T cd00192 179 LKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------NEEVLEYLRK--G--------------------------- 223 (262)
T ss_pred hccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--C---------------------------
Confidence 998889999999999999999999 699997543 1111111111 0
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.+++.+||..||.+|||+.|++++
T Consensus 224 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 ------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0111234456789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=268.76 Aligned_cols=246 Identities=19% Similarity=0.289 Sum_probs=192.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|... .+..+++|.+.........+.+|+.+++.+ .|++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 68 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL--------------QHDKLVKLHA 68 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhc--------------CCCCcceEEE
Confidence 4578999999999999999999754 456699998876554456788899999998 7888888877
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. . ...+++|||+ ++++.+++.......++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 69 ~~~----~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~--- 139 (260)
T cd05073 69 VVT----K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASL--- 139 (260)
T ss_pred EEc----C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCC---
Confidence 765 2 4588999999 67998888765445578888999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||.+....... ....++..|+|||.+....
T Consensus 140 ----------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 179 (260)
T cd05073 140 ----------------------------------------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 179 (260)
T ss_pred ----------------------------------------cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCC
Confidence 49999999887553221 1223456799999998888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|++++ |..||...+. ......+ .+..+
T Consensus 180 ~~~~~Di~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~---~~~~~----------------------------- 221 (260)
T cd05073 180 FTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRAL---ERGYR----------------------------- 221 (260)
T ss_pred cCccccchHHHHHHHHHHhcCCCCCCCCCH------HHHHHHH---hCCCC-----------------------------
Confidence 8999999999999999998 9999975431 1111111 00000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+++.+||..+|++||++.++++
T Consensus 222 ---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 222 ---------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ---------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0111344567889999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=265.78 Aligned_cols=249 Identities=31% Similarity=0.474 Sum_probs=199.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+|++.++||+|++|.||++.+..+++.+++|.+.... .....+.+|+.+++.+ .|+|++++.+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV--------------NHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC--------------CCCCchhhhh
Confidence 5899999999999999999999999999999887532 2234556788888888 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+. .+...++||||+ +++|...+.... ...++...+..++.|++.||++||+. |++|+||+|+||+++.++
T Consensus 67 ~~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~- 140 (256)
T cd08530 67 AFL----DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVAND- 140 (256)
T ss_pred hhc----cCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCC-
Confidence 887 567899999999 778887775521 23478889999999999999999998 999999999999998765
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|++||.+.+..+
T Consensus 141 ------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~ 178 (256)
T cd08530 141 ------------------------------------------LVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPY 178 (256)
T ss_pred ------------------------------------------cEEEeeccchhhhccCCcccccCCccccCHHHHCCCCC
Confidence 4999999988765433 223457889999999998888
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|+||||+++|+|++|+.||...+.. .....+. .+..
T Consensus 179 ~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~--~~~~-------------------------------- 218 (256)
T cd08530 179 SYKSDIWSLGCLLYEMATFAPPFEARSMQ------DLRYKVQ--RGKY-------------------------------- 218 (256)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHh--cCCC--------------------------------
Confidence 99999999999999999999999654311 1111110 0110
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...+...+..+.+++.+||..+|.+|||+.++++||++
T Consensus 219 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 219 -------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 01223456778999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=270.71 Aligned_cols=246 Identities=16% Similarity=0.257 Sum_probs=192.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|++.+.||+|+||.||+|....+ ...||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 69 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF--------------DHPNIIR 69 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC--------------CCCCcce
Confidence 4799999999999999999988654 4579999876432 2234567899999988 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+...+++||++ +++|.+++.... ..++...+..++.|++.|+++||++ +++|+||||+||+++.++
T Consensus 70 ~~~~~~----~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~ 143 (266)
T cd05033 70 LEGVVT----KSRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNL 143 (266)
T ss_pred EeEEEe----cCCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCC
Confidence 988876 566789999999 678888776543 3588999999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEVL 256 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~~ 256 (393)
.++|+|||++....... ....++..|+|||.+
T Consensus 144 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~ 180 (266)
T cd05033 144 -------------------------------------------VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI 180 (266)
T ss_pred -------------------------------------------CEEECccchhhcccccccceeccCCCCCccccChhhh
Confidence 49999999988664211 112345789999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+..++.++|+||||+++|+|++ |..||..... ......+.. +.
T Consensus 181 ~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~--~~--------------------------- 225 (266)
T cd05033 181 AYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN------QDVIKAVED--GY--------------------------- 225 (266)
T ss_pred ccCCCccccchHHHHHHHHHHHccCCCCCCCCCH------HHHHHHHHc--CC---------------------------
Confidence 98889999999999999999998 9999864331 111111110 00
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.+++.+||..+|.+||++.+++++
T Consensus 226 ------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 226 ------------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 001123445678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=271.61 Aligned_cols=243 Identities=22% Similarity=0.360 Sum_probs=187.2
Q ss_pred EEEEEecccCceEEEEEEeC----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 31 HVIRKLGWGHFSTVWLSWDL----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.+.||.|+||.||+|... ..+..|+||.++.... ..+.+.+|+..++.+ .|+|+++++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~~ 67 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL--------------RHPNIVKLY 67 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH--------------SBTTBE-EE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc--------------ccccccccc
Confidence 46789999999999999888 3456799999965322 357788999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .....++||||+ +++|.+++.......++...+..++.|++.||+|||++ +++|++|+++||+++.++
T Consensus 68 g~~~----~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~-- 140 (259)
T PF07714_consen 68 GFCI----ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNG-- 140 (259)
T ss_dssp EEEE----SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTT--
T ss_pred cccc----ccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccc--
Confidence 9888 445599999999 68999998887445689999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++...... .........|+|||.+..
T Consensus 141 -----------------------------------------~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 179 (259)
T PF07714_consen 141 -----------------------------------------QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKD 179 (259)
T ss_dssp -----------------------------------------EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHH
T ss_pred -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 5999999998765211 223345678999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++||||||+++||+++ |+.||...+ .......+.+ +
T Consensus 180 ~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~------~~~~~~~~~~--~------------------------------ 221 (259)
T PF07714_consen 180 GEYTKKSDVYSFGMLLYEILTLGKFPFSDYD------NEEIIEKLKQ--G------------------------------ 221 (259)
T ss_dssp SEESHHHHHHHHHHHHHHHHTTSSGTTTTSC------HHHHHHHHHT--T------------------------------
T ss_pred ccccccccccccccccccccccccccccccc------cccccccccc--c------------------------------
Confidence 889999999999999999999 788886443 2222111110 0
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.....+...+..+.++|.+||..||.+|||++++++
T Consensus 222 ---------~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 222 ---------QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ---------EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ---------ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011123456678899999999999999999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=273.55 Aligned_cols=255 Identities=25% Similarity=0.370 Sum_probs=195.9
Q ss_pred eEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+|++.+.||+|++|.||+|... .+++.||+|.++... ...+.+.+|+.++..+. .|+++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~-------------~~~~i 67 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-------------RCPFL 67 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc-------------CCcch
Confidence 4889999999999999999864 457889999887432 22345678888888883 58889
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+.+. .+...++||||+ +++|...+... ..+++..++.++.|++.||.+||+. +++|+||+|+||+++.
T Consensus 68 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~ 140 (288)
T cd05583 68 VTLHYAFQ----TDTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDS 140 (288)
T ss_pred hhhheeee----cCCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECC
Confidence 99988876 567799999999 67888887654 3488999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEV 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~ 255 (393)
++ .++|+|||++....... ....++..|++||.
T Consensus 141 ~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 177 (288)
T cd05583 141 EG-------------------------------------------HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEV 177 (288)
T ss_pred CC-------------------------------------------CEEEEECccccccccccccccccccCCccccCHHH
Confidence 65 49999999887543221 12357889999999
Q ss_pred HhcCC--CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 256 LIGAG--YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 256 ~~~~~--~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+.+.. .+.++|+||||+++|+|++|..||........ .......+...
T Consensus 178 ~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~---------------------------- 227 (288)
T cd05583 178 IRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS--QSEISRRILKS---------------------------- 227 (288)
T ss_pred hcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch--HHHHHHHHHcc----------------------------
Confidence 87764 68899999999999999999999964332110 01111111110
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC---HHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~ell~hp~~~~~~ 390 (393)
....+...+..+.++|.+||+.||++||| +.++++||||+++.
T Consensus 228 --------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 228 --------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred --------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 01122334567889999999999999998 57789999998863
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=269.80 Aligned_cols=239 Identities=18% Similarity=0.300 Sum_probs=186.0
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 63 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY--------------SHPNIVRLIGVCT--- 63 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC--------------CCCCcceEEEEEc---
Confidence 3689999999999999999999999987643 22245678899999998 8999999998876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 64 -~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~--------- 131 (252)
T cd05084 64 -QKQPIYIVMELVQGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKN--------- 131 (252)
T ss_pred -CCCCeEEEEeeccCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCC---------
Confidence 556789999999 678887775432 4588999999999999999999998 999999999999997665
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHHHhcCCCCchh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++........ ....+..|+|||.+.+..++.++
T Consensus 132 ----------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 177 (252)
T cd05084 132 ----------------------------------VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSES 177 (252)
T ss_pred ----------------------------------cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHH
Confidence 499999999875432211 11224569999999888899999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
|+||||+++|+|++ |..||...+. ......+.. +
T Consensus 178 Dv~slG~il~e~~~~~~~p~~~~~~------~~~~~~~~~--~------------------------------------- 212 (252)
T cd05084 178 DVWSFGILLWEAFSLGAVPYANLSN------QQTREAIEQ--G------------------------------------- 212 (252)
T ss_pred HHHHHHHHHHHHHhCCCCCccccCH------HHHHHHHHc--C-------------------------------------
Confidence 99999999999998 8888854331 111111100 0
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.....+...+..+.+++.+||..||.+|||+.++++
T Consensus 213 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 213 --VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred --CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001122344668889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=274.47 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=192.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC-----ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK-----TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||++.+.... ..+|+|.+..... ....+.+|+.+++.+. .|+|
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~~ 77 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-------------KHKN 77 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-------------CCCC
Confidence 368999999999999999999876543 6799998875322 2245678888888872 5889
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--------------DYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--------------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
++++++.+. .+..++++|||+ +++|..++... ....++...+..++.|++.||+|||+. +
T Consensus 78 i~~~~~~~~----~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ 152 (293)
T cd05053 78 IINLLGVCT----QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-K 152 (293)
T ss_pred eeeEEEEEc----CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-C
Confidence 999988776 566799999998 77888887542 234578889999999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---- 240 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---- 240 (393)
++|+||||+||+++.++ .++|+|||++......
T Consensus 153 ivH~dlkp~Nil~~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~ 189 (293)
T cd05053 153 CIHRDLAARNVLVTEDH-------------------------------------------VMKIADFGLARDIHHIDYYR 189 (293)
T ss_pred ccccccceeeEEEcCCC-------------------------------------------eEEeCcccccccccccccee
Confidence 99999999999998766 5999999998765322
Q ss_pred -CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 -FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
.....++..|+|||++.+..++.++|||||||++|++++ |..||...+. ......+.. +.
T Consensus 190 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~---------- 251 (293)
T cd05053 190 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------EELFKLLKE--GY---------- 251 (293)
T ss_pred ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH------HHHHHHHHc--CC----------
Confidence 122234567999999988889999999999999999997 9999865431 111111100 00
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+|+.+||..||.+|||+.|++++
T Consensus 252 -----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 252 -----------------------------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred -----------------------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 001223445678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=272.61 Aligned_cols=247 Identities=21% Similarity=0.324 Sum_probs=191.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|.+.+.||+|+||.||+|.... ++..+++|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 70 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL--------------QHEHIV 70 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC--------------CCCCcc
Confidence 469999999999999999997543 455689998865432 235678899999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
++.+.+. .+...++||||+ +++|.+++.... ...+++..+..++.|++.|+++||++ |++
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~ 145 (291)
T cd05094 71 KFYGVCG----DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFV 145 (291)
T ss_pred eEEEEEc----cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-Cee
Confidence 9998876 566799999999 788888876432 12378889999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----C
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----F 241 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~ 241 (393)
||||||+||+++.++ .++|+|||++...... .
T Consensus 146 H~dlkp~Nil~~~~~-------------------------------------------~~~l~dfg~a~~~~~~~~~~~~ 182 (291)
T cd05094 146 HRDLATRNCLVGANL-------------------------------------------LVKIGDFGMSRDVYSTDYYRVG 182 (291)
T ss_pred ecccCcceEEEccCC-------------------------------------------cEEECCCCcccccCCCceeecC
Confidence 999999999998766 4999999998754321 1
Q ss_pred CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 242 ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 242 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
....++..|+|||.+.+..++.++||||||+++|+|++ |..||...+. ......+. .+..+
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~~~~~--~~~~~---------- 244 (291)
T cd05094 183 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------TEVIECIT--QGRVL---------- 244 (291)
T ss_pred CCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHh--CCCCC----------
Confidence 23345778999999998889999999999999999998 9999865441 11111110 00000
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+...+..+.+++.+||..||.+|||++++++.
T Consensus 245 -----------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 245 -----------------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred -----------------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 0112345678899999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=268.07 Aligned_cols=243 Identities=19% Similarity=0.269 Sum_probs=191.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||++. .+++.||+|.+.... ..+.+.+|+.+++.+ .|+|++++.+.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~--------------~~~~i~~~~~~~ 68 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKL--------------HHKNLVRLLGVI 68 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhC--------------CCCCcCeEEEEE
Confidence 479999999999999999985 467889999886542 346778899999988 789999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. . ...+++|||+ +++|.+.+.......++...+..++.|++.||++||+. |++||||||+||+++.++
T Consensus 69 ~----~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~----- 137 (254)
T cd05083 69 L----H-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDG----- 137 (254)
T ss_pred c----C-CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCC-----
Confidence 5 2 2368999999 68998888765544588999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||.+............+..|+|||.+.+..++.++|
T Consensus 138 --------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~D 179 (254)
T cd05083 138 --------------------------------------VAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSD 179 (254)
T ss_pred --------------------------------------cEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhh
Confidence 499999999875443333334467899999998888999999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
+||||+++|+|++ |+.||...+.. .....+.. +..
T Consensus 180 v~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~--~~~------------------------------------ 215 (254)
T cd05083 180 VWSYGVLLWEVFSYGRAPYPKMSLK------EVKECVEK--GYR------------------------------------ 215 (254)
T ss_pred HHHHHHHHHHHHhCCCCCCccCCHH------HHHHHHhC--CCC------------------------------------
Confidence 9999999999998 99999754411 11111100 000
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++++||..+|.+||+++++++.
T Consensus 216 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 216 ---MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00123445678899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=271.18 Aligned_cols=246 Identities=21% Similarity=0.304 Sum_probs=188.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.++||+|+||.||+|.+..++. .||+|+++... .....+.+|..+++.+ .|+|+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~--------------~~~~i 71 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV--------------GSPYV 71 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc--------------CCCCC
Confidence 4689999999999999999998877765 48999886432 2234567788888877 78899
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. . ...+++++++ ++++.+.+.... ..++...+..++.|++.||+|||++ +++||||||+||+++.
T Consensus 72 ~~~~~~~~----~-~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~ 144 (279)
T cd05109 72 CRLLGICL----T-STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKS 144 (279)
T ss_pred ceEEEEEc----C-CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcC
Confidence 88888775 2 3467899998 788888876532 3588999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVE 254 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE 254 (393)
++ .++|+|||+++....... ...++..|++||
T Consensus 145 ~~-------------------------------------------~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (279)
T cd05109 145 PN-------------------------------------------HVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 181 (279)
T ss_pred CC-------------------------------------------cEEECCCCceeecccccceeecCCCccchhhCCHH
Confidence 65 499999999876542211 123456799999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+..++.++|||||||++|+|++ |..||.... ...+..........
T Consensus 182 ~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~~~------------------------ 230 (279)
T cd05109 182 SILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-------AREIPDLLEKGERL------------------------ 230 (279)
T ss_pred HhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHHCCCcC------------------------
Confidence 9998889999999999999999998 899986433 11111111110000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.+...+..+.+++.+||..||++||++.++++.
T Consensus 231 ----------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 231 ----------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred ----------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112345678899999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=272.36 Aligned_cols=246 Identities=21% Similarity=0.303 Sum_probs=190.1
Q ss_pred CeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.++||+|+||.||+|... .++..+++|.+... ....+.+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 70 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL--------------QHQHIV 70 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC--------------CCCCCc
Confidence 57889999999999999999743 34667999987643 23346688899999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-------------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-------------~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
++.+.+. .+...+++|||+ +++|.+++..... ..+++..+..++.|++.|++|||+. |++|
T Consensus 71 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H 145 (280)
T cd05092 71 RFYGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVH 145 (280)
T ss_pred eEEEEEe----cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-Ceec
Confidence 9988776 556789999999 7788888765321 2478889999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FA 242 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~ 242 (393)
+||||+||+++.++ .++|+|||++...... ..
T Consensus 146 ~dlkp~nil~~~~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~ 182 (280)
T cd05092 146 RDLATRNCLVGQGL-------------------------------------------VVKIGDFGMSRDIYSTDYYRVGG 182 (280)
T ss_pred ccccHhhEEEcCCC-------------------------------------------CEEECCCCceeEcCCCceeecCC
Confidence 99999999997665 4999999988654321 11
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...+++.|+|||.+.+..++.++|||||||++|+|++ |.+||..... ...+..+.. +.
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~------------- 241 (280)
T cd05092 183 RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN------TEAIECITQ--GR------------- 241 (280)
T ss_pred CccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH------HHHHHHHHc--Cc-------------
Confidence 2234678999999998889999999999999999998 9999965441 111111110 00
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.++|.+||+.||.+||++.++++
T Consensus 242 --------------------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 242 --------------------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred --------------------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00112334567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=267.10 Aligned_cols=228 Identities=20% Similarity=0.259 Sum_probs=181.3
Q ss_pred cCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEE
Q psy12288 39 GHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHIC 118 (393)
Q Consensus 39 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 118 (393)
|.+|.||+|++..+++.+|+|.+.... ...+|...+... .|+|++++++.+. .....+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~--------------~~~~i~~~~~~~~----~~~~~~ 61 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPH--------------CVPNMVCLHKYIV----SEDSVF 61 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhc--------------CCCceeehhhhee----cCCeEE
Confidence 889999999999999999999987542 223343333333 6899999999887 567899
Q ss_pred EEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhccccc
Q psy12288 119 MVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197 (393)
Q Consensus 119 iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~ 197 (393)
++|||+ +++|.+.+.... .+++..+..++.|++.||.|||+. |++|+||||+||+++.++
T Consensus 62 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~---------------- 122 (237)
T cd05576 62 LVLQHAEGGKLWSHISKFL--NIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRG---------------- 122 (237)
T ss_pred EEEecCCCCCHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCC----------------
Confidence 999999 678888876643 488999999999999999999998 999999999999998766
Q ss_pred CCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHH
Q psy12288 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFEL 277 (393)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~el 277 (393)
.++++|||.+...........++..|+|||.+.+..++.++|+||+|+++|+|
T Consensus 123 ---------------------------~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el 175 (237)
T cd05576 123 ---------------------------HIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFEL 175 (237)
T ss_pred ---------------------------CEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHH
Confidence 48999999876655544455567889999999888889999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHH
Q psy12288 278 ATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEAS 357 (393)
Q Consensus 278 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
++|+.||...... ... .....++...+.
T Consensus 176 ~~g~~~~~~~~~~----------------------~~~------------------------------~~~~~~~~~~~~ 203 (237)
T cd05576 176 LTGKTLVECHPSG----------------------INT------------------------------HTTLNIPEWVSE 203 (237)
T ss_pred HHCcchhhcCchh----------------------ccc------------------------------ccccCCcccCCH
Confidence 9999877422100 000 000012234556
Q ss_pred HHHHHHHhccccCCCCCcCH-----HHHhcCCCC
Q psy12288 358 DFADFLLPMLHVNQKLRASA-----ADCLRHPWL 386 (393)
Q Consensus 358 ~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~ 386 (393)
.+.++|++||+.||.+||++ +++++||||
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 78899999999999999996 999999998
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=274.85 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=190.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-------CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-------KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.++|.+.+.||+|+||.||+|.+... ...+|+|.+.... .....+.+|+.+++.+. .|
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-------------~h 83 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-------------KH 83 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-------------CC
Confidence 46899999999999999999986542 3469999887532 22345677888888873 58
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--------------KGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
++++++++.+. .+...++||||+ +++|.+++..... ..++..+++.++.|++.||+|||++
T Consensus 84 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 159 (307)
T cd05098 84 KNIINLLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK 159 (307)
T ss_pred CCEeeEEEEEe----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 89999998886 556789999999 6789888865321 2377889999999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
|++|+||||+||+++.++ .++|+|||++......
T Consensus 160 -gi~H~dlkp~Nill~~~~-------------------------------------------~~kL~dfg~a~~~~~~~~ 195 (307)
T cd05098 160 -KCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARDIHHIDY 195 (307)
T ss_pred -CcccccccHHheEEcCCC-------------------------------------------cEEECCCcccccccccch
Confidence 999999999999998766 4999999998754321
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... .......+ .. +.
T Consensus 196 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------~~~~~~~~-~~-~~-------- 259 (307)
T cd05098 196 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLL-KE-GH-------- 259 (307)
T ss_pred hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHH-Hc-CC--------
Confidence 112233568999999998889999999999999999998 888885433 11111111 00 00
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.+++++
T Consensus 260 -------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 260 -------------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred -------------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 001223455788899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=272.26 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=191.2
Q ss_pred CCeE-EEEEEecccCceEEEEEE----eCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRY-HVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++| ++.+.||+|+||.||++. ...++..||+|.+..... ....+.+|+.+++.+ .|+|
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~ 67 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL--------------YHEN 67 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC--------------CCCC
Confidence 3456 999999999999998864 334677899999875422 345677899999998 8899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++.+.+.. ......+++|||+ +++|.+.+... .+++..+..++.|++.||.|||++ +++|+||||+||+++
T Consensus 68 i~~~~~~~~~--~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~ 141 (283)
T cd05080 68 IVKYKGCCSE--QGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLD 141 (283)
T ss_pred EeeEEEEEec--CCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEc
Confidence 9999887652 2345689999999 67887777653 389999999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCch
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRS 252 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~a 252 (393)
.++ .++|+|||++....... ....++..|+|
T Consensus 142 ~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (283)
T cd05080 142 NDR-------------------------------------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 178 (283)
T ss_pred CCC-------------------------------------------cEEEeecccccccCCcchhhccCCCCCCCceeeC
Confidence 765 49999999987653221 12234667999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCee
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
||.+.+..++.++||||||+++|+|++|..||....... ..... ..+..........
T Consensus 179 PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-------------- 236 (283)
T cd05080 179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF--------EEMIGPKQGQMTVVRLIEL-------------- 236 (283)
T ss_pred HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh--------hhhhcccccccchhhhhhh--------------
Confidence 999988888999999999999999999999985432110 00000 0000000000000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.......+.+...+..+.+++.+||..||++|||++++++
T Consensus 237 -----------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 237 -----------LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred -----------hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000011123445678999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=264.50 Aligned_cols=239 Identities=25% Similarity=0.429 Sum_probs=195.8
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
||+|+||.||++.+..+++.+++|.+..... ....+..|+.+++.+ .|++++++++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI--------------NHPFIVKLHYAFQ--- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc--------------CCCcHHHHHHHee---
Confidence 6999999999999998899999999875432 234678899999998 7899999998887
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.+...+++||++ +++|.+.+.... .+++..+..++.|++.|+.+||+. +++|+||+|+||+++.++
T Consensus 64 -~~~~~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~--------- 130 (250)
T cd05123 64 -TEEKLYLVLEYAPGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADG--------- 130 (250)
T ss_pred -cCCeeEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCC---------
Confidence 677899999999 889888886653 488999999999999999999997 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCchhhH
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGPAADI 267 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di 267 (393)
.++|+|||.+...... .....++..|++||...+...+.++|+
T Consensus 131 ----------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~ 176 (250)
T cd05123 131 ----------------------------------HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDW 176 (250)
T ss_pred ----------------------------------cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhH
Confidence 4999999988765432 334567889999999988888999999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||||+++|++++|..||..... ......+.. .
T Consensus 177 ~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~------------------------------------------~ 208 (250)
T cd05123 177 WSLGVLLYEMLTGKPPFYAEDR------KEIYEKILK------------------------------------------D 208 (250)
T ss_pred HHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhc------------------------------------------C
Confidence 9999999999999999964331 111111111 1
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcCH---HHHhcCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRASA---ADCLRHPWL 386 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~ell~hp~~ 386 (393)
...++...+..+.++|++||..||.+||++ +++++||||
T Consensus 209 ~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 209 PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 122334446788899999999999999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=269.63 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=189.0
Q ss_pred EEEEEEecccCceEEEEEEeCCC---CceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
|++.+.||+|+||.||.|....+ +..||+|.++.... ....+.+|+..++.+ .|+|++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~ 66 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF--------------DHPNVMKL 66 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC--------------CCCCeeeE
Confidence 57889999999999999987654 47899999875422 234677899999988 88999998
Q ss_pred cccceeecC--CCeEEEEEEeec-cccHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 104 LNDFKIYSR--NGTHICMVFEVM-GYNLLRLIARS----DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 104 ~~~~~~~~~--~~~~~~iv~e~~-~~~l~~~~~~~----~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++.+..... .....+++|||+ +++|...+... ....+++..+..++.|++.||+|||++ +++|+||||+||+
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil 145 (273)
T cd05035 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCM 145 (273)
T ss_pred EeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEE
Confidence 887653221 223589999999 67887776432 123478899999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~ 251 (393)
++.++ .++|+|||+++....... ....+..|+
T Consensus 146 ~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
T cd05035 146 LREDM-------------------------------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 182 (273)
T ss_pred ECCCC-------------------------------------------eEEECCccceeeccccccccccccccCCcccc
Confidence 97765 499999999876532211 122356799
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
|||.+.+..++.++|||||||++|+|++ |..||.+... ...+..+.. +.
T Consensus 183 ~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~---------------------- 232 (273)
T cd05035 183 AIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN------HEIYDYLRH--GN---------------------- 232 (273)
T ss_pred CHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc--CC----------------------
Confidence 9999988889999999999999999999 8899965441 111111110 00
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.|++++
T Consensus 233 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 -----------------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred -----------------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123456688999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=299.26 Aligned_cols=133 Identities=23% Similarity=0.391 Sum_probs=114.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|++..+++.||||+++.... ....+..|+.+++.+ .|++++++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~Iv~~ 69 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS--------------KSPFIVHL 69 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc--------------CCCCcCeE
Confidence 479999999999999999999999999999999875322 235567888888887 78999998
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+..+. ...++++||||+ +++|.+++... ..+++..++.++.||+.||.|||.. +|+||||||+|||++.++
T Consensus 70 ~~~~~----~~~~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g 141 (669)
T cd05610 70 YYSLQ----SANNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEG 141 (669)
T ss_pred EEEEE----ECCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCC
Confidence 87776 567899999999 78888887654 3478899999999999999999998 999999999999997664
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=270.37 Aligned_cols=248 Identities=19% Similarity=0.218 Sum_probs=186.9
Q ss_pred EEEEEecccCceEEEEEEeCCCCc--eEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDKT--FVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+.++||+|+||.||+|....++. .+|+|.++.. ....+.+.+|+.+++.+ .|+|++++++
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 67 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF--------------DHPNVMRLIG 67 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC--------------CCCCcceEEE
Confidence 467899999999999999877765 5899987643 22345677899999998 8899999887
Q ss_pred cceeecC--CCeEEEEEEeec-cccHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 106 DFKIYSR--NGTHICMVFEVM-GYNLLRLIARS----DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 106 ~~~~~~~--~~~~~~iv~e~~-~~~l~~~~~~~----~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
.+..... .....+++|||+ ++++.+.+... ....++...+..++.|++.||+|||++ +++||||||+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~ 146 (272)
T cd05075 68 VCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLN 146 (272)
T ss_pred EEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEc
Confidence 6542221 223578999999 67887776432 123478899999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSV 253 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aP 253 (393)
.++ .++|+|||++....... ....+++.|++|
T Consensus 147 ~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~p 183 (272)
T cd05075 147 ENM-------------------------------------------NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183 (272)
T ss_pred CCC-------------------------------------------CEEECCCCcccccCcccceecCCcccCCcccCCH
Confidence 665 49999999987653221 122356789999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|...+..++.++|+||||+++|+|++ |+.||..... ......+.. +..
T Consensus 184 e~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~~----------------------- 232 (272)
T cd05075 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN------SEIYDYLRQ--GNR----------------------- 232 (272)
T ss_pred HHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc--CCC-----------------------
Confidence 99998889999999999999999999 8899965331 111111100 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||+.||.+|||+.+++++
T Consensus 233 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 ----------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 01123345678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=274.62 Aligned_cols=254 Identities=19% Similarity=0.298 Sum_probs=189.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC--------------ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK--------------TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--------------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
.++|++.++||+|+||.||+|++..++ ..||+|.+.... .....+.+|+++++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l--------- 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL--------- 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC---------
Confidence 358999999999999999999875432 358999887532 2234578899999998
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC----------CCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD----------YKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
.|++++++++.+. .....++||||+ +++|.+++.... ...++...+..++.|++.||+||
T Consensus 75 -----~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 145 (295)
T cd05097 75 -----KNPNIIRLLGVCV----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL 145 (295)
T ss_pred -----CCCCcCeEEEEEc----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 7899999999886 566789999999 778888775432 12367788899999999999999
Q ss_pred hhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC
Q psy12288 160 HTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239 (393)
Q Consensus 160 H~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~ 239 (393)
|++ |++|+||||+||+++.++ .++|+|||++.....
T Consensus 146 H~~-~i~H~dlkp~Nill~~~~-------------------------------------------~~kl~dfg~~~~~~~ 181 (295)
T cd05097 146 ASL-NFVHRDLATRNCLVGNHY-------------------------------------------TIKIADFGMSRNLYS 181 (295)
T ss_pred Hhc-CeeccccChhhEEEcCCC-------------------------------------------cEEeccccccccccc
Confidence 998 999999999999998665 499999998875432
Q ss_pred CC-----CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 240 HF-----ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 240 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
.. ....++..|+|||.+.+..++.++|+||||+++|+|++ +..||...+. ...+..+.......
T Consensus 182 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~------~~~~~~~~~~~~~~--- 252 (295)
T cd05097 182 GDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD------EQVIENTGEFFRNQ--- 252 (295)
T ss_pred CcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh------HHHHHHHHHhhhhc---
Confidence 21 12234678999999998889999999999999999988 6677765441 12222111110000
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
. .......+...+..+.+|+++||..||.+||+++++++
T Consensus 253 ----~---------------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 253 ----G---------------------------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ----c---------------------------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0 00000011234568899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=266.97 Aligned_cols=237 Identities=19% Similarity=0.285 Sum_probs=183.8
Q ss_pred EecccCceEEEEEEe--CCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 35 KLGWGHFSTVWLSWD--LQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+||+|+||.||+|.. ..++..+|+|+++.... ..+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~- 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL--------------DNPYIVRMIGICE- 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC--------------CCCCcceEEEEEc-
Confidence 689999999999964 45678899998864322 235678889999988 8899999887653
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
+...++|||++ +++|.+++... ..+++..+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 67 ----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~------- 132 (257)
T cd05116 67 ----AESWMLVMELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQH------- 132 (257)
T ss_pred ----CCCcEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCC-------
Confidence 34578999999 57788877654 3488999999999999999999998 999999999999997665
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhHHHhcCCCC
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|+|||.+....++
T Consensus 133 ------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (257)
T cd05116 133 ------------------------------------YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS 176 (257)
T ss_pred ------------------------------------eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcC
Confidence 49999999987654321 122335789999999888889
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||.... .......+.. +.
T Consensus 177 ~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~i~~--~~--------------------------------- 215 (257)
T cd05116 177 SKSDVWSFGVLMWEAFSYGQKPYKGMK------GNEVTQMIES--GE--------------------------------- 215 (257)
T ss_pred chhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHC--CC---------------------------------
Confidence 99999999999999998 999997543 1122221111 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||+.||++||++++|.+.
T Consensus 216 ------~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 216 ------RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred ------CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 011223456788899999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=272.88 Aligned_cols=254 Identities=18% Similarity=0.300 Sum_probs=192.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC----------------ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK----------------TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
.+|++.++||+|+||.||+|.+..++ ..||+|.+.... ...+.+.+|+.+++.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-------- 76 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-------- 76 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc--------
Confidence 47999999999999999999877643 458999887543 2345677899999999
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD---------YKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
.|+|++++++.+. .+...+++||++ +++|..++.... ...++...+..++.|++.||+||
T Consensus 77 ------~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L 146 (296)
T cd05051 77 ------SDPNIARLLGVCT----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL 146 (296)
T ss_pred ------CCCCEeEEEEEEe----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7899999988876 557899999999 678888876543 12478899999999999999999
Q ss_pred hhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC
Q psy12288 160 HTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239 (393)
Q Consensus 160 H~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~ 239 (393)
|+. |++|+||||+||+++.++ .++|+|||++.....
T Consensus 147 H~~-~i~H~dlkp~Nili~~~~-------------------------------------------~~~l~dfg~~~~~~~ 182 (296)
T cd05051 147 ESL-NFVHRDLATRNCLVGKNY-------------------------------------------TIKIADFGMSRNLYS 182 (296)
T ss_pred HHc-CccccccchhceeecCCC-------------------------------------------ceEEccccceeeccc
Confidence 998 999999999999998775 499999999875432
Q ss_pred C-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 240 H-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 240 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
. .....++..|+|||.+.+..++.++||||||+++|+|++ +..||...+ ....+..........
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~------~~~~~~~~~~~~~~~--- 253 (296)
T cd05051 183 SDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT------DQQVIENAGHFFRDD--- 253 (296)
T ss_pred CcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC------hHHHHHHHHhccccc---
Confidence 2 122345678999999998889999999999999999998 677775433 122222221110000
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
. .....+.+..++..+.+++.+||..||.+|||+.|+++.
T Consensus 254 ---------------~----------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 254 ---------------G----------------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred ---------------c----------------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 0 000001123345688999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=265.48 Aligned_cols=245 Identities=21% Similarity=0.375 Sum_probs=190.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.+.||+|+||.||+|.+. .+..+|+|.+.........+.+|+.+++.+ .|++++++++.+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~ 68 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKL--------------SHPKLVQLYGVC 68 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhC--------------CCCCeeeEEEEE
Confidence 36899999999999999999775 466799998876555556788999999998 788999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....+++|||+ +++|.+.+.... ..++.+.+..++.|++.|+++||+. +++|+||+|+||+++.++
T Consensus 69 ~----~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~----- 137 (256)
T cd05112 69 T----ERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQ----- 137 (256)
T ss_pred c----cCCceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCC-----
Confidence 6 556789999999 677777765432 3478899999999999999999998 999999999999997665
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||.+....... ....++..|+|||.+.+..++
T Consensus 138 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~ 179 (256)
T cd05112 138 --------------------------------------VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYS 179 (256)
T ss_pred --------------------------------------eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcC
Confidence 49999999887543221 122345689999999988899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|+||||+++|+|++ |..||.... ....+..+.. + .+.
T Consensus 180 ~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~--~-------------~~~------------------ 220 (256)
T cd05112 180 SKSDVWSFGVLMWEVFSEGKTPYENRS------NSEVVETINA--G-------------FRL------------------ 220 (256)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHhC--C-------------CCC------------------
Confidence 99999999999999998 999996433 1111111100 0 000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+...+..+.+|+++||..+|.+|||+.++++.
T Consensus 221 --------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 221 --------YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred --------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0112235678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=265.82 Aligned_cols=244 Identities=20% Similarity=0.311 Sum_probs=192.8
Q ss_pred EEEEEEecccCceEEEEEEeCCCC----ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDK----TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+++.+.||.|+||.||+|.+..++ ..||+|.+..... ....+.+|+.+++.+ .|++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~ 66 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL--------------DHPNIVKL 66 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc--------------CCCchheE
Confidence 356789999999999999998766 8899999875543 356788899999998 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .....+++||++ ++++.+.+.......+++..+..++.|++.||++||+. +++|+||+|+||+++.++
T Consensus 67 ~~~~~----~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~- 140 (258)
T smart00219 67 LGVCT----EEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENL- 140 (258)
T ss_pred EEEEc----CCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCC-
Confidence 98887 456799999999 77888887664433389999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||.+........ ...++..|+|||.+.+
T Consensus 141 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~ 178 (258)
T smart00219 141 ------------------------------------------VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD 178 (258)
T ss_pred ------------------------------------------eEEEcccCCceecccccccccccCCCcccccChHHhcc
Confidence 499999999876543211 1235788999999988
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++|+||||+++++|++ |..||...+ .......+.. +.
T Consensus 179 ~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~~~--~~----------------------------- 221 (258)
T smart00219 179 GKFTSKSDVWSFGVLLWEIFTLGESPYPGMS------NEEVLEYLKK--GY----------------------------- 221 (258)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhc--CC-----------------------------
Confidence 888999999999999999998 888886533 1111111110 00
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..||++|||+.|+++
T Consensus 222 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 222 ----------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ----------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 00112335678889999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG4721|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=283.81 Aligned_cols=233 Identities=24% Similarity=0.322 Sum_probs=192.7
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++-||.|+.|.||+|+. .++.||||.++. .-..++.-|+.| .|+||+.+.+++.
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~e------lkETdIKHLRkL--------------kH~NII~FkGVCt---- 182 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRE------LKETDIKHLRKL--------------KHPNIITFKGVCT---- 182 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhh------hhhhhHHHHHhc--------------cCcceeeEeeeec----
Confidence 45689999999999965 478899997652 123467778888 8999999999997
Q ss_pred CCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhh
Q psy12288 113 NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDA 191 (393)
Q Consensus 113 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~ 191 (393)
....+||||||| .|-|...+... ..+.......+..+|+.|+.|||.+ .|+|||||.-|||+..+.
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d---------- 249 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDD---------- 249 (904)
T ss_pred CCceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccc----------
Confidence 667799999999 88899888776 3488899999999999999999998 999999999999998887
Q ss_pred hcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCCchhhHHh
Q psy12288 192 TKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAADIWS 269 (393)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwS 269 (393)
.+|++|||.++..... .-..+||..|||||++.+.+++.++||||
T Consensus 250 ---------------------------------~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwS 296 (904)
T KOG4721|consen 250 ---------------------------------VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWS 296 (904)
T ss_pred ---------------------------------eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceeh
Confidence 4999999998766433 23468999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhc
Q psy12288 270 TACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY 349 (393)
Q Consensus 270 lG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (393)
|||++|||+||..||.+.+...+ +--.|. ..-.+
T Consensus 297 fGVVLWEmLT~EiPYkdVdssAI----------IwGVGs------------------------------------NsL~L 330 (904)
T KOG4721|consen 297 FGVVLWEMLTGEIPYKDVDSSAI----------IWGVGS------------------------------------NSLHL 330 (904)
T ss_pred hHHHHHHHHhcCCCccccchhee----------EEeccC------------------------------------Ccccc
Confidence 99999999999999975542211 110110 00123
Q ss_pred cCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 350 HWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 350 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.+..++..|.=||++||.-.|..||+++|++.|
T Consensus 331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 4567888999999999999999999999999998
|
|
| >KOG4645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=311.77 Aligned_cols=255 Identities=28% Similarity=0.409 Sum_probs=207.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..+++-.-+||.|.||.||.|.+..+|+..|+|-++-. ....+...+|..++..+ .|||+++.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l--------------nHpNlV~Y 1299 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL--------------NHPNLVRY 1299 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc--------------cCcccccc
Confidence 35788889999999999999999999999999976533 23345678899999999 99999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++=. .....+|.|||| +|+|.+++..+.. ..+...+.+-.|++.|++|||++ |||||||||+||+++.++
T Consensus 1300 yGVEv----HRekv~IFMEyC~~GsLa~ll~~gri--~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g- 1371 (1509)
T KOG4645|consen 1300 YGVEV----HREKVYIFMEYCEGGSLASLLEHGRI--EDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNG- 1371 (1509)
T ss_pred Cceee----cHHHHHHHHHHhccCcHHHHHHhcch--hhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCC-
Confidence 88766 566788999999 8899988877532 55666778899999999999998 999999999999999887
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEV 255 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~ 255 (393)
.+|++|||.|.....+ .....||+.|||||+
T Consensus 1372 ------------------------------------------~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEv 1409 (1509)
T KOG4645|consen 1372 ------------------------------------------LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEV 1409 (1509)
T ss_pred ------------------------------------------cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchh
Confidence 4999999999876443 234589999999999
Q ss_pred HhcC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 256 LIGA---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 256 ~~~~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
+.+. +...+.|||||||++.||+||+.||...+ .-..|+-..|.-
T Consensus 1410 it~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d---------ne~aIMy~V~~g----------------------- 1457 (1509)
T KOG4645|consen 1410 ITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD---------NEWAIMYHVAAG----------------------- 1457 (1509)
T ss_pred hcccccCCCCcchhhhcccceEEEeecCCCchhhcc---------chhHHHhHHhcc-----------------------
Confidence 9874 46889999999999999999999996433 223333322211
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.+..+|...+.+..+||.+||..||.+|+++.|+++|-|-+.+.+
T Consensus 1458 --------------h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1458 --------------HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred --------------CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 111144557888899999999999999999999999999877654
|
|
| >KOG0584|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=285.79 Aligned_cols=254 Identities=27% Similarity=0.415 Sum_probs=205.8
Q ss_pred CCeEE-EEEEecccCceEEEEEEeCCCCceEE---EEE--EecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYH-VIRKLGWGHFSTVWLSWDLQDKTFVA---LKI--VKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~-~~~~lg~G~~g~V~~~~~~~~~~~va---iK~--~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+|- ...+||+|+|-.||+|.+..+|..|| +|+ +..++...+++..|+.+|+.| .|+||
T Consensus 38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL--------------~H~NI 103 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL--------------KHPNI 103 (632)
T ss_pred CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC--------------CCCce
Confidence 34554 34689999999999999999998887 332 223444568999999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-CeeeccCCCCceEEe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC-RIIHTDIKPENILMC 178 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~-~i~H~dlkp~NIl~~ 178 (393)
+++++++... .+..+.+|+|.+ .|+|..+..+.. .++...++.+++||++||.|||.+. .|+|||||=+||+++
T Consensus 104 irfy~SW~d~--~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin 179 (632)
T KOG0584|consen 104 IRFYDSWVDT--DNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN 179 (632)
T ss_pred eeeeeheecC--CCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc
Confidence 9999999843 446788999999 899999988764 4889999999999999999999874 399999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCC-CCCCCCCchhHHHh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD-EIQTRQYRSVEVLI 257 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~t~~y~aPE~~~ 257 (393)
.+- +.+|++|+|+|.....+... -+|||.|||||+..
T Consensus 180 G~~------------------------------------------G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE 217 (632)
T KOG0584|consen 180 GNL------------------------------------------GEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE 217 (632)
T ss_pred CCc------------------------------------------CceeecchhHHHHhhccccceeccCccccChHHHh
Confidence 653 35999999999887766554 48999999999998
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
..|...+||||||+.++||+|+.+||..+.. -+.|++ +.+-+.+.-+
T Consensus 218 -E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n---------~AQIYKKV~SGiKP~sl---------------------- 265 (632)
T KOG0584|consen 218 -ENYNELVDVYAFGMCMLEMVTSEYPYSECTN---------PAQIYKKVTSGIKPAAL---------------------- 265 (632)
T ss_pred -hhcchhhhhhhhhHHHHHHHhccCChhhhCC---------HHHHHHHHHcCCCHHHh----------------------
Confidence 4499999999999999999999999976552 233433 2222222221
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..-..+++.+||.+||.. .++|||+.|||.||||..
T Consensus 266 ---------------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 266 ---------------SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred ---------------hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 122356788999999999 999999999999999976
|
|
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=273.15 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=189.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC-------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.++|++.++||+|+||.||+|.+.. ....+|+|.++... .....+.+|+.+++.+. .|
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h 77 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-------------KH 77 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-------------CC
Confidence 3689999999999999999997643 24569999877432 22345678988888872 58
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
+|++++++.+. .....+++|||+ +++|.+++.... ...++..++..++.|++.||.|||++
T Consensus 78 ~~iv~~~~~~~----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 153 (314)
T cd05099 78 KNIINLLGVCT----QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR 153 (314)
T ss_pred CCeeeEEEEEc----cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence 99999998876 456789999999 788888886532 13478888999999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
|++|+||||+||+++.++ .++|+|||+++.....
T Consensus 154 -gi~H~dlkp~Nill~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~ 189 (314)
T cd05099 154 -RCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARGVHDIDY 189 (314)
T ss_pred -CeeeccccceeEEEcCCC-------------------------------------------cEEEcccccccccccccc
Confidence 999999999999997766 4999999998755321
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... ......+.. +.
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~-------- 253 (314)
T cd05099 190 YKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV------EELFKLLRE--GH-------- 253 (314)
T ss_pred ccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc--CC--------
Confidence 112233467999999998889999999999999999999 8899865431 111111110 00
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..||.+|||+.++++
T Consensus 254 -------------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 254 -------------------------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred -------------------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00112344567889999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=273.38 Aligned_cols=247 Identities=17% Similarity=0.259 Sum_probs=190.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.+|++.++||+|+||.||+|....+ +..||+|.+..... ....+.+|+.++..+ .|+|+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~i 70 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL--------------QHPNI 70 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC--------------CCCCc
Confidence 3588889999999999999987643 56799999875432 234567788888887 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
+++++.+. .....++++||+ ++++..++.... ...++...+..++.|++.||+|||++ |+
T Consensus 71 v~~~~~~~----~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi 145 (283)
T cd05091 71 VCLLGVVT----KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HV 145 (283)
T ss_pred CeEEEEEc----CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence 99998876 556689999998 677777764221 12377888899999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+||||||+||+++.++ .++|+|||+++.....
T Consensus 146 ~H~dlkp~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~ 182 (283)
T cd05091 146 VHKDLATRNVLVFDKL-------------------------------------------NVKISDLGLFREVYAADYYKL 182 (283)
T ss_pred cccccchhheEecCCC-------------------------------------------ceEecccccccccccchheee
Confidence 9999999999997665 4999999988754322
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+.. ....+..+... .
T Consensus 183 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~i~~~--~----------- 243 (283)
T cd05091 183 MGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDVIEMIRNR--Q----------- 243 (283)
T ss_pred ccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcC--C-----------
Confidence 123345678999999988889999999999999999998 888886543 22222222110 0
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||+.+|.+||++++++..
T Consensus 244 ----------------------------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 244 ----------------------------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred ----------------------------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 001224566778899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=277.90 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=188.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|.+. .+++.||||+++.+.. ....+.+|+.+++.+. .|+|
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~n 72 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-------------HHLN 72 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc-------------CCcc
Confidence 468999999999999999999843 4577899999875322 2345678999999883 5789
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
++++++.+.. .+...+++|||+ +++|.+++....
T Consensus 73 iv~~~~~~~~---~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (343)
T cd05103 73 VVNLLGACTK---PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSAS 149 (343)
T ss_pred Hhhhcceeec---CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccccccc
Confidence 9999887752 345688999999 788888775421
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhc
Q psy12288 137 -----------------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193 (393)
Q Consensus 137 -----------------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~ 193 (393)
...++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~------------ 216 (343)
T cd05103 150 SGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENN------------ 216 (343)
T ss_pred ccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCC------------
Confidence 01256777889999999999999998 999999999999998665
Q ss_pred ccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++...... .....++..|+|||.+.+..++.++|+|
T Consensus 217 -------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 265 (343)
T cd05103 217 -------------------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 265 (343)
T ss_pred -------------------------------cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHH
Confidence 4999999998754221 1122345679999999988899999999
Q ss_pred hHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 269 STACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 269 SlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
|||+++|+|++ |..||...... ..+..... .+..
T Consensus 266 slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~-~~~~-------------------------------------- 300 (343)
T cd05103 266 SFGVLLWEIFSLGASPYPGVKID------EEFCRRLK-EGTR-------------------------------------- 300 (343)
T ss_pred HHHHHHHHHHHCCCCCCCCcccc------HHHHHHHh-ccCC--------------------------------------
Confidence 99999999997 99998653311 11111100 0000
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||.+|||+.++++|
T Consensus 301 -~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 301 -MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00112234578899999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=272.87 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=189.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC----------------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCC
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ----------------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
.++|++.++||+|+||.||+|.+.. ++..+|+|++.... .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l------- 76 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL------- 76 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-------
Confidence 4579999999999999999986543 24468999887532 2235678899999998
Q ss_pred cccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHH
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY---------KGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---------~~l~~~~~~~i~~ql~~~l~~ 158 (393)
.|++++++++.+. .+...+++|||+ +++|.+++..... ..++...+..++.|++.||++
T Consensus 77 -------~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~ 145 (296)
T cd05095 77 -------KDPNIIRLLAVCI----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKY 145 (296)
T ss_pred -------CCCCcceEEEEEe----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 7899999998876 556789999999 7788888765321 235677899999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||+. |++|+||||+||+++.++ .++|+|||++....
T Consensus 146 lH~~-~i~H~dlkp~Nili~~~~-------------------------------------------~~~l~dfg~~~~~~ 181 (296)
T cd05095 146 LSSL-NFVHRDLATRNCLVGKNY-------------------------------------------TIKIADFGMSRNLY 181 (296)
T ss_pred HHHC-CeecccCChheEEEcCCC-------------------------------------------CEEeccCccccccc
Confidence 9998 999999999999997665 49999999987543
Q ss_pred CCC-----CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 239 DHF-----ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT--GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 239 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
... ....++..|++||...+..++.++|+|||||++|+|++ |..||...+..+ ........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~------~~~~~~~~------ 249 (296)
T cd05095 182 SGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ------VIENTGEF------ 249 (296)
T ss_pred CCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH------HHHHHHHH------
Confidence 221 11233578999999988889999999999999999998 778886544211 11110000
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+...+. ....+.+..++..+.+|+.+||..||.+||++.++++
T Consensus 250 ------------~~~~~~----------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 250 ------------FRDQGR----------------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ------------Hhhccc----------------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000000 0000112334578889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=267.49 Aligned_cols=246 Identities=16% Similarity=0.228 Sum_probs=190.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|+..+.||+|++|.||+|....++. .+++|.+.... ...+.+..|+.+++.+ .|+|+++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 70 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF--------------SHHNIIR 70 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC--------------CCCCeeE
Confidence 579999999999999999999876654 68999876432 2245677888888888 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .....++|||++ +++|..++.... ..++...+..++.|++.|+++||+. |++|+||||+||+++.++
T Consensus 71 ~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~ 144 (268)
T cd05063 71 LEGVVT----KFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNL 144 (268)
T ss_pred EEEEEc----cCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCC
Confidence 988876 556789999999 667777765433 4588999999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC------CCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------~~~~t~~y~aPE~ 255 (393)
.++++|||++........ ....+..|+|||.
T Consensus 145 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 181 (268)
T cd05063 145 -------------------------------------------ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA 181 (268)
T ss_pred -------------------------------------------cEEECCCccceecccccccceeccCCCcCceecCHHH
Confidence 499999998875532211 1122456999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|+||||+++|++++ |..||...+ .......+.. ....
T Consensus 182 ~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~------~~~~~~~i~~-~~~~------------------------- 229 (268)
T cd05063 182 IAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS------NHEVMKAIND-GFRL------------------------- 229 (268)
T ss_pred hhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhc-CCCC-------------------------
Confidence 998888999999999999999997 999996543 1122222211 0110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.+...+..+.+++.+||..+|.+||++.++++.
T Consensus 230 ---------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 230 ---------------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1112345678899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG1167|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=274.90 Aligned_cols=328 Identities=23% Similarity=0.310 Sum_probs=215.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCC---CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+...|.++++||+|+|+.||+|.+.. .++.||+|.+... ....++.+|+++|..++ ++.||++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~g-------------G~~ni~~ 99 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLG-------------GSDNIIK 99 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhc-------------cchhhhc
Confidence 34589999999999999999999887 6889999987654 35678999999999996 7788899
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+++. +++++++|+||++..-+..+... ++..+++.+++.++.||+++|.+ ||+||||||.|++.+..-.
T Consensus 100 ~~~~~r----nnd~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~ 170 (418)
T KOG1167|consen 100 LNGCFR----NNDQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQ 170 (418)
T ss_pred chhhhc----cCCeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccC
Confidence 999987 88999999999976656555543 77899999999999999999998 9999999999998863322
Q ss_pred --------HHhHhhhhhhcccccCCcCCCCCC-CCCCCCCCCCCCcccccceEEEee-cCccc--cc--cCCCCCCCCCC
Q psy12288 183 --------KVRRMARDATKHHKIGMKLPMSLD-STMSDFSLLDPANEVYDISVKIAD-LGNAC--WI--DDHFADEIQTR 248 (393)
Q Consensus 183 --------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~kl~d-fg~~~--~~--~~~~~~~~~t~ 248 (393)
.++............+.+.+.... .+..-.+... +.... -|..+ .. ........||+
T Consensus 171 rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~---------~~~~~p~g~~~~~~~~r~~~~anrAGT~ 241 (418)
T KOG1167|consen 171 RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSV---------ATASKPAGYYRRCNDGRPSERANRAGTP 241 (418)
T ss_pred CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccc---------ccccCCCCceeccCCCccceecccCCCC
Confidence 222111111111111111111000 0000000000 00000 00001 00 12244668999
Q ss_pred CCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
+|+|||++...+ .++++||||.||+++.++++.+||-.... +.+.+.++..+.|.......-..-...-.+..+
T Consensus 242 GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~d-----d~~al~ei~tifG~~~mrk~A~l~g~~~l~~ks 316 (418)
T KOG1167|consen 242 GFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKD-----DADALAEIATIFGSAEMRKCAALPGRILLWQKS 316 (418)
T ss_pred CCCchHHHhhccCcCCccceeeccceeehhhccccccccCcc-----ccchHHHHHHHhChHHHHHHhhcCCceeeeccc
Confidence 999999999876 69999999999999999999999964432 667788888888864432211111110011111
Q ss_pred CCeeeccC---CCcch-hHHHHh------hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 328 GNFRRIDN---LKPWG-LYQVLT------EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 328 ~~~~~~~~---~~~~~-~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
. ...+.. ....- ...+.+ ....+.+..+..+++|+.+||..||.+|+||+++|.||||....+
T Consensus 317 n-~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 317 N-IPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR 389 (418)
T ss_pred c-ccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence 0 000000 00000 000011 112233445668999999999999999999999999999997654
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=265.65 Aligned_cols=238 Identities=18% Similarity=0.299 Sum_probs=185.1
Q ss_pred EEecccCceEEEEEEeCCCC---ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQDK---TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++||+|+||.||+|....++ ..+|+|.+..... ..+.+.+|+.+++.+ .|++++++++.+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~ 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------------DHPCIVRLIGVCK 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc--------------CCCCeeeEEEEEc
Confidence 47999999999999876655 6899998875543 345678899999988 7899999988653
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
+...+++||++ +++|.+.+.... .+++..+..++.|++.||++||++ +++|+||||+||+++.++
T Consensus 67 -----~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~------ 132 (257)
T cd05060 67 -----GEPLMLVMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRH------ 132 (257)
T ss_pred -----CCceEEEEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCC------
Confidence 34579999998 678888886653 588999999999999999999998 999999999999998766
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC------CCCCCCCCchhHHHhcCCC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||.+........ ...++..|+|||.+.+..+
T Consensus 133 -------------------------------------~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 175 (257)
T cd05060 133 -------------------------------------QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKF 175 (257)
T ss_pred -------------------------------------cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCC
Confidence 499999999876532211 1123467999999988889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||...+. ......+... .
T Consensus 176 ~~~~Di~slG~~l~~~~~~g~~p~~~~~~------~~~~~~~~~~-~--------------------------------- 215 (257)
T cd05060 176 SSKSDVWSYGVTLWEAFSYGAKPYGEMKG------AEVIAMLESG-E--------------------------------- 215 (257)
T ss_pred CccchHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHcC-C---------------------------------
Confidence 999999999999999998 9999965431 1111111100 0
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+||++.++++.
T Consensus 216 -------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 216 -------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred -------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 001123445678899999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=270.69 Aligned_cols=246 Identities=20% Similarity=0.303 Sum_probs=188.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+|++.+.||+|+||.||+|.+... ...+++|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv 66 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV--------------NHPHVI 66 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC--------------CCCCEe
Confidence 478899999999999999987542 35688998764322 235678899999998 799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHH
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD----------------------YKGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------------~~~l~~~~~~~i~~ql~~~l~~ 158 (393)
++++.+. ..+..++++||+ +++|.+++.... ...++...+..++.|++.||+|
T Consensus 67 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 142 (290)
T cd05045 67 KLYGACS----QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQY 142 (290)
T ss_pred eEEEEEe----cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHH
Confidence 9998876 556689999999 678887765421 1247788899999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||+. +++||||||+||+++.++ .++|+|||+++...
T Consensus 143 LH~~-~ivH~dikp~nill~~~~-------------------------------------------~~kl~dfg~~~~~~ 178 (290)
T cd05045 143 LAEM-KLVHRDLAARNVLVAEGR-------------------------------------------KMKISDFGLSRDVY 178 (290)
T ss_pred HHHC-CeehhhhhhheEEEcCCC-------------------------------------------cEEecccccccccc
Confidence 9998 999999999999997765 49999999987542
Q ss_pred CC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 239 DH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 239 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
.. .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.... . +.....
T Consensus 179 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~-~~~~~~-------- 243 (290)
T cd05045 179 EEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE------R-LFNLLK-------- 243 (290)
T ss_pred CccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHh--------
Confidence 21 112234678999999988889999999999999999998 99999654311 1 111100
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.. ....+...+..+.+++.+||+.||.+||++.++++.
T Consensus 244 ------~~~--------------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 244 ------TGY--------------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred ------CCC--------------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 000 000123445678899999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=280.49 Aligned_cols=250 Identities=19% Similarity=0.279 Sum_probs=191.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|.+.++||+|+||.||+|.+. .+++.||+|+++.... ..+.+.+|+.+++.+. .|+|
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-------------~H~n 102 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-------------PHLN 102 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-------------CCCC
Confidence 467899999999999999999864 3456899999875422 2345778999999982 3899
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------------------------------------
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------------------------------------ 136 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------ 136 (393)
++++++.+. .....++||||+ +|+|.+++....
T Consensus 103 iv~~~~~~~----~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (401)
T cd05107 103 IVNLLGACT----KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGY 178 (401)
T ss_pred eEEEEEEEc----cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccc
Confidence 999998886 456799999999 789988875421
Q ss_pred ------------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 137 ------------------------------------------------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 137 ------------------------------------------------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
...++...+..++.|++.||+|||+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 258 (401)
T cd05107 179 MDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK 258 (401)
T ss_pred cccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 11356677888999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
+++||||||+||+++.++ .++|+|||++......
T Consensus 259 -~ivHrdlkp~NiLl~~~~-------------------------------------------~~kL~DfGla~~~~~~~~ 294 (401)
T cd05107 259 -NCVHRDLAARNVLICEGK-------------------------------------------LVKICDFGLARDIMRDSN 294 (401)
T ss_pred -CcCcccCCcceEEEeCCC-------------------------------------------EEEEEecCcceecccccc
Confidence 999999999999997665 5999999998754321
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... .+.+..... .+..
T Consensus 295 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~------~~~~~~~~~-~~~~------- 360 (401)
T cd05107 295 YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM------NEQFYNAIK-RGYR------- 360 (401)
T ss_pred cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc------hHHHHHHHH-cCCC-------
Confidence 122346788999999998889999999999999999998 8899864431 111111111 0100
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|.+||++++|++.
T Consensus 361 --------------------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 361 --------------------------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred --------------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 01123345688899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=268.37 Aligned_cols=245 Identities=18% Similarity=0.302 Sum_probs=184.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCce----EEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTF----VALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|++.+.||+|+||.||+|.+..+++. +++|.+..... ....+..|+..++.+ .|+|++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l--------------~h~~iv 72 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL--------------DHAYIV 72 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC--------------CCCCcc
Confidence 4789999999999999999998877763 67776643211 123445566666666 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. +...++++|++ +++|.+.+.... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.+
T Consensus 73 ~~~~~~~-----~~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~ 145 (279)
T cd05111 73 RLLGICP-----GASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSD 145 (279)
T ss_pred eEEEEEC-----CCccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCC
Confidence 9988653 33467889998 789988886543 4588999999999999999999998 99999999999999776
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~ 255 (393)
+ .++|+|||.++..... .....++..|++||.
T Consensus 146 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~ 182 (279)
T cd05111 146 S-------------------------------------------IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALES 182 (279)
T ss_pred C-------------------------------------------cEEEcCCccceeccCCCcccccCCCCCcccccCHHH
Confidence 5 4999999998754321 112345678999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|++++ |..||.+.... .+..+.. .+..+
T Consensus 183 ~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~-~~~~~------------------------ 230 (279)
T cd05111 183 ILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------EVPDLLE-KGERL------------------------ 230 (279)
T ss_pred hccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHH-CCCcC------------------------
Confidence 998889999999999999999998 99999654311 1111111 01100
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+...+..+.+++.+||..||++|||+.|+++.
T Consensus 231 ---------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 231 ---------------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0112234567899999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=271.36 Aligned_cols=251 Identities=20% Similarity=0.302 Sum_probs=191.9
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCC-------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
+-.++|++.+.||+|+||.||+|+... ++..||+|.+.... .....+.+|+.+++.+.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~------------- 78 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG------------- 78 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-------------
Confidence 445799999999999999999997532 34579999886432 22356788999998873
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhh
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLH 160 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH 160 (393)
.|+|++++++.+. .....+++|||+ +++|.+++.... ...++...+..++.|++.||+|||
T Consensus 79 ~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 154 (304)
T cd05101 79 KHKNIINLLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA 154 (304)
T ss_pred cCCCchheeEEEe----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 6889999998886 556789999999 678888876532 123677888999999999999999
Q ss_pred hcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC
Q psy12288 161 TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH 240 (393)
Q Consensus 161 ~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~ 240 (393)
++ |++|+||||+||+++.++ .++|+|||.+......
T Consensus 155 ~~-givH~dlkp~Nili~~~~-------------------------------------------~~kl~D~g~~~~~~~~ 190 (304)
T cd05101 155 SQ-KCIHRDLAARNVLVTENN-------------------------------------------VMKIADFGLARDVNNI 190 (304)
T ss_pred HC-CeeecccccceEEEcCCC-------------------------------------------cEEECCCccceecccc
Confidence 98 999999999999997665 4999999998765321
Q ss_pred -----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHH
Q psy12288 241 -----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314 (393)
Q Consensus 241 -----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 314 (393)
.....++..|+|||++.+..++.++||||||+++|+|++ |..||...+. ......+.. +.
T Consensus 191 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~------ 256 (304)
T cd05101 191 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EELFKLLKE--GH------ 256 (304)
T ss_pred cccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHc--CC------
Confidence 122334678999999998889999999999999999998 7888865431 111111100 00
Q ss_pred hcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.|+++.
T Consensus 257 ---------------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 257 ---------------------------------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred ---------------------------------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 000123455788899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=266.65 Aligned_cols=245 Identities=16% Similarity=0.264 Sum_probs=189.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+|++.+.||+|+||.||+|....+++ .||+|.+... ......+..|+.+++.+ .|+|++++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni~~~ 70 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF--------------DHPNIIHL 70 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC--------------CCcCcceE
Confidence 58999999999999999999887764 5999988753 22345678899999988 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+.+. .+...++||||+ +++|.+++.... ..++...++.++.|++.||++||++ |++|+||||+||+++.++
T Consensus 71 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~- 143 (269)
T cd05065 71 EGVVT----KSRPVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNL- 143 (269)
T ss_pred EEEEC----CCCceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCC-
Confidence 88876 566789999999 567777765433 4588999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----C-C--CCCCCCchhH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----D-E--IQTRQYRSVE 254 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~-~--~~t~~y~aPE 254 (393)
.++|+|||++........ . . ..+..|+|||
T Consensus 144 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (269)
T cd05065 144 ------------------------------------------VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPE 181 (269)
T ss_pred ------------------------------------------cEEECCCccccccccCccccccccccCCCcceeecCHh
Confidence 499999998765432111 0 1 1134699999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+..++.++|||||||++|++++ |..||...+. ......+... ..
T Consensus 182 ~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~------~~~~~~i~~~-~~------------------------- 229 (269)
T cd05065 182 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN------QDVINAIEQD-YR------------------------- 229 (269)
T ss_pred HhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH------HHHHHHHHcC-Cc-------------------------
Confidence 9998889999999999999999886 9999965441 1111111100 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.+.+.+.+..+.+++.+||..+|.+||++++++..
T Consensus 230 ---------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 230 ---------------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred ---------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01113345678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=266.38 Aligned_cols=244 Identities=16% Similarity=0.190 Sum_probs=177.9
Q ss_pred EEecccCceEEEEEEeCCC------------CceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 34 RKLGWGHFSTVWLSWDLQD------------KTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~------------~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+.||+|+||.||+|..... ...|++|.+.... .....+.+|+.+++.+ .|+|+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l--------------~hp~i 66 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV--------------SHKHI 66 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC--------------CCCCE
Confidence 3689999999999975322 2358888876432 2234567788888888 89999
Q ss_pred eeccccceeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....+++|||++ +++..++.. ....++...+..++.|++.||+|||++ +++||||||+||+++.
T Consensus 67 v~~~~~~~----~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~ 140 (262)
T cd05077 67 VLLYGVCV----RDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAR 140 (262)
T ss_pred eeEEEEEe----cCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEec
Confidence 99999876 4556789999994 555554433 334589999999999999999999998 9999999999999975
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh-c
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI-G 258 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~-~ 258 (393)
++.. ......++++|||++..... .....++..|+|||.+. +
T Consensus 141 ~~~~------------------------------------~~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~ 183 (262)
T cd05077 141 EGID------------------------------------GECGPFIKLSDPGIPITVLS-RQECVERIPWIAPECVEDS 183 (262)
T ss_pred CCcc------------------------------------CCCCceeEeCCCCCCccccC-cccccccccccChhhhcCC
Confidence 5420 01122489999998865432 22345788899999987 4
Q ss_pred CCCCchhhHHhHHHHHHHHH-hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELA-TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell-~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++|||||||++|+|+ .|..||...... ........
T Consensus 184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----------~~~~~~~~----------------------------- 224 (262)
T cd05077 184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA----------EKERFYEG----------------------------- 224 (262)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh----------HHHHHHhc-----------------------------
Confidence 56899999999999999998 488888643311 00000000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
........+..+.++|.+||..||.+||++.+|+++
T Consensus 225 ----------~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 225 ----------QCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ----------CccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 000112234578899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=288.29 Aligned_cols=276 Identities=20% Similarity=0.236 Sum_probs=176.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC----CceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD----KTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.++||+|+||.||+|.+..+ +..||+|.+.... ..|......+.+. .+.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e~~~~e~l~~~-----------~~~~~~~ 193 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVEIWMNERVRRA-----------CPNSCAD 193 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhHHHHHHHHHhh-----------chhhHHH
Confidence 46899999999999999999999988 8999999876422 1222222222111 1111111
Q ss_pred cccccee-e-cCCCeEEEEEEeec-cccHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 103 LLNDFKI-Y-SRNGTHICMVFEVM-GYNLLRLIARSDYK------------------GIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 103 ~~~~~~~-~-~~~~~~~~iv~e~~-~~~l~~~~~~~~~~------------------~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
+...+.. . ...+...++|+||+ +++|.+++...... ......+..++.|++.||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~ 273 (566)
T PLN03225 194 FVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS 273 (566)
T ss_pred HHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 0 13566799999999 67777777543210 01233466899999999999999
Q ss_pred cCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--
Q psy12288 162 QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-- 239 (393)
Q Consensus 162 ~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-- 239 (393)
+ +|+||||||+|||++.+.. .+||+|||++.....
T Consensus 274 ~-gIiHRDLKP~NILl~~~~~------------------------------------------~~KL~DFGlA~~l~~~~ 310 (566)
T PLN03225 274 T-GIVHRDVKPQNIIFSEGSG------------------------------------------SFKIIDLGAAADLRVGI 310 (566)
T ss_pred C-CEEeCcCCHHHEEEeCCCC------------------------------------------cEEEEeCCCcccccccc
Confidence 8 9999999999999975421 499999999975432
Q ss_pred --CCCCCCCCCCCchhHHHhcCC----------------------CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCc
Q psy12288 240 --HFADEIQTRQYRSVEVLIGAG----------------------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRD 295 (393)
Q Consensus 240 --~~~~~~~t~~y~aPE~~~~~~----------------------~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~ 295 (393)
......+++.|+|||.+.... ++.++|||||||++|+|+++..++.. .
T Consensus 311 ~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--------~ 382 (566)
T PLN03225 311 NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--------N 382 (566)
T ss_pred ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--------H
Confidence 123456789999999765332 23456999999999999987655421 2
Q ss_pred HHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc
Q psy12288 296 DDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375 (393)
Q Consensus 296 ~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 375 (393)
...+..+....+.....+..... . ... ......+...+.......+||.+||+.||++||
T Consensus 383 ~~~~~~~l~~~~~~~~~~~~~~~-------~---------~~~----~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ 442 (566)
T PLN03225 383 LIQFNRQLKRNDYDLVAWRKLVE-------P---------RAS----PDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI 442 (566)
T ss_pred HHHHHHHHHhcCCcHHHHHHhhc-------c---------ccc----hhhhhhhhhccccchHHHHHHHHHccCCcccCC
Confidence 22333333322221111110000 0 000 000011111223344667999999999999999
Q ss_pred CHHHHhcCCCCCCCC
Q psy12288 376 SAADCLRHPWLNPRR 390 (393)
Q Consensus 376 t~~ell~hp~~~~~~ 390 (393)
|++|+|+||||.+..
T Consensus 443 ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 443 SAKAALAHPYFDREG 457 (566)
T ss_pred CHHHHhCCcCcCCCC
Confidence 999999999998743
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=262.82 Aligned_cols=240 Identities=24% Similarity=0.296 Sum_probs=188.2
Q ss_pred EEecccCceEEEEEEeCC-CC--ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQ-DK--TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++||+|++|.||+|.+.. .+ ..||+|.+..... ..+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~ 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL--------------DHENLIRLYGVVL 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc--------------CCCCccceeEEEc
Confidence 368999999999998765 33 3689998875433 345678899999998 7899999988876
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
. ...+++||++ +++|.+.+.......+++..+..++.|++.||++||++ |++|+||+|+||+++.++
T Consensus 67 ----~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~------ 134 (257)
T cd05040 67 ----T-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDD------ 134 (257)
T ss_pred ----C-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCC------
Confidence 3 6789999999 78998888765434588999999999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhcCCC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++...... .....++..|+|||.+.+..+
T Consensus 135 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~ 177 (257)
T cd05040 135 -------------------------------------KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTF 177 (257)
T ss_pred -------------------------------------EEEeccccccccccccccceecccCCCCCceecCHHHhcccCc
Confidence 5999999998765432 112345778999999998889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|+||||+++|+|++ |..||...+ ..+....+.. .+.
T Consensus 178 ~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~-~~~-------------------------------- 218 (257)
T cd05040 178 SHASDVWMFGVTLWEMFTYGEEPWAGLS------GSQILKKIDK-EGE-------------------------------- 218 (257)
T ss_pred CchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHh-cCC--------------------------------
Confidence 999999999999999998 999996543 1222222111 000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..+|.+||++.++++
T Consensus 219 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 219 -------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred -------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 00011234567889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=265.98 Aligned_cols=261 Identities=18% Similarity=0.251 Sum_probs=190.7
Q ss_pred CeEEEEEEecccCceEEEEEEe----CCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWD----LQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+|++.+.||+|+||.||+|.. ..++..||+|.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~ 69 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL--------------QHDNIVK 69 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC--------------CCCCeeE
Confidence 4799999999999999999973 4568899999987543 2245678899999998 8899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+... ....+++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 70 ~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~ 145 (284)
T cd05081 70 YKGVCYSA--GRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESEN 145 (284)
T ss_pred EEEEEccC--CCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCC
Confidence 88866432 345689999999 788888876542 3488999999999999999999998 999999999999997766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC------CCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------~~~~t~~y~aPE~ 255 (393)
.++|+|||++........ ...++..|+|||.
T Consensus 146 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 182 (284)
T cd05081 146 -------------------------------------------RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPES 182 (284)
T ss_pred -------------------------------------------eEEECCCcccccccCCCcceeecCCCCCceEeeCHHH
Confidence 499999999876532211 1223446999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh-HHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK-EVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|+||||+++|+|++|..++...... .....+.... ...
T Consensus 183 ~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-------------------- 231 (284)
T cd05081 183 LTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-----------FMRMMGNDKQGQMI-------------------- 231 (284)
T ss_pred hccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-----------hhhhcccccccccc--------------------
Confidence 99888999999999999999999987765432210 0000000000 000
Q ss_pred CCCcchhHHHHh--hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLT--EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.......+. ...+.+...+..+.+++.+||..+|++|||+.++++.
T Consensus 232 ---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 232 ---VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred ---hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 000000000 0111223456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=268.68 Aligned_cols=246 Identities=20% Similarity=0.302 Sum_probs=189.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++...||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+ .|+++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l--------------~h~~i 70 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF--------------DHPNI 70 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc--------------CCCch
Confidence 579999999999999999998753 57789999887432 2235577899999998 88999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------------YKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------------~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
+++++.+. .+...+++|||+ +++|.+++.... ...++...+..++.|++.||++|
T Consensus 71 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l 146 (288)
T cd05050 71 VKLLGVCA----VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL 146 (288)
T ss_pred heEEEEEc----CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence 99988776 556789999999 678888876432 12367778899999999999999
Q ss_pred hhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC
Q psy12288 160 HTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239 (393)
Q Consensus 160 H~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~ 239 (393)
|++ +++|+||||+||+++.++ .++|+|||++.....
T Consensus 147 H~~-~i~H~dl~p~nil~~~~~-------------------------------------------~~~l~dfg~~~~~~~ 182 (288)
T cd05050 147 SER-KFVHRDLATRNCLVGENM-------------------------------------------VVKIADFGLSRNIYS 182 (288)
T ss_pred HhC-CeecccccHhheEecCCC-------------------------------------------ceEECccccceeccc
Confidence 998 999999999999997766 499999998865422
Q ss_pred C-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHH
Q psy12288 240 H-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313 (393)
Q Consensus 240 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~ 313 (393)
. ......+..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+. .+....+.. +..
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~------~~~~~~~~~--~~~---- 250 (288)
T cd05050 183 ADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH------EEVIYYVRD--GNV---- 250 (288)
T ss_pred CccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhc--CCC----
Confidence 1 112234667999999998889999999999999999997 8888865431 111111100 000
Q ss_pred HhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+||.+||..||.+|||+.|+++
T Consensus 251 -----------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 251 -----------------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred -----------------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0112344567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=266.14 Aligned_cols=245 Identities=16% Similarity=0.237 Sum_probs=190.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+|++.+.||+|+||.||+|.+..++. .+|+|.++... .....+.+|+.+++.+ .|+|+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 69 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF--------------DHPNIIH 69 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC--------------CCCCcce
Confidence 479999999999999999998865543 69999876432 2235678899999988 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. .+...+++||++ +++|.+.+.... ..++..++..++.|++.|+++||++ +++|+||||+||+++.++
T Consensus 70 ~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~ 143 (267)
T cd05066 70 LEGVVT----KSKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNL 143 (267)
T ss_pred EEEEEe----cCCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCC
Confidence 988876 566799999999 678887776543 4578899999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE~ 255 (393)
.++++|||.+....... ....++..|++||.
T Consensus 144 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~ 180 (267)
T cd05066 144 -------------------------------------------VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 180 (267)
T ss_pred -------------------------------------------eEEeCCCCcccccccccceeeecCCCccceeecCHhH
Confidence 49999999887553221 11223467999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|+||||+++|++++ |..||...+.. .....+.....
T Consensus 181 ~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~------~~~~~~~~~~~--------------------------- 227 (267)
T cd05066 181 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ------DVIKAIEEGYR--------------------------- 227 (267)
T ss_pred hccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH------HHHHHHhCCCc---------------------------
Confidence 998889999999999999999886 99999654421 11111111000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+++.+||+.+|.+||++.++++
T Consensus 228 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 228 --------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred --------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 0111234567889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG0193|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=282.23 Aligned_cols=244 Identities=20% Similarity=0.318 Sum_probs=189.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
-+...+.+.||+|.||.||+|++..+ ||||+++.. ....+.|++|+.+++.- .|.||+-+
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkT--------------RH~NIlLF 453 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKT--------------RHENILLF 453 (678)
T ss_pred HHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhc--------------chhhheee
Confidence 34677899999999999999988744 999999743 34567889999999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+++- +.. +.||+.+| |.+|..++.-.. ..|.....+.|++|++.|+.|||.+ +|+|||||..||++..+.
T Consensus 454 MG~~~----~p~-~AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~- 525 (678)
T KOG0193|consen 454 MGACM----NPP-LAIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDL- 525 (678)
T ss_pred ehhhc----CCc-eeeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCC-
Confidence 99886 444 49999999 556665554333 5588899999999999999999999 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~~~~t~~y~aPE~~~ 257 (393)
++|++|||++..-. .......|...|||||++.
T Consensus 526 ------------------------------------------kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIR 563 (678)
T KOG0193|consen 526 ------------------------------------------KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIR 563 (678)
T ss_pred ------------------------------------------cEEEecccceeeeeeeccccccCCCccchhhhcHHHHh
Confidence 59999999875322 1122345678899999997
Q ss_pred c---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHH--hCCCChHHHhcCcccccccCCCCCeee
Q psy12288 258 G---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL--VGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 258 ~---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
. .+|++.+||||||+++|||++|..||...+... |+-. .|...+
T Consensus 564 mqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq----------IifmVGrG~l~p--------------------- 612 (678)
T KOG0193|consen 564 MQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ----------IIFMVGRGYLMP--------------------- 612 (678)
T ss_pred hcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh----------eEEEecccccCc---------------------
Confidence 5 478999999999999999999999997333111 1000 010000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
........+..++.+|+..||.+++++||.+.+||.
T Consensus 613 --------------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 613 --------------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred --------------cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 000012456778999999999999999999999886
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=265.39 Aligned_cols=246 Identities=17% Similarity=0.258 Sum_probs=190.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.++|++.++||+|+||.||+|.+..+ ...|+||...... ...+.+.+|+.+++.+ .|+|++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~i~ 70 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF--------------DHPHIV 70 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC--------------CCCchh
Confidence 35799999999999999999987654 3468999876442 2345678899999998 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. ....+++||++ +++|.+++.... ..++...+..++.|++.||+|||+. +++|+||||+||+++.+
T Consensus 71 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~ 143 (270)
T cd05056 71 KLIGVIT-----ENPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSP 143 (270)
T ss_pred ceeEEEc-----CCCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecC
Confidence 9988765 23468999999 778888876543 3488999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVL 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~ 256 (393)
+ .++|+|||++....... ....++..|+|||.+
T Consensus 144 ~-------------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (270)
T cd05056 144 D-------------------------------------------CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESI 180 (270)
T ss_pred C-------------------------------------------CeEEccCceeeecccccceecCCCCccccccChhhh
Confidence 5 49999999887543221 122234679999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
....++.++|+||||+++|++++ |..||...+.. .....+.. +.
T Consensus 181 ~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~~~~~~--~~--------------------------- 225 (270)
T cd05056 181 NFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN------DVIGRIEN--GE--------------------------- 225 (270)
T ss_pred ccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHc--CC---------------------------
Confidence 88889999999999999999986 99999755421 11111110 00
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..+|.+|||+.+++..
T Consensus 226 ------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 226 ------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123456788899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=263.14 Aligned_cols=238 Identities=18% Similarity=0.303 Sum_probs=183.0
Q ss_pred EecccCceEEEEEEeC--CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDL--QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|... .++..||+|++.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~ii~~~~~~~-- 65 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL--------------DNPYIVRMIGVCE-- 65 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc--------------CCCCeEEEEEEEc--
Confidence 4899999999999765 345679999886542 2235578899999998 7899999988764
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~ 189 (393)
....++||||+ +++|.+.+.... ..+++..+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 66 ---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~-------- 132 (257)
T cd05115 66 ---AEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQH-------- 132 (257)
T ss_pred ---CCCeEEEEEeCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCC--------
Confidence 34589999999 677777765432 4589999999999999999999998 999999999999997665
Q ss_pred hhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....++..|+|||.+.+..++.
T Consensus 133 -----------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 177 (257)
T cd05115 133 -----------------------------------YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSS 177 (257)
T ss_pred -----------------------------------cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCc
Confidence 4999999988754322 11122356899999998888899
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|+||||+++|++++ |..||..... ......+.. +
T Consensus 178 ~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~----------------------------------- 214 (257)
T cd05115 178 RSDVWSYGITMWEAFSYGQKPYKKMKG------PEVMSFIEQ--G----------------------------------- 214 (257)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHHC--C-----------------------------------
Confidence 9999999999999996 9999975441 111111100 0
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....++...+.++.++|.+||..||++||++.++.+.
T Consensus 215 ----~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 215 ----KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0011234456788899999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=274.06 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=190.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-------CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-------KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..+|++.+.||+|+||.||+|++... ...||+|.++... .....+.+|+.+++.+. .|
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h 77 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG-------------KH 77 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc-------------CC
Confidence 45899999999999999999986542 2368999877432 22356778999998883 58
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
+|++++++.+. .....+++|||+ +++|.+++.... ...++..++..++.|++.||+|||++
T Consensus 78 ~~iv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 153 (334)
T cd05100 78 KNIINLLGACT----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ 153 (334)
T ss_pred CCeeeeeEEEc----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 89999988876 556789999999 778888876532 12367788889999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
|++||||||+||+++.++ .++|+|||+++.....
T Consensus 154 -givH~dlkp~Nill~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~ 189 (334)
T cd05100 154 -KCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARDVHNIDY 189 (334)
T ss_pred -CeeccccccceEEEcCCC-------------------------------------------cEEECCcccceecccccc
Confidence 999999999999997765 4999999998755322
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....++..|+|||++.+..++.++||||||+++|+|++ |..||...+. .+....+.. +.
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~-------- 253 (334)
T cd05100 190 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------EELFKLLKE--GH-------- 253 (334)
T ss_pred cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHc--CC--------
Confidence 112233567999999998889999999999999999998 8889865431 111111100 00
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.|++++
T Consensus 254 -------------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 254 -------------------------------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred -------------------------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 001123445678899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0664|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=263.86 Aligned_cols=287 Identities=28% Similarity=0.451 Sum_probs=217.6
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
-+-||.|+||+||.+.+..+|+.||+|.+.+ +-....++-+|+.+|-.+ .|.|++..+++..-
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF--------------kHdNVLSaLDILQP 123 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF--------------RHDNVLSLLDILQP 123 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh--------------ccccHHHHHHhcCC
Confidence 4689999999999999999999999998753 223356778899999888 77777777777652
Q ss_pred ecCC-CeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 110 YSRN-GTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 110 ~~~~-~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
...+ -..+|+++|.+..+|...+.+- +.++.+.++-+..||+.||+|||+. +|+||||||.|.|++.|.
T Consensus 124 ph~dfFqEiYV~TELmQSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNC------- 193 (449)
T KOG0664|consen 124 ANPSFFQELYVLTELMQSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNC------- 193 (449)
T ss_pred CCchHHHHHHHHHHHHHhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCc-------
Confidence 1111 1135778888888887766543 5689999999999999999999998 999999999999997766
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCC-CCc
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAG-YGP 263 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~-~~~ 263 (393)
.+|+||||+++.... +....+-|.+|+|||++.+.+ |+.
T Consensus 194 ------------------------------------vLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~ 237 (449)
T KOG0664|consen 194 ------------------------------------ILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTG 237 (449)
T ss_pred ------------------------------------eEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcC
Confidence 489999999986543 233345588999999999975 799
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
+.||||+||+|.|++..+..|...+ ...++..|.+++|....+..+-..+..+-.- .+.....+...
T Consensus 238 AvDiWSVGCIFaELLgRrILFQAq~------PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~----LR~~~k~Ps~~--- 304 (449)
T KOG0664|consen 238 AVDIWSVGCIFAELLQRKILFQAAG------PIEQLQMIIDLLGTPSQEAMKYACEGAKNHV----LRAGLRAPDTQ--- 304 (449)
T ss_pred ccceehhhHHHHHHHhhhhhhhccC------hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh----hccCCCCCCcc---
Confidence 9999999999999999999998877 6788999999999876655443333221110 01111111110
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 393 (393)
.+ .++.-+.......++++.++|.+||.+|++..+++.|+++...+.||
T Consensus 305 vL-YtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~ 353 (449)
T KOG0664|consen 305 RL-YKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRF 353 (449)
T ss_pred ce-eeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccceee
Confidence 00 01111224456677999999999999999999999999999888776
|
|
| >KOG1035|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=299.53 Aligned_cols=255 Identities=25% Similarity=0.350 Sum_probs=191.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+|+.++.||+||||.||+++++-+|..+|||.+... .....++.+|+.+|.++. ||||++++.
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn--------------HpNVVRYys 544 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN--------------HPNVVRYYS 544 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC--------------Ccceeeeeh
Confidence 4788899999999999999999999999999988754 333456788999999994 444444444
Q ss_pred cceee------------------------------------------------------c--------------------
Q psy12288 106 DFKIY------------------------------------------------------S-------------------- 111 (393)
Q Consensus 106 ~~~~~------------------------------------------------------~-------------------- 111 (393)
.+... .
T Consensus 545 AWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~d 624 (1351)
T KOG1035|consen 545 AWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSD 624 (1351)
T ss_pred hhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccc
Confidence 33210 0
Q ss_pred ----------------------------------C-------CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHH
Q psy12288 112 ----------------------------------R-------NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIK 150 (393)
Q Consensus 112 ----------------------------------~-------~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ 150 (393)
. ....+||-||||..++++.+.+.+...-..+..+++++
T Consensus 625 edg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFr 704 (1351)
T KOG1035|consen 625 EDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFR 704 (1351)
T ss_pred ccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHH
Confidence 0 01347999999988888888776532113778899999
Q ss_pred HHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEee
Q psy12288 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230 (393)
Q Consensus 151 ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~d 230 (393)
+|+.||+|+|++ ||+||||||.||+++.+. .+||+|
T Consensus 705 eIlEGLaYIH~~-giIHRDLKP~NIFLd~~~-------------------------------------------~VKIGD 740 (1351)
T KOG1035|consen 705 EILEGLAYIHDQ-GIIHRDLKPRNIFLDSRN-------------------------------------------SVKIGD 740 (1351)
T ss_pred HHHHHHHHHHhC-ceeeccCCcceeEEcCCC-------------------------------------------Ceeecc
Confidence 999999999998 999999999999998766 399999
Q ss_pred cCcccccc---------------------CCCCCCCCCCCCchhHHHhcCC---CCchhhHHhHHHHHHHHHhCCCCCCC
Q psy12288 231 LGNACWID---------------------DHFADEIQTRQYRSVEVLIGAG---YGPAADIWSTACMAFELATGDYLFDP 286 (393)
Q Consensus 231 fg~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~---~~~~~DiwSlG~~l~ell~g~~pf~~ 286 (393)
||++...- ...+..+||.-|+|||++.+.. |+.++|+||||++|+||+. ||..
T Consensus 741 FGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T 817 (1351)
T KOG1035|consen 741 FGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT 817 (1351)
T ss_pred cccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc
Confidence 99987610 1234558999999999998754 8999999999999999995 4632
Q ss_pred CCCCCCCCcHHHHHHHHHH-hCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHh
Q psy12288 287 KAGKEYSRDDDHLAHIVEL-VGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365 (393)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 365 (393)
..+...-+..+ .|.+|.+ ..|..+..+.-..+|++
T Consensus 818 --------sMERa~iL~~LR~g~iP~~------------------------------------~~f~~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 818 --------SMERASILTNLRKGSIPEP------------------------------------ADFFDPEHPEEASLIRW 853 (1351)
T ss_pred --------hHHHHHHHHhcccCCCCCC------------------------------------cccccccchHHHHHHHH
Confidence 22222222222 2344442 00122333455699999
Q ss_pred ccccCCCCCcCHHHHhcCCCCC
Q psy12288 366 MLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 366 ~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
||..||.+||||.|+|++.||-
T Consensus 854 Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HhcCCCccCCCHHHHhhccCCC
Confidence 9999999999999999999986
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=266.63 Aligned_cols=248 Identities=19% Similarity=0.255 Sum_probs=191.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.+.||+|+||.||+|.+.. ++..|++|.+.... .....+.+|+.+++.+ .|+|+
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~ni 70 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL--------------SHQNI 70 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC--------------CCCCC
Confidence 4689999999999999999999876 35789999886432 2245567899999988 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~------~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
+++++.... .+...+++++++ ++++.+++..... ..++...+..++.|++.||+|||++ +++|+||||+
T Consensus 71 ~~~~~~~~~---~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~ 146 (280)
T cd05043 71 LPILHVCIE---DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAAR 146 (280)
T ss_pred CeEEEEEec---CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHh
Confidence 998887642 245688999998 6788888755322 3488999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTR 248 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~ 248 (393)
||+++.++ .++++|||+++...... ....++.
T Consensus 147 nil~~~~~-------------------------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~ 183 (280)
T cd05043 147 NCVIDEEL-------------------------------------------QVKITDNALSRDLFPMDYHCLGDNENRPV 183 (280)
T ss_pred hEEEcCCC-------------------------------------------cEEECCCCCcccccCCceEEeCCCCCcch
Confidence 99997665 49999999987543211 1233467
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
.|+|||++.+..++.++||||||+++|++++ |+.||...+.. .....+.. +..
T Consensus 184 ~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~--~~~------------------ 237 (280)
T cd05043 184 KWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF------EMAAYLKD--GYR------------------ 237 (280)
T ss_pred hccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH------HHHHHHHc--CCC------------------
Confidence 7999999998889999999999999999998 99999654321 11110000 000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+..++..+.+++.+||..||++|||+.++++
T Consensus 238 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 238 ---------------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred ---------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0011234567889999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=263.92 Aligned_cols=242 Identities=18% Similarity=0.236 Sum_probs=183.4
Q ss_pred EEecccCceEEEEEEeCCCC----------ceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDK----------TFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.||+|+||.||+|.+..++ ..+++|.+.........+.+|+.+++.+ .|+|++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 66 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL--------------SHKHLVKL 66 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC--------------CCcchhhe
Confidence 46899999999999998776 3588887765443356778899999988 88999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. . ...++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++|+||||+||+++.++.
T Consensus 67 ~~~~~----~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~ 139 (259)
T cd05037 67 YGVCV----R-DENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGL 139 (259)
T ss_pred eeEEe----c-CCcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCcc
Confidence 98876 2 4578999999 677777776543 2588999999999999999999998 9999999999999986652
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC--C
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA--G 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~--~ 260 (393)
. ......++|+|||++..... .....++..|+|||++.+. .
T Consensus 140 ~------------------------------------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~ 182 (259)
T cd05037 140 N------------------------------------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQAS 182 (259)
T ss_pred c------------------------------------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCC
Confidence 0 00012499999999876543 2334567789999999876 6
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|+||||+++|+|++ |..||...+..+ . ........
T Consensus 183 ~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~------~-~~~~~~~~-------------------------------- 223 (259)
T cd05037 183 LTIAADKWSFGTTLLEICSNGEEPLSTLSSSE------K-ERFYQDQH-------------------------------- 223 (259)
T ss_pred cchhhHHHHHHHHHHHHHhCCCCCcccCCchh------H-HHHHhcCC--------------------------------
Confidence 8999999999999999999 577776543111 0 00000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+......+.++|.+||..+|.+|||+.++++
T Consensus 224 ----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 224 ----------RLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 011112267889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=267.02 Aligned_cols=260 Identities=21% Similarity=0.284 Sum_probs=191.0
Q ss_pred eEEEEEEecccCceEEEEEEe----CCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWD----LQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-|+++++||+|+||.||+|.. ..++..||+|.++... .....+.+|+.+++.+ .|+|+++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 70 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL--------------YHENIVK 70 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC--------------CCCCeee
Confidence 478999999999999999974 4568889999886432 2235678899999998 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+... +....+++|||+ +++|.+.+.+.. ..++..++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~~~~~~--~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~ 146 (284)
T cd05079 71 YKGICTED--GGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEH 146 (284)
T ss_pred eeeEEecC--CCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCC
Confidence 88877632 245689999999 788888775543 3478999999999999999999998 999999999999997765
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE~ 255 (393)
.++|+|||++....... ....++..|+|||.
T Consensus 147 -------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~ 183 (284)
T cd05079 147 -------------------------------------------QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC 183 (284)
T ss_pred -------------------------------------------CEEECCCccccccccCccceeecCCCCCCccccCHHH
Confidence 49999999987654321 12345677999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+..++.++||||||+++|+|+++..|+...... .....++.+.+...
T Consensus 184 ~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~-----------~~~~~~~~~~~~~~-------------------- 232 (284)
T cd05079 184 LIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL-----------FLKMIGPTHGQMTV-------------------- 232 (284)
T ss_pred hccCCCCccccchhhhhhhhhhhcCCCCCccccch-----------hhhhcccccccccH--------------------
Confidence 99888999999999999999999987665322110 00111111000000
Q ss_pred CCcchhHHHHh--hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLT--EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
........ .....+..++..+.+|+.+||..||.+|||++++++.
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 233 ---TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ---HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 00000000 0011123456789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG1095|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=297.10 Aligned_cols=246 Identities=21% Similarity=0.269 Sum_probs=199.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc-----eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT-----FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..-++.+.||+|+||.||.|....-.. .||||.++.. ......|.+|..+|..+ +||||
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f--------------~HpNi 757 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF--------------DHPNI 757 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC--------------CCcce
Confidence 467788999999999999998765432 3899988754 34456788999999999 99999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
++++++.. .....+|++||| +|+|+.++.+.. ...++..+...++.||++|+.||+++ +.|||||-.+|
T Consensus 758 v~liGv~l----~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRN 832 (1025)
T KOG1095|consen 758 VSLIGVCL----DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARN 832 (1025)
T ss_pred eeEEEeec----CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhh
Confidence 99999998 466689999999 999999998762 23488999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQ 249 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~ 249 (393)
+|++... .+|++|||+|+.+..... ....+..
T Consensus 833 CLL~~~r-------------------------------------------~VKIaDFGlArDiy~~~yyr~~~~a~lPvk 869 (1025)
T KOG1095|consen 833 CLLDERR-------------------------------------------VVKIADFGLARDIYDKDYYRKHGEAMLPVK 869 (1025)
T ss_pred eeecccC-------------------------------------------cEEEcccchhHhhhhchheeccCcccccee
Confidence 9997664 599999999995432211 1233567
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|||||.+....++.++|||||||++||+++ |..||.+.+..+ .+. .....|
T Consensus 870 Wm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~------v~~-~~~~gg--------------------- 921 (1025)
T KOG1095|consen 870 WMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE------VLL-DVLEGG--------------------- 921 (1025)
T ss_pred cCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH------HHH-HHHhCC---------------------
Confidence 999999999999999999999999999999 999998665321 111 111111
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+.+-|..++..+.++|.+||+.+|++||++..|++
T Consensus 922 -------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 922 -------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred -------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 22234677889999999999999999999999886
|
|
| >KOG4250|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=283.68 Aligned_cols=275 Identities=23% Similarity=0.363 Sum_probs=200.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.-+...+.||+|+||.||+++++.+|+.||||.++... ...+..-+|+++|+++ +|+|||++++
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL--------------nh~NIVk~f~ 78 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL--------------NHPNIVKLFD 78 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc--------------Cchhhhhhcc
Confidence 34667889999999999999999999999999987643 3456677999999999 8999999988
Q ss_pred cceeec--CCCeEEEEEEeec-cccHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 106 DFKIYS--RNGTHICMVFEVM-GYNLLRLIARS-DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 106 ~~~~~~--~~~~~~~iv~e~~-~~~l~~~~~~~-~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+=.... -.....+++|||| +|+|...+.+- +..++++.+++.+...+..||.|||++ ||+||||||.||++-...
T Consensus 79 iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 79 IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred cCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecC
Confidence 765322 1145689999999 88998888542 234599999999999999999999998 999999999999885433
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhc-
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~- 258 (393)
. .....||+|||.|+.+.+ .....+||+.|.+||+...
T Consensus 158 d---------------------------------------gq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q 198 (732)
T KOG4250|consen 158 D---------------------------------------GQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQ 198 (732)
T ss_pred C---------------------------------------CceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhc
Confidence 1 122589999999998754 3556789999999999995
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
+.|+.-+|.|||||++|+++||..||.+.....- .......+.. .-|..+..... ...++ +
T Consensus 199 ~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~--~~~~~~~~~t---kkp~~v~i~~~------------~~eNg--p 259 (732)
T KOG4250|consen 199 KKYTATVDLWSFGVTLYECATGELPFIPFGGPKN--NKEIMWHIIT---KKPSGVAIGAQ------------EEENG--P 259 (732)
T ss_pred cCcCceeehhhhhhHHHHHhccCCCCCcCCCccc--cchhhhhhhc---cCCCceeEeee------------cccCC--c
Confidence 7789999999999999999999999976543310 0111111111 11111110000 00000 1
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 375 (393)
-.....++....++......+-..+..+|.++|++|.
T Consensus 260 v~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 260 VEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 1112233334445556666777888999999999998
|
|
| >KOG0696|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=267.14 Aligned_cols=252 Identities=22% Similarity=0.321 Sum_probs=208.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc----hhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
..+|..+.+||.|+||.|-+|..+.+.+.+|||+++++.... +--..|-++|+..+ .-|.++.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~-------------kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-------------KPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCC-------------CCchHHH
Confidence 468999999999999999999999999999999998764332 22234555555543 4456777
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+..+|+ .-+.++.||||+ ||+|-..+..- +.+.+..+..++.+|+-||-|||++ ||++||||.+||+++.++
T Consensus 415 lHScFQ----TmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eG 487 (683)
T KOG0696|consen 415 LHSCFQ----TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEG 487 (683)
T ss_pred HHHHhh----hhhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCC
Confidence 888887 556799999999 78887777543 4588889999999999999999999 999999999999999888
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~ 258 (393)
.+|++|||.+..- +....+.+||+.|+|||++.-
T Consensus 488 -------------------------------------------HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~Y 524 (683)
T KOG0696|consen 488 -------------------------------------------HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAY 524 (683)
T ss_pred -------------------------------------------ceEeeecccccccccCCcceeeecCCCcccccceEEe
Confidence 4999999998743 233456789999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.+|+.++|.||+||++|||+.|++||.+.. +.+..+.|++
T Consensus 525 qPYgksvDWWa~GVLLyEmlaGQpPFdGeD------E~elF~aI~e---------------------------------- 564 (683)
T KOG0696|consen 525 QPYGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQAIME---------------------------------- 564 (683)
T ss_pred cccccchhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHH----------------------------------
Confidence 999999999999999999999999998877 4444444443
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
.+..+|...|.++.++++..|...|.+|+.+ +++-+||||+.+
T Consensus 565 --------hnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 565 --------HNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred --------ccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 3444667778899999999999999999964 789999999875
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=264.12 Aligned_cols=241 Identities=21% Similarity=0.263 Sum_probs=183.7
Q ss_pred EecccCceEEEEEEeCCCCc--eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQDKT--FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|....++. .+++|.++.. ....+.+.+|+.++..++ .|+|++++++.+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~~iv~~~~~~~-- 66 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-------------HHPNIINLLGACE-- 66 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-------------cCCCeeeEEEEEe--
Confidence 68999999999999988775 4688877642 223456778999998884 6889999998886
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
....++++|||+ +++|.+++.... ...++...+..++.|++.||+|||+. |++|+||||+||
T Consensus 67 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~ni 143 (270)
T cd05047 67 --HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNI 143 (270)
T ss_pred --cCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceE
Confidence 556789999999 788888876432 12478889999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchh
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aP 253 (393)
+++.++ .++++|||++...... ......+..|+||
T Consensus 144 li~~~~-------------------------------------------~~kl~dfgl~~~~~~~~~~~~~~~~~~y~ap 180 (270)
T cd05047 144 LVGENY-------------------------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 180 (270)
T ss_pred EEcCCC-------------------------------------------eEEECCCCCccccchhhhccCCCCccccCCh
Confidence 998766 5999999987533221 1112335679999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++....++.++|+||||+++|+|++ |..||.+.+. ......+.. +.
T Consensus 181 E~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~~~~~~~~~--~~------------------------ 228 (270)
T cd05047 181 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLPQ--GY------------------------ 228 (270)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH------HHHHHHHhC--CC------------------------
Confidence 99988889999999999999999997 9999965331 111111100 00
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.+++..
T Consensus 229 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 229 ---------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred ---------------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 001112345678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=266.55 Aligned_cols=243 Identities=19% Similarity=0.219 Sum_probs=177.2
Q ss_pred EecccCceEEEEEEeCCC------------------------CceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCc
Q psy12288 35 KLGWGHFSTVWLSWDLQD------------------------KTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~------------------------~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
.||+|+||.||+|....+ ...|++|++..... ....+.+|..+++.+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-------- 73 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-------- 73 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC--------
Confidence 589999999999975322 23588898864322 234566777788777
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|+|++++++.+. .+...++||||+ +++|...+.. ....++...+..++.|++.||+|||++ +++||
T Consensus 74 ------~h~niv~~~~~~~----~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~ 141 (274)
T cd05076 74 ------SHIHLAFVHGVCV----RGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDK-NLVHG 141 (274)
T ss_pred ------CCCCeeeEEEEEE----eCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCC
Confidence 8999999999876 566789999999 5565555543 334588999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~ 248 (393)
||||+||+++.++.. ......++++|||.+..... .....++.
T Consensus 142 dlkp~Nill~~~~~~------------------------------------~~~~~~~kl~d~g~~~~~~~-~~~~~~~~ 184 (274)
T cd05076 142 NVCAKNILLARLGLA------------------------------------EGTSPFIKLSDPGVSFTALS-REERVERI 184 (274)
T ss_pred CCCcccEEEeccCcc------------------------------------cCccceeeecCCcccccccc-ccccccCC
Confidence 999999999754310 00012489999998754322 22345678
Q ss_pred CCchhHHHhc-CCCCchhhHHhHHHHHHHHH-hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 249 QYRSVEVLIG-AGYGPAADIWSTACMAFELA-TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 249 ~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell-~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
.|+|||.+.+ ..++.++|+||||+++|+++ +|..||......+ . .....
T Consensus 185 ~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~-~~~~~---------------------- 235 (274)
T cd05076 185 PWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE------K-ERFYE---------------------- 235 (274)
T ss_pred cccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH------H-HHHHH----------------------
Confidence 8999999876 45799999999999999995 6899986543211 0 00000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.++|.+||..+|++|||+.+++++
T Consensus 236 --------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 236 --------------------KKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred --------------------hccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 0011112233568899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=259.19 Aligned_cols=239 Identities=20% Similarity=0.289 Sum_probs=184.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
++||+|+||.||+|... ++..+|+|.+.... .....+.+|+.+++.+ .|+|++++.+.+.
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~~--- 62 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQY--------------DHPNIVKLIGVCT--- 62 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC--------------CCCCcCeEEEEEe---
Confidence 36899999999999754 67889999876432 1234577899999988 8999999998876
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++||||+ +++|.+.+.... ..+.+..+..++.|++.||.++|++ |++|+||+|+||+++.++
T Consensus 63 -~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~--------- 130 (250)
T cd05085 63 -QRQPIYIVMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENN--------- 130 (250)
T ss_pred -cCCccEEEEECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCC---------
Confidence 556789999999 788887775543 3478899999999999999999998 999999999999997666
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhcCCCCchhh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++|+|||++........ ...++..|+|||++.+..++.++|
T Consensus 131 ----------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 176 (250)
T cd05085 131 ----------------------------------VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESD 176 (250)
T ss_pred ----------------------------------eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhH
Confidence 499999998865432211 123356799999998888899999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
+||||+++|++++ |..||..... ......+.. +.
T Consensus 177 i~slG~ll~~~~~~g~~p~~~~~~------~~~~~~~~~--~~------------------------------------- 211 (250)
T cd05085 177 VWSYGILLWETFSLGVCPYPGMTN------QQAREQVEK--GY------------------------------------- 211 (250)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHHc--CC-------------------------------------
Confidence 9999999999998 9999965431 111111100 00
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|++||++.++++.
T Consensus 212 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 212 --RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred --CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 001123455788999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=267.26 Aligned_cols=245 Identities=16% Similarity=0.231 Sum_probs=181.9
Q ss_pred EEecccCceEEEEEEeCCCCc-------eEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKT-------FVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~-------~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.||+|+||.||+|.+..++. .+++|.+..+. ...+.+.+|..+++.+ .|+|++++++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~--------------~h~~iv~~~~ 66 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL--------------SHKHLVLNYG 66 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC--------------CCCChhheee
Confidence 368999999999998865543 48888775432 2345677888888888 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|..++.... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++...
T Consensus 67 ~~~----~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~ 140 (258)
T cd05078 67 VCV----CGDESIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRK 140 (258)
T ss_pred EEE----eCCCcEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccc
Confidence 887 455688999999 667777765543 3588899999999999999999998 999999999999998765310
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC-CCCc
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGP 263 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~ 263 (393)
......++++|||.+..... .....++..|+|||++.+. .++.
T Consensus 141 -----------------------------------~~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ 184 (258)
T cd05078 141 -----------------------------------TGNPPFIKLSDPGISITVLP-KEILLERIPWVPPECIENPQNLSL 184 (258)
T ss_pred -----------------------------------cCCCceEEecccccccccCC-chhccccCCccCchhccCCCCCCc
Confidence 00112489999998765432 2234568889999999874 4789
Q ss_pred hhhHHhHHHHHHHHHhCC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELATGD-YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~-~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|+||||+++|+|++|. .||..... .... ....
T Consensus 185 ~~DiwslG~~l~~l~~g~~~~~~~~~~------~~~~-~~~~-------------------------------------- 219 (258)
T cd05078 185 AADKWSFGTTLWEIFSGGDKPLSALDS------QKKL-QFYE-------------------------------------- 219 (258)
T ss_pred hhhHHHHHHHHHHHHcCCCCChhhccH------HHHH-HHHH--------------------------------------
Confidence 999999999999999984 55543221 0000 0000
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....++...+..+.++|.+||+.||.+|||++++++.
T Consensus 220 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 220 ----DRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ----ccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0111223344678899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG0587|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=283.74 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=218.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+.|++.++||.|++|.||++.+..+++.+|+|++.......+.+..|.++|+... .|+|++.+++.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~-------------~hpnv~~fyg~ 84 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS-------------HHPNVATFYGA 84 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-------------CCCCcceEEEE
Confidence 46799999999999999999999999999999999988777888899999999984 89999999999
Q ss_pred ceeecC-CCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 107 FKIYSR-NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 107 ~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
|....+ .++++|+|||+| +|+..+++....+..+.++.+..|++.++.|+.+||.+ .++|||||-.|||++.++
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~--- 160 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENA--- 160 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccC---
Confidence 986544 468999999999 88999999887777799999999999999999999998 999999999999999887
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC--
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~-- 259 (393)
.+||+|||.+..+.. .....+||+.|||||++...
T Consensus 161 ----------------------------------------~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~ 200 (953)
T KOG0587|consen 161 ----------------------------------------EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDES 200 (953)
T ss_pred ----------------------------------------cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccC
Confidence 399999999877653 34567899999999999754
Q ss_pred ---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 260 ---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 260 ---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.|...+|+||||++..||.-|.+|+.+.-+.. -++.+...+|+.+ .
T Consensus 201 ~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---------aLF~IpRNPPPkL-k--------------------- 249 (953)
T KOG0587|consen 201 PDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---------ALFLIPRNPPPKL-K--------------------- 249 (953)
T ss_pred CCCCcccccchhhccceeehhcCCCCCccCcchhh---------hhccCCCCCCccc-c---------------------
Confidence 36788999999999999999999996544221 1111111111111 1
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
-+..-+..|.+||..||..|-++||+..++|+|||++.
T Consensus 250 --------------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 250 --------------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred --------------chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 12344678999999999999999999999999999983
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=265.84 Aligned_cols=261 Identities=21% Similarity=0.283 Sum_probs=193.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCC----CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ----DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.|++.+.||+|+||.||+|.... +++.+|+|.+..... ..+.+.+|+.+++.+ .|+|++
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l--------------~~~~i~ 69 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL--------------DHENIV 69 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC--------------CCCChh
Confidence 478899999999999999998643 478899999886544 256788999999998 788999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++.+.+.. ..+.+.+++|||+ ++++.+++.... ..++...+..++.|++.||++||+. |++|+||||+||+++.+
T Consensus 70 ~~~~~~~~--~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~ 145 (284)
T cd05038 70 KYKGVCEK--PGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESE 145 (284)
T ss_pred eEEeeeec--CCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCC
Confidence 98887652 2356789999999 778888876543 3488999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE 254 (393)
+ .++|+|||.+....... ....++..|++||
T Consensus 146 ~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe 182 (284)
T cd05038 146 D-------------------------------------------LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPE 182 (284)
T ss_pred C-------------------------------------------CEEEcccccccccccCCcceeccCCCCCcccccCcH
Confidence 5 49999999987654221 1223456799999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+.+..++.++|+||||+++|+|++|..||........ ...+..+...
T Consensus 183 ~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-----------~~~~~~~~~~--------------------- 230 (284)
T cd05038 183 CLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL-----------RMIGIAQGQM--------------------- 230 (284)
T ss_pred HHccCCCCcccchHHHhhhhheeeccCCCcccccchhc-----------cccccccccc---------------------
Confidence 99988899999999999999999999998854322110 0000000000
Q ss_pred CCCcchhHHHHhh--hccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTE--KYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
........+.. ....+..++..+.+++.+||..+|.+|||+.|+++.
T Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 231 --IVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred --cHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 00000000000 011123345778999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=263.46 Aligned_cols=248 Identities=19% Similarity=0.296 Sum_probs=191.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.+.||+|+||.||+|+...+ .+.|++|.+..... ..+.+.+|+.+++.+ .|+|+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 70 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL--------------SHKNV 70 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc--------------CCcce
Confidence 5799999999999999999987543 45799998765332 245688999999999 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-------~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
+++++.+. .....++|||++ +++|.+++..... ..++...+..++.|++.||+|||+. +++|+||||
T Consensus 71 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp 145 (275)
T cd05046 71 VRLLGLCR----EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAA 145 (275)
T ss_pred eeeEEEEC----CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCcc
Confidence 99988775 556789999999 6788888765431 1488999999999999999999998 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTR 248 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~ 248 (393)
+||+++.++ .++++|||++...... .....++.
T Consensus 146 ~Nili~~~~-------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 182 (275)
T cd05046 146 RNCLVSSQR-------------------------------------------EVKVSLLSLSKDVYNSEYYKLRNALIPL 182 (275)
T ss_pred ceEEEeCCC-------------------------------------------cEEEcccccccccCcccccccCCceeEE
Confidence 999998766 3899999987643221 12234567
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
.|++||.+.+...+.++||||||+++|++++ |..||..... ...+..+.. +..+
T Consensus 183 ~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~------~~~~~~~~~--~~~~----------------- 237 (275)
T cd05046 183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD------EEVLNRLQA--GKLE----------------- 237 (275)
T ss_pred eecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch------HHHHHHHHc--CCcC-----------------
Confidence 7999999988888999999999999999998 8889864331 111111100 0000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||.+|||+.|++..
T Consensus 238 ---------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 238 ---------------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred ---------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 00123455688899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=259.57 Aligned_cols=239 Identities=19% Similarity=0.286 Sum_probs=185.9
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
++||+|++|.||+|.+.. ++.|++|.+..... ....+.+|+.+++.+ .|++++++++.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l--------------~~~~i~~~~~~~~--- 62 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY--------------DHPNIVKLIGVCV--- 62 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCeEEEEEEEe---
Confidence 368999999999999877 89999998775432 245678899999988 8899999888776
Q ss_pred CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhh
Q psy12288 112 RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190 (393)
Q Consensus 112 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~ 190 (393)
.....++|||++ ++++.+.+.... ..++...+..++.|++.||++||++ +++|+||+|+||+++.++
T Consensus 63 -~~~~~~~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~--------- 130 (251)
T cd05041 63 -QKQPIYIVMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENN--------- 130 (251)
T ss_pred -cCCCeEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCC---------
Confidence 556789999999 778887775532 3578899999999999999999998 999999999999998766
Q ss_pred hhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHHHhcCCCCchh
Q psy12288 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++....... .....+..|+|||.+.+..++.++
T Consensus 131 ----------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~ 176 (251)
T cd05041 131 ----------------------------------VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSES 176 (251)
T ss_pred ----------------------------------cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcch
Confidence 49999999987543211 112235679999999888899999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
|+||||+++|+|++ |..||...... .....+ ....
T Consensus 177 Di~slG~i~~~l~t~~~~p~~~~~~~------~~~~~~-~~~~------------------------------------- 212 (251)
T cd05041 177 DVWSYGILLWETFSLGDTPYPGMSNQ------QTRERI-ESGY------------------------------------- 212 (251)
T ss_pred hHHHHHHHHHHHHhccCCCCccCCHH------HHHHHH-hcCC-------------------------------------
Confidence 99999999999999 88888654311 111111 0000
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+|||+.|+++.
T Consensus 213 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 213 ---RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred ---CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 001123445688899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=262.51 Aligned_cols=245 Identities=21% Similarity=0.301 Sum_probs=190.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+|++.+.||+|+||.||+|.+..++. .+|+|.+..... ....+.+|+.+++.+ .|+|+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 71 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV--------------DHPHV 71 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC--------------CCCCc
Confidence 3589999999999999999999877655 589998765432 235677899999998 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. . ...+++||++ +++|.+.+.... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.
T Consensus 72 ~~~~~~~~----~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~ 144 (279)
T cd05057 72 VRLLGICL----S-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKT 144 (279)
T ss_pred ceEEEEEe----c-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcC
Confidence 99998776 2 5688999999 788888876543 3488999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVE 254 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE 254 (393)
++ .++|+|||.++....... ...++..|++||
T Consensus 145 ~~-------------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (279)
T cd05057 145 PQ-------------------------------------------HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALE 181 (279)
T ss_pred CC-------------------------------------------eEEECCCcccccccCcccceecCCCcccccccCHH
Confidence 65 499999999876532211 112356799999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+....++.++|+||||+++|++++ |..||.+... ... ...+.....
T Consensus 182 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~-~~~~~~~~~------------------------- 229 (279)
T cd05057 182 SILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA------VEI-PDLLEKGER------------------------- 229 (279)
T ss_pred HhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH------HHH-HHHHhCCCC-------------------------
Confidence 9988888999999999999999998 9999965431 111 111110000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+++.+||..||.+||++.++++
T Consensus 230 ---------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 230 ---------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0112234467889999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=262.90 Aligned_cols=244 Identities=19% Similarity=0.260 Sum_probs=185.5
Q ss_pred EecccCceEEEEEEeCCCC------ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 35 KLGWGHFSTVWLSWDLQDK------TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.||+|+||.||+|...... +.++||.+.... .....+.+|+.+++.+ .|++++++++.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~ 67 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF--------------NHPNIVKLLGV 67 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc--------------CCCCeeeEeee
Confidence 6899999999999876543 679999876432 2345677899999988 89999999988
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSD-----YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+. .....+++||++ +++|.+.+.... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.+
T Consensus 68 ~~----~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~ 142 (269)
T cd05044 68 CL----LNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEK 142 (269)
T ss_pred ec----CCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecC
Confidence 76 456789999998 788888876432 23377889999999999999999998 99999999999999765
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~ 255 (393)
... ....++++|||++...... .....++..|+|||.
T Consensus 143 ~~~--------------------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 184 (269)
T cd05044 143 GYD--------------------------------------ADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPES 184 (269)
T ss_pred CCC--------------------------------------CCcceEECCcccccccccccccccCcccCCCccccCHHH
Confidence 410 0114899999988654321 122345678999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|+|++ |..||...+ .......+ ....
T Consensus 185 ~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~------~~~~~~~~-~~~~--------------------------- 230 (269)
T cd05044 185 LLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN------NQEVLQHV-TAGG--------------------------- 230 (269)
T ss_pred HccCCcccchhHHHHHHHHHHHHHcCCCCCcccC------HHHHHHHH-hcCC---------------------------
Confidence 998889999999999999999998 999996443 11111111 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.++|.+||..+|.+||+++++++
T Consensus 231 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 -------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred -------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00112345678889999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0608|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=273.93 Aligned_cols=260 Identities=22% Similarity=0.353 Sum_probs=205.7
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
...+-..-|..++.||-|+||.|.+++...|...+|.|.+.+.. .....+..|-.+|... +.
T Consensus 623 RaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA--------------Dn 688 (1034)
T KOG0608|consen 623 RAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA--------------DN 688 (1034)
T ss_pred HhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc--------------CC
Confidence 33344567899999999999999999999999999999887542 2234456788888887 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+=||+++-.|+ +.+.+|.||+|+ ||++-.++++... |.++.++.++.++..|+++.|.. |.+||||||+|||
T Consensus 689 ~WVVrLyySFQ----DkdnLYFVMdYIPGGDmMSLLIrmgI--FeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNIL 761 (1034)
T KOG0608|consen 689 EWVVRLYYSFQ----DKDNLYFVMDYIPGGDMMSLLIRMGI--FEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNIL 761 (1034)
T ss_pred cceEEEEEEec----cCCceEEEEeccCCccHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceE
Confidence 88999999998 777899999999 8999999888643 89999999999999999999987 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---C-------------C
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---D-------------H 240 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~-------------~ 240 (393)
+|.|+. +||+|||++.-+. . +
T Consensus 762 IDrdGH-------------------------------------------IKLTDFGLCTGfRWTHdskYYq~gdH~RqDS 798 (1034)
T KOG0608|consen 762 IDRDGH-------------------------------------------IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDS 798 (1034)
T ss_pred EccCCc-------------------------------------------eeeeeccccccceeccccccccCCCcccccc
Confidence 999984 9999999874321 0 0
Q ss_pred -----------------------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC
Q psy12288 241 -----------------------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKE 291 (393)
Q Consensus 241 -----------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~ 291 (393)
.-..+||+.|+|||++...+++..+|+||.||+||||+.|++||...+..+
T Consensus 799 mep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 799 MEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred CCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence 001278999999999999999999999999999999999999997766433
Q ss_pred CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCC
Q psy12288 292 YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQ 371 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 371 (393)
... +.. .|..+ -.+......+.++.++|.++.+ ++
T Consensus 879 tq~---------------------kv~-------------------nw~~~----l~~~~~~~ls~e~~~li~kLc~-sa 913 (1034)
T KOG0608|consen 879 TQY---------------------KVI-------------------NWRNF----LHIPYQGNLSKEALDLIQKLCC-SA 913 (1034)
T ss_pred cee---------------------eee-------------------ehhhc----cccccccccCHHHHHHHHHHhc-Ch
Confidence 210 000 00000 0112234567788898887655 89
Q ss_pred CCCcC---HHHHhcCCCCCCCC
Q psy12288 372 KLRAS---AADCLRHPWLNPRR 390 (393)
Q Consensus 372 ~~Rpt---~~ell~hp~~~~~~ 390 (393)
.+|+. ++|+-.||||+++.
T Consensus 914 d~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 914 DSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred hhhhcccchhhhhcCccccccc
Confidence 99994 78899999999863
|
|
| >KOG0614|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=276.14 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=212.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+.+++..||-|+||.|=++........+|+|++++. +...+.+..|-.+|... ..+.|+++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~--------------~s~fIvrL 485 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC--------------RSDFIVRL 485 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc--------------CchHHHHH
Confidence 4578899999999999999977766666889988753 33345667888888888 78899999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+..|. +..++|+.||-| ||.++..+..+ +.|....++.++.++++|++|||.+ ||++|||||+|.+++.++.
T Consensus 486 YrTfr----d~kyvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy 558 (732)
T KOG0614|consen 486 YRTFR----DSKYVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGY 558 (732)
T ss_pred HHHhc----cchhhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCc
Confidence 99998 788999999999 99999998776 4599999999999999999999998 9999999999999998885
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~ 260 (393)
+||.|||+|..++.. .-+.+||+.|.|||++.+.+
T Consensus 559 -------------------------------------------~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKG 595 (732)
T KOG0614|consen 559 -------------------------------------------LKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKG 595 (732)
T ss_pred -------------------------------------------eEEeehhhHHHhccCCceeeecCCcccccchhhhccC
Confidence 999999999987644 34578999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
...++|.||||+++|||++|.+||.+.+++.. ....+..+
T Consensus 596 HD~avDyWaLGIli~ELL~G~pPFs~~dpmkt--Yn~ILkGi-------------------------------------- 635 (732)
T KOG0614|consen 596 HDRAVDYWALGILIYELLTGSPPFSGVDPMKT--YNLILKGI-------------------------------------- 635 (732)
T ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCchHHH--HHHHHhhh--------------------------------------
Confidence 99999999999999999999999987764432 11111111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
...+||........+||+++...+|.+|+. +.++-.|-||.+.
T Consensus 636 ------d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 636 ------DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred ------hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 223466677788889999999999999997 8999999999874
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=264.44 Aligned_cols=245 Identities=20% Similarity=0.272 Sum_probs=187.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+|++.+.||+|+||.||+|.+..++. .||+|.+..... ....+.+|+.+++.+ .|+|++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~niv 72 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM--------------DHPHLV 72 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCcc
Confidence 578999999999999999999887776 468887764322 123567888888888 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. . ...+++++++ ++++.+.+.... ..++...+..++.|++.||+|||++ +++|+||||+||+++.+
T Consensus 73 ~~~~~~~----~-~~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~ 145 (303)
T cd05110 73 RLLGVCL----S-PTIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSP 145 (303)
T ss_pred cEEEEEc----C-CCceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCC
Confidence 9998775 2 2356889998 688888876543 3478889999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~ 255 (393)
+ .+||+|||++....... ....++..|++||.
T Consensus 146 ~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 182 (303)
T cd05110 146 N-------------------------------------------HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 182 (303)
T ss_pred C-------------------------------------------ceEEccccccccccCcccccccCCCccccccCCHHH
Confidence 5 49999999987653221 12234678999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|++++ |..||.+... ............
T Consensus 183 ~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~-------------------------- 229 (303)
T cd05110 183 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-------REIPDLLEKGER-------------------------- 229 (303)
T ss_pred hccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHCCCC--------------------------
Confidence 998889999999999999999997 8899965331 111111110000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|++||+++++++.
T Consensus 230 --------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 230 --------------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred --------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00112234577899999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=258.75 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=187.5
Q ss_pred eEEEEEEecccCceEEEEEEeCC-CCceEEEEEEecccc-----------cchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQV-----------YADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~-----------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ....+..|+.++... ..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-------------~~ 67 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ-------------LR 67 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc-------------CC
Confidence 48889999999999999999888 678899998753211 112344566655542 17
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
|+|++++++.+. .+...+++|||+ ++++.+.+.. .....++...+..++.|++.||.+||+..+++|+||+|+
T Consensus 68 h~~i~~~~~~~~----~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~ 143 (269)
T cd08528 68 HPNIVRYYKTFL----ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPN 143 (269)
T ss_pred CCCeeeEEeeEc----cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHH
Confidence 899999999886 667899999999 6777776643 223458899999999999999999996338999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCc
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYR 251 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~ 251 (393)
||+++.++ .++|+|||.+...... .....++..|+
T Consensus 144 nil~~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 180 (269)
T cd08528 144 NIMLGEDD-------------------------------------------KVTITDFGLAKQKQPESKLTSVVGTILYS 180 (269)
T ss_pred HEEECCCC-------------------------------------------cEEEecccceeecccccccccccCcccCc
Confidence 99997766 4999999998765432 23446788999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
+||.+.+..++.++|+||||+++|+|++|+.||..... ......+.. +..+.
T Consensus 181 ~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~------~~~~~~~~~--~~~~~-------------------- 232 (269)
T cd08528 181 CPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM------LSLATKIVE--AVYEP-------------------- 232 (269)
T ss_pred ChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH------HHHHHHHhh--ccCCc--------------------
Confidence 99999988899999999999999999999999964331 111111111 00000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
......+..+.++|++||..||.+||++.|+.++
T Consensus 233 ------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 ------------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ------------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0001234678899999999999999999998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=257.87 Aligned_cols=244 Identities=19% Similarity=0.219 Sum_probs=176.7
Q ss_pred EEecccCceEEEEEEeCC--CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
++||+|+||.||+|.... ....+++|.+..... ....+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~nii~~~~~~~- 65 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL--------------NHPNVLQCLGQCI- 65 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC--------------CCCCcceEEEEEC-
Confidence 368999999999996543 345688887654321 123466788888887 8999999998876
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSDY---KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.....++||||+ +++|.+.+..... ...+...+..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 66 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~---- 137 (269)
T cd05042 66 ---ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADL---- 137 (269)
T ss_pred ---CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCC----
Confidence 566799999999 6788888765432 2245677889999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhc--
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIG-- 258 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~-- 258 (393)
.++++|||++...... .....++..|+|||++..
T Consensus 138 ---------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (269)
T cd05042 138 ---------------------------------------SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRG 178 (269)
T ss_pred ---------------------------------------cEEEeccccccccccchheeccCCCCCcccccCHHHHhhcc
Confidence 4999999988643211 122344677999999854
Q ss_pred -----CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCC-CChHHHhcCcccccccCCCCCee
Q psy12288 259 -----AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGP-IPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 259 -----~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
..++.++|||||||++|+|++ |..||.... ..+.+......... .|.
T Consensus 179 ~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~-------------------- 232 (269)
T cd05042 179 QDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS------DEQVLKQVVREQDIKLPK-------------------- 232 (269)
T ss_pred ccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhhccCccCCC--------------------
Confidence 346889999999999999999 788886443 22222222111100 000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++..|+ .||.+|||++++++-
T Consensus 233 -----------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 233 -----------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred -----------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 0112344566778888888 599999999999863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0194|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=273.78 Aligned_cols=256 Identities=18% Similarity=0.214 Sum_probs=201.0
Q ss_pred cccccCCee--CCeEEEEEEecccCceEEEEEEeCCCCc---e-EEEEEEecc----cccchhhHHHHHHHHHhcccCCC
Q psy12288 18 CPVQIGDLF--NFRYHVIRKLGWGHFSTVWLSWDLQDKT---F-VALKIVKSD----QVYADTARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 18 ~~~~~~~~~--~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~-vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~ 87 (393)
.|+..+.|. .++-.+.++||+|+||.||+|.....+. . ||||..+.+ ......+-+|.++|+.+
T Consensus 145 ~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l------ 218 (474)
T KOG0194|consen 145 RPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL------ 218 (474)
T ss_pred ccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC------
Confidence 456666654 3556677999999999999998776533 3 899988742 23346678899999999
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
+|+||++++++.. ....+++|||+| +|+|.+++.+... .++..+...++.+.+.||+|||++ +++
T Consensus 219 --------~H~NVVr~yGVa~----~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k-~~I 284 (474)
T KOG0194|consen 219 --------NHPNVVRFYGVAV----LEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK-NCI 284 (474)
T ss_pred --------CCCCEEEEEEEEc----CCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC-CCc
Confidence 9999999999877 455689999999 8899999987653 589999999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC---C
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---D 243 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~---~ 243 (393)
||||-.+|+|++.++ .+|++|||+++....... .
T Consensus 285 HRDIAARNcL~~~~~-------------------------------------------~vKISDFGLs~~~~~~~~~~~~ 321 (474)
T KOG0194|consen 285 HRDIAARNCLYSKKG-------------------------------------------VVKISDFGLSRAGSQYVMKKFL 321 (474)
T ss_pred chhHhHHHheecCCC-------------------------------------------eEEeCccccccCCcceeecccc
Confidence 999999999998776 379999999875432111 1
Q ss_pred CCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc
Q psy12288 244 EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322 (393)
Q Consensus 244 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 322 (393)
..-+..|+|||.+....|+.++|||||||++||+++ |..||++... .+..+.+..- +.
T Consensus 322 ~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~------~~v~~kI~~~-~~-------------- 380 (474)
T KOG0194|consen 322 KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN------YEVKAKIVKN-GY-------------- 380 (474)
T ss_pred ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH------HHHHHHHHhc-Cc--------------
Confidence 124678999999999999999999999999999999 7889987662 2222222111 11
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+...+...+..+..++.+|+..||++|||+.++.+
T Consensus 381 -------------------------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 381 -------------------------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred -------------------------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 11123456677889999999999999999988764
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=257.37 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=176.9
Q ss_pred EEecccCceEEEEEEeCC--CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
+.||+|+||.||+|.... ++..+|+|.+..... ....+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~~~~- 65 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL--------------QHSNLLQCLGQCT- 65 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC--------------CCCCEeeEEEEEc-
Confidence 368999999999997543 456799998765432 224567899999998 8999999988776
Q ss_pred ecCCCeEEEEEEeec-cccHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 110 YSRNGTHICMVFEVM-GYNLLRLIARSD---YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~---~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.....++||||+ +++|.+.+.... ....+...+..++.|++.|++|||+. +++|+||||+||+++.++
T Consensus 66 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~---- 137 (269)
T cd05087 66 ---EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADL---- 137 (269)
T ss_pred ---CCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCC----
Confidence 456689999999 678888775432 12345677888999999999999998 999999999999997665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcC-
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~- 259 (393)
.++|+|||.+...... .....++..|+|||++.+.
T Consensus 138 ---------------------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (269)
T cd05087 138 ---------------------------------------TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVH 178 (269)
T ss_pred ---------------------------------------cEEECCccccccccCcceeecCCCcCCcccccCHhHhcccc
Confidence 4999999988643221 1123457789999998642
Q ss_pred ------CCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 260 ------GYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 260 ------~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
.++.++|+||||+++|+|++ |..||..... ......... +... ..
T Consensus 179 ~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------~~~~~~~~~--~~~~-----------~~--------- 230 (269)
T cd05087 179 GNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD------EQVLTYTVR--EQQL-----------KL--------- 230 (269)
T ss_pred ccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHHhh--cccC-----------CC---------
Confidence 35789999999999999996 9999965431 111111110 0000 00
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.........+..+.++|.+|+ .+|.+|||++||+.
T Consensus 231 --------------~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 231 --------------PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred --------------CCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000011234556789999998 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=256.86 Aligned_cols=241 Identities=20% Similarity=0.289 Sum_probs=178.2
Q ss_pred EEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+.||+|+||.||+|.+... ...||+|.+.... .....+.+|+.+++.+ .|+|++++++.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~ 66 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF--------------SHPNVLSLLGICL 66 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC--------------CCCCcceEEEEee
Confidence 3689999999999986543 4579999875322 2235667788888887 8899999888554
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
. .++..+++|||+ +++|.+++.... ...+...+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 67 ~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~------ 135 (262)
T cd05058 67 P---SEGSPLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESF------ 135 (262)
T ss_pred c---CCCCcEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCC------
Confidence 2 344578999999 788888876543 3356778888999999999999998 999999999999997765
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHHhcCC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||+++..... .....++..|+|||.+.+..
T Consensus 136 -------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (262)
T cd05058 136 -------------------------------------TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQK 178 (262)
T ss_pred -------------------------------------cEEECCccccccccCCcceeecccccCcCCccccChhHhccCc
Confidence 4999999998754321 11234567899999998888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++||||||+++|+|++ |.+||...+. ......+. .+..
T Consensus 179 ~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~~~~--~~~~------------------------------ 220 (262)
T cd05058 179 FTTKSDVWSFGVLLWELMTRGAPPYPDVDS------FDITVYLL--QGRR------------------------------ 220 (262)
T ss_pred cchHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHh--cCCC------------------------------
Confidence 9999999999999999999 5666653321 11111100 0000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..+|++||++.++++.
T Consensus 221 ---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 221 ---------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred ---------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 00112234578899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=257.66 Aligned_cols=249 Identities=18% Similarity=0.251 Sum_probs=185.9
Q ss_pred EEEEEEecccCceEEEEEEeCC---CCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
|++.++||+|+||.||+|.... ++..||||++..+. ...+.+.+|+.+++.+ .|+|++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~ 66 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF--------------DHPNVIKL 66 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC--------------CCCCcceE
Confidence 6778899999999999998653 57889999887532 2234567899999988 88999999
Q ss_pred cccceeecCCC--eEEEEEEeec-cccHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 104 LNDFKIYSRNG--THICMVFEVM-GYNLLRLIARS----DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 104 ~~~~~~~~~~~--~~~~iv~e~~-~~~l~~~~~~~----~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++.+......+ ...+++++|+ ++++...+... ....++...+..++.|++.||+|||+. |++|+||||+||+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nil 145 (273)
T cd05074 67 IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCM 145 (273)
T ss_pred EEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEE
Confidence 98775332222 2357888988 67777665422 112478889999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~ 251 (393)
++.+. .++++|||+++...... ....+++.|+
T Consensus 146 i~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
T cd05074 146 LNENM-------------------------------------------TVCVADFGLSKKIYSGDYYRQGCASKLPVKWL 182 (273)
T ss_pred EcCCC-------------------------------------------CEEECcccccccccCCcceecCCCccCchhhc
Confidence 97665 48999999987653221 1223457899
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
+||.+.+..++.++||||||+++|+|++ |+.||..... ......+.. +.
T Consensus 183 ~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~---------------------- 232 (273)
T cd05074 183 ALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN------SEIYNYLIK--GN---------------------- 232 (273)
T ss_pred CHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH------HHHHHHHHc--CC----------------------
Confidence 9999998889999999999999999999 8899864431 111111110 00
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..+|.+||++.+++++
T Consensus 233 -----------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 233 -----------------RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred -----------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001112345678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG4257|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=270.89 Aligned_cols=242 Identities=18% Similarity=0.275 Sum_probs=198.5
Q ss_pred EEEEEEecccCceEEEEEEeCCC--Cc--eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQD--KT--FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~--~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
-++.+.||.|-||.||.|..... |+ -||||..+.+ ....+.+..|..+|+.+ +||||+++
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf--------------dHphIikL 456 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF--------------DHPHIIKL 456 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC--------------CCcchhhe
Confidence 34567899999999999976544 22 4999998864 44578899999999999 99999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++++. ....|||||.+ -|.|..++...+ .+++......++.||+.||+|||+. +.|||||-.+|||+..+.
T Consensus 457 IGv~~-----e~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~- 528 (974)
T KOG4257|consen 457 IGVCV-----EQPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQ- 528 (974)
T ss_pred eeeee-----ccceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcc-
Confidence 99996 44599999999 788888887654 4588899999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----CCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----DEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~t~~y~aPE~~~~ 258 (393)
++||+|||+++....... ...-+.-|||||.+.-
T Consensus 529 ------------------------------------------CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf 566 (974)
T KOG4257|consen 529 ------------------------------------------CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF 566 (974)
T ss_pred ------------------------------------------eeeecccchhhhccccchhhccccccceeecCccccch
Confidence 699999999998764422 2233667999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.+++.++|||.|||.+||++. |.-||.+....+.. |.+ .+
T Consensus 567 RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-------------~~i--------En------------------ 607 (974)
T KOG4257|consen 567 RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-------------GHI--------EN------------------ 607 (974)
T ss_pred hcccchhhHHHHHHHHHHHHHhcCCccccccccceE-------------EEe--------cC------------------
Confidence 999999999999999999987 99999877644321 110 00
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.++.+.|..+++.+..|+.+||.+||.+||++.|+..
T Consensus 608 --------GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 608 --------GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred --------CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 1234567889999999999999999999999988753
|
|
| >KOG4278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=269.16 Aligned_cols=244 Identities=19% Similarity=0.276 Sum_probs=205.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
+-.+..+||-|.||.||.|.++.-.-.||||.++.+....+.|..|..+|+.+ .|+|++++++++.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei--------------kHpNLVqLLGVCT 333 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------------KHPNLVQLLGVCT 333 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh--------------cCccHHHHhhhhc
Confidence 45567899999999999999998888899999999999999999999999999 8999999999998
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
....+|||+||| .|+|++++.+.+..-++.-....++.||..|++||..+ +.+||||-.+|.|+..+.
T Consensus 334 ----~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEnh------ 402 (1157)
T KOG4278|consen 334 ----HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENH------ 402 (1157)
T ss_pred ----cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhccccccc------
Confidence 555699999999 89999999988766677778889999999999999998 999999999999998776
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCC---CCCCchhHHHhcCCCCc
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQ---TRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~---t~~y~aPE~~~~~~~~~ 263 (393)
.+|+.|||+++.+... .....| +.-|.|||.+.-+.++.
T Consensus 403 -------------------------------------iVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSi 445 (1157)
T KOG4278|consen 403 -------------------------------------IVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 445 (1157)
T ss_pred -------------------------------------eEEeeccchhhhhcCCceecccCccCcccccCccccccccccc
Confidence 5999999999977433 222333 56799999999999999
Q ss_pred hhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++|||+|||++||+.| |-.||++.. +...+.++ .+.+++-
T Consensus 446 KSDVWAFGVLLWEIATYGMsPYPGid----------lSqVY~LL-----------EkgyRM~------------------ 486 (1157)
T KOG4278|consen 446 KSDVWAFGVLLWEIATYGMSPYPGID----------LSQVYGLL-----------EKGYRMD------------------ 486 (1157)
T ss_pred chhhHHHHHHHHHHHhcCCCCCCCcc----------HHHHHHHH-----------hcccccc------------------
Confidence 9999999999999999 889997654 11222211 1122221
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
-+.++++.+.+||+.||+|.|.+||++.|+-
T Consensus 487 --------~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 487 --------GPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred --------CCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 2367888999999999999999999998864
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=250.86 Aligned_cols=243 Identities=16% Similarity=0.236 Sum_probs=175.0
Q ss_pred EecccCceEEEEEEeCCC--CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 35 KLGWGHFSTVWLSWDLQD--KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
.||+|+||.||+|....+ ...+++|.+.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l--------------~h~~iv~~~~~~~-- 65 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL--------------QHPNILQCLGQCV-- 65 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc--------------CCcchhheEEEec--
Confidence 589999999999975443 2346677665432 2345677888888877 8999999999887
Q ss_pred cCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 111 SRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 111 ~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.....++||||+ +++|.+++.... ...+....+..++.|++.||+|||+. +++|+||||+||+++.++
T Consensus 66 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~------ 136 (268)
T cd05086 66 --EAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDL------ 136 (268)
T ss_pred --CCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCc------
Confidence 556789999999 678888876532 12356677889999999999999998 999999999999997665
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHhc----
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLIG---- 258 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~---- 258 (393)
.++|+|||++..... ......++..|+|||++..
T Consensus 137 -------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 179 (268)
T cd05086 137 -------------------------------------TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGG 179 (268)
T ss_pred -------------------------------------cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCc
Confidence 499999998754211 1223456889999999853
Q ss_pred ---CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 259 ---AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 259 ---~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
..++.++||||||+++|+|++ |..||...+ ..+.+..+..-... ..+.
T Consensus 180 ~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~-------------~~~~--------- 231 (268)
T cd05086 180 LITAEQTKPSNVWALGVTLWELFENAAQPYSHLS------DREVLNHVIKDQQV-------------KLFK--------- 231 (268)
T ss_pred cccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhhccc-------------ccCC---------
Confidence 235789999999999999997 567875433 22222222110000 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+....+..+.+++..|| .+|.+||+++++++
T Consensus 232 --------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 232 --------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred --------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0112234567788999999 68999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG2052|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=252.68 Aligned_cols=266 Identities=22% Similarity=0.243 Sum_probs=208.3
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
.|+-.|+-++.+++.+-++.+.||+|.||.||+|.++ |+.||||++... ......+|.++.+.+.
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr--dE~SWfrEtEIYqTvm----------- 261 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR--DERSWFRETEIYQTVM----------- 261 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEeccc--chhhhhhHHHHHHHHH-----------
Confidence 5777889999999999999999999999999999774 889999999864 3577889999988873
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------Ce
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC-------RI 165 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~-------~i 165 (393)
..|+||+.+++.-......-.++|+|++|- .|+|++++.+. +++.+...+++..++.||++||... .|
T Consensus 262 -LRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaI 337 (513)
T KOG2052|consen 262 -LRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAI 337 (513)
T ss_pred -hccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchh
Confidence 289999999998876666678999999998 89999999874 4899999999999999999999743 49
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------ 239 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------ 239 (393)
.|||||..||||..|+ ++-++|+|+|.....
T Consensus 338 AHRDlKSKNILVKkn~-------------------------------------------~C~IADLGLAv~h~~~t~~id 374 (513)
T KOG2052|consen 338 AHRDLKSKNILVKKNG-------------------------------------------TCCIADLGLAVRHDSDTDTID 374 (513)
T ss_pred hccccccccEEEccCC-------------------------------------------cEEEeeceeeEEecccCCccc
Confidence 9999999999998877 489999999876532
Q ss_pred -CCCCCCCCCCCchhHHHhcCC------CCchhhHHhHHHHHHHHHhC----------CCCCCCCCCCCCCCcHHHHHHH
Q psy12288 240 -HFADEIQTRQYRSVEVLIGAG------YGPAADIWSTACMAFELATG----------DYLFDPKAGKEYSRDDDHLAHI 302 (393)
Q Consensus 240 -~~~~~~~t~~y~aPE~~~~~~------~~~~~DiwSlG~~l~ell~g----------~~pf~~~~~~~~~~~~~~~~~~ 302 (393)
.....+||..|||||++...- .-..+||||||.++||++.. .+||.+..+.+.. .+.+...
T Consensus 375 i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs--~eeMrkV 452 (513)
T KOG2052|consen 375 IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS--FEEMRKV 452 (513)
T ss_pred CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC--HHHHhcc
Confidence 345679999999999997642 13469999999999999764 4577655443321 1111111
Q ss_pred HH---HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHH
Q psy12288 303 VE---LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379 (393)
Q Consensus 303 ~~---~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 379 (393)
+- ++..+|.. | .+.+.-..+.++|+.||..||.-|.||-.
T Consensus 453 VCv~~~RP~ipnr--------------------------W-----------~s~~~l~~m~klMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 453 VCVQKLRPNIPNR--------------------------W-----------KSDPALRVMAKLMKECWYANPAARLTALR 495 (513)
T ss_pred eeecccCCCCCcc--------------------------c-----------ccCHHHHHHHHHHHHhhcCCchhhhHHHH
Confidence 11 11111111 1 12455677889999999999999999854
Q ss_pred H
Q psy12288 380 C 380 (393)
Q Consensus 380 l 380 (393)
+
T Consensus 496 i 496 (513)
T KOG2052|consen 496 I 496 (513)
T ss_pred H
Confidence 4
|
|
| >KOG0199|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=269.62 Aligned_cols=246 Identities=20% Similarity=0.225 Sum_probs=202.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC-Cc--eEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD-KT--FVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~--~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++-++.++||+|.||+|++|.+... |+ .||||.+..... ....|.+|+.+|..+ .|+|+++
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L--------------~H~hliR 175 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL--------------QHPHLIR 175 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc--------------cCcceeE
Confidence 4667889999999999999987764 33 589999875432 467899999999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++++.. +...-+|||++ .|+|++.+.+.....|.....+.++.||+.|+.||-.+ ++|||||-.+|+++....
T Consensus 176 LyGvVl-----~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllaspr 249 (1039)
T KOG0199|consen 176 LYGVVL-----DQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPR 249 (1039)
T ss_pred Eeeeec-----cchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccc
Confidence 999886 24467999999 89999998876666789999999999999999999999 999999999999996543
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCC------CCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI------QTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~------~t~~y~aPE~ 255 (393)
.+|++|||+.+.++.....++ -...|.|||.
T Consensus 250 -------------------------------------------tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEs 286 (1039)
T KOG0199|consen 250 -------------------------------------------TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPES 286 (1039)
T ss_pred -------------------------------------------eeeeecccceeccCCCCcceEecCCCcCcccccCHhH
Confidence 599999999998876544332 2457999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+....++.++|+|++||++|||++ |+-||.+.. ....+..+.+
T Consensus 287 Lrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~------g~qIL~~iD~------------------------------ 330 (1039)
T KOG0199|consen 287 LRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR------GIQILKNIDA------------------------------ 330 (1039)
T ss_pred hccccccccchhhhhhhhHHhhhccCCCCCCCCC------HHHHHHhccc------------------------------
Confidence 999999999999999999999999 899998776 2223332221
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.++++-+..++..+++++.+||..+|++|||+..|.+.
T Consensus 331 -----------~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 331 -----------GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred -----------cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 12223346789999999999999999999999988754
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=265.48 Aligned_cols=277 Identities=21% Similarity=0.252 Sum_probs=181.2
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCC----------------CCceEEEEEEecccc-cc--------------hhhHH
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQ----------------DKTFVALKIVKSDQV-YA--------------DTARD 73 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~~-~~--------------~~~~~ 73 (393)
+-.++|++.++||+|+||.||+|.... .++.||||.+..... .. +....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 346799999999999999999997532 345799998864321 11 22233
Q ss_pred HHHHHHHhcccCCCCcccccCcccccceeccccceeecC----CCeEEEEEEeec-cccHHHHHHhcC------------
Q psy12288 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR----NGTHICMVFEVM-GYNLLRLIARSD------------ 136 (393)
Q Consensus 74 E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~iv~e~~-~~~l~~~~~~~~------------ 136 (393)
|+.++..+.+.+. .+.+++++++.+..... ..+..++||||+ +++|.+++....
T Consensus 222 E~~~l~~l~~~~l---------~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~ 292 (507)
T PLN03224 222 EAYMCAKIKRNPI---------AAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMM 292 (507)
T ss_pred HHHHHHHhhcccc---------hhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHh
Confidence 5556666644332 23445566665543211 234689999999 778877765321
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCC
Q psy12288 137 ----------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206 (393)
Q Consensus 137 ----------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (393)
...++...++.++.|++.||.|||+. +++||||||+||+++.++
T Consensus 293 ~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~------------------------- 346 (507)
T PLN03224 293 AGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDG------------------------- 346 (507)
T ss_pred cCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCC-------------------------
Confidence 01234567888999999999999998 999999999999998765
Q ss_pred CCCCCCCCCCCCcccccceEEEeecCccccccCC--C--CCCCCCCCCchhHHHhcCC--------------------C-
Q psy12288 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDH--F--ADEIQTRQYRSVEVLIGAG--------------------Y- 261 (393)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~--~~~~~t~~y~aPE~~~~~~--------------------~- 261 (393)
.++|+|||++...... . ....+|+.|++||.+.... +
T Consensus 347 ------------------~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg 408 (507)
T PLN03224 347 ------------------QVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYG 408 (507)
T ss_pred ------------------cEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcC
Confidence 4999999998654321 1 1223478999999986432 1
Q ss_pred -CchhhHHhHHHHHHHHHhCCC-CCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 262 -GPAADIWSTACMAFELATGDY-LFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 262 -~~~~DiwSlG~~l~ell~g~~-pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
....|+||+||++++|+++.. ||....... .........-.. +..
T Consensus 409 ~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~---------~~~~~~~~~~~~-~r~----------------------- 455 (507)
T PLN03224 409 RPDLFDSYTAGVLLMQMCVPELRPVANIRLFN---------TELRQYDNDLNR-WRM----------------------- 455 (507)
T ss_pred CCCccchhhHHHHHHHHHhCCCCCccchhhhh---------hHHhhccchHHH-HHh-----------------------
Confidence 234799999999999999875 664322100 000000000000 000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCC---CCCcCHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQ---KLRASAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP---~~Rpt~~ell~hp~~~~~ 389 (393)
.......+...+..+....||+.+||+.+| .+|+|++|+|+||||...
T Consensus 456 --~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~ 506 (507)
T PLN03224 456 --YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE 506 (507)
T ss_pred --hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence 000001111224567888999999999876 689999999999999764
|
|
| >KOG0695|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=245.46 Aligned_cols=257 Identities=22% Similarity=0.345 Sum_probs=207.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch----hhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|+++++||+|+|+.|-+++...|.+.+|+|++++.-...+ =++.|-.+....+ ++|.++-+
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-------------n~pflvgl 316 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-------------NNPFLVGL 316 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-------------CCCeEEeh
Confidence 589999999999999999999999999999999886433222 2344555554442 78889999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
..+|+ ....++.|.||. ||+|--.+... ..++++.++.+...|+.||.|||++ ||+.||||.+|+|++..+
T Consensus 317 hscfq----tesrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeg- 388 (593)
T KOG0695|consen 317 HSCFQ----TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEG- 388 (593)
T ss_pred hhhhc----ccceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCC-
Confidence 99998 667799999999 78877777665 3499999999999999999999999 999999999999999887
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|+|.++.- +...++.+||+.|.|||++.+.
T Consensus 389 ------------------------------------------hikltdygmcke~l~~gd~tstfcgtpnyiapeilrge 426 (593)
T KOG0695|consen 389 ------------------------------------------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE 426 (593)
T ss_pred ------------------------------------------ceeecccchhhcCCCCCcccccccCCCcccchhhhccc
Confidence 4999999988643 3456678999999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCC--CCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKE--YSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.|+.++|.|+|||+++||+.|+.||....-.. .-.+.
T Consensus 427 eygfsvdwwalgvlmfemmagrspfdivgm~n~d~nted----------------------------------------- 465 (593)
T KOG0695|consen 427 EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTED----------------------------------------- 465 (593)
T ss_pred ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhH-----------------------------------------
Confidence 99999999999999999999999996432111 10011
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC------HHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS------AADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~ell~hp~~~~~ 389 (393)
.-.+.++..-+..|...+..+..+++..|+.||.+|.. +.++-.|+||+.+
T Consensus 466 -ylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 466 -YLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred -HHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 11233444445556666777788999999999999975 6899999999865
|
|
| >KOG0196|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=271.52 Aligned_cols=245 Identities=17% Similarity=0.267 Sum_probs=203.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.-+|.++||.|.||.|++|+.+..++ .||||.++.. ......|..|..+|-++ +||||+++
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF--------------dHPNIIrL 695 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF--------------DHPNIIRL 695 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC--------------CCCcEEEE
Confidence 45688899999999999999887764 5999999854 33455678899999988 99999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.++.. ....+-||+||| +|+|-.++.... +.|+..+...+.+.|+.|++||-+. ++|||||-.+|||++.+-
T Consensus 696 EGVVT----ks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNsnL- 768 (996)
T KOG0196|consen 696 EGVVT----KSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNSNL- 768 (996)
T ss_pred EEEEe----cCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeeccce-
Confidence 99987 666788999999 777777776655 4499999999999999999999997 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCC------CCCCCCchhHHH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE------IQTRQYRSVEVL 256 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~------~~t~~y~aPE~~ 256 (393)
.+|++|||+++.+.+..... --+..|.|||.+
T Consensus 769 ------------------------------------------vCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAI 806 (996)
T KOG0196|consen 769 ------------------------------------------VCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAI 806 (996)
T ss_pred ------------------------------------------EEEeccccceeecccCCCccccccCCccceeecChhHh
Confidence 59999999999774332211 124679999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.-..++.++||||+|++|||.++ |+.|+.+.+ ..+.+..+.+-...+|
T Consensus 807 a~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS------NQdVIkaIe~gyRLPp------------------------- 855 (996)
T KOG0196|consen 807 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------NQDVIKAIEQGYRLPP------------------------- 855 (996)
T ss_pred hhcccCchhhccccceEEEEecccCCCcccccc------hHHHHHHHHhccCCCC-------------------------
Confidence 99999999999999999999887 999999887 4555555555333322
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
|-+++..+.+||..||+.|-..||++.||+.+
T Consensus 856 ----------------PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 856 ----------------PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ----------------CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 35788999999999999999999999999865
|
|
| >KOG1151|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=261.11 Aligned_cols=264 Identities=25% Similarity=0.390 Sum_probs=200.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--------chhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--------ADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
+++++|-++..||+|||+.||+|++....+.||+|+-..+... ....-+|..+.+.+ +
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL--------------D 525 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL--------------D 525 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc--------------C
Confidence 4678999999999999999999999999999999986543222 23345677788887 9
Q ss_pred cccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-CeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC-RIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~-~i~H~dlkp~NI 175 (393)
|+.||++++.|.+ +...+|-|+|||.|+-+++..+.. ..+++.+++.|+.||+.||.||.+.. .|+|-||||.||
T Consensus 526 HpRIVKlYDyfsl---DtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNI 601 (775)
T KOG1151|consen 526 HPRIVKLYDYFSL---DTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNI 601 (775)
T ss_pred cceeeeeeeeeee---ccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccE
Confidence 9999999999974 556789999999666666655543 44899999999999999999999852 499999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEI 245 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~ 245 (393)
|+-.... .+-+|++|||++..+... .+...
T Consensus 602 LLv~Gta----------------------------------------cGeIKITDFGLSKIMdddSy~~vdGmeLTSQgA 641 (775)
T KOG1151|consen 602 LLVNGTA----------------------------------------CGEIKITDFGLSKIMDDDSYNSVDGMELTSQGA 641 (775)
T ss_pred EEecCcc----------------------------------------cceeEeeecchhhhccCCccCcccceeeecccC
Confidence 9843321 224999999999876432 22347
Q ss_pred CCCCCchhHHHhcC----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 246 QTRQYRSVEVLIGA----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 246 ~t~~y~aPE~~~~~----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
||.+|.+||.+.-. ..+.++||||+|||||.++-|+-||...... .+.+..--. +.
T Consensus 642 GTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-----QdILqeNTI-lk-------------- 701 (775)
T KOG1151|consen 642 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-----QDILQENTI-LK-------------- 701 (775)
T ss_pred ceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH-----HHHHhhhch-hc--------------
Confidence 89999999998654 2588999999999999999999999543211 111110000 00
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+. .+ -++--.-++.++.+||++||.+.-++|..+.++..||||..
T Consensus 702 --------------At-----EV---qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 702 --------------AT-----EV---QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred --------------ce-----ec---cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 00 00 00111345678889999999999999999999999999975
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=238.85 Aligned_cols=239 Identities=29% Similarity=0.499 Sum_probs=189.0
Q ss_pred CceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEE
Q psy12288 40 HFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI 117 (393)
Q Consensus 40 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 117 (393)
+||.||+|.+..+++.+++|++...... .+.+.+|+..++.+ .|++++++.+.+. .....
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~~~~----~~~~~ 62 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL--------------KHPNIVRLYDVFE----DEDKL 62 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC--------------CCCcHHHHHhhee----eCCEE
Confidence 5899999999988999999998754322 47788999999998 7889999988887 45779
Q ss_pred EEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccc
Q psy12288 118 CMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196 (393)
Q Consensus 118 ~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~ 196 (393)
++++|++++ +|...+.... .++...+..++.+++.++.+||+. +++|+||+|+||+++.++
T Consensus 63 ~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~--------------- 124 (244)
T smart00220 63 YLVMEYCDGGDLFDLLKKRG--RLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDG--------------- 124 (244)
T ss_pred EEEEeCCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCC---------------
Confidence 999999954 8888876543 278899999999999999999998 999999999999998765
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHH
Q psy12288 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMA 274 (393)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l 274 (393)
.++++|||.+..... ......++..|++||...+..++.++|+||||+++
T Consensus 125 ----------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l 176 (244)
T smart00220 125 ----------------------------HVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVIL 176 (244)
T ss_pred ----------------------------cEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHH
Confidence 499999999876644 34455678899999999988889999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChh
Q psy12288 275 FELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKA 354 (393)
Q Consensus 275 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (393)
+++++|..||.... .. ..+........... ......
T Consensus 177 ~~l~~~~~p~~~~~------~~---~~~~~~~~~~~~~~-----------------------------------~~~~~~ 212 (244)
T smart00220 177 YELLTGKPPFPGDD------QL---LELFKKIGKPKPPF-----------------------------------PPPEWK 212 (244)
T ss_pred HHHHhCCCCCCCCC------cH---HHHHHHHhccCCCC-----------------------------------cccccc
Confidence 99999999996432 11 11111111000000 000011
Q ss_pred hHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 355 EASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 355 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+..+.+++.+||..+|.+||++.++++||||
T Consensus 213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 213 ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 55688899999999999999999999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1027|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-33 Score=272.83 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=188.7
Q ss_pred EEEEecccCce-EEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 32 VIRKLGWGHFS-TVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 32 ~~~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
-.+++|.|+.| .||+|.. .++.||||.+-.+. ....++|+..|+.-. .|+||++.++.=.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~--~~~A~rEi~lL~eSD-------------~H~NviRyyc~E~-- 573 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF--FDFAQREIQLLQESD-------------EHPNVIRYYCSEQ-- 573 (903)
T ss_pred cHHHcccCCCCcEEEEEee--CCceehHHHHhhHh--HHHHHHHHHHHHhcc-------------CCCceEEEEeecc--
Confidence 34578899887 5899955 57799999876532 456789999999873 8999999887655
Q ss_pred cCCCeEEEEEEeeccccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhh
Q psy12288 111 SRNGTHICMVFEVMGYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~ 188 (393)
+..+.||..|.|..+|.+++... ..........+.++.|+++||++||+- +||||||||.|||++....
T Consensus 574 --d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~------ 644 (903)
T KOG1027|consen 574 --DRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSA------ 644 (903)
T ss_pred --CCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCC------
Confidence 78899999999999999999763 111112244578899999999999984 9999999999999976431
Q ss_pred hhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhcCCCC
Q psy12288 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
....+++|+|||++..+... .....||-+|+|||++....-+
T Consensus 645 --------------------------------~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~ 692 (903)
T KOG1027|consen 645 --------------------------------DGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKT 692 (903)
T ss_pred --------------------------------CcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccC
Confidence 11347999999999887532 3445789999999999998888
Q ss_pred chhhHHhHHHHHHHHHhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELATG-DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++||+||||++|..++| ..||.+.-.. ....+.....
T Consensus 693 ~avDiFslGCvfyYvltgG~HpFGd~~~R----~~NIl~~~~~------------------------------------- 731 (903)
T KOG1027|consen 693 QAVDIFSLGCVFYYVLTGGSHPFGDSLER----QANILTGNYT------------------------------------- 731 (903)
T ss_pred cccchhhcCceEEEEecCCccCCCchHHh----hhhhhcCccc-------------------------------------
Confidence 999999999999999885 8999543211 1111110000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...+.......+.+||.+|++.+|..||+|.++|.||+|=+
T Consensus 732 ------L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 732 ------LVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred ------eeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 01111122227789999999999999999999999999954
|
|
| >KOG1006|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-33 Score=241.38 Aligned_cols=258 Identities=20% Similarity=0.306 Sum_probs=199.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+-+-+..||.|+||.|++-.++.+|+..|||.+..+. ....++..|.....+- ..+++|+++++.
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks-------------~~cp~IVkfyGa 131 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS-------------SNCPNIVKFYGA 131 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh-------------cCCcHHHHHhhh
Confidence 3444678999999999999999999999999987543 3345566777654443 289999999999
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIAR---SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~---~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.. +.+-.||.||+|..++-.+... -....+++..+-.|......||.||-+...|+|||+||+|||++..+
T Consensus 132 ~F----~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-- 205 (361)
T KOG1006|consen 132 LF----SEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-- 205 (361)
T ss_pred hh----cCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--
Confidence 87 5666999999997766544321 11234788888888888899999999988999999999999998877
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC--
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA-- 259 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~-- 259 (393)
.+||||||.+-.+..+ .+..+|-..|||||.+...
T Consensus 206 -----------------------------------------~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~ 244 (361)
T KOG1006|consen 206 -----------------------------------------DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDK 244 (361)
T ss_pred -----------------------------------------CEeeecccchHhHHHHHHhhhccCCccccChhccCCccC
Confidence 4999999998766543 3455778899999998753
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
+|.-.+|+||||+++||++||..|++..+. .+.++-. +.|.+|.-....
T Consensus 245 gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--------vfeql~~Vv~gdpp~l~~~~---------------------- 294 (361)
T KOG1006|consen 245 GYDIRSDVWSLGITLYEVATGNFPYRKWDS--------VFEQLCQVVIGDPPILLFDK---------------------- 294 (361)
T ss_pred CcchhhhhhhhcceEeeeecCCCCcchHHH--------HHHHHHHHHcCCCCeecCcc----------------------
Confidence 588999999999999999999999976542 3333333 334443311100
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
-.-..+..+.+||.-||..|-.+||...+++++||++.
T Consensus 295 ------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 295 ------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred ------------cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 00235678899999999999999999999999999874
|
|
| >KOG1094|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-32 Score=256.41 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=198.7
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.-.++-.++++||+|-||.|-+|+-. .+..||+|+++.... .+..+.+|+.+|.++ .||||+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL--------------khPNIv 598 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRL--------------KHPNIV 598 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhcc--------------CCCCee
Confidence 344567789999999999999999654 368899999985432 246789999999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++++. .+..+++|+||+ .|+|..++.+........+...+|+.||+.|++||-+- ++||||+-++|+|++.+
T Consensus 599 eLvGVC~----~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e 673 (807)
T KOG1094|consen 599 ELLGVCV----QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGE 673 (807)
T ss_pred EEEeeee----cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCc
Confidence 9999988 566799999999 89999999887544445556677999999999999985 99999999999999988
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-----CCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-----DEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~t~~y~aPE~ 255 (393)
. ++|++|||.++.+-.-.. ..+.+..|||+|.
T Consensus 674 ~-------------------------------------------~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEs 710 (807)
T KOG1094|consen 674 F-------------------------------------------TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWES 710 (807)
T ss_pred c-------------------------------------------cEEecCcccccccccCCceeeecceeeeeeehhHHH
Confidence 7 499999999986532222 2245789999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHH--hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 256 LIGAGYGPAADIWSTACMAFELA--TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell--~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+..+++++++|+|+||+++||++ +.+-||...+. ..+.+..|.+ +...+.
T Consensus 711 illgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~----------e~vven~~~~--------------~~~~~~---- 762 (807)
T KOG1094|consen 711 ILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD----------EQVVENAGEF--------------FRDQGR---- 762 (807)
T ss_pred HHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH----------HHHHHhhhhh--------------cCCCCc----
Confidence 99999999999999999999984 57788854441 1222222211 000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+....-|.-++..++++|.+||..|-++||+++++..+
T Consensus 763 ------------~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 763 ------------QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred ------------ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 00111234566788899999999999999999998654
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=281.81 Aligned_cols=253 Identities=14% Similarity=0.178 Sum_probs=181.8
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
.|+..++||+|+||.||+|.+..++..||+|.+.... .....|+..++.+ .|+||+++++.+.
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~l~~l--------------~HpnIv~~~~~~~ 753 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN---SIPSSEIADMGKL--------------QHPNIVKLIGLCR 753 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc---cccHHHHHHHhhC--------------CCCCcceEEEEEE
Confidence 5667789999999999999999999999999886432 2234567788877 8999999999987
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh---hcCCeeeccCCCCceEEeechhHH
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLH---TQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH---~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.....++||||+ +++|.+.+.. +++..+..++.|++.|++||| +. +++||||||+||+++.+..
T Consensus 754 ----~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~-- 821 (968)
T PLN00113 754 ----SEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDE-- 821 (968)
T ss_pred ----cCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCc--
Confidence 456689999999 7888888742 778899999999999999999 55 8999999999999976652
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.++. ++....... .....+|..|+|||++.+..++.+
T Consensus 822 -----------------------------------------~~~~-~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~ 858 (968)
T PLN00113 822 -----------------------------------------PHLR-LSLPGLLCT-DTKCFISSAYVAPETRETKDITEK 858 (968)
T ss_pred -----------------------------------------eEEE-ecccccccc-CCCccccccccCcccccCCCCCcc
Confidence 3332 443322111 123367899999999998889999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+|||||||++|||++|+.||........ ...... ......... ....+ ..
T Consensus 859 sDv~S~Gvvl~el~tg~~p~~~~~~~~~--~~~~~~--~~~~~~~~~---------~~~~~-----------------~~ 908 (968)
T PLN00113 859 SDIYGFGLILIELLTGKSPADAEFGVHG--SIVEWA--RYCYSDCHL---------DMWID-----------------PS 908 (968)
T ss_pred cchhhHHHHHHHHHhCCCCCCcccCCCC--cHHHHH--HHhcCccch---------hheeC-----------------cc
Confidence 9999999999999999999954322110 000000 000000000 00000 00
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.........+...+.+++.+||..||++|||++|+++.
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 001111223455678899999999999999999999875
|
|
| >KOG3653|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=240.80 Aligned_cols=197 Identities=24% Similarity=0.345 Sum_probs=162.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
..-++.+.+|+|+||.||+|.. +++.||||++... ..+.+..|-++..... ..|+||+++++.-
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~------------m~h~nIl~Fi~~e 273 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ--EKQSFQNEKNIYSLPG------------MKHENILQFIGAE 273 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHH--HHHHHHhHHHHHhccC------------ccchhHHHhhchh
Confidence 4567789999999999999954 5689999999853 3577888877776652 3899999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------CeeeccCCCCceEEe
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC--------RIIHTDIKPENILMC 178 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~--------~i~H~dlkp~NIl~~ 178 (393)
.........+++|++|- .|+|.+++... ..++.+.++++..++.||+|||+.. .|+|||||..|||+.
T Consensus 274 kr~t~~~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK 350 (534)
T KOG3653|consen 274 KRGTADRMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK 350 (534)
T ss_pred ccCCccccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc
Confidence 64443455899999998 89999999775 3899999999999999999999853 499999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchh
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSV 253 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aP 253 (393)
.|. +..|+|||+|..+.. .....+||..||||
T Consensus 351 ~Dl-------------------------------------------TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAP 387 (534)
T KOG3653|consen 351 NDL-------------------------------------------TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAP 387 (534)
T ss_pred cCC-------------------------------------------cEEeeccceeEEecCCCCCcchhhhhhhhhhcCH
Confidence 887 589999999987642 23346899999999
Q ss_pred HHHhcCC-CC-----chhhHHhHHHHHHHHHhCCCCCCC
Q psy12288 254 EVLIGAG-YG-----PAADIWSTACMAFELATGDYLFDP 286 (393)
Q Consensus 254 E~~~~~~-~~-----~~~DiwSlG~~l~ell~g~~pf~~ 286 (393)
|++.+.. +. ...||||+|.++|||+++..-+..
T Consensus 388 EvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~ 426 (534)
T KOG3653|consen 388 EVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP 426 (534)
T ss_pred HHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 9998863 22 468999999999999998766543
|
|
| >KOG1345|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=227.47 Aligned_cols=256 Identities=20% Similarity=0.252 Sum_probs=191.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.+.|.+.+.||+|.||.+-+|+|+.+++.+++|.+.........+.+|...--.+ ..|.||+.-++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~L-------------s~H~hIi~tY~ 88 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFL-------------SPHQHIIDTYE 88 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceee-------------ccchhhhHHHH
Confidence 45789999999999999999999999999999999887666667777776544444 35677655544
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.-. ...++++.++||+ .|+|..-+.. .++.+....+++.|+++|+.|||+. ++||||||.+|||+.....
T Consensus 89 vaF---qt~d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df-- 159 (378)
T KOG1345|consen 89 VAF---QTSDAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADF-- 159 (378)
T ss_pred HHh---hcCceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCc--
Confidence 332 3566899999999 7888776654 3488889999999999999999999 9999999999999854431
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCC----
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG---- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~---- 260 (393)
-++||||||..+..+......-.+..|-+||++...+
T Consensus 160 ---------------------------------------~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~ 200 (378)
T KOG1345|consen 160 ---------------------------------------YRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKL 200 (378)
T ss_pred ---------------------------------------cEEEeeecccccccCceehhhhhhcccCCcHHHhhccccce
Confidence 1699999999887776555555677889999987542
Q ss_pred -CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhC----CCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 261 -YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG----PIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 261 -~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g----~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
..+.+|+|.||+++|.+++|.+||+.++.++.. ..+-+...+ ..|..+
T Consensus 201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~-----Y~~~~~w~~rk~~~~P~~F---------------------- 253 (378)
T KOG1345|consen 201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP-----YWEWEQWLKRKNPALPKKF---------------------- 253 (378)
T ss_pred EecccccchheeeeeeeeecCCCcchhhhccCch-----HHHHHHHhcccCccCchhh----------------------
Confidence 478899999999999999999999855543211 111111111 111111
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCC---cCHHHHhcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR---ASAADCLRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~ell~hp~~ 386 (393)
...++.+.++.++-|..+|++| .++......-|.
T Consensus 254 -----------------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 254 -----------------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred -----------------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 2456778899999999999999 566555544443
|
|
| >KOG1152|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=242.95 Aligned_cols=196 Identities=27% Similarity=0.468 Sum_probs=173.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.|..+..+|+|+||.|++|.++.....|+||++.++.. ....+..|+++|..+..+ .|+|
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~-----------sH~N 630 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH-----------SHEN 630 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc-----------Cccc
Confidence 59999999999999999999999999999999876432 234556799999999433 6999
Q ss_pred ceeccccceeecCCCeEEEEEEeec--cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM--GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~--~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
|+++++.|+ ++++++++||.- +-+|++++.... .+.+.++..|+.|+..|++.||++ ||+|||||-+|+++
T Consensus 631 IlKlLdfFE----ddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenviv 703 (772)
T KOG1152|consen 631 ILKLLDFFE----DDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIV 703 (772)
T ss_pred hhhhhheee----cCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhcccccccc-CceecccccccEEE
Confidence 999999998 888999999976 679999998764 499999999999999999999999 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc-cCCCCCCCCCCCCchhHHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI-DDHFADEIQTRQYRSVEVL 256 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~t~~y~aPE~~ 256 (393)
+.++ .+||+|||.+... ..+....+||..|.|||++
T Consensus 704 d~~g-------------------------------------------~~klidfgsaa~~ksgpfd~f~gtv~~aapevl 740 (772)
T KOG1152|consen 704 DSNG-------------------------------------------FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVL 740 (772)
T ss_pred ecCC-------------------------------------------eEEEeeccchhhhcCCCcceeeeeccccchhhh
Confidence 8887 5999999987643 4556677899999999999
Q ss_pred hcCCC-CchhhHHhHHHHHHHHHhCCCCCC
Q psy12288 257 IGAGY-GPAADIWSTACMAFELATGDYLFD 285 (393)
Q Consensus 257 ~~~~~-~~~~DiwSlG~~l~ell~g~~pf~ 285 (393)
.+.+| +..-|||+||+++|-++..+.||.
T Consensus 741 ~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 741 GGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99987 788999999999999999998885
|
|
| >KOG0200|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=252.83 Aligned_cols=248 Identities=19% Similarity=0.288 Sum_probs=193.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-------CCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
++.++.+.||+|+||.|++|.-.. ....||||+++.... ..+.+..|+.+|+.++ .|+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-------------~H~ 362 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-------------KHP 362 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-------------CCc
Confidence 344677799999999999997432 134699999885433 3567789999999995 799
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------C--------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------Y--------KGIHIQNVRTIIKQVLEGLNYLHTQC 163 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------~--------~~l~~~~~~~i~~ql~~~l~~lH~~~ 163 (393)
|++.+++.+. ..+.+++|+||+ .|+|.+++.... . ..++......++.||+.|++||++.
T Consensus 363 niv~llG~~t----~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~- 437 (609)
T KOG0200|consen 363 NIVNLLGACT----QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV- 437 (609)
T ss_pred chhhheeeec----cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-
Confidence 9999999887 467799999999 899999987654 0 1278889999999999999999998
Q ss_pred CeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--
Q psy12288 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-- 241 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-- 241 (393)
+++||||-.+|||+..+. .+|++|||+++......
T Consensus 438 ~~vHRDLAaRNVLi~~~~-------------------------------------------~~kIaDFGlar~~~~~~~y 474 (609)
T KOG0200|consen 438 PCVHRDLAARNVLITKNK-------------------------------------------VIKIADFGLARDHYNKDYY 474 (609)
T ss_pred CccchhhhhhhEEecCCC-------------------------------------------EEEEccccceeccCCCCce
Confidence 999999999999998775 59999999998543221
Q ss_pred --CCCC--CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 242 --ADEI--QTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 242 --~~~~--~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.... -+..|||||.+....|+.++||||+|+++||+++ |..|+++... +.++...
T Consensus 475 ~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--------------------~~~l~~~ 534 (609)
T KOG0200|consen 475 RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--------------------TEELLEF 534 (609)
T ss_pred EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc--------------------HHHHHHH
Confidence 1112 2445999999999999999999999999999999 8899975220 0111111
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+... +.+-|..++.++.++|+.||+.+|++||++.++.+
T Consensus 535 l~~G~--------------------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 535 LKEGN--------------------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HhcCC--------------------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 11111 11234566889999999999999999999998865
|
|
| >KOG0984|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-30 Score=211.39 Aligned_cols=201 Identities=21% Similarity=0.333 Sum_probs=162.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.-..+..||+|++|.|-+.++..+|+..|+|.+..+-. ...+...|+.+.... ..+|..+.+++
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~-------------~~CPf~V~FyG 112 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT-------------VDCPFTVHFYG 112 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC-------------CCCCeEEEeeh
Confidence 445567789999999999999999999999998875432 233444555544333 28899999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+. ..+.+||.||.|..++..+-.. ..++..++..+-+|+..+.+||.|||++..++|||+||+|||++.++
T Consensus 113 a~~----regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-- 186 (282)
T KOG0984|consen 113 ALF----REGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-- 186 (282)
T ss_pred hhh----ccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--
Confidence 776 5566999999998776654432 23456899999999999999999999999999999999999999888
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCC--CCCCCCCchhHHHhc---
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD--EIQTRQYRSVEVLIG--- 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~t~~y~aPE~~~~--- 258 (393)
++|+||||.+-.+..+... ..|-..|||||.+..
T Consensus 187 -----------------------------------------qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n 225 (282)
T KOG0984|consen 187 -----------------------------------------QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELN 225 (282)
T ss_pred -----------------------------------------cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccC
Confidence 5999999998877655332 456789999999864
Q ss_pred -CCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 259 -AGYGPAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 259 -~~~~~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
..|+-++||||||+++.||.+++.|+....
T Consensus 226 ~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 226 QKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred cccceeehhhhhhhhhhhhhhhccccccccC
Confidence 368999999999999999999999997544
|
|
| >KOG1025|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-30 Score=246.26 Aligned_cols=266 Identities=21% Similarity=0.262 Sum_probs=205.9
Q ss_pred ccccCCCCCCccccccCCeeC--CeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEeccccc--chhhHHHHHHH
Q psy12288 7 ESYMEYRPGGYCPVQIGDLFN--FRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSDQVY--ADTARDEIVLL 78 (393)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~~--~~~~~~E~~~l 78 (393)
|-.+.-+|.+..|-+..-.|. ...+..++||+|+||.||+|.+.-.|+ +||||++...+.. ...+.+|...|
T Consensus 673 el~eplapS~~~~n~~~lrI~kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~m 752 (1177)
T KOG1025|consen 673 ELVEPLAPSGFAANLALLRILKETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRM 752 (1177)
T ss_pred cccCccccccccchhhheeechhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHH
Confidence 445556666666544433332 245567899999999999998876655 6899988754433 57788999999
Q ss_pred HHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q psy12288 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157 (393)
Q Consensus 79 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~ 157 (393)
..+ +|+|+++++++... ..+-||++|+ .|.|++++.... ..+.....+.++.||++|+.
T Consensus 753 asl--------------dHpnl~RLLgvc~~-----s~~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~ 812 (1177)
T KOG1025|consen 753 ASL--------------DHPNLLRLLGVCML-----STLQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMK 812 (1177)
T ss_pred hcC--------------CCchHHHHhhhccc-----chHHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHH
Confidence 999 99999999999873 2267899999 899999997754 44888899999999999999
Q ss_pred HhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc
Q psy12288 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI 237 (393)
Q Consensus 158 ~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~ 237 (393)
|||++ +++||||-.+|+||...+ .+|+.|||+++.+
T Consensus 813 YLe~q-rlVHrdLaaRNVLVksP~-------------------------------------------hvkitdfgla~ll 848 (1177)
T KOG1025|consen 813 YLEEQ-RLVHRDLAARNVLVKSPN-------------------------------------------HVKITDFGLAKLL 848 (1177)
T ss_pred HHHhc-chhhhhhhhhheeecCCC-------------------------------------------eEEEEecchhhcc
Confidence 99999 999999999999997655 4999999999876
Q ss_pred cCCCCC-----CCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 238 DDHFAD-----EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 238 ~~~~~~-----~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
...... ..-.+-|||-|.+....|+.++||||+||++||++| |.-|+.+....+ |-+.+
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e----------I~dll----- 913 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE----------IPDLL----- 913 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH----------hhHHH-----
Confidence 433211 123567999999999999999999999999999998 988987665322 11110
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+ ..++++-|..++-++..+|.+||..|+..||+++++...
T Consensus 914 ---e-----------------------------~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 914 ---E-----------------------------KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred ---h-----------------------------ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 0 012233456778899999999999999999999987653
|
|
| >KOG0576|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-30 Score=246.64 Aligned_cols=257 Identities=24% Similarity=0.344 Sum_probs=205.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
-.++|.++.++|.|+||.||+|++..+++..|+|+++..... ...+++|+-+++.. .|+||+.++
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc--------------~h~nivay~ 78 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC--------------RHPNIVAYF 78 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC--------------CCcChHHHH
Confidence 356899999999999999999999999999999999865433 45568899899988 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....||.|||||++.+..+.... +.+++.++..+++..+.|++|||.. |=+|||||-.||++++.+.
T Consensus 79 gsyl----r~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gD-- 150 (829)
T KOG0576|consen 79 GSYL----RRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGD-- 150 (829)
T ss_pred hhhh----hhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCc--
Confidence 9998 566799999999655555554443 5589999999999999999999998 9999999999999988885
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh---c
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI---G 258 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~---~ 258 (393)
+|+.|||.+..++.. .....||++|||||+-. .
T Consensus 151 -----------------------------------------vklaDfgvsaqitati~KrksfiGtpywmapEvaaverk 189 (829)
T KOG0576|consen 151 -----------------------------------------VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERK 189 (829)
T ss_pred -----------------------------------------eeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhc
Confidence 999999998776543 44568999999999864 3
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..|...+|+|++|+...|+..-++|..+.-++ +.-.++..-|..|.....
T Consensus 190 ggynqlcdiwa~gitAiel~eLqpplfdlhpm-------r~l~LmTkS~~qpp~lkD----------------------- 239 (829)
T KOG0576|consen 190 GGYNQLCDIWALGITAIELGELQPPLFDLHPM-------RALFLMTKSGFQPPTLKD----------------------- 239 (829)
T ss_pred ccccccccccccccchhhhhhcCCcccccchH-------HHHHHhhccCCCCCcccC-----------------------
Confidence 46899999999999999998877766543311 111222222222221111
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...-++.|.+|++.+|..+|.+||+++.+|.|||...
T Consensus 240 -------------k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 240 -------------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred -------------CccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 1223567889999999999999999999999999864
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=202.68 Aligned_cols=207 Identities=33% Similarity=0.555 Sum_probs=175.9
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
||+|++|.||++....+++.+++|++..... ..+.+.+|+..++.+ .|++++++++.+. .
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l--------------~~~~i~~~~~~~~----~ 62 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL--------------NHPNIVKLYGVFE----D 62 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc--------------CCCCeeeEeeeee----c
Confidence 6899999999999988899999999886543 246788999999999 6688888888887 4
Q ss_pred CeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee-chhHHhHhhhhh
Q psy12288 114 GTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV-DYDKVRRMARDA 191 (393)
Q Consensus 114 ~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~-~~~~~~~~~~~~ 191 (393)
....++++|+++ +++...+.... ..++...+..++.+++.++.+||+. |++|+||+|.||+++. +.
T Consensus 63 ~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~---------- 130 (215)
T cd00180 63 ENHLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNG---------- 130 (215)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCC----------
Confidence 577999999995 88888776542 3478899999999999999999998 9999999999999986 44
Q ss_pred hcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CCCchhhH
Q psy12288 192 TKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GYGPAADI 267 (393)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~~Di 267 (393)
.++++|||.+...... .....+...|++||..... ..+.+.|+
T Consensus 131 ---------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~ 177 (215)
T cd00180 131 ---------------------------------KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDI 177 (215)
T ss_pred ---------------------------------cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhh
Confidence 4999999988765543 3445678899999999887 77899999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
|++|++++++
T Consensus 178 ~~lg~~~~~l---------------------------------------------------------------------- 187 (215)
T cd00180 178 WSLGVILYEL---------------------------------------------------------------------- 187 (215)
T ss_pred HHHHHHHHHH----------------------------------------------------------------------
Confidence 9999999999
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 384 (393)
..+.+++.+|+..||.+||++.++++|+
T Consensus 188 ---------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 0345999999999999999999999885
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=217.76 Aligned_cols=248 Identities=17% Similarity=0.160 Sum_probs=181.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC-----ceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK-----TFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
..|+++...+-+|+||.||+|.++... +.|-+|.++..... ...+..|.-++..+ .|+|
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~--------------sH~n 348 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA--------------SHPN 348 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC--------------cCCC
Confidence 468999999999999999999766432 23555655533211 12222333333332 6999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHh------cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIAR------SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~------~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
++.+.++... ....++.++++. -|+|..++.- ...++++..+...++.|++.|+++||.+ |++|.||-.
T Consensus 349 ll~V~~V~ie---~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAa 424 (563)
T KOG1024|consen 349 LLSVLGVSIE---DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAA 424 (563)
T ss_pred ccceeEEEee---ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-Ccccchhhh
Confidence 9888877663 455688899999 4677766652 1123466677788999999999999998 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCC-----CCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQT 247 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~-----~~t 247 (393)
+|.++++.- ++||+|-.+++.+-....+. ..+
T Consensus 425 RNCvIdd~L-------------------------------------------qVkltDsaLSRDLFP~DYhcLGDnEnRP 461 (563)
T KOG1024|consen 425 RNCVIDDQL-------------------------------------------QVKLTDSALSRDLFPGDYHCLGDNENRP 461 (563)
T ss_pred hcceehhhe-------------------------------------------eEEeccchhccccCcccccccCCCCCCc
Confidence 999997654 69999999998764332222 236
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
..||+||.+....|+.++|+|||||++|||++ |+.|+-.-++ .++..-.++.++..+
T Consensus 462 vkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP---------------------fEm~~ylkdGyRlaQ- 519 (563)
T KOG1024|consen 462 VKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP---------------------FEMEHYLKDGYRLAQ- 519 (563)
T ss_pred ccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH---------------------HHHHHHHhccceecC-
Confidence 67999999999999999999999999999998 9999865442 222222222232222
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
|.+++++++.+|..||..+|++||+++|+..
T Consensus 520 -------------------------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 520 -------------------------PFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred -------------------------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 3577889999999999999999999999875
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=252.02 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=147.0
Q ss_pred ccceeccccceeecC---CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 98 EKVIRLLNDFKIYSR---NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~---~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
++|.++++.|..... ....++.++|+++++|.+.+... ...++..++..++.||+.||+|||++ ||+||||||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrDlKP~N 110 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHNVRPSC 110 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC-CeeeccCCchh
Confidence 355556665532221 23457788999999999998643 24589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------------
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------------- 240 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------------- 240 (393)
||++..+.. .....+.+.. .+ ......+|++|||+++.....
T Consensus 111 iLl~~~~~~---------k~~d~~~~~~------------~~---~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~ 166 (793)
T PLN00181 111 FVMSSFNHV---------SFIESASCSD------------SG---SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQ 166 (793)
T ss_pred EEEcccCcE---------EEeeccccCc------------cc---ccccCcccccccccccccccccccchhhhhccccC
Confidence 999654320 0000111100 00 011235899999988643210
Q ss_pred -----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHh
Q psy12288 241 -----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315 (393)
Q Consensus 241 -----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 315 (393)
.....+|+.|+|||++.+..++.++|||||||++|||++|..|+.... ..+..+.. ...|...
T Consensus 167 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~~--~~~~~~~-- 234 (793)
T PLN00181 167 PFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLRH--RVLPPQI-- 234 (793)
T ss_pred CCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHHH--hhcChhh--
Confidence 111357889999999999999999999999999999999887764211 11111110 0111100
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
........+++.+||..||.+||++.|+++||||...
T Consensus 235 -------------------------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 235 -------------------------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred -------------------------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 0112344688899999999999999999999999763
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=198.33 Aligned_cols=194 Identities=34% Similarity=0.538 Sum_probs=163.2
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
|++.+.||.|++|.||+|.+..+++.+++|.+..... ..+.+.+|+..++.+ .|++++++++.+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~--------------~~~~i~~~~~~~ 66 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL--------------KHPNIVKLYGVF 66 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC--------------CCCChhhheeee
Confidence 5778999999999999999998899999999875433 356778899999988 778888888877
Q ss_pred eeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....++++|++. ++|.+.+..... .++...+..++.+++.++.+||+. +++|+||+|+||+++.+.
T Consensus 67 ~----~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~----- 135 (225)
T smart00221 67 E----DPEPLYLVMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDG----- 135 (225)
T ss_pred e----cCCceEEEEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCC-----
Confidence 6 4567899999994 488888766432 178889999999999999999998 999999999999997664
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHH-hcCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVL-IGAGY 261 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~-~~~~~ 261 (393)
.++|+|||.+....... ....++..|++||.+ ...++
T Consensus 136 --------------------------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~ 177 (225)
T smart00221 136 --------------------------------------LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGY 177 (225)
T ss_pred --------------------------------------CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCC
Confidence 49999999887664432 445678889999998 55667
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCC
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDP 286 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~ 286 (393)
+.++|+|+||+++++|++|+.||..
T Consensus 178 ~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 178 GEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CchhhHHHHHHHHHHHHHCCCCccc
Confidence 8899999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1165|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=197.21 Aligned_cols=207 Identities=23% Similarity=0.332 Sum_probs=174.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+++-.|+|.++||+|+||+++.|.+..++++||||+-.. ......++.|....+.|.... .|+..+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~-------------GIP~vY 90 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTE-------------GIPQVY 90 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCC-------------CCCcee
Confidence 667799999999999999999999999999999997553 346788999999999997444 333332
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
- ++..+.+-.+|+|++|.+|.+++..+. ..|+..++..++.|++.-++++|++ .++.|||||+|+|+...+++.
T Consensus 91 Y----FGqeG~~NiLVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~ 164 (449)
T KOG1165|consen 91 Y----FGQEGKYNILVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKD 164 (449)
T ss_pred e----eccccchhhhhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCC
Confidence 2 344788899999999999999998765 5599999999999999999999999 999999999999997655311
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhH
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVE 254 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE 254 (393)
...+.++|||+|..+.++ .....||..||+--
T Consensus 165 --------------------------------------~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSIN 206 (449)
T KOG1165|consen 165 --------------------------------------ANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSIN 206 (449)
T ss_pred --------------------------------------CceEEEEeccchhhhcCccccccCccccccccccceeeeEee
Confidence 114899999999877543 22347899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCC
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~ 289 (393)
...+.+.++..|+=|||.+|+..+-|..||++..-
T Consensus 207 THlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 207 THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 99999999999999999999999999999998764
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=191.98 Aligned_cols=167 Identities=19% Similarity=0.217 Sum_probs=122.4
Q ss_pred ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCC
Q psy12288 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205 (393)
Q Consensus 126 ~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (393)
|+|.+.+.... ..+++.++..++.|++.||.|||++ + ||+||+++.++
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~------------------------ 48 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDG------------------------ 48 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCcc------------------------
Confidence 57777776532 4599999999999999999999988 6 99999998776
Q ss_pred CCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy12288 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFD 285 (393)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~ 285 (393)
.+++ ||++...... ...+|+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 49 -------------------~~~~--fG~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~ 105 (176)
T smart00750 49 -------------------LLKL--DGSVAFKTPE--QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYN 105 (176)
T ss_pred -------------------ceee--ccceEeeccc--cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 3677 9987754432 2367899999999999999999999999999999999999996
Q ss_pred CCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHH--HHHHHH
Q psy12288 286 PKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEAS--DFADFL 363 (393)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li 363 (393)
..... ...+..+........... ...+...+. .+.++|
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 106 EEREL-----SAILEILLNGMPADDPRD-----------------------------------RSNLESVSAARSFADFM 145 (176)
T ss_pred ccchh-----cHHHHHHHHHhccCCccc-----------------------------------cccHHHHHhhhhHHHHH
Confidence 43311 111111111110000000 000012222 688999
Q ss_pred HhccccCCCCCcCHHHHhcCCCCC
Q psy12288 364 LPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 364 ~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
.+||..||.+||++.|+++|+|+.
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHH
Confidence 999999999999999999999875
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1163|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=184.10 Aligned_cols=204 Identities=20% Similarity=0.303 Sum_probs=167.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+.+|+++++||.|+||.+|.|.....|+.||||+-..+. ....+.-|..+.+.+.+...+ | .+..
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~Gi----------P---~i~~ 78 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGI----------P---HIRH 78 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCC----------c---hhhh
Confidence 3568999999999999999999999999999999876543 346678899999999655432 2 2222
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
. ..+..+-++||+.+|.+|.+++.-+. ..++..+++.++.|++.-++|+|.+ +.+||||||+|+|+..+-.
T Consensus 79 y----~~e~~ynvlVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh--- 149 (341)
T KOG1163|consen 79 Y----GTEKDYNVLVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRH--- 149 (341)
T ss_pred h----ccccccceeeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccc---
Confidence 2 23677889999999999998886654 4599999999999999999999998 9999999999999965532
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhHH
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVEV 255 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE~ 255 (393)
..++.|+|||++....+. .....||..|.+--.
T Consensus 150 -------------------------------------~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinA 192 (341)
T KOG1163|consen 150 -------------------------------------CNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINA 192 (341)
T ss_pred -------------------------------------cceEEEEeccchhhhccccccccCccccCCccceeeeehhhhh
Confidence 125899999999876432 234478999999888
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAG 289 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~ 289 (393)
..+...++..|+=|+|.++...--|..||++...
T Consensus 193 h~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 193 HLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred hhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 8888889999999999999999999999997763
|
|
| >KOG1164|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=195.45 Aligned_cols=208 Identities=27% Similarity=0.308 Sum_probs=167.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCC-ceEEEEEEeccccc-chhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVKSDQVY-ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+|++.++||+|+||.||.|.+..++ ..+|+|+....... ...+..|..+++.+... ....++..+++.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~----------~~~~~~~~~~~~ 88 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKK----------NGPSHFPKLLDH 88 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhh----------cCCCCCCEEEEe
Confidence 8999999999999999999988775 67899987654222 23788999999999531 123455555555
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
.. ..+.+.++||+.+|.+|.++........++..++.+++.|++.+|++||+. |++||||||+|+++......
T Consensus 89 G~---~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~--- 161 (322)
T KOG1164|consen 89 GR---STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRS--- 161 (322)
T ss_pred cc---CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCc---
Confidence 53 256788999999999999988766656799999999999999999999998 99999999999999654310
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccc--ccc-C-------C---CCCCCCCCCCchh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC--WID-D-------H---FADEIQTRQYRSV 253 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~--~~~-~-------~---~~~~~~t~~y~aP 253 (393)
..-.+.|.|||+++ ... . . .....||..|.++
T Consensus 162 -----------------------------------~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~ 206 (322)
T KOG1164|consen 162 -----------------------------------EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASI 206 (322)
T ss_pred -----------------------------------ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccH
Confidence 01158999999998 321 1 1 1234599999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
.+..+...+++.|+||++.++.++..|..||....
T Consensus 207 ~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 207 NVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred HHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 99999999999999999999999999999997655
|
|
| >KOG0590|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-25 Score=221.70 Aligned_cols=265 Identities=19% Similarity=0.254 Sum_probs=183.6
Q ss_pred CeE-EEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRY-HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.| ....++|.|++|.|+.+......+.++.|.+... ....+...... +...+ .+-....|++++..+
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~-i~sE~--------~i~~~l~h~~~~e~l 387 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYN-ITSEF--------CIGSSLSHPNIIETL 387 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhh-hhhhe--------eecccccCCchhhhH
Confidence 456 4567899999998888877777666666654311 11111110100 11111 111222677776666
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
..+.. .....-+||||.++|+..+.+. ..++..++..++.|++.|+.|+|+. |+.|||+|++|+++..++
T Consensus 388 ~~~~~----~~~~~~~mE~~~~Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g--- 457 (601)
T KOG0590|consen 388 DIVQE----IDGILQSMEYCPYDLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENG--- 457 (601)
T ss_pred HHHhh----cccchhhhhcccHHHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCC---
Confidence 55552 2222333999966999988775 2388899999999999999999998 999999999999998877
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHHh
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~ 257 (393)
.+|++|||.+...... ....+|+..|+|||++.
T Consensus 458 ----------------------------------------~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~ 497 (601)
T KOG0590|consen 458 ----------------------------------------ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLT 497 (601)
T ss_pred ----------------------------------------ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccccc
Confidence 4999999987654322 23457899999999999
Q ss_pred cCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+..| .+..||||.|+++..|++|+.||..+...+... ....+ ...
T Consensus 498 ~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--------~~~~~---------------------~~~----- 543 (601)
T KOG0590|consen 498 GKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--------KTNNY---------------------SDQ----- 543 (601)
T ss_pred ccccCcchhhhhhccceEEEEecCCCccccccccccch--------hhhcc---------------------ccc-----
Confidence 9988 678999999999999999999997665433110 00000 000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+..+...+....+..-..+|.+||++||.+|.|+++|++++||+.+.
T Consensus 544 -----~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 544 -----RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred -----cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 0011111122345566778999999999999999999999999998764
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=176.23 Aligned_cols=245 Identities=17% Similarity=0.181 Sum_probs=147.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcc-cCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGR-KSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~-~~~~~~~~~~~~~~~~i~~~ 103 (393)
.....+.||.|+++.||.+.+..|++.+|+|++...... .+.+.+|.-....+.. .+.... ..+-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a-----~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEA-----YRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHH-----HHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHH-----HHhceEEee
Confidence 456788999999999999999999999999987643211 1223333322222111 000000 001112222
Q ss_pred ccccee--------ecCCCeE-----EEEEEeeccccHHHHHHh---cCCCC--CCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 104 LNDFKI--------YSRNGTH-----ICMVFEVMGYNLLRLIAR---SDYKG--IHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 104 ~~~~~~--------~~~~~~~-----~~iv~e~~~~~l~~~~~~---~~~~~--l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
++.... ....... .+++|+-+.++|..++.. ..... +.......+..|+++.+++||.. |+
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-Gl 166 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GL 166 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TE
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ce
Confidence 222221 1111122 377888888888877642 21111 22223345568999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCC
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI 245 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~ 245 (393)
+|+||+|+|++++.++ .+.|+||+.....+.......
T Consensus 167 VHgdi~~~nfll~~~G-------------------------------------------~v~Lg~F~~~~r~g~~~~~~~ 203 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDG-------------------------------------------GVFLGDFSSLVRAGTRYRCSE 203 (288)
T ss_dssp EEST-SGGGEEE-TTS--------------------------------------------EEE--GGGEEETTEEEEGGG
T ss_pred EecccceeeEEEcCCC-------------------------------------------CEEEcChHHHeecCceeeccC
Confidence 9999999999999888 499999998776665433344
Q ss_pred CCCCCchhHHHhcC--------CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcC
Q psy12288 246 QTRQYRSVEVLIGA--------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317 (393)
Q Consensus 246 ~t~~y~aPE~~~~~--------~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 317 (393)
.+..|.+||..... .++.+.|.|+||+++|.|+|+..||...+.......
T Consensus 204 ~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------------------- 261 (288)
T PF14531_consen 204 FPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------------------- 261 (288)
T ss_dssp S-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG----------------------
T ss_pred CCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc----------------------
Confidence 56789999987553 468899999999999999999999964432111000
Q ss_pred cccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCC
Q psy12288 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374 (393)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 374 (393)
.+....+.++.+.+||+++|.+||++|
T Consensus 262 ------------------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 262 ------------------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ------------------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ------------------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 111123677888999999999999998
|
|
| >KOG4158|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=180.36 Aligned_cols=258 Identities=17% Similarity=0.210 Sum_probs=179.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc-----------------------------------eEEEEEEecccccchhhH
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT-----------------------------------FVALKIVKSDQVYADTAR 72 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----------------------------------~vaiK~~~~~~~~~~~~~ 72 (393)
++|++.+.||+|....||.|+...++. +.|||++-+-. .-.
T Consensus 157 ddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~----~~s 232 (598)
T KOG4158|consen 157 DDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFE----HDS 232 (598)
T ss_pred hhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccc----cCC
Confidence 579999999999999999997655221 23455432210 012
Q ss_pred HHHHHHHHhcccCC------------------CCcccccCcccccceeccccceeec-----------------------
Q psy12288 73 DEIVLLKAVGRKSN------------------VHSSAYNTQASEKVIRLLNDFKIYS----------------------- 111 (393)
Q Consensus 73 ~E~~~l~~l~~~~~------------------~~~~~~~~~~~~~i~~~~~~~~~~~----------------------- 111 (393)
....+|+.++..-. ..-.-.+...||||+++...|...-
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 23344444433211 1112234468999999998885310
Q ss_pred CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhh
Q psy12288 112 RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDA 191 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~ 191 (393)
..+..+|+||..+..+|..++.... .+....+-++.|+++|+.+||.+ ||.|||+|.+|||+..|.+.+
T Consensus 313 g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~------- 381 (598)
T KOG4158|consen 313 GEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKH-GVAHRDLKSDNILLELDDDEI------- 381 (598)
T ss_pred CCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHc-cchhhcccccceEEEecCCCC-------
Confidence 1345689999999999999987653 67778888999999999999998 999999999999997665321
Q ss_pred hcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---------cCCCCCCCCCCCCchhHHHhcCCC-
Q psy12288 192 TKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---------DDHFADEIQTRQYRSVEVLIGAGY- 261 (393)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~- 261 (393)
..++++|||.+.-. .+.....-|+-..||||+....+-
T Consensus 382 --------------------------------P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 382 --------------------------------PQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred --------------------------------cEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 14899999975321 122334456778899999876531
Q ss_pred -----CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 262 -----GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 262 -----~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
-.++|.|+.|.+.||++....||.+.......... ...
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-------Yqe------------------------------ 472 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-------YQE------------------------------ 472 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-------hhh------------------------------
Confidence 35899999999999999999999864432211100 000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 378 (393)
.+...+++.++..+.+++..+|+.||++|+++.
T Consensus 473 ---------~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 473 ---------SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred ---------hhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 122235567788889999999999999999853
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-20 Score=173.71 Aligned_cols=259 Identities=29% Similarity=0.411 Sum_probs=189.6
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccc-cceecc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASE-KVIRLL 104 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~-~i~~~~ 104 (393)
|.+...||.|+||.||.+.+. ..+++|.+..... ....+.+|..+++.+ .++ +++++.
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~--------------~~~~~i~~~~ 64 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASL--------------NHPPNIVKLY 64 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHc--------------cCCcceeeEE
Confidence 788999999999999999887 7789998875432 255678888888888 444 678888
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+. .....+++++++ ++++.+.+..... ..+.......++.|++.+++++|.. +++|||+||+||+++....
T Consensus 65 ~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~ 139 (384)
T COG0515 65 DFFQ----DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGR 139 (384)
T ss_pred EEEe----cCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCC
Confidence 7774 444589999999 6676655544321 1488899999999999999999998 9999999999999976651
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---------CCCCCCCCCCchh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------FADEIQTRQYRSV 253 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------~~~~~~t~~y~aP 253 (393)
.++++|||.+...... .....++..|++|
T Consensus 140 ------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p 177 (384)
T COG0515 140 ------------------------------------------VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177 (384)
T ss_pred ------------------------------------------eEEEeccCcceecCCCCccccccccccccccccccCCH
Confidence 3899999988754322 3456789999999
Q ss_pred HHHhc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCC--ChHHHhcCcccccccCCCC
Q psy12288 254 EVLIG---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI--PKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 254 E~~~~---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~--p~~~~~~~~~~~~~~~~~~ 328 (393)
|.+.+ .......|+||+|+++++++.|..||...... ................ .....
T Consensus 178 e~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-------------- 240 (384)
T COG0515 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTPSLASPLS-------------- 240 (384)
T ss_pred HHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCcccccccC--------------
Confidence 99998 56789999999999999999999997654421 0011222221111110 00000
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.. ........+.+++.+++..+|..|.+..+...++|....
T Consensus 241 ------------------~~--~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 241 ------------------PS--NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred ------------------cc--ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 00 001223567799999999999999999998888666543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-22 Score=185.09 Aligned_cols=159 Identities=23% Similarity=0.190 Sum_probs=118.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCC-CCceEEEEEEecc------cccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSD------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.+.++|++.+.||+|+||.||+|++.. +++.||||..... ......+.+|+.+|+.+ .|
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L--------------~h 80 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV--------------RG 80 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc--------------cC
Confidence 456789999999999999999998876 6778899986532 11245688999999999 56
Q ss_pred cccee-ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC-CCCc
Q psy12288 98 EKVIR-LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI-KPEN 174 (393)
Q Consensus 98 ~~i~~-~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl-kp~N 174 (393)
+++++ +++ .+..++||||+ +++|. ... . .. ...++.|++.||++||++ ||+|||| ||+|
T Consensus 81 ~~iv~~l~~--------~~~~~LVmE~~~G~~L~-~~~--~---~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~N 142 (365)
T PRK09188 81 IGVVPQLLA--------TGKDGLVRGWTEGVPLH-LAR--P---HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQN 142 (365)
T ss_pred CCCCcEEEE--------cCCcEEEEEccCCCCHH-HhC--c---cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcce
Confidence 66653 322 12378999999 55554 221 1 11 146789999999999998 9999999 9999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----------CCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----------FAD 243 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----------~~~ 243 (393)
||++.++ .++|+|||+++..... ..+
T Consensus 143 ILv~~~~-------------------------------------------~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~ 179 (365)
T PRK09188 143 WLMGPDG-------------------------------------------EAAVIDFQLASVFRRRGALYRIAAYEDLRH 179 (365)
T ss_pred EEEcCCC-------------------------------------------CEEEEECccceecccCcchhhhhhhhhhhh
Confidence 9997655 4999999998865322 123
Q ss_pred CCCCCCCchhHHHhc
Q psy12288 244 EIQTRQYRSVEVLIG 258 (393)
Q Consensus 244 ~~~t~~y~aPE~~~~ 258 (393)
..++..|++||.+..
T Consensus 180 ~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 180 LLKHKRTYAPDALTP 194 (365)
T ss_pred hhccCccCCcccCCh
Confidence 356777899998864
|
|
| >KOG0603|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-23 Score=194.95 Aligned_cols=237 Identities=21% Similarity=0.348 Sum_probs=187.3
Q ss_pred EecccCceEEEEEEeCC---CCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 35 KLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++|+|+||.|++++... .+..+|.|++++... .......|-.++..+. .++.++++...|+
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-------------~~~f~v~lhyafq 67 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-------------NTPFLVKLHYAFQ 67 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-------------CCCceeeeeeeec
Confidence 47999999999986443 356788888764321 1223445666777762 5888889888887
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
..+..++++++. ++.++....... .+.+.....+...++.|++.+|+. +++|+|+|++||+++.++.
T Consensus 68 ----t~~kl~l~ld~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Gh----- 135 (612)
T KOG0603|consen 68 ----TDGKLYLILDFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGH----- 135 (612)
T ss_pred ----cccchhHhhhhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCc-----
Confidence 667789999999 668777766553 367778888999999999999998 9999999999999998884
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhH
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di 267 (393)
+++.|||+++........ +||..|||||+.. +...++|.
T Consensus 136 --------------------------------------i~~tdfglske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ 174 (612)
T KOG0603|consen 136 --------------------------------------IKLTDFGLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADW 174 (612)
T ss_pred --------------------------------------cccCCchhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccc
Confidence 899999998866444333 8899999999998 56889999
Q ss_pred HhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 268 wSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
||+|+++++|++|..||.. +... .+++.
T Consensus 175 ws~gvl~felltg~~pf~~----------~~~~------------------------------------------~Il~~ 202 (612)
T KOG0603|consen 175 WSFGVLAFELLTGTLPFGG----------DTMK------------------------------------------RILKA 202 (612)
T ss_pred hhhhhhHHHHhhCCCCCch----------HHHH------------------------------------------HHhhh
Confidence 9999999999999999964 2222 22333
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....+...+..+.++++.++..+|..|.. +.|+++|+||..+
T Consensus 203 ~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 203 ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 44556777888999999999999999996 4899999999764
|
|
| >KOG0195|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-22 Score=171.43 Aligned_cols=241 Identities=15% Similarity=0.192 Sum_probs=182.8
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEec---ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS---DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+..+|.+...|..|+|+++.. .+++|+++. +......+..|.-.|+.+ .||||+++++.
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrif--------------shpnilpvlga 255 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIF--------------SHPNILPVLGA 255 (448)
T ss_pred hhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeee--------------cCCchhhhhhh
Confidence 34677899999999999988644 455676653 344456778888888888 89999999999
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee-eccCCCCceEEeechhHH
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII-HTDIKPENILMCVDYDKV 184 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~-H~dlkp~NIl~~~~~~~~ 184 (393)
+. ....+.++..|+ .++|++.+.....--....++.+++.+++.|++|||+--.++ ---|....+++|+|-.
T Consensus 256 cn----sppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlt-- 329 (448)
T KOG0195|consen 256 CN----SPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLT-- 329 (448)
T ss_pred cc----CCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhh--
Confidence 97 556789999999 789999987765444567788999999999999999853443 3468888999988763
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCC---
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY--- 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--- 261 (393)
.++...|--++.. .......+.||+||.++..+-
T Consensus 330 ---------------------------------------arismad~kfsfq----e~gr~y~pawmspealqrkped~n 366 (448)
T KOG0195|consen 330 ---------------------------------------ARISMADTKFSFQ----EVGRAYSPAWMSPEALQRKPEDLN 366 (448)
T ss_pred ---------------------------------------hheecccceeeee----ccccccCcccCCHHHHhcCchhcc
Confidence 1344555443332 223345789999999998753
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
-+++|+|||++++||+.|.+.||.+.++++... .+.+.|..
T Consensus 367 ~raadmwsfaillwel~trevpfadlspmecgm-------kialeglr-------------------------------- 407 (448)
T KOG0195|consen 367 IRAADMWSFAILLWELNTREVPFADLSPMECGM-------KIALEGLR-------------------------------- 407 (448)
T ss_pred hhhhhHHHHHHHHHHhhccccccccCCchhhhh-------hhhhcccc--------------------------------
Confidence 468999999999999999999999888766432 22233321
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
...+.+.+....+||.-|++.||.+||.++.++
T Consensus 408 -------v~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 408 -------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 124567788899999999999999999988764
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=162.60 Aligned_cols=176 Identities=16% Similarity=0.161 Sum_probs=124.9
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchh----------hHHHHHHHHHhcccCCCCccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT----------ARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~----------~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
+.++.+|++.+.+|.|+||.||++.. ++..+|+|++.......+. +.+|+..+..+
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL------------ 92 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV------------ 92 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH------------
Confidence 35688999999999999999999755 4667999998744322222 47888889998
Q ss_pred CcccccceeccccceeecC----CCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 94 TQASEKVIRLLNDFKIYSR----NGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~----~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|+++..+.+.+.+... ..+..+++|||+. .+|.+.. .++. ....+++.++..+|.. |++||
T Consensus 93 --~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~-gi~H~ 159 (232)
T PRK10359 93 --RSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQH-GMVSG 159 (232)
T ss_pred --HHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHc-CCccC
Confidence 56666666555443211 1345899999995 4565542 1332 2456899999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~ 248 (393)
|++|+||+++.++ ++++|||.........
T Consensus 160 Dikp~Nili~~~g--------------------------------------------i~liDfg~~~~~~e~~------- 188 (232)
T PRK10359 160 DPHKGNFIVSKNG--------------------------------------------LRIIDLSGKRCTAQRK------- 188 (232)
T ss_pred CCChHHEEEeCCC--------------------------------------------EEEEECCCcccccchh-------
Confidence 9999999997654 8999999765432111
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHh
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELAT 279 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~ 279 (393)
..........+..++|+||||+++.-+..
T Consensus 189 --a~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 189 --AKDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred --hHHHHHHHhHhcccccccceeEeehHHHH
Confidence 11113344456789999999998776543
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-21 Score=189.99 Aligned_cols=243 Identities=22% Similarity=0.292 Sum_probs=172.2
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.|...+.||++.|=.|.+|.+... .|+||++-+. ......+.+++.-.+... ..+||++++...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l------------~~~pn~lPfqk~ 89 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRLEEIKFAL------------MKAPNCLPFQKV 89 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHHHHHHHHh------------hcCCcccchHHH
Confidence 688899999999999999977643 3899987643 333455555554444221 278888888776
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe-echhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC-VDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~-~~~~~~~ 185 (393)
.. .+...++|=+|...+|.+.+..+.. +...+.+-|+-|+++||.-+|.. ||||||||.+|||++ .|+
T Consensus 90 ~~----t~kAAylvRqyvkhnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW---- 158 (1431)
T KOG1240|consen 90 LV----TDKAAYLVRQYVKHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNW---- 158 (1431)
T ss_pred HH----hhHHHHHHHHHHhhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeech----
Confidence 55 4555677778888899998877654 67788889999999999999998 999999999999995 444
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCC-------CCCCCCCCchhHH
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFA-------DEIQTRQYRSVEV 255 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~-------~~~~t~~y~aPE~ 255 (393)
+.|+||..-++.- ++.. +...-..|.|||.
T Consensus 159 ----------------------------------------~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPER 198 (1431)
T KOG1240|consen 159 ----------------------------------------LYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPER 198 (1431)
T ss_pred ----------------------------------------hhhhcccccCCccCCCCCcccceEEEecCCceeeecChHh
Confidence 7899998654321 1100 1122346999999
Q ss_pred HhcC----------C-CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 256 LIGA----------G-YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 256 ~~~~----------~-~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
+... + .+++=||+|+||+++||++ |.+||. ..++-.........|...++
T Consensus 199 Fv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----------LSQL~aYr~~~~~~~e~~Le-------- 260 (1431)
T KOG1240|consen 199 FVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----------LSQLLAYRSGNADDPEQLLE-------- 260 (1431)
T ss_pred hhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----------HHHHHhHhccCccCHHHHHH--------
Confidence 8652 2 5788999999999999988 799994 22221111111111121111
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.-++..+..+|..|++.||++|.+|++.|+-
T Consensus 261 -----------------------------~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 261 -----------------------------KIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred -----------------------------hCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1223467799999999999999999999875
|
|
| >KOG0606|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-20 Score=187.88 Aligned_cols=220 Identities=21% Similarity=0.332 Sum_probs=154.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|..++.|..|+||.||.++|+.+.+.+|+|+-+.+- ... + ++... ..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-ilR---n---ilt~a--------------~np-------- 132 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-ILR---N---ILTFA--------------GNP-------- 132 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch-hhh---c---ccccc--------------CCc--------
Confidence 358999999999999999999999999999996544321 100 0 11111 111
Q ss_pred ceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 107 FKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
+.| |+=...+..- +.++.+. +.+++|+|.. ||+|||+||+|.++..=+
T Consensus 133 -----------fvv-----gDc~tllk~~--g~lPvdm--------vla~Eylh~y-givhrdlkpdnllIT~mG----- 180 (1205)
T KOG0606|consen 133 -----------FVV-----GDCATLLKNI--GPLPVDM--------VLAVEYLHSY-GIVHRDLKPDNLLITSMG----- 180 (1205)
T ss_pred -----------cee-----chhhhhcccC--CCCcchh--------hHHhHhhccC-CeecCCCCCCcceeeecc-----
Confidence 111 3333333322 2233333 6789999998 999999999999997655
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc----CC--------------CCCCCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID----DH--------------FADEIQTR 248 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~----~~--------------~~~~~~t~ 248 (393)
.+|++|||++.... .. ....+||+
T Consensus 181 --------------------------------------hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTP 222 (1205)
T KOG0606|consen 181 --------------------------------------HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTP 222 (1205)
T ss_pred --------------------------------------cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCc
Confidence 49999999875421 00 11237899
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
.|.|||++...+|+..+|+|++|+|+|+.+.|+.||.+.++.+ .+...+.....-|+.
T Consensus 223 eyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee------lfg~visd~i~wpE~---------------- 280 (1205)
T KOG0606|consen 223 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFGQVISDDIEWPEE---------------- 280 (1205)
T ss_pred cccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH------HHhhhhhhhcccccc----------------
Confidence 9999999999999999999999999999999999998876332 222222221111111
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc---CHHHHhcCCCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA---SAADCLRHPWLNPRR 390 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~ell~hp~~~~~~ 390 (393)
......++.++|.++|..+|..|. .+-++-+|+||....
T Consensus 281 -----------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 281 -----------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred -----------------------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 123456788999999999999998 467899999998753
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=156.47 Aligned_cols=123 Identities=18% Similarity=0.170 Sum_probs=87.5
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEeccccc----------chhh-----------------HHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----------ADTA-----------------RDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------~~~~-----------------~~E~~~l~~l~~~~ 85 (393)
.+.||+|++|.||+|.+. +|+.||+|+++..... ...+ ..|+..++.+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999887 8999999998754211 1122 24888888884321
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHh-hhcC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL-RLIARSDYKGIHIQNVRTIIKQVLEGLNYL-HTQC 163 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~-~~~~~~~~~~l~~~~~~~i~~ql~~~l~~l-H~~~ 163 (393)
. .+|.+. . . .. .++||||++++.+ ...... ..++...+..++.|++.+|.++ |+.
T Consensus 81 v---------~~p~~~------~-~--~~--~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~- 137 (190)
T cd05147 81 I---------PCPEPI------L-L--KS--HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDC- 137 (190)
T ss_pred C---------CCCcEE------E-e--cC--CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 1 111111 1 0 11 3799999965433 332222 3588899999999999999999 677
Q ss_pred CeeeccCCCCceEEee
Q psy12288 164 RIIHTDIKPENILMCV 179 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~ 179 (393)
|++||||||+||+++.
T Consensus 138 giiHrDlkP~NIli~~ 153 (190)
T cd05147 138 RLVHADLSEYNLLYHD 153 (190)
T ss_pred CcccCCCCHHHEEEEC
Confidence 9999999999999973
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=149.08 Aligned_cols=124 Identities=20% Similarity=0.158 Sum_probs=87.9
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEeccccc---------------------------chhhHHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---------------------------ADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~ 85 (393)
.+.||+|++|.||+|.+. +|+.||||++...... ......|...+..+.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-- 78 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE-- 78 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh--
Confidence 468999999999999887 8999999998754211 0112467778888743
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeecccc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYN-LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QC 163 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~ 163 (393)
+++........ . ..++||||++|. +....... ..++...+..++.|++.++.++|. .
T Consensus 79 ------------~~i~~p~~~~~----~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~- 137 (190)
T cd05145 79 ------------AGVPVPEPILL----K--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEA- 137 (190)
T ss_pred ------------CCCCCceEEEe----c--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 32211111111 1 137999999554 33322222 347788999999999999999999 7
Q ss_pred CeeeccCCCCceEEeech
Q psy12288 164 RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~ 181 (393)
|++||||||+||+++ ++
T Consensus 138 givHrDlkP~NIll~-~~ 154 (190)
T cd05145 138 GLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CEecCCCChhhEEEE-CC
Confidence 999999999999997 44
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1166|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.1e-18 Score=172.26 Aligned_cols=201 Identities=20% Similarity=0.259 Sum_probs=150.1
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+-+.+|.|.+.||+|+||.||+|.+.. ++.||+|+-+...... +.--.+++.+|. .. .-+.++.+.
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE--fYI~~q~~~RLk-~~----------~~~~~~~~~ 760 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE--FYICLQVMERLK-PQ----------MLPSIMHIS 760 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee--eeehHHHHHhhc-hh----------hhcchHHHH
Confidence 447899999999999999999998877 9999999877543222 122223344442 11 112233333
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
..+. ..+.-++|++|. .|+|++++... ..+++..++.++.|++..++.||.. +|+|+||||+|+|+...-.
T Consensus 761 ~a~~----~~~~S~lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~- 832 (974)
T KOG1166|consen 761 SAHV----FQNASVLVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREIC- 832 (974)
T ss_pred HHHc----cCCcceeeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccC-
Confidence 3333 234467899999 89999998743 4588999999999999999999997 9999999999999953321
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~~~~t~~y~aPE~~~~ 258 (393)
.+.. ...++|+|||.+..+. ......++|-.+-++|...+
T Consensus 833 -------------------------------~~~~----~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g 877 (974)
T KOG1166|consen 833 -------------------------------ADSD----SKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG 877 (974)
T ss_pred -------------------------------CCCc----ccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC
Confidence 0000 1148999999886542 23345577899999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCC
Q psy12288 259 AGYGPAADIWSTACMAFELATGDY 282 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~ 282 (393)
++++..+|.|.|+.+++.|+.|++
T Consensus 878 rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 878 RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred CCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999964
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.2e-17 Score=138.42 Aligned_cols=182 Identities=15% Similarity=0.055 Sum_probs=129.8
Q ss_pred EEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch-----hhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD-----TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+...|++|+||.|+++.. .+.+++.+.+...+.... .+.+|+++|+.+.+ +++++++++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~-------------~~~vP~ll~ 69 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG-------------LPRTPRLLH 69 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC-------------CCCCCEEEE
Confidence 4578999999999998744 677888787775544333 57899999999942 345555554
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC-CCCceEEeechhH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI-KPENILMCVDYDK 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl-kp~NIl~~~~~~~ 183 (393)
. ...+++|+|+ |.+|..... .. ...++.|++.+|+++|.+ ||+|||| ||+|||++.++
T Consensus 70 ~--------~~~~lvmeyI~G~~L~~~~~--------~~-~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g-- 129 (218)
T PRK12274 70 W--------DGRHLDRSYLAGAAMYQRPP--------RG-DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDG-- 129 (218)
T ss_pred E--------cCEEEEEeeecCccHHhhhh--------hh-hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCC--
Confidence 2 1268999999 545543221 11 135788999999999998 9999999 79999997665
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC----------------CCCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA----------------DEIQT 247 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~----------------~~~~t 247 (393)
.++|+|||++........ -...+
T Consensus 130 -----------------------------------------~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~ 168 (218)
T PRK12274 130 -----------------------------------------SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYC 168 (218)
T ss_pred -----------------------------------------CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 499999999874432110 01246
Q ss_pred CCCchhHHHhcC-CCC-chhhHHhHHHHHHHHHhCCCCCCCCC
Q psy12288 248 RQYRSVEVLIGA-GYG-PAADIWSTACMAFELATGDYLFDPKA 288 (393)
Q Consensus 248 ~~y~aPE~~~~~-~~~-~~~DiwSlG~~l~ell~g~~pf~~~~ 288 (393)
+.+++|+...-. ..+ ...+..+.|.-+|.++|+..+..+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 169 PAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred CCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 777788765443 334 45566699999999999998886554
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=8e-17 Score=140.08 Aligned_cols=129 Identities=19% Similarity=0.241 Sum_probs=98.2
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
.+.||+|+||.||. +..++.. +||++... ......+.+|+.+++.+.+.. ..|+||+++++.+....
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~---------~~h~nIvr~yg~~et~~ 74 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRL---------IDWSGIPRYYGTVETDC 74 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccC---------CCCcccceeeEEEEeCC
Confidence 47899999999995 7777666 68987643 223466899999999996533 26899999999887432
Q ss_pred CCCeE-EEEEEeecc---ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHhhhcCCeeeccCCCCceEEeec
Q psy12288 112 RNGTH-ICMVFEVMG---YNLLRLIARSDYKGIHIQNVRTIIKQVLEGL-NYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 112 ~~~~~-~~iv~e~~~---~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l-~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
..+. +.+|+||.| ++|.+++... .+++. ..++.|++.++ +|||++ +|+||||||+||+++..
T Consensus 75 -g~g~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 75 -GTGYVYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRI 141 (210)
T ss_pred -CCeEEEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEecc
Confidence 2234 448999954 7999888653 25544 35678888887 899998 99999999999999754
|
|
| >KOG1033|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.9e-18 Score=158.82 Aligned_cols=175 Identities=25% Similarity=0.359 Sum_probs=131.7
Q ss_pred eEEEEEEeec-cccHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhh
Q psy12288 115 THICMVFEVM-GYNLLRLIAR-SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDAT 192 (393)
Q Consensus 115 ~~~~iv~e~~-~~~l~~~~~~-~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~ 192 (393)
.+++|.|++| ..+|.+++.+ ......+......++.|+..|+.| + |.+|+|+||.||++..+.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~----------- 393 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDD----------- 393 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccch-----------
Confidence 4688999999 5666676653 333346677888999999999999 6 999999999999998776
Q ss_pred cccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---------CCCCCCCCCCCchhHHHhcCCCCc
Q psy12288 193 KHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------HFADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.+++.|||+...... .....+||..||+||.+.+..|+.
T Consensus 394 --------------------------------q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~ 441 (516)
T KOG1033|consen 394 --------------------------------QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSE 441 (516)
T ss_pred --------------------------------hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhh
Confidence 389999998765421 345568999999999999999999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
++||||||++++|++.- |.- ..+..+-..+ .-|.+|+.++..
T Consensus 442 kvdIyaLGlil~EL~~~---f~T--------~~er~~t~~d~r~g~ip~~~~~d-------------------------- 484 (516)
T KOG1033|consen 442 KVDIYALGLILAELLIQ---FST--------QFERIATLTDIRDGIIPPEFLQD-------------------------- 484 (516)
T ss_pred hcchhhHHHHHHHHHHH---hcc--------HHHHHHhhhhhhcCCCChHHhhc--------------------------
Confidence 99999999999999972 110 1112222222 225556544321
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.+.-..|+.+||...|.+||++.+.-.|+|.
T Consensus 485 -------------~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 485 -------------YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred -------------CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 2234589999999999999998888888775
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.4e-17 Score=144.51 Aligned_cols=127 Identities=17% Similarity=0.112 Sum_probs=91.5
Q ss_pred eEEEEEEecccCceEEEEEE-eCCCCceEEEEEEeccccc-------------------------chhhHHHHHHHHHhc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSW-DLQDKTFVALKIVKSDQVY-------------------------ADTARDEIVLLKAVG 82 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~E~~~l~~l~ 82 (393)
-|++.+.||+|++|.||+|. +..+|+.||+|++...... ...+.+|+..++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 6778999999998743210 012457888888884
Q ss_pred ccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeecccc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYN-LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
+. ...+++.+.. . ..++|||++++. +....... ..+...++..++.|++.++++||+
T Consensus 109 ~~------------~i~~p~~~~~------~--~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~ 166 (237)
T smart00090 109 EA------------GVPVPKPIAW------R--RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYK 166 (237)
T ss_pred hc------------CCCCCeeeEe------c--CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHh
Confidence 21 1111222211 1 247999999664 43332222 235566678999999999999999
Q ss_pred cCC-eeeccCCCCceEEe
Q psy12288 162 QCR-IIHTDIKPENILMC 178 (393)
Q Consensus 162 ~~~-i~H~dlkp~NIl~~ 178 (393)
. | ++|+||||+||+++
T Consensus 167 ~-g~iiH~Dikp~NIli~ 183 (237)
T smart00090 167 E-GELVHGDLSEYNILVH 183 (237)
T ss_pred c-CCEEeCCCChhhEEEE
Confidence 8 9 99999999999997
|
|
| >KOG1023|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-16 Score=150.52 Aligned_cols=201 Identities=18% Similarity=0.277 Sum_probs=146.0
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe-eeccCCCC
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI-IHTDIKPE 173 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i-~H~dlkp~ 173 (393)
.|.|+.++++... ++...++|.++| .|+|.+.+.... ..+..-....+++++++||+|+|.. .+ .|+.++..
T Consensus 5 ~h~n~~~f~g~~~----~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s-~i~~hg~l~s~ 78 (484)
T KOG1023|consen 5 DHDNLNKFIGASV----DGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNS-PIGYHGALKSS 78 (484)
T ss_pred chhhhhhheeeEe----cCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcC-cceeeeeeccc
Confidence 7889999999888 567899999999 889998887643 3466667778899999999999987 55 99999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTR 248 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~ 248 (393)
|.+++..+ .+|++|||+...... .........
T Consensus 79 nClvd~~w-------------------------------------------~lklt~~Gl~~~~~~~~~~~~~~~~~~~~ 115 (484)
T KOG1023|consen 79 NCLVDSRW-------------------------------------------VLKLTDFGLNSLLEETAEPEAHHPIRKAL 115 (484)
T ss_pred cceeeeeE-------------------------------------------EEEechhhhcccccccccccccchhHHHH
Confidence 99999998 599999998765432 111112245
Q ss_pred CCchhHHHhcCC-------CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 249 QYRSVEVLIGAG-------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 249 ~y~aPE~~~~~~-------~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
-|.|||.+.... .+.+.|+||+|++++|+++.+-||......... .+.+..+.. .+..
T Consensus 116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~--~eii~~~~~-~~~~------------ 180 (484)
T KOG1023|consen 116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP--DEIILRVKK-GGSN------------ 180 (484)
T ss_pred hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh--HHHHHHHHh-cCCC------------
Confidence 689999998741 367899999999999999999999865544322 222222222 1110
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+++ ......+..+.+..++++||..+|++||+++++-.
T Consensus 181 -~~rP---------------------~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 181 -PFRP---------------------SIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred -CcCc---------------------chhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 0000 00000123346889999999999999999988754
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.3e-16 Score=134.49 Aligned_cols=122 Identities=25% Similarity=0.289 Sum_probs=86.1
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-----------------------chhhHHHHHHHHHhcccCC
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-----------------------ADTARDEIVLLKAVGRKSN 86 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------------------~~~~~~E~~~l~~l~~~~~ 86 (393)
|.+.+.||+|+||.||+|... +++.||||++..+... ......|..++..+.+...
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888999999999999999875 7899999987643210 1124567777777733210
Q ss_pred CCcccccCcccccceeccccceeecCCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
.+++.++ ....+++|||+.+ ++.... . ......++.+++.++.++|+. |+
T Consensus 96 ------------~v~~~~~--------~~~~~lv~e~~~g~~L~~~~-~-------~~~~~~~~~~i~~~l~~lh~~-gi 146 (198)
T cd05144 96 ------------PVPKPID--------WNRHAVVMEYIDGVELYRVR-V-------LEDPEEVLDEILEEIVKAYKH-GI 146 (198)
T ss_pred ------------CCCceee--------cCCceEEEEEeCCcchhhcc-c-------cccHHHHHHHHHHHHHHHHHC-CC
Confidence 1222221 1235899999944 443321 1 134567889999999999998 99
Q ss_pred eeccCCCCceEEeech
Q psy12288 166 IHTDIKPENILMCVDY 181 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~ 181 (393)
+|+||+|+||+++.++
T Consensus 147 ~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 147 IHGDLSEFNILVDDDE 162 (198)
T ss_pred CcCCCCcccEEEcCCC
Confidence 9999999999998765
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6e-15 Score=129.63 Aligned_cols=118 Identities=17% Similarity=0.206 Sum_probs=86.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccccc---------chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---------ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.||+|++|.||+|.. ++..+++|+....... .....+|+.++..+. +++++...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------------~~~i~~p~ 65 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR--------------KAGVNVPA 65 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH--------------HCCCCCCe
Confidence 5789999999999977 6778999976532211 134567888888883 33332222
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
..+. .....+++|||+ |++|.+.+.... . ....++.+++.+|+++|+. |++|+|++|+||+++
T Consensus 66 ~~~~----~~~~~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~ 129 (211)
T PRK14879 66 VYFV----DPENFIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS 129 (211)
T ss_pred EEEE----eCCCCEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE
Confidence 2222 233468999999 667777765421 2 7788999999999999998 999999999999997
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-14 Score=125.22 Aligned_cols=114 Identities=17% Similarity=0.211 Sum_probs=81.1
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.||+|++|.||+|.. ++..|++|....... ...++.+|+.+++.+.+.+. .++..+.
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i------------~~p~~~~ 66 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGV------------NTPVVYD 66 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCC------------CCCEEEE
Confidence 379999999999973 577899998653211 12445679999999843221 1112211
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
. .....+++||++ ++++.+.+.... . .++.+++.+|+++|+. |++|+|++|.||+++
T Consensus 67 --~----~~~~~~lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~ 124 (199)
T TIGR03724 67 --V----DPDNKTIVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR 124 (199)
T ss_pred --E----ECCCCEEEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE
Confidence 1 233457999999 677776654321 1 7899999999999998 999999999999998
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0590|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-16 Score=157.65 Aligned_cols=259 Identities=23% Similarity=0.316 Sum_probs=186.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-CceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-KTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...|.+.+-||+|+|+.|-.+....+ ...+|.|.+.... ........|..+.+.+. .|.|++.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s-------------~h~n~~~ 85 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS-------------KHSNTVH 85 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc-------------ccccccc
Confidence 45788899999999999988877554 3346666554332 22233344555555552 3788888
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLH-TQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH-~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++... .....++++++. +++++..+........+...+-.++.|+..++.|+| .. ++.|+|+||+|.+++..
T Consensus 86 ~~~~~~----~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s 160 (601)
T KOG0590|consen 86 MIEPSS----SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDES 160 (601)
T ss_pred cCCccC----CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccC
Confidence 877665 677889999998 777777763333324677778889999999999999 77 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-C-----CCCCCC-CCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-H-----FADEIQ-TRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~-----~~~~~~-t~~y~aP 253 (393)
+. .++..|||++..... . ....+| ++.|+||
T Consensus 161 ~~------------------------------------------~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~ 198 (601)
T KOG0590|consen 161 GS------------------------------------------ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAP 198 (601)
T ss_pred CC------------------------------------------cccCCCchhhccccccCCcceeeecccCCCCCCCCc
Confidence 52 378999999876543 1 234567 9999999
Q ss_pred HHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|...+.. .....|+||+|+++..+++|..||.......... . .+.. .+.
T Consensus 199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~--------------------------~-~~~~---~~~ 248 (601)
T KOG0590|consen 199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY--------------------------S-SWKS---NKG 248 (601)
T ss_pred ccccchhhcCCCcccccccccccccccCCCCccccccccccc--------------------------e-eecc---ccc
Confidence 9999854 3788999999999999999999996443221000 0 0000 000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
......+...+....+++.++|..+|..|.+.+++-.+||+..
T Consensus 249 -------------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 249 -------------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -------------ccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0001123455667789999999999999999999999999987
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-14 Score=123.88 Aligned_cols=122 Identities=22% Similarity=0.268 Sum_probs=78.8
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhh-------------------------HHHHHHHHHhcccCCC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-------------------------RDEIVLLKAVGRKSNV 87 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------~~E~~~l~~l~~~~~~ 87 (393)
.+.||+|+||.||+|.+. +++.||||++.......... ..|...+..+....
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-- 78 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG-- 78 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence 467999999999999876 78899999887532211111 23344444432110
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeeccc-cHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCC
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLL-RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCR 164 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~-~l~-~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~ 164 (393)
..+++.+.. ...+++|||+++ .+. ..+.... . ..++..++.+++.++.++|. . +
T Consensus 79 ----------~~~~~~~~~--------~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~-~ 135 (187)
T cd05119 79 ----------VPVPKPIDL--------NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREA-G 135 (187)
T ss_pred ----------CCCCceEec--------CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhcc-C
Confidence 111122111 135899999955 211 1111110 1 16678899999999999999 7 9
Q ss_pred eeeccCCCCceEEeech
Q psy12288 165 IIHTDIKPENILMCVDY 181 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~ 181 (393)
++|+||||+||+++ ++
T Consensus 136 ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 136 LVHGDLSEYNILVD-DG 151 (187)
T ss_pred cCcCCCChhhEEEE-CC
Confidence 99999999999998 44
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.2e-14 Score=142.20 Aligned_cols=121 Identities=18% Similarity=0.170 Sum_probs=85.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEE-eccc--------ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQ--------VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~-~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
...|...+.||+|+||.||+|...... +++|.. .... ...+.+.+|+.+++.+ .+
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~~ 395 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEA--------------RR 395 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh--------------cc
Confidence 345567889999999999999765443 344432 1110 1124567899999998 44
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++++....... .....++||||+ +++|.+.+. ....++.+++.+|.+||+. |++||||||+||+
T Consensus 396 ~~i~~p~~~~~----~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NIL 460 (535)
T PRK09605 396 AGVPTPVIYDV----DPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFI 460 (535)
T ss_pred cCCCeeEEEEE----eCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEE
Confidence 44433322222 233467999999 667776653 3467899999999999998 9999999999999
Q ss_pred Ee
Q psy12288 177 MC 178 (393)
Q Consensus 177 ~~ 178 (393)
++
T Consensus 461 l~ 462 (535)
T PRK09605 461 VR 462 (535)
T ss_pred EE
Confidence 94
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-12 Score=116.37 Aligned_cols=125 Identities=16% Similarity=0.134 Sum_probs=80.9
Q ss_pred Eec-ccCceEEEEEEeCCCCceEEEEEEecc--------------cccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 35 KLG-WGHFSTVWLSWDLQDKTFVALKIVKSD--------------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 35 ~lg-~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.|| .|+.|.||.+... +..+++|.+... ......+.+|+.++..+.+.. ..
T Consensus 38 ~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g------------i~ 103 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG------------LP 103 (239)
T ss_pred eeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC------------CC
Confidence 455 6666777777553 667888877431 112345678999999994422 11
Q ss_pred ceeccccceeecCCCeEEEEEEeecc--ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+++.+.............++|||++. .+|.+.+... .++.+ .+.+++.++++||+. ||+|+||||+|||+
T Consensus 104 vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv 175 (239)
T PRK01723 104 VPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILL 175 (239)
T ss_pred CceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEE
Confidence 23344332211111223469999994 4677666432 24443 357899999999998 99999999999999
Q ss_pred eech
Q psy12288 178 CVDY 181 (393)
Q Consensus 178 ~~~~ 181 (393)
+.++
T Consensus 176 ~~~~ 179 (239)
T PRK01723 176 DPDG 179 (239)
T ss_pred cCCC
Confidence 7655
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.44 E-value=1e-12 Score=108.45 Aligned_cols=123 Identities=24% Similarity=0.227 Sum_probs=90.6
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
+++.||+|.++.||++.... ..+++|....... ...+.+|..+++.+.+. ...+++++..+.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~------------~~~~p~~~~~~~--- 63 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK------------GLPVPKVLASGE--- 63 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc------------CCCCCeEEEEcC---
Confidence 45789999999999998753 6789998765433 46788999999999542 123445444443
Q ss_pred CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC--CeeeccCCCCceEEeech
Q psy12288 112 RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC--RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~--~i~H~dlkp~NIl~~~~~ 181 (393)
..+..+++|||+.+...... +......++.+++.+++.+|... +++|+|++|+||+++.++
T Consensus 64 -~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~ 126 (155)
T cd05120 64 -SDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK 126 (155)
T ss_pred -CCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc
Confidence 34678999999955433221 34556678899999999999841 699999999999997644
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0601|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.1e-13 Score=129.57 Aligned_cols=258 Identities=21% Similarity=0.250 Sum_probs=184.2
Q ss_pred ccCCeeCCeEEEEEEecc--cCceEEEEEEe--CCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGW--GHFSTVWLSWD--LQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
....++...+.+...+|. |.+|.||.+.. ..++..+|+|.-+.- ......-.+|+...+.+
T Consensus 107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i------------ 174 (524)
T KOG0601|consen 107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKI------------ 174 (524)
T ss_pred CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccccc------------
Confidence 344566788999999999 99999999988 888889999863321 11122223344333333
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHhhhcCCeeecc
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLE----GLNYLHTQCRIIHTD 169 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~----~l~~lH~~~~i~H~d 169 (393)
..|++.++....+. .++..++-+|.++.++..+...-. ..++...+.....+... ||..+|.. +++|-|
T Consensus 175 -~~~~~~v~~~~~~e----~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~ 247 (524)
T KOG0601|consen 175 -DSHENPVRDSPAWE----GSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDD 247 (524)
T ss_pred -CccccccccCcccc----cCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC-cccccc
Confidence 26777777666665 678899999999988887765432 33777888888888888 99999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC-------
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------- 242 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~------- 242 (393)
+||+||+...++. ..+++|||+...++....
T Consensus 248 ~kp~~i~~~~~~~------------------------------------------s~~~~df~~v~~i~~~~~~~~~~~~ 285 (524)
T KOG0601|consen 248 LKPANIFTTSDWT------------------------------------------SCKLTDFGLVSKISDGNFSSVFKVS 285 (524)
T ss_pred cchhheecccccc------------------------------------------eeecCCcceeEEccCCccccceeee
Confidence 9999999977742 488999998877654321
Q ss_pred -CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCC-CCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 243 -DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPK-AGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 243 -~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~-~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
...+...|++||+..+. ++.+.|++++|.++.+..++..+.... ... ..++.. +.+|.+
T Consensus 286 ~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W~~~r~-----~~ip~e-------- 346 (524)
T KOG0601|consen 286 KRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSS-----WSQLRQ-----GYIPLE-------- 346 (524)
T ss_pred ecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCC-----cccccc-----ccCchh--------
Confidence 11467789999998877 789999999999999998876554321 100 000000 001111
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+...-+..+...+..|+..+|..|++++.+..|+++..
T Consensus 347 ------------------------------~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 347 ------------------------------FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ------------------------------hhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 11223344555889999999999999999999998864
|
|
| >KOG1243|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-11 Score=118.85 Aligned_cols=181 Identities=16% Similarity=0.266 Sum_probs=130.1
Q ss_pred EEEEEEecccCceEEE-EEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 30 YHVIRKLGWGHFSTVW-LSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~-~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
|++ ...+-++.+ +| .|..+.++.+|.|...+.... ..+...+.+.-|+.+ .||+|+++++.+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl--------------RHP~Il~yL~t~ 78 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL--------------RHPNILSYLDTT 78 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhc--------------cCchhhhhhhhh
Confidence 444 444444444 45 466777889999998876543 234466777788888 899999999999
Q ss_pred eeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 108 KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
. ..+..|+|+|.+.. |..++.. +....+.-.+.||+.||.|||+.|+++|++|..+.++|+..+.
T Consensus 79 e----~~~~~ylvTErV~P-l~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge----- 143 (690)
T KOG1243|consen 79 E----EEGTLYLVTERVRP-LETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE----- 143 (690)
T ss_pred c----ccCceEEEeecccc-HHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc-----
Confidence 8 66689999999831 1122222 3356777789999999999998889999999999999988874
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC---CCCCCCCCchhHHHhcCCCCch
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---DEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
.||++|.++........ ....-..|..|+.+.... -.
T Consensus 144 --------------------------------------WkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s 183 (690)
T KOG1243|consen 144 --------------------------------------WKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WS 183 (690)
T ss_pred --------------------------------------EEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cc
Confidence 99999988765432221 111223456666544332 46
Q ss_pred hhHHhHHHHHHHHHhCC
Q psy12288 265 ADIWSTACMAFELATGD 281 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~ 281 (393)
.|.|.||+++++++.|.
T Consensus 184 ~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 184 IDSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhhHHHHHHHHhCcc
Confidence 79999999999999993
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.2e-11 Score=101.42 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=82.0
Q ss_pred EEecccCceEEEEEEeCC------CCceEEEEEEecccc-----------------------cchhhH----HHHHHHHH
Q psy12288 34 RKLGWGHFSTVWLSWDLQ------DKTFVALKIVKSDQV-----------------------YADTAR----DEIVLLKA 80 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~-----------------------~~~~~~----~E~~~l~~ 80 (393)
..||.|.-+.||.|.... .+..+|||+++.+.. ....+. +|...|+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999997653 247899998753110 011122 68888888
Q ss_pred hcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeecccc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYN-LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
+.... -.+++.++. ..-++|||+++++ +....... ..++.++...+..+++.++..+
T Consensus 83 l~~~G------------v~vP~pi~~--------~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l 140 (197)
T cd05146 83 MQKAG------------IPCPEVVVL--------KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQL 140 (197)
T ss_pred HHHcC------------CCCCeEEEe--------cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHH
Confidence 85432 123333332 1257899999653 21111111 1245566778889999999998
Q ss_pred -hhcCCeeeccCCCCceEEeec
Q psy12288 160 -HTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 160 -H~~~~i~H~dlkp~NIl~~~~ 180 (393)
|.. |++|+||++.||++..+
T Consensus 141 ~H~~-glVHGDLs~~NIL~~~~ 161 (197)
T cd05146 141 YKEC-NLVHADLSEYNMLWHDG 161 (197)
T ss_pred HHhC-CeecCCCCHHHEEEECC
Confidence 776 99999999999999643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0601|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.7e-11 Score=117.75 Aligned_cols=254 Identities=17% Similarity=0.113 Sum_probs=172.1
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeC-CCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDL-QDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
....+|..+..||.|+|+.|+.+... .++..+++|.+.+.. .....-..|+.+...+. .|.++
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~-------------~~~~~ 328 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG-------------SHLPS 328 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh-------------ccccc
Confidence 34567999999999999999998655 567788999765431 11223356777777764 55566
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+.....+. .....++--|+| ++++.....- ...+.+...+++..|++.++-++|+. .++|+|++|+||++..
T Consensus 329 ~g~~~~W~----~~r~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~ 401 (524)
T KOG0601|consen 329 VGKNSSWS----QLRQGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISN 401 (524)
T ss_pred CCCCCCcc----ccccccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeecc
Confidence 66555555 333455888899 5544443322 23377888999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCc--hhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR--SVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~--aPE~~~ 257 (393)
++. -.++.|||....+.-......++-.++ ++....
T Consensus 402 ~~~------------------------------------------~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e 439 (524)
T KOG0601|consen 402 DGF------------------------------------------FSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLE 439 (524)
T ss_pred chh------------------------------------------hhhccccccccccceecccccccccccccchhhcc
Confidence 531 256788887654332222222333344 455555
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
...+..++|++|||..+.+.+++...-.....
T Consensus 440 ~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~------------------------------------------------ 471 (524)
T KOG0601|consen 440 DYPHLSKADIFSLGLSVDEAITGSPLSESGVQ------------------------------------------------ 471 (524)
T ss_pred ccccccccccccccccccccccCcccCccccc------------------------------------------------
Confidence 56678999999999999999998653322110
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...++.+..+........+..+.+.+...++..||.+.++..|+=|.....
T Consensus 472 ---~~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~~~ 522 (524)
T KOG0601|consen 472 ---SLTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRDSR 522 (524)
T ss_pred ---ceeeecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhhhcc
Confidence 111122222222344477889999999999999999999999976654433
|
|
| >KOG0606|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.1e-12 Score=127.08 Aligned_cols=281 Identities=20% Similarity=0.217 Sum_probs=172.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+.+.+.+-+-+|.++.++.+.-..++...++|+............ +......++ .++..+|.++.....+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~------~s~r~~s~~----~i~p~~P~v~~~~~s~ 873 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDY------ESIRSKSNI----LITPRSPAVVRSFPSF 873 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccc------cccCCccCc----cccCCCCceecccCCC
Confidence 567788888999999999997777776667776554322111100 111111111 1112344444333332
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. -.....++++|. ++++...+.... +.+.+-++.....+..+.++||.. .+.|+|++|.|++...++...
T Consensus 874 ~----~rsP~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~-- 944 (1205)
T KOG0606|consen 874 P----CRSPLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRP-- 944 (1205)
T ss_pred C----CCCCcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcc--
Confidence 2 344578999999 677777766543 466677777888899999999976 699999999999998776411
Q ss_pred hhhhhhccc---ccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-------CCCCCCCCCCCCchhHHH
Q psy12288 187 MARDATKHH---KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-------DHFADEIQTRQYRSVEVL 256 (393)
Q Consensus 187 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-------~~~~~~~~t~~y~aPE~~ 256 (393)
+..+. +.|... + .....+..+. ...-+++...... .......+|+.|.+||..
T Consensus 945 ----l~~~~t~~~vg~~~-p-------~~~~sg~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~ 1007 (1205)
T KOG0606|consen 945 ----LTDFGTLSKVGLIP-P-------TTDLSGPSSS-----GTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEIL 1007 (1205)
T ss_pred ----cCcccccccccccc-C-------cCCccccccc-----CccccccccccccccccchhhccccccCCCcccCCccc
Confidence 00000 000000 0 0000000000 1111222111111 012234689999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+.....++|+|++|+++++.++|.+||......... +-+... .
T Consensus 1008 lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f----------~ni~~~--------------------------~ 1051 (1205)
T KOG0606|consen 1008 LGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIF----------ENILNR--------------------------D 1051 (1205)
T ss_pred ccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhh----------hccccC--------------------------C
Confidence 9999999999999999999999999999876643211 100000 0
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH---HHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA---DCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~---ell~hp~~~~~ 389 (393)
. .....+...+....+++.+.|..+|.+|..+. ++-.||||.++
T Consensus 1052 ~---------~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1052 I---------PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred C---------CCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 0 00112234567788999999999999999987 99999999875
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=97.70 Aligned_cols=115 Identities=16% Similarity=0.068 Sum_probs=78.7
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++.++.|.++.||++... +..+++|+.............|..+++.+..... +++++...
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~-------------~P~~~~~~----- 62 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGI-------------GPKLYYFD----- 62 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC-------------CCceEEEe-----
Confidence 467889999999999764 7789999876554334456889999999854321 12222221
Q ss_pred CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe-----eeccCCCCceEEe
Q psy12288 113 NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI-----IHTDIKPENILMC 178 (393)
Q Consensus 113 ~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i-----~H~dlkp~NIl~~ 178 (393)
....++|||++.|...... . . .....+.+++.+++.||.. ++ +|+|++|.||+++
T Consensus 63 -~~~~~lv~e~i~G~~l~~~---~---~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~ 122 (170)
T cd05151 63 -PETGVLITEFIEGSELLTE---D---F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD 122 (170)
T ss_pred -CCCCeEEEEecCCCccccc---c---c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE
Confidence 1124689999955432211 0 1 1134567899999999987 74 9999999999998
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.6e-11 Score=116.29 Aligned_cols=137 Identities=19% Similarity=0.321 Sum_probs=76.5
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-----------------------------------cchhhHH
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-----------------------------------YADTARD 73 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------------------~~~~~~~ 73 (393)
.|+. +.||.|++|.||+|+...+|+.||||+....-. ....+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 5666 789999999999999998899999999874310 0111223
Q ss_pred HHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHH--HhcCC--CCCCHHHHHHH
Q psy12288 74 EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLI--ARSDY--KGIHIQNVRTI 148 (393)
Q Consensus 74 E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~--~~~~~--~~l~~~~~~~i 148 (393)
|+.+.+.......+.. .. .+...+.+...+. .-.+..++||||+ |+.+.+.. ..... ..+....+..+
T Consensus 200 ElD~~~Ea~N~~~~~~---~f-~~~~~v~VP~v~~---d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~ 272 (537)
T PRK04750 200 ELDLMREAANASQLRR---NF-EDSDMLYVPEVYW---DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVF 272 (537)
T ss_pred hhCHHHHHHHHHHHHH---Hc-cCCCCeecceeec---ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHH
Confidence 3333333211100000 00 0111122222221 1234568999999 66665532 21110 01333344455
Q ss_pred HHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 149 ~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.|++ .. |++|+|++|.||+++.++
T Consensus 273 ~~Qif-------~~-GffHaDpHPGNIlv~~~g 297 (537)
T PRK04750 273 FTQVF-------RD-GFFHADMHPGNIFVSYDP 297 (537)
T ss_pred HHHHH-------hC-CeeeCCCChHHeEEecCC
Confidence 55554 35 999999999999998765
|
|
| >KOG1266|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-10 Score=104.32 Aligned_cols=200 Identities=17% Similarity=0.176 Sum_probs=132.6
Q ss_pred ccccceeccccceeecC-CCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcC-CeeeccC
Q psy12288 96 ASEKVIRLLNDFKIYSR-NGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQC-RIIHTDI 170 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~-~i~H~dl 170 (393)
.|.|++++..++..... +......++||+ .|++..++.+-. ...+......+++.||+.||.|||+-- .++|+++
T Consensus 125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgnl 204 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNL 204 (458)
T ss_pred HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCc
Confidence 68889998888874433 445688899999 788887776532 234677788899999999999999742 4899999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--------CCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--------DHFA 242 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--------~~~~ 242 (393)
.-+-|++..++- +|+ |.+.-.... ....
T Consensus 205 Tc~tifiq~ngL-------------------------------------------Iki-g~~ap~s~h~s~~~~~~~Ek~ 240 (458)
T KOG1266|consen 205 TCDTIFIQHNGL-------------------------------------------IKI-GSVAPDSTHPSVNSTREAEKS 240 (458)
T ss_pred chhheeecCCce-------------------------------------------EEe-cccCccccchhhhhhhHhhhh
Confidence 999999875441 222 211100000 0111
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCC-CCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~p-f~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
-..+-++|.+||.-..-..+.++|||++|....+|..+..- -.+.+..+ ..+..+.. .
T Consensus 241 ~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~---~ee~ia~~--i---------------- 299 (458)
T KOG1266|consen 241 VNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVE---VEENIANV--I---------------- 299 (458)
T ss_pred ccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceee---hhhhhhhh--e----------------
Confidence 22346788899877666678899999999999999988653 22222111 00000000 0
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
+ ..+...-.+++++||.-.|..||++++++.||.+-++.
T Consensus 300 ---------------------------~---~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 300 ---------------------------I---GLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred ---------------------------e---eccCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 0 00111223789999999999999999999999876554
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.8e-10 Score=108.81 Aligned_cols=136 Identities=19% Similarity=0.257 Sum_probs=77.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccC----C----C------------------
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS----N----V------------------ 87 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~----~----~------------------ 87 (393)
+.||.|++|.||+|... +|+.||||+.... ..+.+..++.+++.+...- . .
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~--i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 199 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPG--IEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD 199 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCC--cHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence 56999999999999765 7899999997642 2334444444444321000 0 0
Q ss_pred -------Cccc-ccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHH
Q psy12288 88 -------HSSA-YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLE-GLN 157 (393)
Q Consensus 88 -------~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~-~l~ 157 (393)
.... -....+++ +.+...+.. ..+..++||||+ |.++.+...... ... ....++.+++. .+.
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~-v~vP~v~~~---~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 200 LRREAANASELGENFKNDPG-VYVPEVYWD---RTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLN 271 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCC-EEeCCEehh---hcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHH
Confidence 0000 00011121 222222221 123468999999 556655443211 112 22345555555 367
Q ss_pred HhhhcCCeeeccCCCCceEEeech
Q psy12288 158 YLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 158 ~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
.+|.. |++|+|++|.||+++.++
T Consensus 272 ql~~~-g~~H~D~hPgNilv~~~g 294 (437)
T TIGR01982 272 QVLRD-GFFHADLHPGNIFVLKDG 294 (437)
T ss_pred HHHhC-CceeCCCCcccEEECCCC
Confidence 78887 999999999999997765
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG3087|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.2e-09 Score=86.50 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=88.7
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEE-Eecc--------cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKI-VKSD--------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~-~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
....+-+|+-+.|+++.. .|+.+.||. +.+. .....+..+|..+|..+..-.. ..|.+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI---------~~P~l-- 77 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGI---------PAPRL-- 77 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCceE--
Confidence 467889999999999955 577777773 3221 2224566779998888843321 22221
Q ss_pred ccccceeecCCCeEEEEEEeeccc--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGY--NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+ |. +...-.|+||++.| ++.+++...............++..+-..+.-||.+ +++|+||..+||++..+
T Consensus 78 -~--~~----D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~ 149 (229)
T KOG3087|consen 78 -I--FI----DTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSD 149 (229)
T ss_pred -E--EE----ecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecC
Confidence 1 11 22234688999966 777777664433233333367889999999999998 99999999999999877
Q ss_pred hh
Q psy12288 181 YD 182 (393)
Q Consensus 181 ~~ 182 (393)
+.
T Consensus 150 ~~ 151 (229)
T KOG3087|consen 150 GN 151 (229)
T ss_pred CC
Confidence 64
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-08 Score=86.89 Aligned_cols=114 Identities=24% Similarity=0.275 Sum_probs=68.4
Q ss_pred EEEEEEeCCCCceEEEEEEeccccc---------------------------chhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 43 TVWLSWDLQDKTFVALKIVKSDQVY---------------------------ADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 43 ~V~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
.||.|... .+..+|+|+.+..... .....+|...|..+....
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G---------- 69 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG---------- 69 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT----------
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC----------
Confidence 37888664 5678999987531100 123356888888885432
Q ss_pred ccccceeccccceeecCCCeEEEEEEeecc--ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-hhhcCCeeeccCCC
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY-LHTQCRIIHTDIKP 172 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~-lH~~~~i~H~dlkp 172 (393)
-++++.++.- .-++||||++ |..+..+.... ++.+....++.+++..+.. +|.. |++|+||.+
T Consensus 70 --v~vP~p~~~~--------~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~ 135 (188)
T PF01163_consen 70 --VPVPKPYDYN--------RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSE 135 (188)
T ss_dssp ---SS--EEEEE--------TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-ST
T ss_pred --ccCCcEEEEe--------CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhc-CceecCCCh
Confidence 1233333221 1469999997 65554444432 2245667788888886666 4665 999999999
Q ss_pred CceEEeech
Q psy12288 173 ENILMCVDY 181 (393)
Q Consensus 173 ~NIl~~~~~ 181 (393)
.||+++.+.
T Consensus 136 ~NIlv~~~~ 144 (188)
T PF01163_consen 136 YNILVDDGK 144 (188)
T ss_dssp TSEEEETTC
T ss_pred hhEEeecce
Confidence 999997663
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG3741|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.6e-07 Score=86.84 Aligned_cols=169 Identities=16% Similarity=0.190 Sum_probs=125.2
Q ss_pred ceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEE
Q psy12288 41 FSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICM 119 (393)
Q Consensus 41 ~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i 119 (393)
..+.|+|+...+|..+++|+++... ......-.-++..+++ .|.|++++.++|....-.+..+++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl--------------~h~NvV~frevf~t~tF~D~Slvl 354 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL--------------CHTNVVPFREVFLTYTFGDLSLVL 354 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh--------------ccCceeehhhhhhhhccCcceEEE
Confidence 3578999999999999999985332 1223445567788888 899999999999866667788999
Q ss_pred EEeec--cccHHHHHHhc-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 120 VFEVM--GYNLLRLIARS-------------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 120 v~e~~--~~~l~~~~~~~-------------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
|++|. .++|.++.-.. .+...++..++.++.|+..||.++|+. |+..+-|.+.+|+++.+.
T Consensus 355 vYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~--- 430 (655)
T KOG3741|consen 355 VYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKM--- 430 (655)
T ss_pred EEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcc---
Confidence 99998 45676655321 123366889999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCch
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 264 (393)
+++++..|..-...... . +.+.+ -..
T Consensus 431 ----------------------------------------RIriS~C~i~Dvl~~d~---------~--~~le~---~Qq 456 (655)
T KOG3741|consen 431 ----------------------------------------RIRISGCGIMDVLQEDP---------T--EPLES---QQQ 456 (655)
T ss_pred ----------------------------------------eEEEecccceeeecCCC---------C--cchhH---Hhh
Confidence 47776655433221111 0 11111 246
Q ss_pred hhHHhHHHHHHHHHhCC
Q psy12288 265 ADIWSTACMAFELATGD 281 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~ 281 (393)
-|.-.||.+++.|.+|.
T Consensus 457 ~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 457 NDLRDLGLLLLALATGT 473 (655)
T ss_pred hhHHHHHHHHHHHhhcc
Confidence 79999999999999984
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.5e-08 Score=81.99 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=76.2
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEE-Eeccc--------ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKI-VKSDQ--------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~-~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.+++|+-+.++.+... |..+++|. .++.- ....+..+|..++..+..... ..| -++
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV---------~~P---~v~ 67 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGV---------PVP---IVY 67 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCC---------CCC---eEE
Confidence 45789999999998553 44477774 22211 112445678888888754321 122 122
Q ss_pred ccceeecCCCeEEEEEEeeccccHHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLR-LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~-~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++ +.+.-.|+|||++|.++. .+... ...++..+-.-+.-||.. ||+|+||.++||++..+.
T Consensus 68 dv------D~~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~ 129 (204)
T COG3642 68 DV------DPDNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR 129 (204)
T ss_pred EE------cCCCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc
Confidence 11 233357999999776666 44332 134566666778889998 999999999999997654
|
|
| >KOG2137|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-09 Score=105.74 Aligned_cols=152 Identities=18% Similarity=0.310 Sum_probs=109.3
Q ss_pred HHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEee
Q psy12288 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230 (393)
Q Consensus 151 ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~d 230 (393)
++..|+.|+|...++||++|.|++|.++.++ .+|++.
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~-------------------------------------------~wkl~G 143 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANG-------------------------------------------DWKLAG 143 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCc-------------------------------------------ceeecc
Confidence 3448999999988899999999999998777 389999
Q ss_pred cCccccccCCCC------------CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHH-hCCCCCCCCCCCCCCCcHH
Q psy12288 231 LGNACWIDDHFA------------DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELA-TGDYLFDPKAGKEYSRDDD 297 (393)
Q Consensus 231 fg~~~~~~~~~~------------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell-~g~~pf~~~~~~~~~~~~~ 297 (393)
|+.+........ -......|.|||++.....+.++|++|+||++|-+. .|+..+...+...++.
T Consensus 144 f~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~--- 220 (700)
T KOG2137|consen 144 FSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS--- 220 (700)
T ss_pred chhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh---
Confidence 987654322110 012245799999999977899999999999999998 5776665443221110
Q ss_pred HHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH
Q psy12288 298 HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377 (393)
Q Consensus 298 ~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 377 (393)
.....+.. .....+...+.++.+-+.++|..++..||++
T Consensus 221 ----~~~~~~~~-------------------------------------~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 221 ----FSRNLLNA-------------------------------------GAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred ----hhhccccc-------------------------------------ccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 00000000 0011224566788899999999999999999
Q ss_pred HHHhcCCCCCCC
Q psy12288 378 ADCLRHPWLNPR 389 (393)
Q Consensus 378 ~ell~hp~~~~~ 389 (393)
.+++..|||.+.
T Consensus 260 ~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 260 DLLLSIPFFSDP 271 (700)
T ss_pred hhhhcccccCCc
Confidence 999999999874
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.74 E-value=9.8e-08 Score=84.15 Aligned_cols=111 Identities=18% Similarity=0.127 Sum_probs=67.5
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
+.|+.|.++.||++.... |+.+++|+...... ....+..|..+++.+.... ..+++++.......
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~------------~~vp~~~~~~~~~~ 70 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTG------------VPVPKVLALCEDPS 70 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCC------------CCCCCEEEECCCCC
Confidence 678999999999997643 57899998765433 3567889999999995421 11233333322100
Q ss_pred CCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 112 RNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
..+..+++||++.| ++...+.. ..++.+....++.+++.+|+.||+
T Consensus 71 -~~~~~~~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~ 117 (223)
T cd05154 71 -VLGTPFYVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHS 117 (223)
T ss_pred -ccCCceEEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 11356899999944 33332211 124555555666666666666663
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.8e-07 Score=80.37 Aligned_cols=126 Identities=21% Similarity=0.255 Sum_probs=82.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchh-------------------------hHHHHHHHHHhcccCCC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADT-------------------------ARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------~~~E~~~l~~l~~~~~~ 87 (393)
...|.+|.-+.||+|.. .++..+|+|+++........ ..+|+.-|+++...
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA--- 128 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA--- 128 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 34777888889999955 46788999998753322111 12366666666432
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
+-.+++.+..+. ..+|||++|..-... .....-++..+++..+..+++..+.-|...+++||
T Consensus 129 ---------GVrvP~Pi~~~~--------nVLvMEfIg~~g~pA-P~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVH 190 (268)
T COG1718 129 ---------GVRVPEPIAFRN--------NVLVMEFIGDDGLPA-PRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVH 190 (268)
T ss_pred ---------CCCCCCceeecC--------CeEEEEeccCCCCCC-CCcccCCcCchhHHHHHHHHHHHHHHHHHhcCccc
Confidence 223344444333 579999996551111 01111123444688899999999999998569999
Q ss_pred ccCCCCceEEeec
Q psy12288 168 TDIKPENILMCVD 180 (393)
Q Consensus 168 ~dlkp~NIl~~~~ 180 (393)
+||+.=|||+..+
T Consensus 191 gDLSEyNiL~~~~ 203 (268)
T COG1718 191 GDLSEYNILVHDG 203 (268)
T ss_pred ccchhhheEEECC
Confidence 9999999999843
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.1e-06 Score=79.58 Aligned_cols=121 Identities=13% Similarity=-0.030 Sum_probs=76.9
Q ss_pred EEEEEeCCCCceEEEEEEeccc------------ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee-e
Q psy12288 44 VWLSWDLQDKTFVALKIVKSDQ------------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI-Y 110 (393)
Q Consensus 44 V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 110 (393)
|.++.. .|+.+.||...... .....+.+|...+..+..... .. ++.+..... .
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GI---------pt---P~pVa~~e~~~ 103 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGV---------DT---MTGVAFGERGS 103 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCC---------CC---CCeeEEEEecC
Confidence 445432 45678888664321 011136788888888854321 11 222222221 1
Q ss_pred cCCCeEEEEEEeeccc--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 111 SRNGTHICMVFEVMGY--NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+.....-++|||++++ ++.+++........+......++.+++..++-||.. |++|+|+++.|||++.
T Consensus 104 ~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~-Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 104 NPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA-GINHRDCYICHFLLHL 173 (268)
T ss_pred CCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCccCCCChhhEEEec
Confidence 1113356799999955 566666432223355677788999999999999998 9999999999999975
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.1e-07 Score=79.16 Aligned_cols=125 Identities=24% Similarity=0.248 Sum_probs=82.7
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-----------------------cccchhhHHHHHHHHHhcccCC
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-----------------------QVYADTARDEIVLLKAVGRKSN 86 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------------~~~~~~~~~E~~~l~~l~~~~~ 86 (393)
+.+...||-|.-+.||.|.+. .|.++|||+-... .......++|..+|..+....
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G- 170 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG- 170 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC-
Confidence 567899999999999999776 6778999974311 011234567888999884331
Q ss_pred CCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
-.+++.+ ..+..++|||++.|..+.... +..+....++..|+.-+.-+... |++
T Consensus 171 -----------~~VP~P~--------~~nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~-GiV 224 (304)
T COG0478 171 -----------VKVPKPI--------AWNRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRR-GIV 224 (304)
T ss_pred -----------CCCCCcc--------ccccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHc-Ccc
Confidence 1122222 345578999999664332221 22344444555555556555555 999
Q ss_pred eccCCCCceEEeechh
Q psy12288 167 HTDIKPENILMCVDYD 182 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~ 182 (393)
|+|+++=||+++.|+.
T Consensus 225 HGDlSefNIlV~~dg~ 240 (304)
T COG0478 225 HGDLSEFNILVTEDGD 240 (304)
T ss_pred ccCCchheEEEecCCC
Confidence 9999999999999874
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.6e-06 Score=71.81 Aligned_cols=130 Identities=13% Similarity=0.038 Sum_probs=88.8
Q ss_pred cccCceEEEEEEeCCCCceEEEEEEec----c---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccccee
Q psy12288 37 GWGHFSTVWLSWDLQDKTFVALKIVKS----D---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKI 109 (393)
Q Consensus 37 g~G~~g~V~~~~~~~~~~~vaiK~~~~----~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (393)
|+||-+-|++.... |+.+=+|.-.+ + +.-...+.+|+..++.+.... .| +++....-..
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~G-----------vP-VP~pvf~~~~ 92 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAG-----------VI-VPKIVFGEAV 92 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcC-----------CC-CCccceeeee
Confidence 55888888887543 33566775431 1 334577899999999985542 22 3333311111
Q ss_pred ecCCCeEEEEEEeecc--ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 110 YSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 110 ~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..+.....+||+|-++ .+|.+.+........+......+..+++..++-||+. |+.|+|+-+.||+++.++
T Consensus 93 k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~-Gv~Hgdly~khIll~~~g 165 (216)
T PRK09902 93 KIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV-NRQHGCCYVRHIYVKTEG 165 (216)
T ss_pred ccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHhheeecCCC
Confidence 1223445789999886 5777776554434456777789999999999999998 999999999999997443
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.9e-06 Score=78.93 Aligned_cols=191 Identities=13% Similarity=0.115 Sum_probs=122.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee----ccccce
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR----LLNDFK 108 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~----~~~~~~ 108 (393)
..-||+|+-+.+|..-.. +.. +.|++...+. ..-.+.+..|...- .|+.+.. ... .
T Consensus 16 gr~LgqGgea~ly~l~e~--~d~-VAKIYh~Ppp--a~~aqk~a~la~~p-------------~~p~~~~rvaWPqa--~ 75 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--RDQ-VAKIYHAPPP--AAQAQKVAELAATP-------------DAPLLNYRVAWPQA--T 75 (637)
T ss_pred CccccCCccceeeecchh--hch-hheeecCCCc--hHHHHHHHHhccCC-------------CCcchhhhhcccHH--H
Confidence 467899999999976332 223 3477764331 11222333333332 2222111 111 1
Q ss_pred eecCCCeE-EEEEEeeccc--cHHHHH----HhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 109 IYSRNGTH-ICMVFEVMGY--NLLRLI----ARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 109 ~~~~~~~~-~~iv~e~~~~--~l~~~~----~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+... .-+.|+.+.+ ....+. .+.......++...+..+.++.+.+.||+. |.+-+|+.++|+|+++++
T Consensus 76 L~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~-Gh~vGDVn~~~~lVsd~~ 154 (637)
T COG4248 76 LHGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH-GHVVGDVNQNSFLVSDDS 154 (637)
T ss_pred hhCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc-CCcccccCccceeeecCc
Confidence 13333333 5677887733 222221 122334467888999999999999999998 999999999999999887
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccc--ccCCCCCCCCCCCCchhHHHhc-
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW--IDDHFADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~--~~~~~~~~~~t~~y~aPE~~~~- 258 (393)
. +.|.|-..-.. .+......+|...|.+||...-
T Consensus 155 ~-------------------------------------------V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~ 191 (637)
T COG4248 155 K-------------------------------------------VVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLP 191 (637)
T ss_pred e-------------------------------------------EEEEcccceeeccCCceEecccCccccCCHHHhccc
Confidence 3 77777543221 1223445678999999998762
Q ss_pred ----CCCCchhhHHhHHHHHHHHHhC-CCCCCCC
Q psy12288 259 ----AGYGPAADIWSTACMAFELATG-DYLFDPK 287 (393)
Q Consensus 259 ----~~~~~~~DiwSlG~~l~ell~g-~~pf~~~ 287 (393)
..-+...|.+.||+++++++.| +.||.+.
T Consensus 192 sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 192 SFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred cccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 2346789999999999999986 8999654
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.7e-06 Score=71.77 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=68.6
Q ss_pred chhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccc--cHHHHHHhcCCCCCCHHHH
Q psy12288 68 ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY--NLLRLIARSDYKGIHIQNV 145 (393)
Q Consensus 68 ~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~l~~~~~ 145 (393)
..+..+|...+..+..... .+++.+.............++|+|.+.+ +|.+.+..... .+....
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi------------~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~ 120 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGI------------PTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQR 120 (206)
T ss_pred chHHHHHHHHHHHHHHcCC------------CCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhH
Confidence 4567788888888754321 1233333333221122456899999943 56666654322 556777
Q ss_pred HHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 146 ~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..++.++...++-||+. |++|+|+++.|||++.+.
T Consensus 121 ~~ll~~l~~~i~~lH~~-gi~H~Dl~~~NILv~~~~ 155 (206)
T PF06293_consen 121 RELLRALARLIAKLHDA-GIYHGDLNPSNILVDPDD 155 (206)
T ss_pred HHHHHHHHHHHHHHHHC-cCCCCCCCcccEEEeCCC
Confidence 88999999999999998 999999999999998765
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG0576|consensus | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.6e-07 Score=89.83 Aligned_cols=258 Identities=18% Similarity=0.156 Sum_probs=163.8
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
+++|.|..+.|-- .-|.....+++|+++.+++.+...+...+ .+++... ....-++++|.++
T Consensus 229 kS~~qpp~lkDk~-kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~------------ 290 (829)
T KOG0576|consen 229 KSGFQPPTLKDKT-KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKV------------ 290 (829)
T ss_pred ccCCCCCcccCCc-cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHc------------
Confidence 3556666665532 24566677899999999998776555444 5655432 4556788889998
Q ss_pred Cccccc-ceeccccceeecCCCeEEEEEEeecccc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 94 TQASEK-VIRLLNDFKIYSRNGTHICMVFEVMGYN--LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 94 ~~~~~~-i~~~~~~~~~~~~~~~~~~iv~e~~~~~--l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
+||| .+..++... ...+.++.++++++. ......... -.+..-++..+.+.-+++++++|+. -=+|+|
T Consensus 291 --n~P~~~v~~~~d~~----~E~~~~i~~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~-~~~~~d- 361 (829)
T KOG0576|consen 291 --NNPNPVVRYLEDYD----GEDYLWIPMRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSS-YKVHRD- 361 (829)
T ss_pred --cCCCCcccccccCC----cccccchhhhhhcCCccccccCChhh-Hhhhhhhhhhhhhhhcccccccccc-cccCcc-
Confidence 6666 444444443 567889999999433 332221111 1133334555677777888999975 457887
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTR 248 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~ 248 (393)
||+..... .++.+|+....+... .....+++
T Consensus 362 ---~~l~s~~~--------------------------------------------~~~~~~~v~~~L~~~~~~~t~~~~~ 394 (829)
T KOG0576|consen 362 ---NILGSEEE--------------------------------------------VKLLDFAVPPQLTRTMKPRTAIGTP 394 (829)
T ss_pred ---cccccccc--------------------------------------------cccccccCCcccCcccccccCCCCC
Confidence 77764432 778899887766544 44567899
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC-hHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP-KEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p-~~~~~~~~~~~~~~~~~ 327 (393)
.+++||+.....+....|+|++|+--.++.-|.+|-....... ...|.-| ...+.....
T Consensus 395 ~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~------------~~~g~~p~s~~L~~~~a-------- 454 (829)
T KOG0576|consen 395 EPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAVL------------PMIGNGPNSPMLTDKSA-------- 454 (829)
T ss_pred CCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCcccc------------CCCCCCCCccccchhhh--------
Confidence 9999999999999999999999987777777766553211000 0001111 000000000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
+...... ++-..|+.--|..|+....++-|.+|+.|.-
T Consensus 455 -----------------------w~~~~~~---~~~~~~~~g~P~~pkv~mgacfsKvfngCpl 492 (829)
T KOG0576|consen 455 -----------------------WSPVFHR---DFPAPCLNGLPPTPKVHMGACFSKVFNGCPL 492 (829)
T ss_pred -----------------------cCccccc---CCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence 0000000 4678899999999999999999999998753
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.1e-05 Score=66.31 Aligned_cols=133 Identities=16% Similarity=0.143 Sum_probs=75.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch----------hhHHHHHHHHHhcccCCCCcccccC
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----------TARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
.++.+|.+.+++-......|.+. ...++.+++|.........+ ...+.+.-+..+....
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g--------- 96 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEG--------- 96 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcC---------
Confidence 45678999999988887777666 33567888997664321111 1122333233331111
Q ss_pred cccccceeccc-cceeecCCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 95 QASEKVIRLLN-DFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 95 ~~~~~i~~~~~-~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
......++- .-.-...-....+++|||+.| .+.+... +.+ .+...+..++.-+|+. |++|+|..|
T Consensus 97 --~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~-G~~HGD~hp 163 (229)
T PF06176_consen 97 --FTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKH-GFYHGDPHP 163 (229)
T ss_pred --ccccccceeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHc-CCccCCCCc
Confidence 111111000 000011123446789999954 4443321 222 2345566778999998 999999999
Q ss_pred CceEEeech
Q psy12288 173 ENILMCVDY 181 (393)
Q Consensus 173 ~NIl~~~~~ 181 (393)
.|++++.++
T Consensus 164 gNFlv~~~~ 172 (229)
T PF06176_consen 164 GNFLVSNNG 172 (229)
T ss_pred CcEEEECCc
Confidence 999998665
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.3e-05 Score=78.72 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=71.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc------------------------
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS------------------------ 89 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~------------------------ 89 (393)
+-|+.++-|.||+|+... |+.||||+...+ ..+.+...+.+|+.+..--....
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPg--i~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPG--IRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCC--hHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 578899999999997764 999999997642 22333333333332211100000
Q ss_pred ----------ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q psy12288 90 ----------SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 90 ----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~ 158 (393)
..-...+.+.+ ++-.++- .-.+.-+++|||+ |..+.+...... .+++.+.+.....++..---+
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v-~VP~V~w---e~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q~~ 282 (517)
T COG0661 208 YRREAANAERFRENFKDDPDV-YVPKVYW---EYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQLL 282 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCe-Eeceeeh---hccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 00000011211 1111111 1233468999999 445444432221 335544443333322222222
Q ss_pred hhhcCCeeeccCCCCceEEeech
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
- . |..|.|..|.||+++.++
T Consensus 283 ~--d-gffHaDpHpGNi~v~~~g 302 (517)
T COG0661 283 R--D-GFFHADPHPGNILVRSDG 302 (517)
T ss_pred h--c-CccccCCCccceEEecCC
Confidence 2 3 999999999999998886
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00052 Score=60.74 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=45.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..... ..| +.+.... .
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~gl---------pvP---~~~~~~~----~ 65 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGI---------PTP---HPFDLVE----D 65 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCC---------CCC---ceEEEEe----c
Confidence 67899999999984 24457788876432 34567899999999853221 112 2222222 3
Q ss_pred CeEEEEEEeeccc
Q psy12288 114 GTHICMVFEVMGY 126 (393)
Q Consensus 114 ~~~~~iv~e~~~~ 126 (393)
+....++||++.|
T Consensus 66 ~~~~glv~e~i~G 78 (226)
T TIGR02172 66 GGRLGLIYELIVG 78 (226)
T ss_pred CCeeeeeeeecCC
Confidence 3346689999955
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0002 Score=59.46 Aligned_cols=115 Identities=20% Similarity=0.154 Sum_probs=72.0
Q ss_pred EEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceee
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 110 (393)
++.+.|++|++|.||+|.+. +..+|+|+-.. +.....+..|..+|..+...... ++++..-
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~-------------p~vy~yg--- 85 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGVT-------------PEVYFYG--- 85 (201)
T ss_pred hhhhhhhcccccEEEEeecc--CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCCC-------------ceEEEec---
Confidence 46778999999999999764 55899996543 45678889999999998433211 1222111
Q ss_pred cCCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC--CceEEee
Q psy12288 111 SRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP--ENILMCV 179 (393)
Q Consensus 111 ~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp--~NIl~~~ 179 (393)
.-++.|||+.| .|....... ..+. ...+++. +|.=+..||-|+.|.- .|+++..
T Consensus 86 -----~~~i~me~i~G~~L~~~~~~~-----~rk~----l~~vlE~-a~~LD~~GI~H~El~~~~k~vlv~~ 142 (201)
T COG2112 86 -----EDFIRMEYIDGRPLGKLEIGG-----DRKH----LLRVLEK-AYKLDRLGIEHGELSRPWKNVLVND 142 (201)
T ss_pred -----hhhhhhhhhcCcchhhhhhcc-----cHHH----HHHHHHH-HHHHHHhccchhhhcCCceeEEecC
Confidence 13455999955 665554321 1222 2334444 3333344999999986 5676644
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00096 Score=58.93 Aligned_cols=78 Identities=19% Similarity=0.123 Sum_probs=51.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++.++.|..+.||++.... ..+++|+.... ........|..+++.+..... .+++++... ....
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~------------pvP~~~~~~-~~~~ 65 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGI------------PVPRVLAFD-TSDE 65 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTS------------BS--EEEEE-EETE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCC------------CCceEEeec-cccc
Confidence 4788999999999997765 47889987654 345677899999988854321 123333321 1112
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
.....+++|+++.|
T Consensus 66 ~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 66 FNGFPYLLMEYIPG 79 (239)
T ss_dssp ETSEEEEEEEEESS
T ss_pred ccccceEEEEEecc
Confidence 33458899999844
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0013 Score=56.42 Aligned_cols=122 Identities=22% Similarity=0.261 Sum_probs=80.1
Q ss_pred CCeEEEEEEecccCc-eEEEEEEeCCCCceEEEEEEec----cc------------------ccchhhHHHHHHHHHhcc
Q psy12288 27 NFRYHVIRKLGWGHF-STVWLSWDLQDKTFVALKIVKS----DQ------------------VYADTARDEIVLLKAVGR 83 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~----~~------------------~~~~~~~~E~~~l~~l~~ 83 (393)
+.+++.++.||.|+- |.||+++. .|+.+|+|++.. .. ....-+..|.++..++..
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 478999999999999 99999965 577999999431 00 122345667777776654
Q ss_pred cCCCCcccccCcccccc--eeccccceeec--------------CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHH
Q psy12288 84 KSNVHSSAYNTQASEKV--IRLLNDFKIYS--------------RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147 (393)
Q Consensus 84 ~~~~~~~~~~~~~~~~i--~~~~~~~~~~~--------------~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~ 147 (393)
.. ++.+ +++++.+.+.. .......||.|+....- .+..+.
T Consensus 114 ~~-----------~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~--- 169 (207)
T PF13095_consen 114 AG-----------REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRD--- 169 (207)
T ss_pred cc-----------ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhH---
Confidence 32 2233 45555443321 22334567888763332 133333
Q ss_pred HHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 148 IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 148 i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+.+++.-+..+|.. ||+-+|+++.|..
T Consensus 170 -~~~~~~dl~~~~k~-gI~~~Dv~~~ny~ 196 (207)
T PF13095_consen 170 -IPQMLRDLKILHKL-GIVPRDVKPRNYR 196 (207)
T ss_pred -HHHHHHHHHHHHHC-CeeeccCcccccc
Confidence 35566778889986 9999999999996
|
|
| >KOG2270|consensus | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00077 Score=62.45 Aligned_cols=127 Identities=18% Similarity=0.234 Sum_probs=82.5
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----------------------c---hhh--HHHHHHHHHhccc
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----------------------A---DTA--RDEIVLLKAVGRK 84 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------------------~---~~~--~~E~~~l~~l~~~ 84 (393)
+-..|..|.-+.||.|.. .+|..+|||+++.+-.. . -.. ..|.+-|+++...
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 446788899999999844 46777999998642100 0 111 2366666666333
Q ss_pred CCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
.. .+|-.+- -...++||+++|.+-+..-.-. .-.++...+..+-.|++.-+..|...|+
T Consensus 227 GI---------P~PePIl-----------Lk~hVLVM~FlGrdgw~aPkLK-d~~ls~~ka~~~Y~~~v~~MR~lY~~c~ 285 (520)
T KOG2270|consen 227 GI---------PCPEPIL-----------LKNHVLVMEFLGRDGWAAPKLK-DASLSTSKARELYQQCVRIMRRLYQKCR 285 (520)
T ss_pred CC---------CCCCcee-----------eecceEeeeeccCCCCcCcccc-cccCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 1111100 0125799999975433322111 1237777888899999999999999999
Q ss_pred eeeccCCCCceEEeec
Q psy12288 165 IIHTDIKPENILMCVD 180 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~ 180 (393)
+||.||+-=|+|+-.+
T Consensus 286 LVHADLSEfN~LyhdG 301 (520)
T KOG2270|consen 286 LVHADLSEFNLLYHDG 301 (520)
T ss_pred eeccchhhhhheEECC
Confidence 9999999999998544
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0018 Score=57.91 Aligned_cols=71 Identities=15% Similarity=0.050 Sum_probs=44.2
Q ss_pred EecccCc-eEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 35 KLGWGHF-STVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 35 ~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
.|-.|.+ +.||++... +..+.+|+..... .....+|+.+++.+... .-+++++.... .
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-------------~~vP~v~~~~~----~ 63 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-------------LPVPEVIDYGS----D 63 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-------------CCCCeEEEEEe----c
Confidence 3444554 678998543 3568888776433 45678899999998532 11233343332 2
Q ss_pred CeEEEEEEeeccc
Q psy12288 114 GTHICMVFEVMGY 126 (393)
Q Consensus 114 ~~~~~iv~e~~~~ 126 (393)
++..++||+++.|
T Consensus 64 ~~~~~lv~e~i~G 76 (244)
T cd05150 64 DGRAWLLTSAVPG 76 (244)
T ss_pred CCccEEEEEeeCC
Confidence 3457889999844
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >KOG1035|consensus | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00033 Score=73.31 Aligned_cols=162 Identities=21% Similarity=0.341 Sum_probs=99.0
Q ss_pred ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC---ceEEeechhHHhHhhhhhhcccccCCcCC
Q psy12288 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE---NILMCVDYDKVRRMARDATKHHKIGMKLP 202 (393)
Q Consensus 126 ~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~---NIl~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (393)
.++...+..- ...+.+..+.+..++.+|++++|+. .+.|.-+..+ +-.++.++
T Consensus 271 ~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~~-~l~~v~L~~s~~~~~~~~~e~--------------------- 326 (1351)
T KOG1035|consen 271 VELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHSL-SLEHVVLSASSSKESTVDGEG--------------------- 326 (1351)
T ss_pred cchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHHh-ccceeEEecccccccccCccc---------------------
Confidence 3444444333 3477889999999999999999986 4444433333 11111111
Q ss_pred CCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCC--CCCCCCCCchhHHHhcCCC--CchhhHHhHHHHHHHHH
Q psy12288 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGY--GPAADIWSTACMAFELA 278 (393)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~--~~~~DiwSlG~~l~ell 278 (393)
.....+.||+.+..+..... ....+..+.++|....... ....|+|.+|.++..+.
T Consensus 327 --------------------~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~ 386 (1351)
T KOG1035|consen 327 --------------------VVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLS 386 (1351)
T ss_pred --------------------eeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhh
Confidence 11233447776665543322 2233556677777766544 44579999999999998
Q ss_pred hCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHH
Q psy12288 279 TGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASD 358 (393)
Q Consensus 279 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
.|..+-.-.. .+..+.. ......
T Consensus 387 ~~~~i~~~~~--------------------~~~~~l~-------------------------------------~~~~~~ 409 (1351)
T KOG1035|consen 387 QGEDISEKSA--------------------VPVSLLD-------------------------------------VLSTSE 409 (1351)
T ss_pred hcCccccccc--------------------chhhhhc-------------------------------------cccchh
Confidence 8754321000 0111100 011114
Q ss_pred HHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 359 FADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 359 ~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..+...+|+.-++++|+++.+++.|||.+.
T Consensus 410 ~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 410 LLDALPKCLDEDSEERLSALELLTHPFLRF 439 (1351)
T ss_pred hhhhhhhhcchhhhhccchhhhhhchhccc
Confidence 568889999999999999999999999864
|
|
| >KOG1235|consensus | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0021 Score=63.38 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=71.7
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc--------------------------------ccchhhHHHHHHHHHh
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--------------------------------VYADTARDEIVLLKAV 81 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------------------------~~~~~~~~E~~~l~~l 81 (393)
+-||..+.|.|++|+.+. |+.||||+-+..- .....+..|+..++.-
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 578999999999998876 9999999865310 0012222233333222
Q ss_pred cccCCCCcccccCccccc---ceeccccceeecCCCeEEEEEEeeccc---cHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q psy12288 82 GRKSNVHSSAYNTQASEK---VIRLLNDFKIYSRNGTHICMVFEVMGY---NLLRLIARSDYKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~iv~e~~~~---~l~~~~~~~~~~~l~~~~~~~i~~ql~~~ 155 (393)
.....+.... .+-+ -+.+-.++. .-...-+++|||+.| +-.+.+.+.. ++...+..-..+...-
T Consensus 246 ~Nae~~~~~f----~~~~~~~~V~VP~Vy~---~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~~ 315 (538)
T KOG1235|consen 246 KNAERFRENF----KDFSLLTYVLVPKVYW---DLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYLE 315 (538)
T ss_pred HhHHHHHHHH----HhcccccceeCCeehh---hcCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHHH
Confidence 1111000000 1111 111222222 122347899999943 3345555543 6666554444443333
Q ss_pred HHHhhhcCCeeeccCCCCceEEeec
Q psy12288 156 LNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 156 l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
.-+- . |.+|+|=.|-||+++.+
T Consensus 316 qIf~--~-GffHaDPHPGNilv~~~ 337 (538)
T KOG1235|consen 316 QIFK--T-GFFHADPHPGNILVRPN 337 (538)
T ss_pred HHHh--c-CCccCCCCCCcEEEecC
Confidence 3333 3 99999999999999754
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.011 Score=50.89 Aligned_cols=125 Identities=18% Similarity=0.283 Sum_probs=83.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc-----------------ccchhhHHHHHHHHHhc-ccCCCCcccccCc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-----------------VYADTARDEIVLLKAVG-RKSNVHSSAYNTQ 95 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~ 95 (393)
..||+|+.-.||. |+.+ ...+||+..... .......+|+.....+. ... .
T Consensus 7 ~~i~~G~~R~cy~--HP~d-p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~---------~ 74 (199)
T PF10707_consen 7 DLIAQGGERDCYQ--HPDD-PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRG---------V 74 (199)
T ss_pred cccccCCCceEEE--CCCC-CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccC---------C
Confidence 5689999998986 3433 346789887543 22355677888877776 322 2
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec---c----ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM---G----YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~---~----~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.+.++.++++... .+...-+|+|.+ . .+|.+++... .++. .....+. .-..+|-++ +|+.+
T Consensus 75 ~~~~i~r~~G~ve----T~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L~---~f~~~l~~~-~Iv~~ 142 (199)
T PF10707_consen 75 DWSHIPRFYGFVE----TNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQALD---EFKRYLLDH-HIVIR 142 (199)
T ss_pred cccccccEeEEEe----cCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHHH---HHHHHHHHc-CCeec
Confidence 5677888888877 555678888877 2 2566666443 2444 4443333 344566666 89999
Q ss_pred cCCCCceEEeechh
Q psy12288 169 DIKPENILMCVDYD 182 (393)
Q Consensus 169 dlkp~NIl~~~~~~ 182 (393)
|++|.||++..+..
T Consensus 143 dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 143 DLNPHNIVVQRRDS 156 (199)
T ss_pred CCCcccEEEEecCC
Confidence 99999999976653
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0081 Score=63.59 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=49.5
Q ss_pred EEEecccCceEEEEEEeCCCC--ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDK--TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++.++.|.++.+|+......+ ..+++|+..... .....+.+|..+++.+.....+ . +++++..+.
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~v--------p---VP~v~~~~~ 111 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDV--------P---VPKVYCLCT 111 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCC--------C---CCcEEEEec
Confidence 678899999999998765432 356677654322 1234678999999999522111 1 223332222
Q ss_pred eecCCCeEEEEEEeecccc
Q psy12288 109 IYSRNGTHICMVFEVMGYN 127 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~~~~ 127 (393)
.. ...+..++|||++.|.
T Consensus 112 d~-~v~G~~flVME~v~G~ 129 (822)
T PLN02876 112 DA-SVIGTAFYIMEYLEGR 129 (822)
T ss_pred CC-CcCCCceEEEEecCCc
Confidence 11 1124578999999654
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0073 Score=53.77 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=28.7
Q ss_pred EEecccCce-EEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcc
Q psy12288 34 RKLGWGHFS-TVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 34 ~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 83 (393)
+.|+.|+.. .||+. +..+++|+.... .....+.+|..+++.+..
T Consensus 3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~-~~~~~~~~E~~~l~~L~~ 47 (235)
T cd05155 3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA-GYAGQVRKEQRWLPRLAP 47 (235)
T ss_pred eeccCCCcccceEEc-----CCceEEEcCCcc-chHHHHHHHHHHHHHHhc
Confidence 456656655 58876 124667865542 234578899999999864
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.017 Score=51.30 Aligned_cols=52 Identities=8% Similarity=0.113 Sum_probs=35.6
Q ss_pred EEEecccCceEEEEEEeCC-CCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|..|-.+.+|++.... .++.+++|+............+|..+++.+...
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~ 55 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH 55 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC
Confidence 4667788888999986443 356788997764433333446799999998543
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.043 Score=52.60 Aligned_cols=76 Identities=21% Similarity=0.221 Sum_probs=49.0
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEec------c--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKS------D--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.+.||.|.++.||++....+++.++||.-.. . +...++...|...|+.+.... ...+++++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~-----------p~~VPkV~ 99 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYV-----------PDLVPKVY 99 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhC-----------CCCCCeEE
Confidence 4789999999999998865446799997431 1 123456778888888874321 11233333
Q ss_pred ccceeecCCCeEEEEEEeecc
Q psy12288 105 NDFKIYSRNGTHICMVFEVMG 125 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~ 125 (393)
.. +....++|||++.
T Consensus 100 ~~------D~~~~~lVME~L~ 114 (401)
T PRK09550 100 HY------DEELAVTVMEDLS 114 (401)
T ss_pred EE------CCCCCEEEEecCC
Confidence 32 2233678999983
|
|
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.019 Score=51.82 Aligned_cols=46 Identities=13% Similarity=0.032 Sum_probs=30.9
Q ss_pred ecccCceEEEEEEeCCCCceEEEEEEecccccc-hhhHHHHHHHHHhcc
Q psy12288 36 LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA-DTARDEIVLLKAVGR 83 (393)
Q Consensus 36 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~E~~~l~~l~~ 83 (393)
+..|-.+.+|+.. .++..+++|+........ ....+|..+++.+..
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~ 50 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSA 50 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHh
Confidence 4557778889885 456678888755432221 346789999999954
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.16 Score=47.41 Aligned_cols=80 Identities=5% Similarity=-0.003 Sum_probs=44.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++.++.|....+|+.... +| .+++|++.. ........|..+++.+..... ..|.+++-.+.-... .
T Consensus 27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~gl---------pvP~~i~~~~G~~~~-~ 92 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--LTAEDLPFFLGLMQHLAARGV---------PVPAPVARRDGAALG-E 92 (319)
T ss_pred cchhccccccceEEEEeC-CC-cEEEEEecc--CChHHhHHHHHHHHHHHHCCC---------CCCcceeCCCCCEee-e
Confidence 345667777789988643 33 578888752 234555667778877754321 223322221111111 1
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
.++..+++++++.|
T Consensus 93 ~~g~~~~l~~~l~G 106 (319)
T PRK05231 93 LAGKPAAIVTFLEG 106 (319)
T ss_pred eCCEEEEEEEecCC
Confidence 23457899999844
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.018 Score=49.25 Aligned_cols=87 Identities=24% Similarity=0.252 Sum_probs=61.8
Q ss_pred HHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeecc-ccHHHH---HHhcCCCCCCHHHHHH
Q psy12288 72 RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG-YNLLRL---IARSDYKGIHIQNVRT 147 (393)
Q Consensus 72 ~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~-~~l~~~---~~~~~~~~l~~~~~~~ 147 (393)
..|..+++.+. ..++++++++.+- ..+++|+.+ +++... +.. ....++..+.+
T Consensus 7 ~~E~lll~~l~-------------~~~~~pk~lG~CG--------~~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~ 63 (188)
T PF12260_consen 7 NNEPLLLQLLQ-------------GSEPFPKLLGSCG--------RFYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAK 63 (188)
T ss_pred ccHHHHHHHcC-------------CCCCCCCeeeECC--------CEEEEEeecCcccccccccccc--ccccCHHHHHH
Confidence 45777888884 3347788887764 357889985 444311 111 12257889999
Q ss_pred HHHHHHHHHHHhhhcC--CeeeccCCCCceEEeech
Q psy12288 148 IIKQVLEGLNYLHTQC--RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 148 i~~ql~~~l~~lH~~~--~i~H~dlkp~NIl~~~~~ 181 (393)
|+.+++..+.+++... .+.-.|++++|+.++.++
T Consensus 64 iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~ 99 (188)
T PF12260_consen 64 IALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDG 99 (188)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCC
Confidence 9999999999998721 467789999999998776
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.084 Score=49.71 Aligned_cols=49 Identities=22% Similarity=0.257 Sum_probs=34.8
Q ss_pred EecccCceEEEEEEeCCCCceEEEEEEe----c---c-cccchhhHHHHHHHHHhcc
Q psy12288 35 KLGWGHFSTVWLSWDLQDKTFVALKIVK----S---D-QVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 35 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~----~---~-~~~~~~~~~E~~~l~~l~~ 83 (393)
.||.|....||++....+++.|+||.-. . + +...++..-|..+|+....
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~ 58 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGE 58 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhc
Confidence 5799999999999876444679999532 1 1 3445666778888887743
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.13 Score=47.63 Aligned_cols=53 Identities=13% Similarity=0.153 Sum_probs=37.5
Q ss_pred EEEecccCceEEEEEEeCC------CCceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ------DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
++.+..|-...+|++.... .++.+++|+............+|..+++.+....
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g 61 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERN 61 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCC
Confidence 3556667777899886543 2578889997765444466788999999986543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
| >KOG1093|consensus | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.019 Score=55.77 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=59.1
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
+++||||+|.++.++..|...+.... ..+.+..+.+.. -.+.+...-
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~------~s~~l~~i~k~~-~~d~~~~~~-------------------------- 156 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELT------ESEYLEILLKYY-TDDQELLST-------------------------- 156 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHH------HHHHHHHHHHhc-cCchhHHHH--------------------------
Confidence 49999999999999999987775433 223333333221 111111100
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.. +. .+--..+..+.++..+|+...|..||...++.+++-|..+
T Consensus 157 -a~-e~-~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 157 -AM-EH-LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred -HH-HH-HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 00 00 1223556778899999999999999999999999877543
|
|
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.19 Score=46.59 Aligned_cols=81 Identities=9% Similarity=-0.004 Sum_probs=45.0
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
+..++.|....+|++... ++ .+++|+..... .......|..++..+..... ..+.+++-.+..... .
T Consensus 27 i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~---------pvp~~i~t~~g~~~~-~ 93 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTD-VG-RYILTLYEKRV-KAEELPFFLALTTHLAARGL---------PVPKPVKSRDGRQLS-T 93 (307)
T ss_pred ccccCCccccceEEEEeC-CC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCC---------CCCccccCCCCCeeh-h
Confidence 566777777889988542 33 56788765421 23456677888888754321 122222221111111 1
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
.++..+++++++.|
T Consensus 94 ~~g~~~~l~e~i~G 107 (307)
T TIGR00938 94 LAGKPACLVEFLQG 107 (307)
T ss_pred cCCeEEEEEEeCCC
Confidence 23567899999844
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.096 Score=48.25 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=33.9
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.+..|....+|+... ++..+++|+... ........|+.+++.+...
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~ 66 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAER 66 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHC
Confidence 56777787788998854 334688898764 2346677889998888543
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >PLN02421 phosphotransferase, alcohol group as acceptor/kinase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.15 Score=47.97 Aligned_cols=53 Identities=9% Similarity=0.143 Sum_probs=35.4
Q ss_pred EEEecccCceEEEEEEeCCC---CceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
++.|..|=...+|++..... +..|++|+........-...+|..+++.+....
T Consensus 19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~g 74 (330)
T PLN02421 19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAG 74 (330)
T ss_pred EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcC
Confidence 34555577788999865432 237889987654433444578999999986544
|
|
| >PLN02236 choline kinase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.16 Score=48.03 Aligned_cols=54 Identities=15% Similarity=-0.013 Sum_probs=36.4
Q ss_pred EEEEecccCceEEEEEEeCC----CCceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQ----DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
-+..+-.|-...+|++.... +++.+++|+........-...+|..+++.+....
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~g 97 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHG 97 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcC
Confidence 34556558888999986432 2467899987654433334478999999986543
|
|
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.084 Score=50.33 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=37.5
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEE----ecc---cccchhhHHHHHHHHHhcc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIV----KSD---QVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~----~~~---~~~~~~~~~E~~~l~~l~~ 83 (393)
++.||.|.-..||++.+...++.|+||.- +.. +...++..-|..+|+....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~ 91 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEE 91 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHh
Confidence 68899999999999987544567899853 211 3345667788899988754
|
|
| >KOG2268|consensus | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.0054 Score=56.12 Aligned_cols=123 Identities=21% Similarity=0.313 Sum_probs=76.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----------c-------------ccchhhHHHHHHHHHhcccC
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----------Q-------------VYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~-------------~~~~~~~~E~~~l~~l~~~~ 85 (393)
-|.+...||-|.-+-||.+-+. .|.+.++|+-... . ..+-...+|+..|+.+..+.
T Consensus 93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 3678899999999999999665 4566777742210 0 11123356888888875422
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
. . +++.+ +.+..++|||++ +..+...-. ......+...+..-+.-|-.+ |
T Consensus 172 f---------p---VPkpi--------D~~RH~Vvmelv~g~Pl~~v~~--------v~d~~~ly~~lm~~Iv~la~~-G 222 (465)
T KOG2268|consen 172 F---------P---VPKPI--------DHNRHCVVMELVDGYPLRQVRH--------VEDPPTLYDDLMGLIVRLANH-G 222 (465)
T ss_pred C---------C---CCCcc--------cccceeeHHHhhcccceeeeee--------cCChHHHHHHHHHHHHHHHHc-C
Confidence 1 0 11222 344578899988 444433321 122333444455555566667 9
Q ss_pred eeeccCCCCceEEeech
Q psy12288 165 IIHTDIKPENILMCVDY 181 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~ 181 (393)
++|+|-.-=||++.++.
T Consensus 223 lIHgDFNEFNimv~dd~ 239 (465)
T KOG2268|consen 223 LIHGDFNEFNIMVKDDD 239 (465)
T ss_pred ceecccchheeEEecCC
Confidence 99999999999998776
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.32 Score=44.94 Aligned_cols=109 Identities=12% Similarity=0.125 Sum_probs=69.0
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
-.+.||.|..+.||+.... ++ .+.+|+.+. ......+..|...|+.+..... ..++++++.+.. +
T Consensus 18 ~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~-----------vpVP~V~~~~~~-~ 82 (297)
T PRK10593 18 RVECISEQPYAALWALYDS-QG-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGT-----------VRMPTVYGVMTH-E 82 (297)
T ss_pred eeeecCCccceeEEEEEcC-CC-CEEEEEecc-cccchHHHHHHHHHHHHccCCC-----------CCcCcEEEEecc-C
Confidence 3578999999999998443 23 466787543 2234678999999999954321 123344433321 1
Q ss_pred CCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 112 RNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 112 ~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
...+..++|||++.+ ++.+ . .........+..+++.+++-||..
T Consensus 83 ~~~g~~~LVmE~i~G~~~~~-~------~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 83 QSPGPDVLLLERLRGVSVEA-P------ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred CcCCCeEEEEeccCCEecCC-C------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 134558999999954 3332 1 123344566778888999999963
|
|
| >PTZ00384 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.45 Score=45.57 Aligned_cols=52 Identities=15% Similarity=0.136 Sum_probs=30.9
Q ss_pred EEEecccCceEEEEEEeCCCC-c-----eEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDK-T-----FVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~-~-----~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|..|-.+.+|++...... . .|.++.........-.-.+|+.+++.+...
T Consensus 55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~ 112 (383)
T PTZ00384 55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDN 112 (383)
T ss_pred EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhC
Confidence 455655888899999654332 2 245444333222233446789999998544
|
|
| >cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2') | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.19 Score=45.96 Aligned_cols=46 Identities=20% Similarity=0.094 Sum_probs=28.4
Q ss_pred cccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 37 GWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 37 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++|-...|+.+ ...+|..+++|+-.. ........+|..+|+.+...
T Consensus 20 ~~g~~~~v~~i-~~~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~~ 65 (276)
T cd05152 20 ESGLDFQVVFA-KDTDGVPWVLRIPRR-PDVSERAAAEKRVLALVRKH 65 (276)
T ss_pred CCcceeEEEEE-EcCCCCeEEEEecCC-HHHHHHHHHHHHHHHHHHhc
Confidence 44444455554 223466788886543 22345678999999999653
|
MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported |
| >COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.11 Score=48.60 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=52.0
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..+.+....+.+.+++|++-|+.+... .. -..+++..++.+.+..+.-+-.....-|||+...||+++ ++
T Consensus 289 ~~~vv~~de~~y~yl~~kdhgt~is~i-k~-----~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~G 358 (488)
T COG5072 289 TLKVVSLDETLYLYLHFKDHGTPISII-KA-----DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EG 358 (488)
T ss_pred cceEEecCCceEEEEEEecCCceeeee-ec-----ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cC
Confidence 334433346778889999887765432 11 346788889999888888888777899999999999998 55
|
|
| >PRK11768 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.10 E-value=1.3 Score=41.50 Aligned_cols=44 Identities=14% Similarity=0.079 Sum_probs=29.7
Q ss_pred CceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 40 HFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 40 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
.-..||+... .++..+++|+..........+..|+.++..+...
T Consensus 37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~ 80 (325)
T PRK11768 37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEA 80 (325)
T ss_pred ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC
Confidence 3446888743 3456789998765444456677899888888553
|
|
| >KOG1826|consensus | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.035 Score=60.64 Aligned_cols=129 Identities=14% Similarity=0.106 Sum_probs=91.5
Q ss_pred CCeEEEEEEeec-cccHHHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHhhhcCC----eeeccCCCCceEEeechhHHh
Q psy12288 113 NGTHICMVFEVM-GYNLLRLIARSDYKG--IHIQNVRTIIKQVLEGLNYLHTQCR----IIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 113 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~--l~~~~~~~i~~ql~~~l~~lH~~~~----i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.....+..++++ +|++++.+.++.... +...-+.....+.+.+..-+|...+ .+|+++|+-|.++..+.
T Consensus 1302 ~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny---- 1377 (2724)
T KOG1826|consen 1302 ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNY---- 1377 (2724)
T ss_pred CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCC----
Confidence 455678889998 899999987764332 2222333333443555555554432 68899999999987666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+++.++|+.+... ......++++.|+.|+....-.++
T Consensus 1378 ---------------------------------------~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t 1418 (2724)
T KOG1826|consen 1378 ---------------------------------------NVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFT 1418 (2724)
T ss_pred ---------------------------------------cccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhh
Confidence 38899999877221 123344678889999998888888
Q ss_pred chhhHHhHHHHHHHHHhCCCCC
Q psy12288 263 PAADIWSTACMAFELATGDYLF 284 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf 284 (393)
.++|+|..|+.+|...-|..+|
T Consensus 1419 ~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1419 KRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred hHHHHHHHHHHHHHHhcccHHH
Confidence 8899999999999988876666
|
|
| >PTZ00296 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.82 E-value=1.1 Score=43.76 Aligned_cols=53 Identities=11% Similarity=0.062 Sum_probs=36.7
Q ss_pred EEEEecccCceEEEEEEeCCC--------CceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQD--------KTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
-++.|..|=...+|++..... ++.|.+++.-......-....|..+++.+...
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~ 169 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKY 169 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHC
Confidence 456677777888999865421 46788998765544444567799998888654
|
|
| >KOG1236|consensus | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.54 Score=44.81 Aligned_cols=62 Identities=19% Similarity=0.305 Sum_probs=39.8
Q ss_pred EEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 117 ICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 117 ~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
..++-+|. |-++..++.... .+++...+++.-...|+--+-.--+.+|.|+.|.||++..+.
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK 382 (565)
T ss_pred ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence 34555566 667777776543 445555555555555554333222799999999999997654
|
|
| >PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length | Back alignment and domain information |
|---|
Probab=89.66 E-value=2.2 Score=37.46 Aligned_cols=29 Identities=24% Similarity=0.253 Sum_probs=23.7
Q ss_pred HHHHHhh-hcCCeeeccCCCCceEEeechh
Q psy12288 154 EGLNYLH-TQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 154 ~~l~~lH-~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++|.-.| ++.+.+|+|..|+||+-|.++.
T Consensus 152 ~~L~~fH~~~~~~lHGD~np~NiM~D~~G~ 181 (308)
T PF07387_consen 152 KDLMDFHSENQHCLHGDCNPDNIMCDKFGY 181 (308)
T ss_pred HHHHHhhccCCCeecCCCChhheeecCCCC
Confidence 5567778 4447999999999999988884
|
The function of this family is unknown. |
| >PHA03111 Ser/Thr kinase; Provisional | Back alignment and domain information |
|---|
Probab=89.63 E-value=1.2 Score=41.39 Aligned_cols=64 Identities=17% Similarity=0.165 Sum_probs=38.4
Q ss_pred EEEEEeeccccHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc---CCeeeccCCCCceEEeec
Q psy12288 117 ICMVFEVMGYNLLRL---IARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ---CRIIHTDIKPENILMCVD 180 (393)
Q Consensus 117 ~~iv~e~~~~~l~~~---~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~---~~i~H~dlkp~NIl~~~~ 180 (393)
-.||++...++.-.. .....+..-..+-++.++.|++.-.-.+.+. ...+|.||||+|||+-+.
T Consensus 250 nIIIfPLArcSadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds 319 (444)
T PHA03111 250 NIIIFPLARCSADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS 319 (444)
T ss_pred cEEEEehhhcccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence 568888874432221 1111111123456778888887765444322 158999999999999544
|
|
| >KOG2269|consensus | Back alignment and domain information |
|---|
Probab=89.06 E-value=0.4 Score=44.23 Aligned_cols=61 Identities=20% Similarity=0.269 Sum_probs=46.5
Q ss_pred EEEEEeeccccHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 117 ICMVFEVMGYNLL--RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 117 ~~iv~e~~~~~l~--~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
.++||.++|.+-. -.+.. -.++.++.+..-.|+..++.-|...|-+||-|++-=|+|...+
T Consensus 358 hvLVMsFiGd~~~aAPkLK~---v~l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~g 420 (531)
T KOG2269|consen 358 HVLVMSFIGDQGLAAPKLKN---VELTDDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWTPG 420 (531)
T ss_pred ceEEEEeecCCCCCCccccc---cccChHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheecCC
Confidence 5689999953322 22221 2378888888889999999999888899999999999998544
|
|
| >TIGR02906 spore_CotS spore coat protein, CotS family | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.85 Score=42.20 Aligned_cols=16 Identities=31% Similarity=0.308 Sum_probs=14.9
Q ss_pred CeeeccCCCCceEEee
Q psy12288 164 RIIHTDIKPENILMCV 179 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~ 179 (393)
+++|+|+.+.||+++.
T Consensus 188 ~liHgD~~~~Nil~~~ 203 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD 203 (313)
T ss_pred ceEcCCCCcccEEEeC
Confidence 7999999999999975
|
Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. |
| >PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] | Back alignment and domain information |
|---|
Probab=87.60 E-value=5.4 Score=36.63 Aligned_cols=74 Identities=15% Similarity=0.105 Sum_probs=45.6
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeec
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS 111 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 111 (393)
-.+.++-|....+|+.. .+++.+.+|+-. ......+..|..-|+.+..... ..+++.+....
T Consensus 21 ~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~-----------~~vP~vi~~G~--- 82 (288)
T PF03881_consen 21 SIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANP-----------IRVPKVIAWGE--- 82 (288)
T ss_dssp EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTT-----------SBS--EEEEEE---
T ss_pred eeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCC-----------CCCCeEEEEEe---
Confidence 35678889999999985 567788899766 2345678999999999954322 23445554443
Q ss_pred CCCeEEEEEEeec
Q psy12288 112 RNGTHICMVFEVM 124 (393)
Q Consensus 112 ~~~~~~~iv~e~~ 124 (393)
..+..+++||++
T Consensus 83 -~~~~~fLlle~l 94 (288)
T PF03881_consen 83 -YDDDAFLLLEFL 94 (288)
T ss_dssp --SSCCEEEEE--
T ss_pred -ecCCceEEEEee
Confidence 223348999997
|
Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A. |
| >PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly | Back alignment and domain information |
|---|
Probab=87.50 E-value=1.2 Score=41.51 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=37.4
Q ss_pred EEEEEeeccccHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc---CCeeeccCCCCceEEeech
Q psy12288 117 ICMVFEVMGYNLLRL---IARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ---CRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 117 ~~iv~e~~~~~l~~~---~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~---~~i~H~dlkp~NIl~~~~~ 181 (393)
-.||++...++.-.. .....+-....+-++.++.|++.-.--+.+. ...+|.||||+|||+-+..
T Consensus 246 nIIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~ 316 (434)
T PF05445_consen 246 NIIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSK 316 (434)
T ss_pred cEEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCC
Confidence 468999875443221 1111111223445677788876544223221 1589999999999995443
|
; GO: 0004672 protein kinase activity, 0005524 ATP binding |
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=86.84 E-value=0.31 Score=38.27 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=36.4
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHh
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV 81 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l 81 (393)
.-||.|+.|.||+|.... |+.||||+.... ..+.+..++.+++.+
T Consensus 17 ~PlasASiaQVh~a~l~~-g~~VaVKV~rP~--i~~~i~~Dl~~l~~~ 61 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKD-GEEVAVKVQRPG--IEEQIEADLRILRRL 61 (119)
T ss_pred chhhheehhhheeeeecc-cchhhhhhcchH--HHHHHHHHHHHHHHH
Confidence 578999999999997664 899999987753 456777788887776
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >PRK10271 thiK thiamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=86.78 E-value=0.59 Score=39.80 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=15.4
Q ss_pred CeeeccCCCCceEEeech
Q psy12288 164 RIIHTDIKPENILMCVDY 181 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~ 181 (393)
..+|+|+.|.|+++..++
T Consensus 78 ~p~H~D~~~~N~~~~~~~ 95 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG 95 (188)
T ss_pred eeecCCCCCccEEEECCC
Confidence 479999999999997665
|
|
| >COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.48 E-value=1.7 Score=39.56 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhhhc-CCeeeccCCCCceEEeech
Q psy12288 144 NVRTIIKQVLEGLNYLHTQ-CRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 144 ~~~~i~~ql~~~l~~lH~~-~~i~H~dlkp~NIl~~~~~ 181 (393)
.+...+..+-.++.-.+.. .-+||+|+.|.|++.+..+
T Consensus 133 ~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~ 171 (269)
T COG0510 133 LLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKG 171 (269)
T ss_pred HHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCC
Confidence 3444566666666666643 3589999999999998744
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 393 | ||||
| 1wbp_A | 397 | Srpk1 Bound To 9mer Docking Motif Peptide Length = | 1e-131 | ||
| 2x7g_A | 389 | Structure Of Human Serine-Arginine-Rich Protein-Spe | 1e-129 | ||
| 3beg_A | 381 | Crystal Structure Of Sr Protein Kinase 1 Complexed | 1e-129 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 3e-93 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 7e-93 | ||
| 3llt_A | 360 | Crystal Structure Of Pf14_0431, Kinase Domain Lengt | 3e-35 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 5e-32 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 6e-32 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 8e-32 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 2e-31 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 3e-31 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 3e-31 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 9e-31 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 4e-30 | ||
| 2wu6_A | 381 | Crystal Structure Of The Human Clk3 In Complex With | 1e-29 | ||
| 2exe_A | 357 | Crystal Structure Of The Phosphorylated Clk3 Length | 2e-29 | ||
| 2eu9_A | 355 | Crystal Structure Of Clk3 Length = 355 | 2e-29 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 7e-29 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 1e-19 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 1e-17 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 1e-17 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 1e-17 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 1e-17 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 2e-17 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 2e-17 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 2e-17 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 2e-17 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 2e-17 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 2e-17 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 2e-17 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 2e-17 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 2e-17 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 2e-17 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 3e-17 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 3e-17 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 3e-17 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 3e-17 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 4e-17 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 5e-17 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 5e-17 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 5e-17 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 6e-17 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 8e-17 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 8e-17 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-16 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 1e-16 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 1e-16 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 2e-16 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 2e-16 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-16 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 3e-16 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 4e-16 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-16 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-15 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-15 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 3e-15 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-14 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-14 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-14 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-14 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 1e-13 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-13 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 1e-13 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-13 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-13 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 3e-13 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 3e-13 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 5e-13 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-13 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 5e-13 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 5e-13 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 5e-13 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 5e-13 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 5e-13 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-13 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 6e-13 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 8e-13 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 8e-13 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 8e-13 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 9e-13 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 1e-12 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 1e-12 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 1e-12 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 1e-12 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 1e-12 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 1e-12 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 1e-12 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 1e-12 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-12 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 1e-12 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 1e-12 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-12 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 1e-12 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 1e-12 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-12 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 2e-12 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-12 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 3e-12 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-12 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 4e-12 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 4e-12 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-12 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 4e-12 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 7e-12 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 7e-12 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 8e-12 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 9e-12 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 1e-11 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 2e-11 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 2e-11 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-11 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-11 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 2e-11 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 2e-11 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 2e-11 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-11 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 3e-11 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 3e-11 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-11 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 3e-11 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 3e-11 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-11 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-11 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-11 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 3e-11 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-11 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-11 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-11 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-11 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 3e-11 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-11 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 3e-11 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-11 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 3e-11 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-11 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 3e-11 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-11 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 3e-11 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-11 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-11 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 3e-11 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-11 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-11 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-11 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 3e-11 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 3e-11 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 3e-11 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 4e-11 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 4e-11 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 4e-11 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 4e-11 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 4e-11 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 4e-11 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 4e-11 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 4e-11 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 5e-11 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 5e-11 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 6e-11 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 6e-11 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 7e-11 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 7e-11 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 8e-11 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-10 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-10 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-10 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-10 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 3e-10 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 3e-10 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 3e-10 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 4e-10 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 4e-10 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 5e-10 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-10 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 9e-10 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 9e-10 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-09 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-09 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 2e-09 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 2e-09 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-09 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-09 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 2e-09 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 2e-09 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 2e-09 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 2e-09 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 2e-09 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-09 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-09 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-09 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-09 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 2e-09 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-09 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-09 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 2e-09 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-09 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 2e-09 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 3e-09 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 3e-09 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 5e-09 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 6e-09 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 6e-09 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 6e-09 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 6e-09 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 7e-09 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 8e-09 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 9e-09 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 9e-09 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 1e-08 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 2e-08 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 2e-08 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-08 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-08 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 4e-08 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 5e-08 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 7e-08 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 7e-08 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 9e-08 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 9e-08 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 1e-07 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-07 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-07 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-07 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-07 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-07 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-07 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-07 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-07 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 2e-07 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 2e-07 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 3e-07 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 3e-07 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 4e-07 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 4e-07 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 4e-07 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 5e-07 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 6e-07 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 6e-07 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 6e-07 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 8e-07 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 8e-07 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 9e-07 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 9e-07 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 1e-06 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 1e-06 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 1e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 1e-06 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-06 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 1e-06 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 1e-06 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-06 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-06 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-06 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-06 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-06 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-06 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-06 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-06 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-06 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-06 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-06 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-06 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 2e-06 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-06 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-06 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-06 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-06 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-06 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-06 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-06 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-06 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-06 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-06 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 3e-06 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-06 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-06 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-06 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 3e-06 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 3e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 3e-06 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-06 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 3e-06 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 3e-06 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 3e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 3e-06 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 3e-06 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-06 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 3e-06 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 3e-06 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 3e-06 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 3e-06 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 3e-06 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 3e-06 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 3e-06 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-06 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 3e-06 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-06 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 4e-06 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 4e-06 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 4e-06 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 4e-06 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-06 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 4e-06 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 4e-06 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 4e-06 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 4e-06 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 4e-06 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 4e-06 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 5e-06 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-06 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 5e-06 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 5e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-06 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 5e-06 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 5e-06 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 5e-06 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-06 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 6e-06 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 6e-06 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 6e-06 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 7e-06 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 7e-06 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 7e-06 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 7e-06 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 7e-06 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 8e-06 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 8e-06 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 8e-06 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 9e-06 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 9e-06 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 9e-06 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 9e-06 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-05 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-05 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 1e-05 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 1e-05 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 1e-05 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 1e-05 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 1e-05 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-05 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 1e-05 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-05 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 1e-05 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-05 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 1e-05 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 1e-05 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 1e-05 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 2e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 2e-05 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 2e-05 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 2e-05 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-05 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-05 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-05 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-05 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 2e-05 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-05 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-05 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 3e-05 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 3e-05 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 3e-05 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 3e-05 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-05 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-05 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 3e-05 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 3e-05 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 3e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-05 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 4e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-05 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 4e-05 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 4e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 4e-05 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 4e-05 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 4e-05 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 4e-05 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 5e-05 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 5e-05 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 5e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 5e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 5e-05 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 5e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 5e-05 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 5e-05 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 5e-05 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 5e-05 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 5e-05 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 6e-05 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 6e-05 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 6e-05 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 6e-05 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 7e-05 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 7e-05 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 7e-05 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 8e-05 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 9e-05 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 9e-05 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 9e-05 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 9e-05 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 9e-05 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 9e-05 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 9e-05 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 1e-04 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 1e-04 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 1e-04 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 1e-04 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 1e-04 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 1e-04 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 1e-04 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 1e-04 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-04 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-04 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 1e-04 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 1e-04 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 2e-04 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 2e-04 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 2e-04 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 2e-04 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 2e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-04 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 2e-04 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 2e-04 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-04 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-04 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 2e-04 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 2e-04 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 3e-04 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 3e-04 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 3e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 3e-04 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 3e-04 | ||
| 2chl_A | 351 | Structure Of Casein Kinase 1 Gamma 3 Length = 351 | 3e-04 | ||
| 4hgl_A | 330 | Crystal Structure Of Ck1g3 With Compound 1 Length = | 3e-04 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 3e-04 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 3e-04 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 3e-04 | ||
| 2izr_A | 330 | Structure Of Casein Kinase Gamma 3 In Complex With | 3e-04 | ||
| 2c47_A | 313 | Structure Of Casein Kinase 1 Gamma 2 Length = 313 | 3e-04 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 4e-04 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 4e-04 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 4e-04 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 4e-04 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 4e-04 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 4e-04 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 5e-04 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 6e-04 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 6e-04 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 6e-04 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 6e-04 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 7e-04 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 7e-04 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 7e-04 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 7e-04 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 7e-04 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 7e-04 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 7e-04 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 7e-04 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 7e-04 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 7e-04 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 8e-04 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 8e-04 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 8e-04 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 8e-04 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 8e-04 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 8e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 8e-04 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 8e-04 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 8e-04 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 8e-04 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 8e-04 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 8e-04 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 9e-04 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 9e-04 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 9e-04 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 9e-04 |
| >pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397 | Back alignment and structure |
|
| >pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389 | Back alignment and structure |
|
| >pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381 | Back alignment and structure |
|
| >pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357 | Back alignment and structure |
|
| >pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351 | Back alignment and structure |
|
| >pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330 | Back alignment and structure |
|
| >pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 445 bits (1146), Expect = e-156
Identities = 217/390 (55%), Positives = 284/390 (72%), Gaps = 12/390 (3%)
Query: 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS 63
D+QE +Y GGY V+IGDLFN RYHVIRKLGWGHFSTVWLSWD+Q K FVA+K+VKS
Sbjct: 13 DEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS 72
Query: 64 DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEV 123
+ Y +TA DEI LLK+V E V++LL+DFKI NGTHICMVFEV
Sbjct: 73 AEHYTETALDEIRLLKSVRNSDPND------PNREMVVQLLDDFKISGVNGTHICMVFEV 126
Query: 124 MGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
+G++LL+ I +S+Y+G+ + V+ II+QVL+GL+YLHT+CRIIHTDIKPENIL+ V+
Sbjct: 127 LGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQY 186
Query: 184 VRRMARDATKHHKIGMKLPMSLD------STMSDFSLLDPANEVYDISVKIADLGNACWI 237
+RR+A +AT+ + G P + + + VKIADLGNACW+
Sbjct: 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWV 246
Query: 238 DDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDD 297
HF ++IQTRQYRS+EVLIG+GY ADIWSTACMAFELATGDYLF+P +G+EY+RD+D
Sbjct: 247 HKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDED 306
Query: 298 HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEAS 357
H+A I+EL+G +P++++ GK + +FT +G+ + I LKPWGL++VL EKY WS+ EA+
Sbjct: 307 HIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAA 366
Query: 358 DFADFLLPMLHVNQKLRASAADCLRHPWLN 387
F DFLLPML + + RA+AA+CLRHPWLN
Sbjct: 367 GFTDFLLPMLELIPEKRATAAECLRHPWLN 396
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 416 bits (1070), Expect = e-145
Identities = 172/378 (45%), Positives = 231/378 (61%), Gaps = 41/378 (10%)
Query: 11 EYRPGGYCPVQIGDLF-NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
+YRPGGY P G+ + + RY ++RKLGWGHFSTVWL+ D+ + T VA+KIV+ D+VY +
Sbjct: 1 DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 70 TARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL 129
A DEI LL+ V N + +++LL+ F NG H+ MVFEV+G NLL
Sbjct: 61 AAEDEIKLLQRVNDADNTKEDSMGAN---HILKLLDHFNHKGPNGVHVVMVFEVLGENLL 117
Query: 130 RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189
LI + +++GI + V+ I KQ+L GL+Y+H +C IIHTDIKPEN+LM
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME----------- 166
Query: 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ 249
+ I +KIADLGNACW D+H+ + IQTR+
Sbjct: 167 --------------------------IVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI 309
YRS EVL+GA +G ADIWSTAC+ FEL TGD+LF+P G Y++DDDH+A I+EL+G +
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 260
Query: 310 PKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV 369
P +L GK T +F +G R I LK W L VLTEKY +SK EA + +DFL PML +
Sbjct: 261 PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL 320
Query: 370 NQKLRASAADCLRHPWLN 387
+ + RA A + HPWL
Sbjct: 321 DPRKRADAGGLVNHPWLK 338
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 279 bits (717), Expect = 5e-92
Identities = 98/375 (26%), Positives = 175/375 (46%), Gaps = 42/375 (11%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI 75
+ + G L N + VIRK+G G F V L + +K + A+K+V++ + Y +A+ E
Sbjct: 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEA 82
Query: 76 VLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARS 135
+LK + + +++++ +++ F + H+C++FE +G +L +I R+
Sbjct: 83 DILKKI-QNDDINNN--------NIVKYHGKF--MYYD--HMCLIFEPLGPSLYEIITRN 129
Query: 136 DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195
+Y G HI++++ ++L+ LNYL + + HTD+KPENIL+ Y + +
Sbjct: 130 NYNGFHIEDIKLYCIEILKALNYLR-KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188
Query: 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEV 255
K +K+ D G A + D+ I TRQYR+ EV
Sbjct: 189 KKIQIYRTK------------------STGIKLIDFGCATFKSDYHGSIINTRQYRAPEV 230
Query: 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
++ G+ ++D+WS C+ EL TG LF E +HLA + ++ PIPK +L
Sbjct: 231 ILNLGWDVSSDMWSFGCVLAELYTGSLLFR---THE---HMEHLAMMESIIQPIPKNMLY 284
Query: 316 QGKKTLR-YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASD---FADFLLPMLHVNQ 371
+ KT + + + + + K + F DFL +L ++
Sbjct: 285 EATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP 344
Query: 372 KLRASAADCLRHPWL 386
LR S A+ L+H +L
Sbjct: 345 TLRPSPAELLKHKFL 359
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 1e-81
Identities = 88/384 (22%), Positives = 167/384 (43%), Gaps = 58/384 (15%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQVYADTARDE 74
+ Q GD+ + RY ++ LG G F V D + VA+KIVK+ Y + AR E
Sbjct: 2 MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR 134
I +L+ + + ++ + +++L F HIC+VFE++G + I
Sbjct: 62 IQVLEHLNTT--------DPNSTFRCVQMLEWF--EHHG--HICIVFELLGLSTYDFIKE 109
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
+ + + ++R + Q+ + +N+LH ++ HTD+KPENIL V D +
Sbjct: 110 NGFLPFRLDHIRKMAYQICKSVNFLH-SNKLTHTDLKPENILF-VQSDYTEAYNPKIKRD 167
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
+ + + +K+ D G+A + D+H + + TR YR+ E
Sbjct: 168 ERT-----------------------LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPE 204
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
V++ G+ D+WS C+ E G +F + +HLA + ++GP+PK ++
Sbjct: 205 VILALGWSQPCDVWSIGCILIEYYLGFTVF---PTHD---SKEHLAMMERILGPLPKHMI 258
Query: 315 SQGKKTLRYFTPQGNF--------RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPM 366
+ +K + + ++ KP L + + + E D + M
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP--LKEFMLSQ----DVEHERLFDLIQKM 312
Query: 367 LHVNQKLRASAADCLRHPWLNPRR 390
L + R + + L+HP+ + +
Sbjct: 313 LEYDPAKRITLREALKHPFFDLLK 336
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 7e-80
Identities = 103/394 (26%), Positives = 165/394 (41%), Gaps = 77/394 (19%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI 75
G D +RY V++ +G G F V ++D + VALK+V++++ + A +EI
Sbjct: 85 GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 76 VLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARS 135
+L+ + + + VI +L +F RN HICM FE++ NL LI ++
Sbjct: 145 RILEHL--------RKQDKDNTMNVIHMLENF--TFRN--HICMTFELLSMNLYELIKKN 192
Query: 136 DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195
++G + VR +L+ L+ LH + RIIH D+KPENIL+
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILLK----------------- 234
Query: 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEV 255
+ +K+ D G++C+ IQ+R YR+ EV
Sbjct: 235 --------QQGRS----------------GIKVIDFGSSCYEHQRVYTYIQSRFYRAPEV 270
Query: 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
++GA YG D+WS C+ EL TG L G++ D LA ++EL+G +++L
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEG---DQLACMIELLGMPSQKLLD 324
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKY-----------------HWSKAEASD 358
K+ + + +G R VL +
Sbjct: 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL 384
Query: 359 FADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
F DFL L + +R + LRHPWL R
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK 418
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 7e-80
Identities = 89/380 (23%), Positives = 158/380 (41%), Gaps = 46/380 (12%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQVYADTARDE 74
G+ +IGD RY ++ LG G F V D K+ VALKI+++ Y + AR E
Sbjct: 7 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 66
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR 134
I +LK + K + + + + F H+C+ FE++G N +
Sbjct: 67 INVLKKIKEKDKENKF--------LCVLMSDWF--NFHG--HMCIAFELLGKNTFEFLKE 114
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
++++ + +VR + Q+ L +LH + ++ HTD+KPENIL + + +
Sbjct: 115 NNFQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
+ + S+++AD G+A + +H + TR YR E
Sbjct: 174 KSVK------------------------NTSIRVADFGSATFDHEHHTTIVATRHYRPPE 209
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
V++ G+ D+WS C+ FE G LF E + +HL + +++GPIP ++
Sbjct: 210 VILELGWAQPCDVWSIGCILFEYYRGFTLF---QTHE---NREHLVMMEKILGPIPSHMI 263
Query: 315 SQGKKTLRYFTPQGNFRRI--DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQK 372
+ +K ++ + D + L E D + ML +
Sbjct: 264 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323
Query: 373 LRASAADCLRHPWLNPRRSH 392
R + A+ L HP+
Sbjct: 324 QRITLAEALLHPFFAGLTPE 343
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 1e-77
Identities = 97/394 (24%), Positives = 172/394 (43%), Gaps = 82/394 (20%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI 75
V+ G+ + RY + +G G F V ++D ++ +VA+KI+K+ + + + A+ E+
Sbjct: 42 YDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV 101
Query: 76 VLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARS 135
LL+ + + ++T+ ++ L F RN H+C+VFE++ YNL L+ +
Sbjct: 102 RLLELM--------NKHDTEMKYYIVHLKRHF--MFRN--HLCLVFEMLSYNLYDLLRNT 149
Query: 136 DYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
+++G+ + R +Q+ L +L T + IIH D+KPENIL+C + +
Sbjct: 150 NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLC-NPKR----------- 197
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
++KI D G++C + IQ+R YRS E
Sbjct: 198 -----------------------------SAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 228
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
VL+G Y A D+WS C+ E+ TG+ LF +G + D + IVE++G P +L
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLF---SGAN---EVDQMNKIVEVLGIPPAHIL 282
Query: 315 SQGKKTLRYFTPQGNFR---------RIDNLKPW--------GLYQVLTEKYHWSKAEAS 357
Q K ++F + + + P G+ ++ +
Sbjct: 283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHT 342
Query: 358 -----DFADFLLPMLHVNQKLRASAADCLRHPWL 386
F D +L ML + K R L+H +
Sbjct: 343 VADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 6e-36
Identities = 87/366 (23%), Positives = 138/366 (37%), Gaps = 87/366 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKS 85
+Y I K+G G + V+ + VA+K + V A EI +LK + +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHP 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
N+ + LL F R + +VFE + +L + R +G+ V
Sbjct: 63 NL-------------VNLLEVF----RRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLV 104
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++I Q L+ +N+ H IH D+KPENIL+
Sbjct: 105 KSITWQTLQAVNFCHKH-NCIHRDVKPENILI---------------------------- 135
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGA-GY 261
+ +K+ D G A + D++ DE+ TR YRS E+L+G Y
Sbjct: 136 ----------TKHSV-----IKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
GP D+W+ C+ EL +G L+ GK D D L I + +G Q T
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLW---PGKS---DVDQLYLIRKTLGD-LIPRHQQVFSTN 233
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
+YF+ + + L K+ A L LH++ R + L
Sbjct: 234 QYFSGV-------KIPDPEDMEPLELKFPNISYPA---LGLLKGCLHMDPTERLTCEQLL 283
Query: 382 RHPWLN 387
HP+
Sbjct: 284 HHPYFE 289
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 1e-35
Identities = 95/388 (24%), Positives = 154/388 (39%), Gaps = 84/388 (21%)
Query: 14 PGGYCPVQIGD-LFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVY 67
+ V++GD F RY ++ +G G V ++D VA+K + +Q +
Sbjct: 45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 104
Query: 68 ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG 125
A A E+VL+K V H + +I LLN F + +V E+M
Sbjct: 105 AKRAYRELVLMKCVN-----H---------KNIISLLNVFTPQKTLEEFQDVYLVMELMD 150
Query: 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185
NL ++I + + + ++ Q+L G+ +LH+ IIH D+KP NI+
Sbjct: 151 ANLCQVI-QMELDHERMS---YLLYQMLCGIKHLHS-AGIIHRDLKPSNIV--------- 196
Query: 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--D 243
D ++KI D G A F
Sbjct: 197 --------------------------------VKS--DCTLKILDFGLARTAGTSFMMTP 222
Query: 244 EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ TR YR+ EV++G GY DIWS C+ E+ LF G++Y D ++
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYI---DQWNKVI 276
Query: 304 ELVGPIPKEVLSQ-GKKTLRYFTPQGNFRRID--NLKPWGLYQVLTEKYHWSKAEASDFA 360
E +G E + + Y + + + L P L+ +E +K +AS
Sbjct: 277 EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH---NKLKASQAR 333
Query: 361 DFLLPMLHVNQKLRASAADCLRHPWLNP 388
D L ML ++ R S D L+HP++N
Sbjct: 334 DLLSKMLVIDPAKRISVDDALQHPYINV 361
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-35
Identities = 68/372 (18%), Positives = 120/372 (32%), Gaps = 100/372 (26%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVG 82
+ +H + K+G G F +V+ D A+K K + V A E+ +G
Sbjct: 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIH 141
+ S+V +R + + H+ + E G +L I+ + +
Sbjct: 69 QHSHV-------------VRYFSAWA----EDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 142 IQ--NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ ++ ++ QV GL Y+H+ ++H DIKP NI +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFIS--------------------- 149
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG- 258
+ + + + KI DLG+ I E ++ + EVL
Sbjct: 150 ---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV-EEGDSRFLANEVLQEN 205
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
+ P ADI++ A A + R+ D I
Sbjct: 206 YTHLPKADIFALALTVVCAAG---------AEPLPRNGDQWHEI---------------- 240
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378
QG RI S+ +F + L M+H + + R SA
Sbjct: 241 -------RQGRLPRIPQ--------------VLSQ----EFTELLKVMIHPDPERRPSAM 275
Query: 379 DCLRHPWLNPRR 390
++H L
Sbjct: 276 ALVKHSVLLSAS 287
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 5e-35
Identities = 93/387 (24%), Positives = 146/387 (37%), Gaps = 92/387 (23%)
Query: 13 RPGGYCPVQI-GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQV 66
R G+ + + Y +G G + +V + D + VA+K + ++
Sbjct: 6 RKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 65
Query: 67 YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVM 124
+A A E++LLK + H E VI LL+ F S N +V M
Sbjct: 66 FAKRAYRELLLLKHMQ-----H---------ENVIGLLDVFTPASSLRNFYDFYLVMPFM 111
Query: 125 GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
+L +++ + IQ ++ Q+L+GL Y+H+ ++H D+KP N+
Sbjct: 112 QTDLQKIM-GLKFSEEKIQY---LVYQMLKGLKYIHS-AGVVHRDLKPGNLA-------- 158
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
NE D +KI D G A D
Sbjct: 159 ---------------------------------VNE--DCELKILDFGLARHADAEMTGY 183
Query: 245 IQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
+ TR YR+ EV++ Y DIWS C+ E+ TG LF GK+Y D L I+
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF---KGKDYL---DQLTQIL 237
Query: 304 ELVGPIPKEVLS--QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
++ G E + K Y R D T+ + + +A AD
Sbjct: 238 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKD----------FTQLFPRASPQA---AD 284
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLNP 388
L ML ++ R +AA L HP+ P
Sbjct: 285 LLEKMLELDVDKRLTAAQALTHPFFEP 311
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 5e-35
Identities = 76/379 (20%), Positives = 138/379 (36%), Gaps = 98/379 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTARDEIVLLKAVGRKSNV 87
RY ++ LG G V+ + D VA+K IV +D A EI +++ +
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLD----- 66
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTH----------ICMVFEVMGYNLLRLIARSDY 137
H + ++++ T + +V E M +L ++ +
Sbjct: 67 H---------DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL 117
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
H + + Q+L GL Y+H+ ++H D+KP N+
Sbjct: 118 LEEHARL---FMYQLLRGLKYIHS-ANVLHRDLKPANLF--------------------- 152
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA------DEIQTRQYR 251
+++ D+ +KI D G A +D H++ + + T+ YR
Sbjct: 153 -------INTE--------------DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR 191
Query: 252 SVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310
S +L+ Y A D+W+ C+ E+ TG LF AG + + I+E + +
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF---AGAHEL---EQMQLILESIPVVH 245
Query: 311 KEVLSQ-GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHV 369
+E + Y LT+ EA DFL +L
Sbjct: 246 EEDRQELLSVIPVYIRNDMTEPHKP----------LTQLLPGISREA---VDFLEQILTF 292
Query: 370 NQKLRASAADCLRHPWLNP 388
+ R +A + L HP+++
Sbjct: 293 SPMDRLTAEEALSHPYMSI 311
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 5e-35
Identities = 84/368 (22%), Positives = 138/368 (37%), Gaps = 85/368 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVG 82
RY + ++G G + TV+ + D FVALK V+ + E+ LL+ +
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL- 68
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNG-THICMVFEVMGYNLLRLIARSDYKGIH 141
++ H V+RL++ + + +VFE + +L + ++ G+
Sbjct: 69 -EAFEH---------PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ ++ +++Q L GL++LH I+H D+KPENIL+ G
Sbjct: 119 AETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILV-----------------TSGGT-- 158
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA 259
VK+AD G A + T YR+ EVL+ +
Sbjct: 159 ------------------------VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQS 194
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y D+WS C+ E+ LF G + D L I +L+G P E
Sbjct: 195 TYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFDLIGL-PPEDDWPRDV 247
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
+L P G + + + A LL ML N R SA
Sbjct: 248 SLPRGA----------FPPRG-PRPVQSVVPEMEESG---AQLLLEMLTFNPHKRISAFR 293
Query: 380 CLRHPWLN 387
L+H +L+
Sbjct: 294 ALQHSYLH 301
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 6e-35
Identities = 81/375 (21%), Positives = 133/375 (35%), Gaps = 91/375 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKS 85
+Y + +G G + V + VA+K + A EI LLK + R
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHE 84
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
N+ + LL + +VFE + + +L + G+ Q V
Sbjct: 85 NL-------------VNLLEVC----KKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVV 126
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + Q++ G+ + H+ IIH DIKPENIL+
Sbjct: 127 QKYLFQIINGIGFCHSH-NIIHRDIKPENILV---------------------------- 157
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGAG-Y 261
+ VK+ D G A + + + DE+ TR YR+ E+L+G Y
Sbjct: 158 ----------SQSGV-----VKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
G A D+W+ C+ E+ G+ LF G D D L HI+ +G +
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLF---PGDS---DIDQLYHIMMCLGN-LIPRHQELFNKN 255
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADC 380
F L + L +Y + S+ D LH++ R A+
Sbjct: 256 PVFAGV-------RLPEIKEREPLERRYP----KLSEVVIDLAKKCLHIDPDKRPFCAEL 304
Query: 381 LRHPWL--NPRRSHY 393
L H + + +
Sbjct: 305 LHHDFFQMDGFAERF 319
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 8e-35
Identities = 90/370 (24%), Positives = 147/370 (39%), Gaps = 81/370 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY ++ +G G V ++D + VA+K + +Q +A A E+VL+K V
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN--- 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGT--HICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H + +I LLN F + +V E+M NL ++I + + +
Sbjct: 83 --H---------KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMS 130
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ Q+L G+ +LH+ IIH D+KP NI+
Sbjct: 131 ---YLLYQMLCGIKHLHS-AGIIHRDLKPSNIV--------------------------- 159
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVLIGAGY 261
D ++KI D G A F + TR YR+ EV++G GY
Sbjct: 160 --------------VKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ-GKKT 320
DIWS C+ E+ G LF G ++ D ++E +G E + +
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLF---PGTDHI---DQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 321 LRYFTPQGNFRRID--NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378
Y + + L P L+ +E +K +AS D L ML ++ R S
Sbjct: 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEH---NKLKASQARDLLSKMLVIDASKRISVD 314
Query: 379 DCLRHPWLNP 388
+ L+HP++N
Sbjct: 315 EALQHPYINV 324
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-34
Identities = 87/368 (23%), Positives = 135/368 (36%), Gaps = 88/368 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + +V ++D + VA+K + ++A E+ LLK +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--- 86
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H E VI LL+ F + +V +MG +L ++ H+Q
Sbjct: 87 --H---------ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 135
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+I Q+L GL Y+H+ IIH D+KP N+
Sbjct: 136 F---LIYQILRGLKYIHS-ADIIHRDLKPSNLA--------------------------- 164
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYG 262
NE D +KI D G A D + TR YR+ E+++ Y
Sbjct: 165 --------------VNE--DCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS--QGKKT 320
DIWS C+ EL TG LF G ++ D L I+ LVG E+L +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKISSESA 262
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
Y +++ + + A D L ML ++ R +AA
Sbjct: 263 RNYIQSLTQMPKMN----------FANVFIGANPLA---VDLLEKMLVLDSDKRITAAQA 309
Query: 381 LRHPWLNP 388
L H +
Sbjct: 310 LAHAYFAQ 317
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 4e-34
Identities = 86/368 (23%), Positives = 134/368 (36%), Gaps = 88/368 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
Y ++ +G G + V + D + VA+K + +++A A E+ LLK +
Sbjct: 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR--- 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTH--ICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H E VI LL+ F +V MG +L +L+ IQ
Sbjct: 83 --H---------ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ 131
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ Q+L+GL Y+H IIH D+KP N+
Sbjct: 132 F---LVYQMLKGLRYIHA-AGIIHRDLKPGNLA--------------------------- 160
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYG 262
NE D +KI D G A D + TR YR+ EV++ Y
Sbjct: 161 --------------VNE--DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYT 204
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS--QGKKT 320
DIWS C+ E+ TG LF G ++ D L I+++ G P E + Q +
Sbjct: 205 QTVDIWSVGCIMAEMITGKTLF---KGSDHL---DQLKEIMKVTGTPPAEFVQRLQSDEA 258
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
Y + D + A + L ML ++ + R +A +
Sbjct: 259 KNYMKGLPELEKKD----------FASILTNASPLA---VNLLEKMLVLDAEQRVTAGEA 305
Query: 381 LRHPWLNP 388
L HP+
Sbjct: 306 LAHPYFES 313
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 6e-34
Identities = 83/398 (20%), Positives = 142/398 (35%), Gaps = 94/398 (23%)
Query: 5 QQESYMEYRPGGYCPVQIGDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK 62
+M + G +F+ RY + +G G + V ++D +K VA+K +
Sbjct: 2 HHHHHMAAAAAAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS 61
Query: 63 --SDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNG-THICM 119
Q Y EI +L H E +I + + + + + +
Sbjct: 62 PFEHQTYCQRTLREIKILLRFR-----H---------ENIIGINDIIRAPTIEQMKDVYI 107
Query: 120 VFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179
V ++M +L +L+ HI + Q+L GL Y+H+ ++H D+KP N+L
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHIC---YFLYQILRGLKYIHS-ANVLHRDLKPSNLL--- 160
Query: 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239
N +KI D G A D
Sbjct: 161 --------------------------------------LNT--TCDLKICDFGLARVADP 180
Query: 240 HFA------DEIQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
+ + TR YR+ E+++ + GY + DIWS C+ E+ + +F GK Y
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHY 237
Query: 293 SRDDDHLAHIVELVGPIPKEVLS--QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYH 350
D L HI+ ++G +E L+ K Y + ++ +
Sbjct: 238 L---DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP----------WNRLFP 284
Query: 351 WSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
+ ++A D L ML N R L HP+L
Sbjct: 285 NADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 8e-34
Identities = 83/374 (22%), Positives = 146/374 (39%), Gaps = 63/374 (16%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y +++KLG G + VW S D + VA+K + + A EI++L +
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL---- 65
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ H E ++ LLN + + N + +VF+ M +L +I + + +H Q
Sbjct: 66 SGH---------ENIVNLLNVLR--ADNDRDVYLVFDYMETDLHAVIRANILEPVHKQ-- 112
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ Q+++ + YLH+ ++H D+KP NIL+ +A H K+
Sbjct: 113 -YVVYQLIKVIKYLHS-GGLLHRDMKPSNILL------------NAECHVKVA------- 151
Query: 206 DSTMSDFSL-----LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA- 259
DF L + N D + TR YR+ E+L+G+
Sbjct: 152 -----DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS--QG 317
Y D+WS C+ E+ G +F G + L I+ ++ E + Q
Sbjct: 207 KYTKGIDMWSLGCILGEILCGKPIF---PGSSTM---NQLERIIGVIDFPSNEDVESIQS 260
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS--KAEASDFA-DFLLPMLHVNQKLR 374
I ++ KA+ ++ A D L +L N R
Sbjct: 261 PFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320
Query: 375 ASAADCLRHPWLNP 388
SA D L+HP+++
Sbjct: 321 ISANDALKHPFVSI 334
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 5e-33
Identities = 63/369 (17%), Positives = 114/369 (30%), Gaps = 113/369 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86
+ LG G T+ + D VA+K + + A E+ LL R+S+
Sbjct: 23 KISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECF--SFADREVQLL----RESD 75
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
H + VIR K + + E+ L + + D+ + ++
Sbjct: 76 EHPN---------VIRYFCTEK----DRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PI 121
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
T+++Q GL +LH+ I+H D+KP NI
Sbjct: 122 TLLQQTTSGLAHLHSL-NIVHRDLKPHNI------------------------------- 149
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSVEVLIG-- 258
L+ N I I+D G + + T + + E+L
Sbjct: 150 -------LISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC 202
Query: 259 -AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
DI+S C+ + + + + + A+I+ G
Sbjct: 203 KENPTYTVDIFSAGCVFYYVISEGSHP-------FGKSLQRQANIL------------LG 243
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
+L D L P H + + M+ ++ + R SA
Sbjct: 244 ACSL------------DCLHPEK---------HED----VIARELIEKMIAMDPQKRPSA 278
Query: 378 ADCLRHPWL 386
L+HP+
Sbjct: 279 KHVLKHPFF 287
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-32
Identities = 81/380 (21%), Positives = 131/380 (34%), Gaps = 100/380 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSN 86
+ + LG G + V + VA+K ++ ++A EI +LK
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK---- 67
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
H E +I + N + S N + ++ E+M +L R+I+ HIQ
Sbjct: 68 -H---------ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ-- 115
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
I Q L + LH +IH D+KP N+L
Sbjct: 116 -YFIYQTLRAVKVLHG-SNVIHRDLKPSNLL----------------------------- 144
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-------------TRQYRS 252
N + +K+ D G A ID+ AD + TR YR+
Sbjct: 145 ------------INS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 253 VEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PIP 310
EV++ + Y A D+WS C+ EL +F G++Y L I ++G P
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF---PGRDYR---HQLLLIFGIIGTPHS 244
Query: 311 KEVLS--QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
L + + Y + L + + + D L ML
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAP----------LEKMFPRVNPKG---IDLLQRMLV 291
Query: 369 VNQKLRASAADCLRHPWLNP 388
+ R +A + L HP+L
Sbjct: 292 FDPAKRITAKEALEHPYLQT 311
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-32
Identities = 74/377 (19%), Positives = 138/377 (36%), Gaps = 81/377 (21%)
Query: 29 RYHVIR-KLGWGHFSTVWLSWDLQDKT--FVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
+ K+G G + V+ + K ALK ++ + + +A EI LL+ +
Sbjct: 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELK--- 76
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI-------ARSDYK 138
H VI L S + ++F+ ++L +I A
Sbjct: 77 --H---------PNVISLQK--VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ V++++ Q+L+G++YLH ++H D+KP NIL+ + + R
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGR------------ 170
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRS 252
VKIAD+G A + + T YR+
Sbjct: 171 ---------------------------VKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 253 VEVLIGAG-YGPAADIWSTACMAFELATGDYLF---DPKAGKEYSRDDDHLAHIVELVGP 308
E+L+GA Y A DIW+ C+ EL T + +F D L I ++G
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGF 263
Query: 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
P + + K + + R + L + + + ++A L +L
Sbjct: 264 -PADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKA---FHLLQKLLT 319
Query: 369 VNQKLRASAADCLRHPW 385
++ R ++ ++ P+
Sbjct: 320 MDPIKRITSEQAMQDPY 336
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 9e-32
Identities = 69/382 (18%), Positives = 121/382 (31%), Gaps = 130/382 (34%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGR 83
Y +++++G G S V+ + + K A+K V ++D D+ R+EI L +
Sbjct: 27 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-- 83
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
Q S+K+IRL + Y +I MV E +L + + K I
Sbjct: 84 ----------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKK--KKSIDPW 127
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ K +LE ++ +H Q I+H+D+KP N L
Sbjct: 128 ERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFL--------------------------- 159
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ-----YRSVEVLIG 258
+ M +K+ D G A + ++ Q Y E +
Sbjct: 160 -IVDGM----------------LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 259 AG-----------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307
P +D+WS C+ + + G F + L I++
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNH 257
Query: 308 PIPK-EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPM 366
I ++ + D D L
Sbjct: 258 EIEFPDIPEK-----------------------------------------DLQDVLKCC 276
Query: 367 LHVNQKLRASAADCLRHPWLNP 388
L + K R S + L HP++
Sbjct: 277 LKRDPKQRISIPELLAHPYVQI 298
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-31
Identities = 68/385 (17%), Positives = 120/385 (31%), Gaps = 130/385 (33%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA---RDEIVLLKAVGR 83
Y +++++G G S V+ + + K A+K V ++ T R+EI L +
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-- 64
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
Q S+K+IRL + Y +I MV E +L + + K I
Sbjct: 65 ----------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKK--KKSIDPW 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ K +LE ++ +H Q I+H+D+KP N L
Sbjct: 109 ERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFL--------------------------- 140
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ-----YRSVEVLIG 258
+ M +K+ D G A + ++ Q Y E +
Sbjct: 141 -IVDGM----------------LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 259 AG-----------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307
P +D+WS C+ + + G F + L I++
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNH 238
Query: 308 PIPK-EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPM 366
I ++ + D D L
Sbjct: 239 EIEFPDIPEK-----------------------------------------DLQDVLKCC 257
Query: 367 LHVNQKLRASAADCLRHPWLNPRRS 391
L + K R S + L HP++ +
Sbjct: 258 LKRDPKQRISIPELLAHPYVQIQTH 282
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 2e-31
Identities = 79/370 (21%), Positives = 140/370 (37%), Gaps = 91/370 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQD-KTFVALKIVKSDQVYAD-----TARDEIVLLKAVG 82
+Y + ++G G + V+ + DL++ FVALK V+ + + E+ +L+ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIREVAVLRHL- 68
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDF-KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
++ H V+RL + + T + +VFE + +L + + G+
Sbjct: 69 -ETFEH---------PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ ++ ++ Q+L GL++LH+ R++H D+KP+NIL+
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILV------------------------ 153
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA 259
S+ +K+AD G A + T YR+ EVL+ +
Sbjct: 154 ----TSSG---------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y D+WS C+ E+ LF G D D L I++++G P E
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLF---RGS---SDVDQLGKILDVIGL-PGEEDWPRDV 247
Query: 320 TLRYFT-PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
L + + I+ + D LL L N R SA
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTD----------------IDELGKDLLLKCLTFNPAKRISA 291
Query: 378 ADCLRHPWLN 387
L HP+
Sbjct: 292 YSALSHPYFQ 301
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-31
Identities = 68/385 (17%), Positives = 120/385 (31%), Gaps = 130/385 (33%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA---RDEIVLLKAVGR 83
Y +++++G G S V+ + + K A+K V ++ T R+EI L +
Sbjct: 55 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-- 111
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
Q S+K+IRL + Y +I MV E +L + + K I
Sbjct: 112 ----------QQHSDKIIRLYD----YEITDQYIYMVMECGNIDLNSWLKK--KKSIDPW 155
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ K +LE ++ +H Q I+H+D+KP N L
Sbjct: 156 ERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFL--------------------------- 187
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ-----YRSVEVLIG 258
+ D +K+ D G A + ++ Q Y E +
Sbjct: 188 -IV----------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 259 AG-----------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307
P +D+WS C+ + + G F + L I++
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNH 285
Query: 308 PIPK-EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPM 366
I ++ + D D L
Sbjct: 286 EIEFPDIPEK-----------------------------------------DLQDVLKCC 304
Query: 367 LHVNQKLRASAADCLRHPWLNPRRS 391
L + K R S + L HP++ +
Sbjct: 305 LKRDPKQRISIPELLAHPYVQIQTH 329
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-30
Identities = 74/369 (20%), Positives = 127/369 (34%), Gaps = 81/369 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
R+ V R G G F TV L + VA+K V D + + + L + H
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH-----H 78
Query: 89 SSAYNTQASEKVIRLLNDFKIYSR---NGTHICMVFEVMGYNLLRLIARSDYKGIHIQN- 144
+++L + F ++ +V E + L R + +
Sbjct: 79 ---------PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI 129
Query: 145 -VRTIIKQVLEGLNYLHTQC-RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++ + Q++ + LH + H DIKP N+L
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL-------------------------- 163
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGA- 259
++ A+ +K+ D G+A + + I +R YR+ E++ G
Sbjct: 164 ------------VNEADGT----LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQ 207
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y A DIWS C+ E+ G+ +F G + L IV ++G +E
Sbjct: 208 HYTTAVDIWSVGCIFAEMMLGEPIF---RGDNSA---GQLHEIVRVLGCPSRE------- 254
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
LR P + N K V ++ EA D L +L + R +
Sbjct: 255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEA---YDLLSALLQYLPEERMKPYE 311
Query: 380 CLRHPWLNP 388
L HP+ +
Sbjct: 312 ALCHPYFDE 320
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-30
Identities = 62/383 (16%), Positives = 109/383 (28%), Gaps = 91/383 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGR 83
N + + LG G + V+ + A+K+ + E +LK +
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN- 65
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIH 141
H + +++L H ++ E +L L S+ G+
Sbjct: 66 ----H---------KNIVKLF-AI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP 110
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+++ V+ G+N+L I+H +IKP NI+ + D
Sbjct: 111 ESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDG------------------ 151
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGA 259
K+ D G A ++D F T +Y ++ A
Sbjct: 152 ---------------------QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 260 --------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
YG D+WS + ATG F P G K
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG-----------------PRRNK 233
Query: 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQ 371
EV+ + G + + W + S+ L +L +Q
Sbjct: 234 EVMYKIITGKPSGAISGVQKAENGPIDWS--GDMPVSCSLSRGLQVLLTPVLANILEADQ 291
Query: 372 KLRASAADCLRHPW--LNPRRSH 392
+ L+ SH
Sbjct: 292 EKCWGFDQFFAETSDILHRGNSH 314
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-30
Identities = 76/397 (19%), Positives = 125/397 (31%), Gaps = 99/397 (24%)
Query: 13 RPGGYCPVQI-GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
G + +L Y V R + G + V D + VA+K V +
Sbjct: 4 AKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGR 62
Query: 70 TARD------------EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNG-TH 116
T EI LL H ++ L + F +
Sbjct: 63 TVNILSDSFLCKRVLREIRLLNHFH-----H---------PNILGLRDIFVHFEEPAMHK 108
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
+ +V E+M +L ++I I Q+++ + +L GL+ LH ++H D+ P NIL
Sbjct: 109 LYLVTELMRTDLAQVI-HDQRIVISPQHIQYFMYHILLGLHVLHE-AGVVHRDLHPGNIL 166
Query: 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA-- 234
+ + + I D A
Sbjct: 167 -----------------------------------------LAD--NNDITICDFNLARE 183
Query: 235 CWIDDHFADEIQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYS 293
D + + R YR+ E+++ G+ D+WS C+ E+ LF G +
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF---RGSTFY 240
Query: 294 RDDDHLAHIVELVGPIPKEVLS--QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHW 351
+ L IVE+VG E + Y + N + T
Sbjct: 241 ---NQLNKIVEVVGTPKIEDVVMFSSPSARDY---------LRNSLSNVPARAWTAVVPT 288
Query: 352 SKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
+ A D + ML N + R S LRHP+
Sbjct: 289 ADPVA---LDLIAKMLEFNPQRRISTEQALRHPYFES 322
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 1e-30
Identities = 71/371 (19%), Positives = 129/371 (34%), Gaps = 90/371 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y + +G G F V+ + VA+K V D+ + R E+ +++ + H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--KNR-ELQIMRKLD-----H 106
Query: 89 SSAYNTQASEKVIRLLNDF--KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN-- 144
++RL F ++ ++ +V + + + R+ +
Sbjct: 107 ---------CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+ L Y+H+ I H DIKP+N+
Sbjct: 158 VKLYMYQLFRSLAYIHSF-GICHRDIKPQNL----------------------------- 187
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNA--CWIDDHFADEIQTRQYRSVEVLIGA-GY 261
LLDP V +K+ D G+A + I +R YR+ E++ GA Y
Sbjct: 188 ---------LLDPDTAV----LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 234
Query: 262 GPAADIWSTAC-MAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
+ D+WS C +A EL G +F G D L I++++G +E
Sbjct: 235 TSSIDVWSAGCVLA-ELLLGQPIF---PGDSGV---DQLVEIIKVLGTPTRE-------Q 280
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAAD 379
+R P + +K +V + A +L R + +
Sbjct: 281 IREMNPNYTEFKFPQIKAHPWTKVFRPR-------TPPEAIALCSRLLEYTPTARLTPLE 333
Query: 380 CLRHPWLNPRR 390
H + + R
Sbjct: 334 ACAHSFFDELR 344
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-30
Identities = 79/368 (21%), Positives = 140/368 (38%), Gaps = 88/368 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD-----TARDEIVLLKAVGR 83
RY I KLG G + V+ + D VA+K ++ + + TA E+ LLK +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPGTAIREVSLLKELQ- 91
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H + +I L + + + ++FE +L + + + ++
Sbjct: 92 ----HRN---------IIELKSVI----HHNHRLHLIFEYAENDLKKYM--DKNPDVSMR 132
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+++ + Q++ G+N+ H++ R +H D+KP+N+L+ + + +
Sbjct: 133 VIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLL------------SVSDASETPV---- 175
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA- 259
+KI D G A F EI T YR E+L+G+
Sbjct: 176 ----------------------LKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y + DIWS AC+ E+ LF G + D L I E++G P + G
Sbjct: 214 HYSTSVDIWSIACIWAEMLMKTPLF---PGDS---EIDQLFKIFEVLGL-PDDTTWPGVT 266
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
L + + + + E D L ML ++ R SA +
Sbjct: 267 ALPDWKQ--------SFPKFRGKTLKRVLGALLDDEG---LDLLTAMLEMDPVKRISAKN 315
Query: 380 CLRHPWLN 387
L HP+ +
Sbjct: 316 ALEHPYFS 323
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-30
Identities = 82/367 (22%), Positives = 132/367 (35%), Gaps = 93/367 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYAD----TARDEIVLLKAVG 82
RY + LG G F+TV+ + D VA+K +K D TA EI LL+ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL- 69
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
N +I LL+ F + ++I +VF+ M +L +I + +
Sbjct: 70 SHPN-------------IIGLLDAF----GHKSNISLVFDFMETDLEVIIKDNS-LVLTP 111
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+++ + L+GL YLH I+H D+KP N+L+
Sbjct: 112 SHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLL------------------------- 145
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA 259
D +K+AD G A + ++ TR YR+ E+L GA
Sbjct: 146 -------------DENGV-----LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA 187
Query: 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
YG D+W+ C+ EL G D D L I E +G P E
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFL---PGD---SDLDQLTRIFETLGT-PTEEQWPDM 240
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378
+L + K + L + + + D + + N R +A
Sbjct: 241 CSLPDYV---------TFKSFP-GIPLHHIFSAAGDDL---LDLIQGLFLFNPCARITAT 287
Query: 379 DCLRHPW 385
L+ +
Sbjct: 288 QALKMKY 294
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 7e-30
Identities = 83/374 (22%), Positives = 144/374 (38%), Gaps = 93/374 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVGRK 84
Y + KLG G ++TV+ VALK ++ + + TA E+ LLK + +
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDL-KH 59
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
+N ++ L + + +VFE + +L + + I++ N
Sbjct: 60 AN-------------IVTLHDII----HTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHN 101
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V+ + Q+L GL Y H Q +++H D+KP+N+L+
Sbjct: 102 VKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLI--------------------------- 133
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260
+ E +K+AD G A + +E+ T YR ++L+G+
Sbjct: 134 -----------NERGE-----LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y D+W C+ +E+ATG LF G ++ L I ++G P E G +
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLF---PGST---VEEQLHFIFRILGT-PTEETWPGILS 230
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
F N + + L ++ AD L +L + R SA D
Sbjct: 231 NEEFKTY-------NYPKY-RAEALLSHAPRLDSDG---ADLLTKLLQFEGRNRISAEDA 279
Query: 381 LRHPWLN--PRRSH 392
++HP+ R H
Sbjct: 280 MKHPFFLSLGERIH 293
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-29
Identities = 69/380 (18%), Positives = 112/380 (29%), Gaps = 125/380 (32%)
Query: 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---DTAR 72
GY P + F + + +LG G + V+ +D A+K S
Sbjct: 45 GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKL 104
Query: 73 DEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI 132
E+ + VG+ +RL ++ G + + E+ G +L +
Sbjct: 105 AEVGSHEKVGQHPC-------------CVRLEQAWE----EGGILYLQTELCGPSLQQHC 147
Query: 133 ARSDYKGIHIQ--NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190
G + V ++ L L +LH+Q ++H D+KP NI
Sbjct: 148 EA---WGASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANI--------------- 188
Query: 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ--TR 248
L P K+ D G + A E+Q
Sbjct: 189 -----------------------FLGPRGR-----CKLGDFGLLVELGTAGAGEVQEGDP 220
Query: 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE--LV 306
+Y + E+L G YG AAD++S E+A L + + + L
Sbjct: 221 RYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH---------GGEGWQQLRQGYLP 270
Query: 307 GPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPM 366
S S+ L+ M
Sbjct: 271 PEFTA--------------------------------------GLS----SELRSVLVMM 288
Query: 367 LHVNQKLRASAADCLRHPWL 386
L + KLRA+A L P L
Sbjct: 289 LEPDPKLRATAEALLALPVL 308
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 3e-29
Identities = 83/367 (22%), Positives = 142/367 (38%), Gaps = 91/367 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVGRK 84
+Y + K+G G + V+ + D Q + VALK ++ D + TA EI LLK +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDA-EDEGIPSTAIREISLLKELH-- 77
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
H ++ L++ + + +VFE M +L +++ + G+
Sbjct: 78 ---H---------PNIVSLIDVI----HSERCLTLVFEFMEKDLKKVL-DENKTGLQDSQ 120
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
++ + Q+L G+ + H RI+H D+KP+N+L+
Sbjct: 121 IKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLI--------------------------- 152
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260
+S + +K+AD G A + E+ T YR+ +VL+G+
Sbjct: 153 -NSDGA---------------LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y + DIWS C+ E+ TG LF G DDD L I ++G P +
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLF---PGVT---DDDQLPKIFSILGT-PNPREWPQVQE 249
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
L + + + + + E D L ML + R SA D
Sbjct: 250 LPLWKQ-------RTFQVF-EKKPWSSIIPGFCQEG---IDLLSNMLCFDPNKRISARDA 298
Query: 381 LRHPWLN 387
+ HP+
Sbjct: 299 MNHPYFK 305
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 4e-29
Identities = 84/368 (22%), Positives = 141/368 (38%), Gaps = 92/368 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVGRK 84
+Y + K+G G + TV+ + + + VALK V+ D + +A EI LLK + +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKEL-KH 60
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
N+ +RL + + + +VFE +L + S + +
Sbjct: 61 KNI-------------VRLHDVL----HSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEI 102
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
V++ + Q+L+GL + H++ ++H D+KP+N+L+
Sbjct: 103 VKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLI--------------------------- 134
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260
+ +K+A+ G A ++ E+ T YR +VL GA
Sbjct: 135 -NRNG---------------ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y + D+WS C+ ELA G LF G + DD L I L+G P E
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLF---PGND---VDDQLKRIFRLLGT-PTEEQWPSMT 231
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
L + P + L A D L +L N R SA +
Sbjct: 232 KLPDYKP---------YPMYPATTSLVNVVPKLNATG---RDLLQNLLKCNPVQRISAEE 279
Query: 380 CLRHPWLN 387
L+HP+ +
Sbjct: 280 ALQHPYFS 287
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 5e-29
Identities = 39/390 (10%), Positives = 95/390 (24%), Gaps = 114/390 (29%)
Query: 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV----KSDQVYADTARDEIVLLKAVGR 83
+ ++ L G S V+L D++ ALK+ ++ + + + +
Sbjct: 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121
Query: 84 KSNVHSSAYN----------TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIA 133
+S + Q+ +L Y+ + ++ +L L +
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAV--ANYLLLMPAASVDLELLFS 179
Query: 134 RSDYKGIH-----IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
D+ + I + + Q++ L ++ ++H P+N+ + D
Sbjct: 180 TLDFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHGHFTPDNLFIMPDG------- 231
Query: 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
+ + D+ +
Sbjct: 232 ------------------------------------RLMLGDVSALWKVGTRGPASSVPV 255
Query: 249 QYRSVEVL--IGAGYGPAADIWSTACMAFELATGDYLFD---PKAGKEYSRDDDHLAHIV 303
Y E L A + A + W + + F P + R +
Sbjct: 256 TYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTD 315
Query: 304 ELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DF 362
L + DF
Sbjct: 316 SLAFGSCTPL-------------------------------------------PDFVKTL 332
Query: 363 LLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
+ L+ +++ R + + P ++
Sbjct: 333 IGRFLNFDRRRRLLPLEAMETPEFLQLQNE 362
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-28
Identities = 70/368 (19%), Positives = 120/368 (32%), Gaps = 85/368 (23%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
+ + I LG G F V + + D + A+K ++ + T E++LL ++
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQ 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ- 143
V Y + + + + + E L LI + ++ Q
Sbjct: 63 YV-VRYYAAWLERRNFVKPMT---AVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQR 115
Query: 144 -NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ +Q+LE L+Y+H+Q IIH D+KP NI + D +++ KIG
Sbjct: 116 DEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFI------------DESRNVKIG---- 158
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG-Y 261
DF L N + + D N D+ I T Y + EVL G G Y
Sbjct: 159 --------DFGL--AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
D++S + FE+ G E +I+ + L
Sbjct: 209 NEKIDMYSLGIIFFEMIYP-----FSTGME-------RVNIL--------KKLRSVSIE- 247
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
F P + + + ++ + R A L
Sbjct: 248 --FPP-----------------------DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
Query: 382 RHPWLNPR 389
WL +
Sbjct: 283 NSGWLPVK 290
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 2e-28
Identities = 78/370 (21%), Positives = 132/370 (35%), Gaps = 98/370 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKT--FVALKIVKSDQVYAD-----TARDEIVLLKAV 81
+YH + K+G G + V+ + Q+ ALK ++ ++ D T EI +LK +
Sbjct: 3 KYHGLEKIGEGTYGVVYKA---QNNYGETFALKKIRLEK--EDEGIPSTTIREISILKEL 57
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
H +++L + + +VFE + +L +L+ G+
Sbjct: 58 K-----H---------SNIVKLYDVI----HTKKRLVLVFEHLDQDLKKLL-DVCEGGLE 98
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
++ + Q+L G+ Y H + R++H D+KP+N+L+
Sbjct: 99 SVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLI------------------------ 133
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258
+ E+ KIAD G A + EI T YR+ +VL+G
Sbjct: 134 --------------NREGEL-----KIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
+ Y DIWS C+ E+ G LF G + D L I ++G P
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLF---PGVS---EADQLMRIFRILGT-PNSKNWPN 227
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
L + P N + D L ML ++ R +A
Sbjct: 228 VTELPKYDP--------NFTVY-EPLPWESFLKGLDESG---IDLLSKMLKLDPNQRITA 275
Query: 378 ADCLRHPWLN 387
L H +
Sbjct: 276 KQALEHAYFK 285
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 82/397 (20%), Positives = 140/397 (35%), Gaps = 93/397 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYAD-TARDEIVLLKAVGRK 84
Y + +G G + V+L++D + VA+K V D + R EI +L +
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLK-- 83
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNG-THICMVFEVMGYNLLRLIARSDY-KGIHI 142
+ +IRL + + +V E+ +L +L + HI
Sbjct: 84 ---S---------DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHI 131
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ TI+ +L G N++H IIH D+KP N L+ + K+
Sbjct: 132 K---TILYNLLLGENFIHE-SGIIHRDLKPANCLL------------NQDCSVKVC---- 171
Query: 203 MSLDSTMSDFSL------LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVL 256
DF L N V D+ + + + TR YR+ E++
Sbjct: 172 --------DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI 223
Query: 257 IGA-GYGPAADIWSTACMAFELATGDY-----------LF----------DPKAGKEYSR 294
+ Y + DIWST C+ EL LF D + K + +
Sbjct: 224 LLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEK 283
Query: 295 DD-DHLAHIVELVGPIPKEVLS--QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHW 351
+ D L I ++G ++ L + ++Y + + I+ L +KY
Sbjct: 284 SNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN----------LKQKYPS 333
Query: 352 SKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
+ + L ML N R + L HP+L
Sbjct: 334 ISDDG---INLLESMLKFNPNKRITIDQALDHPYLKD 367
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-28
Identities = 73/367 (19%), Positives = 138/367 (37%), Gaps = 85/367 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y ++RKLG G +S V+ + ++ + V +KI+K V + EI +L+
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK--PVKKKKIKREIKILE--------- 85
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR-SDYKGIHIQNVRT 147
N + +I L + K + T + V + +L +DY I+
Sbjct: 86 ----NLRGGPNIITLADIVKDPV-SRTPALVFEHVNNTDFKQLYQTLTDY---DIRF--- 134
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ ++L+ L+Y H+ I+H D+KP N+
Sbjct: 135 YMYEILKALDYCHSM-GIMHRDVKPHNV-------------------------------- 161
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGA-GYGPA 264
++D + +++ D G A + + + +R ++ E+L+ Y +
Sbjct: 162 ------MIDHEHR----KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 211
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG-PIPKEVLS--QGKKTL 321
D+WS CM + F G + D L I +++G + + +
Sbjct: 212 LDMWSLGCMLASMIFRKEPFFH--GHDN---YDQLVRIAKVLGTEDLYDYIDKYNIELDP 266
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
R+ G R K W + V +E H EA DFL +L + + R +A + +
Sbjct: 267 RFNDILGRHSR----KRWERF-VHSENQHLVSPEA---LDFLDKLLRYDHQSRLTAREAM 318
Query: 382 RHPWLNP 388
HP+
Sbjct: 319 EHPYFYT 325
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 4e-28
Identities = 70/367 (19%), Positives = 131/367 (35%), Gaps = 80/367 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD-----TARDEIVLLKAVGR 83
+Y + K+G G F V+ + + VALK V + TA EI +L+ +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIKILQLLK- 74
Query: 84 KSNVHSSAYNTQASEKVIRLL----NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
H + V+ L+ Y+R I +VF+ ++L L++ K
Sbjct: 75 ----HEN---------VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 120
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ ++ +++ +L GL Y+H +I+H D+K N+L+ K+
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLI------------TRDGVLKLA- 166
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
DF L A + ++ + + + T YR E+L+G
Sbjct: 167 -----------DFGL---ARA-FSLAKNSQPN--------RYTNRVVTLWYRPPELLLGE 203
Query: 260 -GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
YGP D+W C+ E+ T + G + LA I +L G +
Sbjct: 204 RDYGPPIDLWGAGCIMAEMWTRSPIM---QGNT---EQHQLALISQLCGS-ITPEVWPNV 256
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378
+ L + + ++ + D + +L ++ R +
Sbjct: 257 DNYELYEKL-------ELVKG-QKRKVKDRLKAYVRDPYAL-DLIDKLLVLDPAQRIDSD 307
Query: 379 DCLRHPW 385
D L H +
Sbjct: 308 DALNHDF 314
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 5e-28
Identities = 89/373 (23%), Positives = 147/373 (39%), Gaps = 94/373 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVGRK 84
++ + KLG G ++TV+ + +VALK VK D + TA EI L+K + +
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKEL-KH 62
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLI----ARSDYKGI 140
N+ +RL + + +VFE M +L + + + +G+
Sbjct: 63 ENI-------------VRLYDVI----HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL 105
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ V+ Q+L+GL + H +I+H D+KP+N+L+
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLI----------------------- 141
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257
+ + +K+ D G A F+ E+ T YR+ +VL+
Sbjct: 142 ---------------NKRGQ-----LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM 181
Query: 258 GA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
G+ Y + DIWS C+ E+ TG LF G D++ L I +++G P E L
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLF---PGTN---DEEQLKLIFDIMGT-PNESLWP 234
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA--DFLLPMLHVNQKLR 374
L + P + L + E D DFL +L +N +R
Sbjct: 235 SVTKLPKYNPN---------IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMR 285
Query: 375 ASAADCLRHPWLN 387
SA L HPW
Sbjct: 286 LSAKQALHHPWFA 298
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 6e-28
Identities = 76/381 (19%), Positives = 132/381 (34%), Gaps = 93/381 (24%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
++G+L + + I +LG G+ V+ +A K++ + R++I+
Sbjct: 26 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQ 83
Query: 81 VGRKSNVHSSAYNTQASEKVIR----LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD 136
V + N S ++ +D +I ICM E M L + +
Sbjct: 84 VLHECN----------SPYIVGFYGAFYSDGEIS------ICM--EHMDGGSLDQVLK-K 124
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
I Q + + V++GL YL + +I+H D+KP NIL+ +
Sbjct: 125 AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE-------------- 170
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQTRQYRSVEV 255
+K+ D G + + D A+ + TR Y S E
Sbjct: 171 -----------------------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 201
Query: 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
L G Y +DIWS E+A G Y P KE + G + +
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE----------LMFGCQVEGDAA 251
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLT----------EKYHWSKAEASDFADFLLP 365
+ R N +D+ P ++++L +S +F DF+
Sbjct: 252 ETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL----EFQDFVNK 307
Query: 366 MLHVNQKLRASAADCLRHPWL 386
L N RA + H ++
Sbjct: 308 CLIKNPAERADLKQLMVHAFI 328
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 8e-28
Identities = 60/378 (15%), Positives = 119/378 (31%), Gaps = 128/378 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---DTARDEIVLLKAVGRKS 85
+Y ++K+G G F L +D +K + ++ + + +R E+ +L +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM---K 81
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLIARSDYKGIH 141
+ + +++ F+ + + VM Y +L + I KG+
Sbjct: 82 HPN-----------IVQYRESFE----ENGSLYI---VMDYCEGGDLFKRINA--QKGVL 121
Query: 142 I--QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ Q+ L ++H + +I+H DIK +NI + TK
Sbjct: 122 FQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL--------------TKDG---- 162
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ----YRSVEV 255
+V++ D G A ++ + + Y S E+
Sbjct: 163 -------------------------TVQLGDFGIARVLNST-VELARACIGTPYYLSPEI 196
Query: 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
Y +DIW+ C+ +EL T + F+ + LV I
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFEAG-------------SMKNLVLKIIS---- 239
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
G+F + H+S D + + N + R
Sbjct: 240 ------------GSFPPVSL--------------HYS----YDLRSLVSQLFKRNPRDRP 269
Query: 376 SAADCLRHPWLNPRRSHY 393
S L ++ R +
Sbjct: 270 SVNSILEKGFIAKRIEKF 287
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 9e-28
Identities = 60/375 (16%), Positives = 106/375 (28%), Gaps = 91/375 (24%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGR 83
N + + LG G + V+ + A+K+ + E +LK +
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN- 65
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIH 141
H + +++L H ++ E +L L S+ G+
Sbjct: 66 ----H---------KNIVKLF-AI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP 110
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+++ V+ G+N+L I+H +IKP NI+ + D
Sbjct: 111 ESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDG------------------ 151
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGA 259
K+ D G A ++D F T +Y ++ A
Sbjct: 152 ---------------------QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 260 --------GYGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGPIP 310
YG D+WS + ATG L F P G
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATG-SLPFRPFEG-----------------PRRN 232
Query: 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVN 370
KEV+ + G + + W + S+ L +L +
Sbjct: 233 KEVMYKIITGKPSGAISGVQKAENGPIDWS--GDMPVSCSLSRGLQVLLTPVLANILEAD 290
Query: 371 QKLRASAADCLRHPW 385
Q+
Sbjct: 291 QEKCWGFDQFFAETS 305
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 68/381 (17%), Positives = 124/381 (32%), Gaps = 114/381 (29%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
+ LG+G TV Q + VA+K + D D A EI LL +S
Sbjct: 13 LKNLVVSEKILGYGSSGTVVFQGSFQGRP-VAVKRMLIDFC--DIALMEIKLL----TES 65
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY-----KGI 140
+ H + VIR + + E+ NL L+ + K
Sbjct: 66 DDHPN---------VIRYYCSET----TDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 112
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
N ++++Q+ G+ +LH+ +IIH D+KP+NIL+
Sbjct: 113 KEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILV----------------------- 148
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTR----QYRSV 253
+ S D ++ + I+D G +D F + +R+
Sbjct: 149 -------STSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201
Query: 254 EVLIGA-------GYGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVEL 305
E+L + + DI+S C+ + + + F K
Sbjct: 202 ELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK------------------ 243
Query: 306 VGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365
++ + N R G++ + K ++ ++ D +
Sbjct: 244 ------------------YSRESNIIR-------GIFSLDEMKCLHDRSLIAEATDLISQ 278
Query: 366 MLHVNQKLRASAADCLRHPWL 386
M+ + R +A LRHP
Sbjct: 279 MIDHDPLKRPTAMKVLRHPLF 299
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 2e-27
Identities = 62/382 (16%), Positives = 112/382 (29%), Gaps = 127/382 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---DTARDEIVLLKAVGRKS 85
Y V+ +G G + D + K + + E+ LL+ +
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL---- 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLIARSDYKGIH 141
H ++R + R T + + VM Y +L +I + + +
Sbjct: 63 -KH---------PNIVRYYDRI--IDRTNTTLYI---VMEYCEGGDLASVITKGTKERQY 107
Query: 142 I--QNVRTIIKQVLEGLNYLHTQ----CRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195
+ + V ++ Q+ L H + ++H D+KP N+ +
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--------------DGKQ 153
Query: 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ----YR 251
+VK+ D G A ++ +T Y
Sbjct: 154 -----------------------------NVKLGDFGLARILNHD-TSFAKTFVGTPYYM 183
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311
S E + Y +DIWS C+ +EL F EL G I +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-------------SQKELAGKIRE 230
Query: 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQ 371
G FRRI +S + + + ML++
Sbjct: 231 ----------------GKFRRIPY--------------RYSD----ELNEIITRMLNLKD 256
Query: 372 KLRASAADCLRHPWLNPRRSHY 393
R S + L +P + H+
Sbjct: 257 YHRPSVEEILENPLILEHHHHH 278
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 3e-27
Identities = 74/387 (19%), Positives = 134/387 (34%), Gaps = 90/387 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK--------- 79
+Y + + LG G F V +D++ ALK V D Y R E+ ++K
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--KNR-ELDIMKVLDHVNIIK 64
Query: 80 -----------AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNL 128
+ V + ++ ++ E + L
Sbjct: 65 LVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTL 124
Query: 129 LRLIARSDYKG--IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
+++ G I + + I Q+ + ++H+ I H DIKP+N+L
Sbjct: 125 HKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-GICHRDIKPQNLL---------- 173
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADE 244
++ + +K+ D G+A + +
Sbjct: 174 ----------------------------VNSKDNT----LKLCDFGSAKKLIPSEPSVAY 201
Query: 245 IQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIV 303
I +R YR+ E+++GA Y P+ D+WS C+ EL G LF +G+ D L I+
Sbjct: 202 ICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF---SGETSI---DQLVRII 255
Query: 304 ELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFL 363
+++G KE + P R LK + + + S D L
Sbjct: 256 QIMGTPTKE-------QMIRMNPHYTEVRFPTLKA----KDWRKILP--EGTPSLAIDLL 302
Query: 364 LPMLHVNQKLRASAADCLRHPWLNPRR 390
+L LR + + + HP+ + R
Sbjct: 303 EQILRYEPDLRINPYEAMAHPFFDHLR 329
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 5e-27
Identities = 79/377 (20%), Positives = 141/377 (37%), Gaps = 87/377 (23%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA 80
+ G+ Y + +G G F V+ + ++ VA+K V D+ + R E+ +++
Sbjct: 33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF--KNR-ELQIMRI 88
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDF--KIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
V H V+ L F ++ + +V E + + R
Sbjct: 89 VK-----H---------PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL 134
Query: 139 G--IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
+ + ++ + Q+L L Y+H+ I H DIKP+N+L
Sbjct: 135 KQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLL-------------------- 173
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVE 254
LDP + V +K+ D G+A + + I +R YR+ E
Sbjct: 174 ------------------LDPPSGV----LKLIDFGSAKILIAGEPNVSYICSRYYRAPE 211
Query: 255 VLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
++ GA Y DIWST C+ EL G LF G+ D L I++++G +E
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLF---PGESGI---DQLVEIIKVLGTPSRE- 264
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
++ P + ++P +V + D D + +L
Sbjct: 265 ------QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTP------PDAIDLISRLLEYTPSA 312
Query: 374 RASAADCLRHPWLNPRR 390
R +A + L HP+ + R
Sbjct: 313 RLTAIEALCHPFFDELR 329
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 5e-27
Identities = 68/380 (17%), Positives = 112/380 (29%), Gaps = 98/380 (25%)
Query: 13 RPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTA 71
R Y + + N Y I+KLG G FS V L L D F ALK + +Q + A
Sbjct: 14 RENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA 73
Query: 72 RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLR 130
+ E + + H ++RL+ ++ L
Sbjct: 74 QREADMHRLFN-----H---------PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWN 119
Query: 131 LIARSDYKGIHI--QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
I R KG + + ++ + GL +H + H D+KP NIL+
Sbjct: 120 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILL----------- 167
Query: 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
+ D ++ A + S + L +A + T
Sbjct: 168 -GDEGQPVLM------------DLGSMNQACIHVEGSRQALTL-------QDWAAQRCTI 207
Query: 249 QYRSVEVLIGAGY---GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL 305
YR+ E+ + D+WS C+ + + G+ +D + D +A V
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD-----MVFQKGDSVALAV-- 260
Query: 306 VGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365
Q + PQ S S L
Sbjct: 261 ----------QNQ----LSIPQSP--------------------RHS----SALWQLLNS 282
Query: 366 MLHVNQKLRASAADCLRHPW 385
M+ V+ R L
Sbjct: 283 MMTVDPHQRPHIPLLLSQLE 302
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 6e-27
Identities = 69/358 (19%), Positives = 123/358 (34%), Gaps = 110/358 (30%)
Query: 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSNVHSSA 91
++G G F TV+ D + VA ++ ++ + E +LK +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL---------- 82
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIK 150
++R + ++ + I +V E+M L + R +K + I+ +R+ +
Sbjct: 83 ----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCR 136
Query: 151 QVLEGLNYLHTQ-CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
Q+L+GL +LHT+ IIH D+K +NI + G
Sbjct: 137 QILKGLQFLHTRTPPIIHRDLKCDNIF--IT--------------GPTG----------- 169
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-TRQYRSVEVLIGAGYGPAADIW 268
SVKI DLG A FA + T ++ + E+ Y + D++
Sbjct: 170 ---------------SVKIGDLGLATLKRASFAKAVIGTPEFMAPEM-YEEKYDESVDVY 213
Query: 269 STACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328
+ E+AT +Y P YS + + A I V
Sbjct: 214 AFGMCMLEMATSEY---P-----YS-ECQNAAQIYRRVT--------------------- 243
Query: 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
+KP +V + + + + N+ R S D L H +
Sbjct: 244 -----SGVKPASFDKVAIP----------EVKEIIEGCIRQNKDERYSIKDLLNHAFF 286
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 8e-27
Identities = 76/404 (18%), Positives = 135/404 (33%), Gaps = 99/404 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
RY + +G G + V ++D +K VA+K + D + EI +L +
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN--- 110
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNG-THICMVFEVMGYNLLRLIARSDY-KGIHIQ 143
H + V+++L+ + +V E+ + +L Y +HI+
Sbjct: 111 --H---------DHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK 159
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
T++ +L G+ Y+H+ I+H D+KP N L+ + K+
Sbjct: 160 ---TLLYNLLVGVKYVHS-AGILHRDLKPANCLV------------NQDCSVKVC----- 198
Query: 204 SLDSTMSDFSL-----------LDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRS 252
DF L + + + + + + TR YR+
Sbjct: 199 -------DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRA 251
Query: 253 VEVLIGA-GYGPAADIWSTACMAFELATGDY-----------LF--------------DP 286
E+++ Y A D+WS C+ EL LF
Sbjct: 252 PELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGN 311
Query: 287 KAGKEYSRDDDHLAHIVELVGPIPKEVLS--QGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344
+ D L I ++G +E + + + RY D
Sbjct: 312 DFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD---------- 361
Query: 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388
L E++ S A+A L ML N R + +CL HP+
Sbjct: 362 LAERFPASSADA---IHLLKRMLVFNPNKRITINECLAHPFFKE 402
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 8e-27
Identities = 56/378 (14%), Positives = 103/378 (27%), Gaps = 122/378 (32%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKA----- 80
F + I +G G F V+ + D +K VK + + A E+ L
Sbjct: 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVN 65
Query: 81 -VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLIARS 135
V Y+ + S K ++ I M + L + I +
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLF------I-----QMEFCDKGTLEQWIEKR 114
Query: 136 DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195
+ + + +Q+ +G++Y+H++ ++I+ D+KP NI
Sbjct: 115 RGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIF------------------- 154
Query: 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSV 253
L T VKI D G + D T +Y S
Sbjct: 155 ---------LVDTK---------------QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSP 190
Query: 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
E + YG D+++ + EL + + G I
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELLHV--------CDTAFETSKFFTDLRD--GIISD-- 238
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
+ K L +L +
Sbjct: 239 ------------------------------------IFDK----KEKTLLQKLLSKKPED 258
Query: 374 RASAADCLRHPWLNPRRS 391
R + ++ LR + +
Sbjct: 259 RPNTSEILRTLTVWKKSP 276
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 4e-26
Identities = 83/385 (21%), Positives = 135/385 (35%), Gaps = 117/385 (30%)
Query: 10 MEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYA 68
++ PG + + G L Y ++KLG G + V L D A+KI+ K+ +
Sbjct: 20 LQATPGMFITSKKGHLSEM-YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS 78
Query: 69 DTA--RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMG 125
+ +E+ +LK + H + +++L + F+ + + +V E G
Sbjct: 79 SNSKLLEEVAVLKLLD-----HPN---------IMKLYDFFE----DKRNYYLVMECYKG 120
Query: 126 YNLL-RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
L +I R + + IIKQVL G+ YLH I+H D+KPEN+L
Sbjct: 121 GELFDEIIHRMKFN---EVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLL-------- 168
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFA 242
L+S D + KI D G + ++
Sbjct: 169 --------------------LESKEKDALI------------KIVDFGLSAVFENQKKMK 196
Query: 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHI 302
+ + T Y + EVL Y D+WS + F L G F + +E
Sbjct: 197 ERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQE----------- 244
Query: 303 VELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-D 361
I ++V + F W S+ A D
Sbjct: 245 ------ILRKVEKG----------KYTFDS----PEW--------------KNVSEGAKD 270
Query: 362 FLLPMLHVNQKLRASAADCLRHPWL 386
+ ML + + R SA L HPW+
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWI 295
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-25
Identities = 66/371 (17%), Positives = 108/371 (29%), Gaps = 122/371 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDEIVLLKAVGRK 84
+ + +K+G G FS V+ + L D VALK V+ D EI LLK +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL--- 89
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHI- 142
VI+ F + +V E +L R+I + I
Sbjct: 90 -----------NHPNVIKYYASFI----EDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 143 -QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ V Q+ L ++H++ R++H DIKP N+ + T
Sbjct: 135 ERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFI--------------TATGV----- 174
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ----YRSVEVLI 257
VK+ DLG + + Y S E +
Sbjct: 175 ------------------------VKLGDLGLGRFFSSK-TTAAHSLVGTPYYMSPERIH 209
Query: 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAH-IVE-LVGPIPKEVLS 315
GY +DIWS C+ +E+A F YS L I + P+P + S
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-----LCKKIEQCDYPPLPSDHYS 264
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
+ + + ++ + + R
Sbjct: 265 E-----------------------------------------ELRQLVNMCINPDPEKRP 283
Query: 376 SAADCLRHPWL 386
Sbjct: 284 DVTYVYDVAKR 294
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 80/386 (20%), Positives = 130/386 (33%), Gaps = 118/386 (30%)
Query: 10 MEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQ 65
+ PG + + Y R LG G F V L D A+K++ +
Sbjct: 9 LHATPGMFVQHSTAIFSDR-YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 67
Query: 66 VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VM 124
++ E+ LLK + H + +++L F+ + + +V E
Sbjct: 68 TDKESLLREVQLLKQLD-----HPN---------IMKLYEFFE----DKGYFYLVGEVYT 109
Query: 125 GYNLL-RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
G L +I+R + + II+QVL G+ Y+H +I+H D+KPEN+L
Sbjct: 110 GGELFDEIISRKRFS---EVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLL------- 158
Query: 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHF 241
L+S D ++ +I D G +
Sbjct: 159 ---------------------LESKSKDANI------------RIIDFGLSTHFEASKKM 185
Query: 242 ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAH 301
D+I T Y + EVL G Y D+WST + + L +G F+
Sbjct: 186 KDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGA-------------- 230
Query: 302 IVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA- 360
++++ K E W K S+ A
Sbjct: 231 -----------------------NEYDILKKVEKGKYT------FELPQWKK--VSESAK 259
Query: 361 DFLLPMLHVNQKLRASAADCLRHPWL 386
D + ML +R SA D L H W+
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWI 285
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 7e-25
Identities = 77/380 (20%), Positives = 122/380 (32%), Gaps = 122/380 (32%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD------EIVLL 78
LF Y + +G G FS V + + A+KIV + + E +
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIARSD 136
+ H ++ LL + + + MVFE M G +L ++ R+D
Sbjct: 81 HMLK-----H---------PHIVELLETYS----SDGMLYMVFEFMDGADLCFEIVKRAD 122
Query: 137 YKGIHIQNV-RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195
++ + V ++Q+LE L Y H IIH D+KP +L
Sbjct: 123 AGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVL------------------- 162
Query: 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRS 252
L N VK+ G A + + + T + +
Sbjct: 163 ------------------LASKEN---SAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312
EV+ YG D+W + F L L G +P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFIL---------------------------LSGCLP-- 232
Query: 313 VLSQGKKTLRYF--TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHV 369
F T + F I G Y++ WS S+ A D + ML +
Sbjct: 233 -----------FYGTKERLFEGIIK----GKYKMNPR--QWSH--ISESAKDLVRRMLML 273
Query: 370 NQKLRASAADCLRHPWLNPR 389
+ R + + L HPWL R
Sbjct: 274 DPAERITVYEALNHPWLKER 293
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 8e-25
Identities = 77/380 (20%), Positives = 125/380 (32%), Gaps = 127/380 (33%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-------------- 71
Y +RKLG G + V L + + A+K++K Q
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 72 RDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL- 129
+EI LLK++ H + +I+L + F+ + + +V E G L
Sbjct: 94 YNEISLLKSLD-----HPN---------IIKLFDVFE----DKKYFYLVTEFYEGGELFE 135
Query: 130 RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189
++I R + + I+KQ+L G+ YLH I+H DIKPENIL
Sbjct: 136 QIINRHKFD---ECDAANIMKQILSGICYLHKH-NIVHRDIKPENIL------------- 178
Query: 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQT 247
L++ S ++ KI D G + + D D + T
Sbjct: 179 ---------------LENKNSLLNI------------KIVDFGLSSFFSKDYKLRDRLGT 211
Query: 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307
Y + EVL Y D+WS + + L G F +
Sbjct: 212 AYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ-------------------- 250
Query: 308 PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPM 366
Q ++++ K W SD A + + M
Sbjct: 251 -----------------NDQDIIKKVEKGKY-----YFDFND-WKN--ISDEAKELIKLM 285
Query: 367 LHVNQKLRASAADCLRHPWL 386
L + R +A + L W+
Sbjct: 286 LTYDYNKRCTAEEALNSRWI 305
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 8e-25
Identities = 58/371 (15%), Positives = 107/371 (28%), Gaps = 124/371 (33%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ ++G G VW + +A+K ++ + D V+LK+
Sbjct: 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH----- 81
Query: 87 VHSSAYNTQASEKVIR----LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+++ + + ++ I M E+MG +L R I
Sbjct: 82 ---------DCPYIVQCFGTFITNTDVF------IAM--ELMGTCAEKLKKRMQ-GPIPE 123
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ + + +++ L YL + +IH D+KP NIL+
Sbjct: 124 RILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ-------------------- 163
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA--DEIQTRQYRSVEVL---- 256
+K+ D G + + D A Y + E +
Sbjct: 164 -----------------------IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPD 200
Query: 257 -IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
Y AD+WS ELATG + + D + L +++ P
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKN-----CKTDFEVLTKVLQ--EEPPL---- 249
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
L +S DF F+ L + + R
Sbjct: 250 -----------------------------LPGHMGFSG----DFQSFVKDCLTKDHRKRP 276
Query: 376 SAADCLRHPWL 386
L H ++
Sbjct: 277 KYNKLLEHSFI 287
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 8e-25
Identities = 49/284 (17%), Positives = 91/284 (32%), Gaps = 68/284 (23%)
Query: 25 LFNFRYHVIRKLGWGHFSTVWL-----SWDLQDKTFVALKIVKSDQVY-ADTARDEIVLL 78
L + +V LG G F+ V+ D ++K LK+ K + + L
Sbjct: 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERL 121
Query: 79 KAVGRKSNVH-SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLIA 133
K + + SA+ Q +V E+ Y N + L
Sbjct: 122 KPSMQHMFMKFYSAHLFQ-------------------NGSVLVGELYSYGTLLNAINLYK 162
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ K + V + ++L + +H C IIH DIKP+N ++ + +
Sbjct: 163 NTPEKVMPQGLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILGNGFLE---------- 211
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI-----DDHFADEIQTR 248
+ + + DLG + + F + +T
Sbjct: 212 ----------------------QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETS 249
Query: 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
++ VE+L + D + A + + G Y+ G E
Sbjct: 250 GFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 74/367 (20%), Positives = 112/367 (30%), Gaps = 87/367 (23%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGRKSN 86
+ + +LG G F V VA+K + + + R EI ++K +
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN---- 70
Query: 87 VHSSAYNTQASEKVIRLLN--DFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIHI 142
H V+ D + E G +L L + G+
Sbjct: 71 -H---------PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+RT++ + L YLH + RIIH D+KPENI
Sbjct: 121 GPIRTLLSDISSALRYLH-ENRIIHRDLKPENI--------------------------- 152
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI-DDHFADEIQ-TRQYRSVEVLIGAG 260
+L P + + KI DLG A + E T QY + E+L
Sbjct: 153 -----------VLQPGPQ--RLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKK 199
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y D WS +AFE TG + P P + V GK
Sbjct: 200 YTVTVDYWSFGTLAFECITG-FR--P-------------------FLPNWQPVQWHGKVR 237
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+ + + + VL H S A +L ML +Q+ R +
Sbjct: 238 EKSNEHIVVYDDLTGAVKFSS--VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295
Query: 381 LRHPWLN 387
Sbjct: 296 PNVGCFQ 302
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 84/369 (22%), Positives = 127/369 (34%), Gaps = 116/369 (31%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTA--RDEIVLLKAVG 82
F RY+++ LG G F V D + A+K++ K+ DT+ E+ LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGI 140
H + +++L + + + +V E G L +I R +
Sbjct: 80 -----HPN---------IMKLFEILE----DSSSFYIVGELYTGGELFDEIIKRKRFS-- 119
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ IIKQV G+ Y+H I+H D+KPENIL
Sbjct: 120 -EHDAARIIKQVFSGITYMHKH-NIVHRDLKPENIL------------------------ 153
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIG 258
L+S D + KI D G + + D I T Y + EVL G
Sbjct: 154 ----LESKEKDCDI------------KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y D+WS + + L +G F K
Sbjct: 198 T-YDEKCDVWSAGVILYILLSGTPPFYGK------------------------------- 225
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASA 377
+R++ G Y + W SD A D + ML + LR +A
Sbjct: 226 ------NEYDILKRVET----GKYA--FDLPQWRT--ISDDAKDLIRKMLTFHPSLRITA 271
Query: 378 ADCLRHPWL 386
CL HPW+
Sbjct: 272 TQCLEHPWI 280
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-23
Identities = 78/380 (20%), Positives = 127/380 (33%), Gaps = 126/380 (33%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---------SDQVYADTARDEIV 76
Y + + LG G V L+++ + VA++I+ + A EI
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 77 LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIAR 134
+LK + H +I++ N F + +V E+M G L +++
Sbjct: 193 ILKKLN-----HPC---------IIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGN 233
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
K + Q+L + YLH IIH D+KPEN+L+ +
Sbjct: 234 KRLKE---ATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEE------------ 277
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRS 252
D +KI D G++ + + T Y +
Sbjct: 278 ----------------------------DCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309
Query: 253 VEVLIG---AGYGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGP 308
EVL+ AGY A D WS + F +G Y F +
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YPPFS---------EHR----------- 348
Query: 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPML 367
T +I + G Y + E W++ S+ A D + +L
Sbjct: 349 ----------------TQVSLKDQITS----GKYNFIPE--VWAE--VSEKALDLVKKLL 384
Query: 368 HVNQKLRASAADCLRHPWLN 387
V+ K R + + LRHPWL
Sbjct: 385 VVDPKARFTTEEALRHPWLQ 404
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 3e-23
Identities = 78/370 (21%), Positives = 127/370 (34%), Gaps = 111/370 (30%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F Y V +G G +S A+KI+ + +EI +L G+
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHP 76
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIARSDYKGIHIQ 143
N +I L + + +G ++ +V E+M G LL +++ + + +
Sbjct: 77 N-------------IITLKDVYD----DGKYVYVVTELMKGGELLDKILRQKFFSE---R 116
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ + + + YLH Q ++H D+KP NIL
Sbjct: 117 EASAVLFTITKTVEYLHAQ-GVVHRDLKPSNIL--------------------------- 148
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG 260
+ + +I D G A + T + + EVL G
Sbjct: 149 -YVDESGNPESI-----------RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y A DIWS + + + TG F + DD
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPF-------ANGPDD----------------------- 226
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAAD 379
TP+ RI + G + L+ Y W+ SD A D + MLHV+ R +AA
Sbjct: 227 ----TPEEILARIGS----GKFS-LSGGY-WNS--VSDTAKDLVSKMLHVDPHQRLTAAL 274
Query: 380 CLRHPWLNPR 389
LRHPW+
Sbjct: 275 VLRHPWIVHW 284
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 8e-23
Identities = 72/417 (17%), Positives = 118/417 (28%), Gaps = 160/417 (38%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD------EIVLLK 79
+YH+ +G G + V ++ + Q + A+KI+ +++ +D E+ L+K
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIARSDY 137
+ + RL ++ + +IC+V E+ G +LL +L D
Sbjct: 84 KL--------------HHPNIARLYEVYE----DEQYICLVMELCHGGHLLDKLNVFIDD 125
Query: 138 KGIHIQN-------------------------------------VRTIIKQVLEGLNYLH 160
+ I++Q+ L+YLH
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185
Query: 161 TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANE 220
Q I H DIKPEN L +
Sbjct: 186 NQ-GICHRDIKPENFLFSTNKSF------------------------------------- 207
Query: 221 VYDISVKIADLGNACWIDDHFADEIQ-------TRQYRSVEVLIGAG--YGPAADIWSTA 271
+K+ D G + E T + + EVL YGP D WS
Sbjct: 208 ----EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 272 CMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331
+ L G F +D V
Sbjct: 264 VLLHLLLMGAVPF-------PGVNDADTISQVL----------------------NKKL- 293
Query: 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADCLRHPWLN 387
+N + S A D L +L+ N R A L+HPW++
Sbjct: 294 CFEN-PNY--------------NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 1e-22
Identities = 81/380 (21%), Positives = 127/380 (33%), Gaps = 126/380 (33%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---------SDQVYADTARDEIV 76
Y + + LG G V L+++ + VA+KI+ + A EI
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 77 LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIAR 134
+LK + H +I++ N F + +V E+M G L +++
Sbjct: 68 ILKKLN-----HPC---------IIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGN 108
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
K + Q+L + YLH IIH D+KPEN+L+ +
Sbjct: 109 KRLKE---ATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEE------------ 152
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRS 252
D +KI D G++ + + T Y +
Sbjct: 153 ----------------------------DCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 253 VEVLIG---AGYGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGP 308
EVL+ AGY A D WS + F +G Y F +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YPPF----------SEHR---------- 223
Query: 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPML 367
T +I + G Y + E W AE S+ A D + +L
Sbjct: 224 ----------------TQVSLKDQITS----GKYNFIPE--VW--AEVSEKALDLVKKLL 259
Query: 368 HVNQKLRASAADCLRHPWLN 387
V+ K R + + LRHPWL
Sbjct: 260 VVDPKARFTTEEALRHPWLQ 279
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 2e-22
Identities = 77/366 (21%), Positives = 123/366 (33%), Gaps = 112/366 (30%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGRK 84
+ + LG G FS V+L ALK + KS + +EI +LK +
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK-- 64
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIHI 142
H E ++ L + ++ + TH +V + V G L R++ R Y
Sbjct: 65 ---H---------ENIVTLEDIYE----STTHYYLVMQLVSGGELFDRILERGVYTE--- 105
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++ +I+QVL + YLH I+H D+KPEN+L
Sbjct: 106 KDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLY------------------------- 139
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261
T + + + I D G + + + T Y + EVL Y
Sbjct: 140 ----LTPEE-----------NSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
A D WS + + L G F Y + L
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPF-------YEETESKL---------------------- 215
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAADC 380
F +I G Y+ + W + S+ A DF+ +L + R +
Sbjct: 216 --------FEKIKE----GYYEFESP--FWD--DISESAKDFICHLLEKDPNERYTCEKA 259
Query: 381 LRHPWL 386
L HPW+
Sbjct: 260 LSHPWI 265
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 3e-22
Identities = 66/372 (17%), Positives = 117/372 (31%), Gaps = 125/372 (33%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
I +LG G + V + +A+K +++ Q D + ++ V
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV----- 63
Query: 87 VHSSAYNTQASEKVIR----LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ L + ++ ICM E+M +L + + KG I
Sbjct: 64 ---------DCPFTVTFYGALFREGDVW------ICM--ELMDTSLDKFYKQVIDKGQTI 106
Query: 143 --QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ I +++ L +LH++ +IH D+KP N+L+
Sbjct: 107 PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ------------------ 148
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE--IQTRQYRSVEVLIG 258
VK+ D G + ++ D A + + Y + E +
Sbjct: 149 -------------------------VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 259 ----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
GY +DIWS ELA + +D + L +VE P P+ L
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYD-----SWGTPFQQLKQVVE--EPSPQ--L 234
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
K +S +F DF L N K R
Sbjct: 235 PADK--------------------------------FSA----EFVDFTSQCLKKNSKER 258
Query: 375 ASAADCLRHPWL 386
+ + ++HP+
Sbjct: 259 PTYPELMQHPFF 270
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 4e-22
Identities = 63/381 (16%), Positives = 114/381 (29%), Gaps = 114/381 (29%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLL 78
V++G R V R L G F+ V+ + D+ ALK + +++ E+ +
Sbjct: 23 VELG---ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFM 79
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY---SRNGTHICMVFEVMGY---NLLRLI 132
K + N +++ + I S G ++ + L+ +
Sbjct: 80 KKLSGHPN-------------IVQFCSAASIGKEESDTGQAEFLL--LTELCKGQLVEFL 124
Query: 133 ARSDYKG-IHIQNVRTIIKQVLEGLNYLHTQ-CRIIHTDIKPENILMCVDYDKVRRMARD 190
+ + +G + V I Q + ++H Q IIH D+K EN+L+
Sbjct: 125 KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL------------S 172
Query: 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ---T 247
K+ DF + D S +EI T
Sbjct: 173 NQGTIKLC------------DFGSATTISHYPDYSWSAQRRALV-------EEEITRNTT 213
Query: 248 RQYRS---VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
YR+ +++ G DIW+ C+ + L + F +D IV
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----------EDGAKLRIV- 262
Query: 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLL 364
G + + + F +
Sbjct: 263 ----------------------NGKYSIPPHDTQ-----------------YTVFHSLIR 283
Query: 365 PMLHVNQKLRASAADCLRHPW 385
ML VN + R S A+ +
Sbjct: 284 AMLQVNPEERLSIAEVVHQLQ 304
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 95.8 bits (238), Expect = 4e-22
Identities = 47/388 (12%), Positives = 91/388 (23%), Gaps = 112/388 (28%)
Query: 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA----RDEIVLLKAVGR 83
LG + D + + + + A ++E++ L+ +
Sbjct: 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 132
Query: 84 KSNVHSSAYN-----------TQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLR-- 130
N + + +K+IR+ D + ++ M NL
Sbjct: 133 IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWV--LSRFFLYPRMQSNLQTFG 190
Query: 131 --LIARSDYKGIHIQNVR-TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187
L++ S + + R + QV+ L LH ++HT ++P +I++
Sbjct: 191 EVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH-HYGLVHTYLRPVDIVL---------- 239
Query: 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-IQ 246
D + F L SV E
Sbjct: 240 --DQRGGVFLT------------GFEHLVRDGARVVSSVSRG----------FEPPELEA 275
Query: 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV 306
R S + D W+ + + + D D E +
Sbjct: 276 RRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI----------TKDAALGGSEWI 325
Query: 307 GPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLP 365
FR N+ L
Sbjct: 326 -----------------------FRSCKNI--------------------PQPVRALLEG 342
Query: 366 MLHVNQKLRASAADCLRHPWLNPRRSHY 393
L ++ R + P R+
Sbjct: 343 FLRYPKEDRLLPLQAMETPEYEQLRTEL 370
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 5e-22
Identities = 62/373 (16%), Positives = 120/373 (32%), Gaps = 123/373 (32%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSN 86
+ ++G G + +V +A+K ++S + D V++++
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS----- 78
Query: 87 VHSSAYNTQASEKVIR----LLNDFKIYSRNGTHICMVFEVMG---YNLLRLIARSDYKG 139
+++ L + + ICM E+M + +
Sbjct: 79 ---------DCPYIVQFYGALFREGDCW------ICM--ELMSTSFDKFYKYVYSVLDDV 121
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I + + I ++ LN+L +IIH DIKP NIL+ +
Sbjct: 122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN----------------- 164
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD--EIQTRQYRSVEVL- 256
+K+ D G + + D A + R Y + E +
Sbjct: 165 --------------------------IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 198
Query: 257 ---IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
GY +D+WS +ELATG + + ++ D L +V+ G P+
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPK-----WNSVFDQLTQVVK--GDPPQ-- 249
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
L +E+ +S F +F+ L ++
Sbjct: 250 ----------------------LSN-------SEEREFSP----SFINFVNLCLTKDESK 276
Query: 374 RASAADCLRHPWL 386
R + L+HP++
Sbjct: 277 RPKYKELLKHPFI 289
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 8e-22
Identities = 60/372 (16%), Positives = 112/372 (30%), Gaps = 108/372 (29%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV 81
++ + LG G FS + A+KI+ + EI LK
Sbjct: 6 FYQHYDL-DLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME--ANTQKEITALKLC 62
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIARSDYKG 139
N+ ++L F + H +V E++ G L R+ + +
Sbjct: 63 EGHPNI-------------VKLHEVFH----DQLHTFLVMELLNGGELFERIKKKKHFSE 105
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
I+++++ ++++H ++H D+KPEN+L
Sbjct: 106 ---TEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLF---------------------- 139
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256
+E ++ +KI D G A T Y + E+L
Sbjct: 140 ------------------TDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL 181
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
GY + D+WS + + + +G F S D
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPF-------QSHDRSLTCT--------------- 219
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRA 375
+ ++I G + + W S A D + +L V+ R
Sbjct: 220 --------SAVEIMKKIKK----GDFS-FEGEA-WKN--VSQEAKDLIQGLLTVDPNKRL 263
Query: 376 SAADCLRHPWLN 387
+ + WL
Sbjct: 264 KMSGLRYNEWLQ 275
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 2e-21
Identities = 77/373 (20%), Positives = 122/373 (32%), Gaps = 117/373 (31%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---DTARDEIVLLKAVG 82
F+ Y V +LG G FS V A KI+ + ++ A E + + +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGI 140
H + ++RL + + + +VF+ V G L ++AR Y
Sbjct: 64 -----HPN---------IVRLHDSI----QEESFHYLVFDLVTGGELFEDIVAREFYSE- 104
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ I+Q+LE + Y H+ I+H ++KPEN+L
Sbjct: 105 --ADASHCIQQILESIAYCHSN-GIVHRNLKPENLL------------------------ 137
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIG 258
L A +VK+AD G A ++D + T Y S EVL
Sbjct: 138 -------------LASKAK---GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y DIW+ + + L G + P +
Sbjct: 182 DPYSKPVDIWACGVILYILLVG---YPPFWDE---------------------------- 210
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKLRAS 376
+ +I G Y + W EA D + L VN K R +
Sbjct: 211 ------DQHRLYAQIKA----GAYDYPSP--EWDTVTPEAKSLIDSM---LTVNPKKRIT 255
Query: 377 AADCLRHPWLNPR 389
A L+ PW+ R
Sbjct: 256 ADQALKVPWICNR 268
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 2e-21
Identities = 77/386 (19%), Positives = 121/386 (31%), Gaps = 136/386 (35%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----------EI 75
F Y LG G S V A+KI+ + +A + E+
Sbjct: 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 76 VLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIA 133
+L+ V N +I+L + ++ T +VF++M L L
Sbjct: 75 DILRKVSGHPN-------------IIQLKDTYE----TNTFFFLVFDLMKKGELFDYLTE 117
Query: 134 RSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193
+ + R I++ +LE + LH I+H D+KPENIL
Sbjct: 118 KVTLSE---KETRKIMRALLEVICALHKL-NIVHRDLKPENIL----------------- 156
Query: 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYR 251
LD D+++K+ D G +C +D + T Y
Sbjct: 157 -----------LDD---------------DMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 190
Query: 252 SVEVLIGA------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL 305
+ E++ + GYG D+WST + + L L
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTL---------------------------L 223
Query: 306 VGPIPKEVLSQGKKTLRYF---TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-D 361
G P F R I + G YQ W SD D
Sbjct: 224 AGSPP-------------FWHRKQMLMLRMIMS----GNYQ-FGSPE-WDD--YSDTVKD 262
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
+ L V + R +A + L HP+
Sbjct: 263 LVSRFLVVQPQKRYTAEEALAHPFFQ 288
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 4e-21
Identities = 51/255 (20%), Positives = 85/255 (33%), Gaps = 76/255 (29%)
Query: 35 KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNT 94
++G G F V D Q A+K V+ + +E+V +
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLE----VFRVEELVACAGL------------- 107
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVL 153
+S +++ L R G + + E + G +L +LI + + + Q L
Sbjct: 108 -SSPRIVPLYGAV----REGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQAL 160
Query: 154 EGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFS 213
EGL YLHT+ RI+H D+K +N+L + D R
Sbjct: 161 EGLEYLHTR-RILHGDVKADNVL--LSSDGSR---------------------------- 189
Query: 214 LLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV--------EVLIGAGYGPAA 265
+ D G+A + + EV++G
Sbjct: 190 ------------AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 237
Query: 266 DIWSTACMAFELATG 280
DIWS+ CM + G
Sbjct: 238 DIWSSCCMMLHMLNG 252
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 4e-21
Identities = 72/368 (19%), Positives = 113/368 (30%), Gaps = 116/368 (31%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA-DTARDEIVLLKAVGRK 84
N Y + +G G + V ++ + A K + V D + EI ++K++
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-- 64
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIHI 142
H + +IRL F+ + T I +V E G L R++ + ++
Sbjct: 65 ---HPN---------IIRLYETFE----DNTDIYLVMELCTGGELFERVVHKRVFRE--- 105
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ I+K VL + Y H + H D+KPEN L
Sbjct: 106 SDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFL-------------------------- 138
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAG 260
+ D L K+ D G A ++ T Y S +VL G
Sbjct: 139 --FLTDSPDSPL------------KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-L 183
Query: 261 YGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
YGP D WS M + L G Y F
Sbjct: 184 YGPECDEWSAGVMMYVLLCG-YPPFSAP-------------------------------- 210
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAA 378
T +I G + + W S A + +L + K R ++
Sbjct: 211 -----TDSEVMLKIRE----GTFTFPEK--DWLN--VSPQAESLIRRLLTKSPKQRITSL 257
Query: 379 DCLRHPWL 386
L H W
Sbjct: 258 QALEHEWF 265
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 91.9 bits (228), Expect = 1e-20
Identities = 66/385 (17%), Positives = 111/385 (28%), Gaps = 102/385 (26%)
Query: 30 YHVIRKLGWGH--FSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRK 84
Y ++ +G G TV L+ +V ++ + + + E+ + K
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF--- 83
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQ 143
++ F + +V M Y + LI G++
Sbjct: 84 -----------NHPNIVPYRATFI----ADNELWVVTSFMAYGSAKDLICTHFMDGMNEL 128
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ I++ VL+ L+Y+H +H +K +IL+ VD G
Sbjct: 129 AIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVD-----------------G----- 165
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE--IQTRQYRSV-------- 253
V ++ L + + H + + SV
Sbjct: 166 ---------------------KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 204
Query: 254 EVL--IGAGYGPAADIWSTACMAFELATG-----DY-----LFDPKAGKEYSRDDDHLAH 301
EVL GY +DI+S A ELA G D L + G D
Sbjct: 205 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 264
Query: 302 IVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
EL + V + G + P +S F
Sbjct: 265 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHP--------YHRTFSPH----FHH 312
Query: 362 FLLPMLHVNQKLRASAADCLRHPWL 386
F+ L N R SA+ L H +
Sbjct: 313 FVEQCLQRNPDARPSASTLLNHSFF 337
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 1e-20
Identities = 61/374 (16%), Positives = 113/374 (30%), Gaps = 115/374 (30%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGRK 84
Y + +LG G F V + A K V + +T R EI + +
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-- 212
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIHI 142
H ++ L + F+ + + M++E + G L ++ + +
Sbjct: 213 ---H---------PTLVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNK--MSE 254
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++QV +GL ++H +H D+KPENI+
Sbjct: 255 DEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIM-------------------------- 287
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAG 260
+ S+ +K+ D G +D T ++ + EV G
Sbjct: 288 --FTTKRSN-------------ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
G D+WS +++ L +G P G+
Sbjct: 333 VGYYTDMWSVGVLSYILLSG---LSPFGGE------------------------------ 359
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKLRASAA 378
R + + + + +S + DF +L + R +
Sbjct: 360 ----NDDETLRNVKS----CDWNMDDS--AFSGISEDGKDFIR---KLLLADPNTRMTIH 406
Query: 379 DCLRHPWLNPRRSH 392
L HPWL P +
Sbjct: 407 QALEHPWLTPGNAP 420
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 2e-20
Identities = 70/384 (18%), Positives = 126/384 (32%), Gaps = 135/384 (35%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---------SDQVYADTARDEIV 76
F +Y +G G S V A+KI++ + + R E
Sbjct: 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151
Query: 77 LLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIAR 134
+L+ V + +I L++ ++ + + + +VF++M L L +
Sbjct: 152 ILRQVAGHPH-------------IITLIDSYE----SSSFMFLVFDLMRKGELFDYLTEK 194
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
+ R+I++ +LE +++LH I+H D+KPENIL
Sbjct: 195 VALSE---KETRSIMRSLLEAVSFLHAN-NIVHRDLKPENIL------------------ 232
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRS 252
LD ++ ++++D G +C ++ + T Y +
Sbjct: 233 ----------LDD---------------NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267
Query: 253 VEVLIGA------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV 306
E+L + GYG D+W+ + F L L
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTL---------------------------LA 300
Query: 307 GPIPKEVLSQGKKTLRYF---TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DF 362
G P F R I G YQ + W S D
Sbjct: 301 GSPP-------------FWHRRQILMLRMIME----GQYQ-FSSPE-WDD--RSSTVKDL 339
Query: 363 LLPMLHVNQKLRASAADCLRHPWL 386
+ +L V+ + R +A L+HP+
Sbjct: 340 ISRLLQVDPEARLTAEQALQHPFF 363
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-20
Identities = 80/376 (21%), Positives = 123/376 (32%), Gaps = 123/376 (32%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---DTARDEIVLLKAVG 82
F+ Y V +LG G FS V A KI+ + ++ A E + + +
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGI 140
H + ++RL + + + +VF+ V G L ++AR Y
Sbjct: 87 -----HPN---------IVRLHDSIQ----EESFHYLVFDLVTGGELFEDIVAREFYSE- 127
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ I+Q+LE + Y H+ I+H ++KPEN+L
Sbjct: 128 --ADASHCIQQILESIAYCHSN-GIVHRNLKPENLL------------------------ 160
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIG 258
L A +VK+AD G A ++D + T Y S EVL
Sbjct: 161 -------------LASKAK---GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 204
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y DIW+ + + L LVG P
Sbjct: 205 DPYSKPVDIWACGVILYIL---------------------------LVGYPP-------- 229
Query: 319 KTLRYF---TPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKL 373
F + +I G Y + W EA D + L VN K
Sbjct: 230 -----FWDEDQHRLYAQIKA----GAYDYPSP--EWDTVTPEAKSLIDSM---LTVNPKK 275
Query: 374 RASAADCLRHPWLNPR 389
R +A L+ PW+ R
Sbjct: 276 RITADQALKVPWICNR 291
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-20
Identities = 50/258 (19%), Positives = 89/258 (34%), Gaps = 45/258 (17%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSN 86
+ I+ LG G F V+ + + D A+K ++ + ++ + E+ L +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLRLI-ARSDYKGIH 141
V Y E + + + ++ M NL + R +
Sbjct: 66 VR---YFNAWLE------KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
I Q+ E + +LH++ ++H D+KP NI +D D V K+G
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMD-DVV-----------KVG--- 160
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261
DF L D + + ++ T+ Y S E + G Y
Sbjct: 161 ---------DFGL----VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY 207
Query: 262 GPAADIWSTACMAFELAT 279
DI+S + FEL
Sbjct: 208 SHKVDIFSLGLILFELLY 225
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 3e-20
Identities = 81/380 (21%), Positives = 126/380 (33%), Gaps = 120/380 (31%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-------SDQVYADTARDEIVLL 78
Y + +LG G F+ V + A K +K V + E+ +L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSD 136
+ V VI L + ++ N T + ++ E V G L L +
Sbjct: 70 RQV--------------LHHNVITLHDVYE----NRTDVVLILELVSGGELFDFLAQKES 111
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
+ + IKQ+L+G+NYLHT+ +I H D+KPENI+
Sbjct: 112 LSE---EEATSFIKQILDGVNYLHTK-KIAHFDLKPENIM-------------------- 147
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVE 254
LLD + I K+ D G A I+D F + T ++ + E
Sbjct: 148 -----------------LLDKNIPIPHI--KLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
++ G AD+WS + + L +G P G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG---ASPFLGD------------------------ 221
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQK 372
T Q I + Y E +S A DF L L +
Sbjct: 222 ----------TKQETLANITS----VSYDFDEE--FFSHTSELAKDFIRKL---LVKETR 262
Query: 373 LRASAADCLRHPWLNPRRSH 392
R + + LRHPW+ P +
Sbjct: 263 KRLTIQEALRHPWITPVDNQ 282
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 1e-19
Identities = 68/363 (18%), Positives = 116/363 (31%), Gaps = 118/363 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRK 84
+ + R LG G F V+L+ + Q K +ALK++ Q+ R E+ + + R
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 68
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ 143
N ++RL F + T + ++ E + R + + Q
Sbjct: 69 PN-------------ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKL--SKFDEQ 109
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
T I ++ L+Y H++ R+IH DIKPEN+L
Sbjct: 110 RTATYITELANALSYCHSK-RVIHRDIKPENLL--------------------------- 141
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYG 262
L S +KIAD G + ++ T Y E++ G +
Sbjct: 142 -LGSAG---------------ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
D+WS + +E G F+
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEAN----------------------------------- 210
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
T Q ++RI + ++ + D + +L N R + L
Sbjct: 211 --TYQETYKRISRV-----------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
Query: 383 HPW 385
HPW
Sbjct: 258 HPW 260
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 2e-19
Identities = 79/380 (20%), Positives = 124/380 (32%), Gaps = 120/380 (31%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-------RDEIVLL 78
+ Y +LG G F+ V + A K +K + + E+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSD 136
K + H VI L ++ N T + ++ E V G L L +
Sbjct: 69 KEIQ-----H---------PNVITLHEVYE----NKTDVILILELVAGGELFDFLAEKES 110
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
+ +KQ+L G+ YLH+ +I H D+KPENI+
Sbjct: 111 LTE---EEATEFLKQILNGVYYLHSL-QIAHFDLKPENIM-------------------- 146
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVE 254
LLD +KI D G A ID F + T ++ + E
Sbjct: 147 -----------------LLDRNVP--KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
++ G AD+WS + + L +G P G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG---ASPFLGD------------------------ 220
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQK 372
T Q + Y+ E ++S A A DF L L + K
Sbjct: 221 ----------TKQETLANVSA----VNYEFEDE--YFSNTSALAKDFIRRL---LVKDPK 261
Query: 373 LRASAADCLRHPWLNPRRSH 392
R + D L+HPW+ P+ +
Sbjct: 262 KRMTIQDSLQHPWIKPKDTQ 281
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 2e-19
Identities = 70/373 (18%), Positives = 119/373 (31%), Gaps = 135/373 (36%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNV 87
K+G G V L+ + VA+K++ Q + +E+V+++
Sbjct: 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMR-------- 97
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVR 146
V+ + + + G + ++ E + G L ++++ I
Sbjct: 98 ------DYQHFNVVEMYKSYLV----GEELWVLMEFLQGGALTDIVSQVRLNEEQIA--- 144
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
T+ + VL+ L YLH Q +IH DIK ++IL+ +D
Sbjct: 145 TVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDGR------------------------ 179
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSV----------EV 255
VK++D G F +I + R EV
Sbjct: 180 -------------------VKLSDFG--------FCAQISKDVPKRKSLVGTPYWMAPEV 212
Query: 256 LIGAGYGPAADIWSTACMAFELATGD--YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
+ + Y DIWS M E+ G+ Y D P +
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEPPYF------------SDS-----------PVQA 249
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
+ R D+ P L + S DFL ML + +
Sbjct: 250 M---------------KRLRDSPPP-----KLKNSHKVSP----VLRDFLERMLVRDPQE 285
Query: 374 RASAADCLRHPWL 386
RA+A + L HP+L
Sbjct: 286 RATAQELLDHPFL 298
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 88.2 bits (218), Expect = 2e-19
Identities = 37/343 (10%), Positives = 77/343 (22%), Gaps = 86/343 (25%)
Query: 3 FDQQESYMEYRPGGYCPVQIGDLFNFRYHVI---RKLGWGHFSTVWLSWDLQDKTFVALK 59
D S + G P ++ R + LG + D + +
Sbjct: 52 ADSLVSTSLWNTGQ--PFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVH 109
Query: 60 IVKSDQVYADTA----RDEIVLLKAVGRKSNVHS--SAYNTQASEKVIRLLNDFKIYSRN 113
+ + A ++E++ L+ + N +++ K+
Sbjct: 110 VPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVR 169
Query: 114 GTH----ICMVFEVMGYNLLRLIARSDYKGIHIQN--------VRTIIKQVLEGLNYLHT 161
+ F + L + H + QV+ L LH
Sbjct: 170 LDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH 229
Query: 162 QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEV 221
++HT ++P +I++ G
Sbjct: 230 Y-GLVHTYLRPVDIVLDQR-----------------G----------------------- 248
Query: 222 YDISVKIADLGNACWIDDHFADE----IQTRQYRSVEVLIGAG-----YGPAADIWSTAC 272
V + + + + +L A D W+
Sbjct: 249 ---GVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305
Query: 273 MAFELATGDYLFDPKAGKEYSRDDDH--LAHIVELVGPIPKEV 313
+ + D D I IP+ V
Sbjct: 306 AIYWIWCADLPNT--------DDAALGGSEWIFRSCKNIPQPV 340
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 3e-19
Identities = 76/382 (19%), Positives = 118/382 (30%), Gaps = 111/382 (29%)
Query: 26 FNFRYHVIRK-LGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGR 83
F Y + LG G + V +L A+KI+ K E+ +L
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIARSDYKGIH 141
NV + L+ F+ +VFE M G ++L + R +
Sbjct: 70 HRNV-------------LELIEFFE----EEDRFYLVFEKMRGGSILSHIHKRRHFNE-- 110
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+++ V L++LH + I H D+KPENIL C ++
Sbjct: 111 -LEASVVVQDVASALDFLHNK-GIAHRDLKPENIL-CEHPNQ------------------ 149
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID------DHFADEIQTR----QYR 251
VKI D I E+ T +Y
Sbjct: 150 ---------------------VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 252 SVEVLIGA-----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV 306
+ EV+ Y D+WS + + L +G F + G + D
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA---- 244
Query: 307 GPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLP 365
F I G Y+ +K W+ S A D +
Sbjct: 245 ------------------CQNMLFESIQE----GKYE-FPDKD-WAH--ISCAAKDLISK 278
Query: 366 MLHVNQKLRASAADCLRHPWLN 387
+L + K R SAA L+HPW+
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQ 300
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-19
Identities = 69/368 (18%), Positives = 108/368 (29%), Gaps = 122/368 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGRK 84
RY R LG G F+ + D K A KIV + R+ EI + +++
Sbjct: 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL--- 98
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ 143
H V+ F+ + + +V E +LL L R K +
Sbjct: 99 --AHQH---------VVGFHGFFE----DNDFVFVVLELCRRRSLLELHKRR--KALTEP 141
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
R ++Q++ G YLH R+IH D+K N+
Sbjct: 142 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLF--------------------------- 173
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEI-QTRQYRSVEVLIGAG 260
L+ + VKI D G A + D + T Y + EVL G
Sbjct: 174 -LNEDL---------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 261 YGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
+ D+WS C+ + L G F + L
Sbjct: 218 HSFEVDVWSIGCIMYTLLVG-KPPF----------ETSCLKET----------------- 249
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
+ RI +Y K A + ML + R + +
Sbjct: 250 ----------YLRIKKN-----------EYSIPKHINPVAASLIQKMLQTDPTARPTINE 288
Query: 380 CLRHPWLN 387
L +
Sbjct: 289 LLNDEFFT 296
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 3e-19
Identities = 49/250 (19%), Positives = 82/250 (32%), Gaps = 70/250 (28%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
+Y + LG G F V + K K VK + EI +L
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR--- 59
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIHI- 142
H ++ L F+ + + M+FE + G ++ R+ +
Sbjct: 60 --H---------RNILHLHESFE----SMEELVMIFEFISGLDIFERINTS----AFELN 100
Query: 143 -QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ + + + QV E L +LH+ I H DI+PENI+ T+
Sbjct: 101 EREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIY-------------QTRR------- 139
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGA 259
++KI + G A + D+F +Y + EV
Sbjct: 140 ---------------------SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 260 GYGPAADIWS 269
A D+WS
Sbjct: 179 VVSTATDMWS 188
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 357 SDFA-DFLLPMLHVNQKLRASAADCLRHPWLN 387
S A DF+ +L +K R +A++ L+HPWL
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 4e-19
Identities = 76/378 (20%), Positives = 119/378 (31%), Gaps = 122/378 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--TARDEIVLLKAVGRKSN 86
Y + +G G + V ++ K VA+K + ++ EI +
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC----- 70
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNV 145
++ F + +V +++ G ++L +I KG H V
Sbjct: 71 ---------HHPNIVSYYTSF----VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117
Query: 146 ------RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
TI+++VLEGL YLH IH D+K NIL+ D G
Sbjct: 118 LDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGED-----------------G- 158
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV------ 253
SV+IAD G + ++ + V
Sbjct: 159 -------------------------SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 254 --EVLI-GAGYGPAADIWSTACMAFELATGD--YLFDPKAGKEYSRDDDHLAHIVELVGP 308
EV+ GY ADIWS A ELATG Y
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYH------------KYP---------- 231
Query: 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
P +VL T Q + ++ Q + K+ F + L
Sbjct: 232 -PMKVL--------MLTLQNDPPSLE-----TGVQDKEMLKKYGKS----FRKMISLCLQ 273
Query: 369 VNQKLRASAADCLRHPWL 386
+ + R +AA+ LRH +
Sbjct: 274 KDPEKRPTAAELLRHKFF 291
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 5e-19
Identities = 69/367 (18%), Positives = 108/367 (29%), Gaps = 120/367 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGRK 84
RY R LG G F+ + D K A KIV + R+ EI + +++
Sbjct: 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL--- 72
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ 143
H V+ F+ + + +V E +LL L R K +
Sbjct: 73 --AHQH---------VVGFHGFFE----DNDFVFVVLELCRRRSLLELHKRR--KALTEP 115
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
R ++Q++ G YLH R+IH D+K N+
Sbjct: 116 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLF--------------------------- 147
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEI-QTRQYRSVEVLIGAG 260
L+ + VKI D G A + D + T Y + EVL G
Sbjct: 148 -LNEDL---------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
+ D+WS C+ + L G F + L
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPF----------ETSCLKET------------------ 223
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+ RI +Y K A + ML + R + +
Sbjct: 224 ---------YLRIKKN-----------EYSIPKHINPVAASLIQKMLQTDPTARPTINEL 263
Query: 381 LRHPWLN 387
L +
Sbjct: 264 LNDEFFT 270
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 8e-19
Identities = 80/373 (21%), Positives = 123/373 (32%), Gaps = 124/373 (33%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTA--RDEIVLLKAVG 82
F RY+++ LG G F V D + A+K++ K+ DT+ E+ LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGI 140
H + +++L + + + +V E G L +I R +
Sbjct: 80 -----HPN---------IMKLFEILE----DSSSFYIVGELYTGGELFDEIIKRKRFSE- 120
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ IIKQV G+ Y+H I+H D+KPENIL+
Sbjct: 121 --HDAARIIKQVFSGITYMHKH-NIVHRDLKPENILL----------------------- 154
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIG 258
++ D +KI D G + D I T Y + EVL G
Sbjct: 155 -----------------ESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y D+WS + + L L G P
Sbjct: 198 -TYDEKCDVWSAGVILYIL---------------------------LSGTPP-------- 221
Query: 319 KTLRYF---TPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKL 373
F +R++ G Y W +A D + L + L
Sbjct: 222 -----FYGKNEYDILKRVET----GKYAFDLP--QWRTISDDAKDLIRKM---LTFHPSL 267
Query: 374 RASAADCLRHPWL 386
R +A CL HPW+
Sbjct: 268 RITATQCLEHPWI 280
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 1e-18
Identities = 50/294 (17%), Positives = 90/294 (30%), Gaps = 72/294 (24%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNV 87
+ I+ +G G F V+ + + D A+K ++ + ++ + E+ L + V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 88 H-------------------------------SSAYNTQASEKVIRLLNDFK-----IYS 111
SS A IR ++ F
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 112 RNGTHICMVFEVMGY----NLLRLIARSDYKG-IHIQNVRTIIKQVLEGLNYLHTQCRII 166
+ + ++ M NL + R I Q+ E + +LH++ ++
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLM 186
Query: 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISV 226
H D+KP NI K+G DF L + D
Sbjct: 187 HRDLKPSNIFF------------TMDDVVKVG------------DFGL---VTAM-DQDE 218
Query: 227 KIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
+ + ++ T+ Y S E + G Y DI+S + FEL
Sbjct: 219 EEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 1e-18
Identities = 72/373 (19%), Positives = 126/373 (33%), Gaps = 135/373 (36%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNV 87
+Y K+G G TV+ + D+ VA++ + Q + +EI++++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR-------- 72
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVR 146
+ ++ L+ + + G + +V E + G +L ++ + I
Sbjct: 73 ------ENKNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIA--- 119
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
+ ++ L+ L +LH+ ++IH DIK +NIL+ +D
Sbjct: 120 AVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGS------------------------ 154
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSV----------EV 255
VK+ D G F +I + RS EV
Sbjct: 155 -------------------VKLTDFG--------FCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 256 LIGAGYGPAADIWSTACMAFELATGD--YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
+ YGP DIWS MA E+ G+ YL +++ P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYL------------NEN-----------PLRA 224
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
L + N P L S F DFL L ++ +
Sbjct: 225 L---------------YLIATNGTP-----ELQNPEKLSA----IFRDFLNRCLEMDVEK 260
Query: 374 RASAADCLRHPWL 386
R SA + L+H +L
Sbjct: 261 RGSAKELLQHQFL 273
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 1e-18
Identities = 63/371 (16%), Positives = 110/371 (29%), Gaps = 107/371 (28%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAV 81
+ + + LG G V ++ + + ALK++ + R E+ L
Sbjct: 57 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-----RREVELHWRA 111
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGI 140
+ ++ +R+++ ++ + +V E + G L I +
Sbjct: 112 SQCPHI-------------VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 158
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ I+K + E + YLH+ I H D+KPEN+L
Sbjct: 159 TEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLY----------------------- 194
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG 258
++ + +K+ D G A H T Y + EVL
Sbjct: 195 -----------------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 237
Query: 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
Y + D+WS + + L G F YS
Sbjct: 238 EKYDKSCDMWSLGVIMYILLCGYPPF-------YSNHGLA-------------------- 270
Query: 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKLRAS 376
G RI G Y+ WS+ E LL R +
Sbjct: 271 ------ISPGMKTRIRM----GQYE-FPNPE-WSEVSEEVKMLIRNLL---KTEPTQRMT 315
Query: 377 AADCLRHPWLN 387
+ + HPW+
Sbjct: 316 ITEFMNHPWIM 326
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 2e-18
Identities = 69/368 (18%), Positives = 112/368 (30%), Gaps = 118/368 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA--RDEIVLLKAVGRKSN 86
+ RKLG G F V L + +K + D+ EI +LK++
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD---- 78
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIHI-Q 143
H + +I++ F+ + ++ +V E G LL R+++
Sbjct: 79 -HPN---------IIKIFEVFE----DYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V ++KQ++ L Y H+Q ++H D+KPENIL
Sbjct: 125 YVAELMKQMMNALAYFHSQ-HVVHKDLKPENIL--------------------------- 156
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAGY 261
T + KI D G A H + T Y + EV
Sbjct: 157 -FQDTSPHSPI------------KIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DV 202
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
DIWS + + L L G +P
Sbjct: 203 TFKCDIWSAGVVMYFL---------------------------LTGCLP----------- 224
Query: 322 RYF---TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378
F + + ++ E + +A D + L + + R SAA
Sbjct: 225 --FTGTSLEEVQQKATY----KEPNYAVECRPLTP-QAVDLLKQM---LTKDPERRPSAA 274
Query: 379 DCLRHPWL 386
L H W
Sbjct: 275 QVLHHEWF 282
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-18
Identities = 61/368 (16%), Positives = 107/368 (29%), Gaps = 107/368 (29%)
Query: 26 FNFRYHVIRK-LGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGR 83
Y + ++ LG G V + + ALK++ S + R E+
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA-----RQEVDHHWQASG 80
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHI 142
++ + +L+ ++ + ++ E M G L I +
Sbjct: 81 GPHI-------------VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE 127
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ I++ + + +LH+ I H D+KPEN+L
Sbjct: 128 REAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLY------------------------- 161
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261
++ D +K+ D G A + T Y + EVL Y
Sbjct: 162 ---------------TSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKY 206
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
+ D+WS + + L G F P +
Sbjct: 207 DKSCDMWSLGVIMYILLCG---FPPFYSNTGQAISPGM---------------------- 241
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSK--AEASDFADFLLPMLHVNQKLRASAAD 379
RRI G Y WS+ +A L L + R +
Sbjct: 242 --------KRRIRL----GQYG-FPNPE-WSEVSEDAKQLIRLL---LKTDPTERLTITQ 284
Query: 380 CLRHPWLN 387
+ HPW+N
Sbjct: 285 FMNHPWIN 292
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 70/252 (27%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTA--RDEIVLLKAVG 82
F Y + +LG G FS V + A I D E + + +
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIARSDYKGI 140
H ++RL + H ++F+++ G L ++AR Y
Sbjct: 69 -----H---------PNIVRLHDSIS----EEGHHYLIFDLVTGGELFEDIVAREYYSE- 109
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ I+Q+LE + + H ++H ++KPEN+L
Sbjct: 110 --ADASHCIQQILEAVLHCHQM-GVVHRNLKPENLL------------------------ 142
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257
L +VK+AD G A ++ + T Y S EVL
Sbjct: 143 -------------LASKLK---GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 258 GAGYGPAADIWS 269
YG D+W+
Sbjct: 187 KDPYGKPVDLWA 198
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 4e-18
Identities = 65/386 (16%), Positives = 113/386 (29%), Gaps = 117/386 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y +IR L G F+ + L +D F ALK + L K + +
Sbjct: 32 DYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSL-----------LEKKRDFTKSNN 78
Query: 89 SSAYNTQASEKV---IRLLNDFK----------IYSRNGTHICMVFE-VMG---YNLLRL 131
+ ++++ D K I + + +++E +
Sbjct: 79 DKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY--DEVYIIYEYMENDSILKFDEY 136
Query: 132 IARSDYKG---IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
D I IQ ++ IIK VL +Y+H + I H D+KP NILM
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM----------- 185
Query: 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
D VK++D G + ++ D +I+
Sbjct: 186 -DKNGR-------------------------------VKLSDFGESEYMVD---KKIKGS 210
Query: 249 ----QYRSVEVLIGAG--YGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAH 301
++ E G DIWS + + + F L
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN-VVPFS---------LKISLVE 260
Query: 302 IVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
+ + N + + + + +++ D
Sbjct: 261 LFNNIR-------------------TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDID 301
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
FL L N R ++ D L+H WL
Sbjct: 302 FLKLFLRKNPAERITSEDALKHEWLA 327
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 7e-18
Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 71/254 (27%)
Query: 36 LGWGHFSTVWLSWDLQDKTFVALKIVK-SDQVYADTARDEIVLLKAVGRKSNVHSSAYNT 94
LG G + V+ DL ++ +A+K + D Y+ +EI L K +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL------------- 76
Query: 95 QASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQN--VRTIIKQ 151
+ +++ L I + E V G +L L+ RS + + + KQ
Sbjct: 77 -KHKNIVQYLG----SFSENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQ 130
Query: 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSD 211
+LEGL YLH +I+H DIK +N+
Sbjct: 131 ILEGLKYLHDN-QIVHRDIKGDNV------------------------------------ 153
Query: 212 FSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ---TRQYRSVEVLIGA--GYGPAAD 266
L++ + V +KI+D G + + T QY + E++ GYG AAD
Sbjct: 154 --LINTYSGV----LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 267 IWSTACMAFELATG 280
IWS C E+ATG
Sbjct: 208 IWSLGCTIIEMATG 221
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 8e-18
Identities = 53/252 (21%), Positives = 91/252 (36%), Gaps = 72/252 (28%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA-------RDEIVLLKAV 81
Y + +LG G F+ V A K +K ++ + E+ +L+ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKG 139
+I L + F+ N T + ++ E V G L L +
Sbjct: 66 --------------RHPNIITLHDIFE----NKTDVVLILELVSGGELFDFLAEKESLTE 107
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+KQ+L+G++YLH++ RI H D+KPENI+
Sbjct: 108 ---DEATQFLKQILDGVHYLHSK-RIAHFDLKPENIM----------------------- 140
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLI 257
LLD + +K+ D G A I+ F + T ++ + E++
Sbjct: 141 --------------LLDKNVP--NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 184
Query: 258 GAGYGPAADIWS 269
G AD+WS
Sbjct: 185 YEPLGLEADMWS 196
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 357 SDFA-DFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391
S+ A DF+ +L + K R + A L H W+ R
Sbjct: 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-17
Identities = 61/249 (24%), Positives = 93/249 (37%), Gaps = 69/249 (27%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALK-IVKSDQVYADTARDEIVLLKAVGRK 84
+ + V +LG G S V+ + ALK + K+ R EI +L +
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLS-- 106
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGIHI 142
H +I+L F+ T I +V E V G L R++ + Y
Sbjct: 107 ---H---------PNIIKLKEIFE----TPTEISLVLELVTGGELFDRIVEKGYYSE--- 147
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
++ +KQ+LE + YLH + I+H D+KPEN+L
Sbjct: 148 RDAADAVKQILEAVAYLH-ENGIVHRDLKPENLL-------------------------- 180
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAG 260
PA D +KIAD G + ++ T Y + E+L G
Sbjct: 181 -----------YATPAP---DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 261 YGPAADIWS 269
YGP D+WS
Sbjct: 227 YGPEVDMWS 235
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-17
Identities = 59/368 (16%), Positives = 109/368 (29%), Gaps = 124/368 (33%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAV 81
+ + + LG G V ++ + + ALK++ + R E+ L
Sbjct: 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-----RREVELHWRA 67
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLL-RLIARSDYKG 139
+ + ++R+++ ++ + +V E + G L R+ R D +
Sbjct: 68 SQCPH-------------IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-QA 113
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ I+K + E + YLH+ I H D+KPEN+L
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLY---------------------- 150
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
++ + +K+ D G FA E
Sbjct: 151 ------------------TSKRPNAILKLTDFG--------FAKETTGE----------- 173
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y + D+WS + + L G F G
Sbjct: 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---------------------------- 205
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFA-DFLLPMLHVNQKLRASAA 378
G RI G Y+ WS+ S+ + +L R +
Sbjct: 206 -----ISPGMKTRIRM----GQYEFPNP--EWSE--VSEEVKMLIRNLLKTEPTQRMTIT 252
Query: 379 DCLRHPWL 386
+ + HPW+
Sbjct: 253 EFMNHPWI 260
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-17
Identities = 78/370 (21%), Positives = 123/370 (33%), Gaps = 129/370 (34%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ V+ KLG G + +V+ + + VA+K V + + + EI +++ + +
Sbjct: 30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK-EISIMQ----QCD-- 82
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
S V++ + T + +V E G + I R K + + TI
Sbjct: 83 --------SPHVVKYYGSY----FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATI 130
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
++ L+GL YLH R IH DIK NIL+ +
Sbjct: 131 LQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGH-------------------------- 163
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV----------EVLIG 258
K+AD G A + D T R+ EV+
Sbjct: 164 -----------------AKLADFGVAGQLTD-------TMAKRNTVIGTPFWMAPEVIQE 199
Query: 259 AGYGPAADIWSTACMAFELATGD--YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
GY ADIWS A E+A G Y D H P +
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPPYA------------DIH-----------PMRAI-- 234
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
+ P N P + WS +F DF+ L + + RA+
Sbjct: 235 ------FMIPT-------NPPP-----TFRKPELWSD----NFTDFVKQCLVKSPEQRAT 272
Query: 377 AADCLRHPWL 386
A L+HP++
Sbjct: 273 ATQLLQHPFV 282
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 3e-17
Identities = 63/363 (17%), Positives = 112/363 (30%), Gaps = 118/363 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRK 84
+ + R LG G F V+L+ + Q+K +ALK++ Q+ R EI + + R
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RH 73
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ 143
N ++R+ N F + I ++ E L + + + Q
Sbjct: 74 PN-------------ILRMYNYFH----DRKRIYLMLEFAPRGELYKELQKH--GRFDEQ 114
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
T ++++ + L+Y H + ++IH DIKPEN+L
Sbjct: 115 RSATFMEELADALHYCH-ERKVIHRDIKPENLL--------------------------- 146
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQYRSVEVLIGAGYG 262
+ +KIAD G + + T Y E++ G +
Sbjct: 147 -MGYKG---------------ELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHD 190
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
D+W + +E G FD
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSP----------------------------------- 215
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382
+ RRI N+ + + D + +L + R +
Sbjct: 216 --SHTETHRRIVNV-----------DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262
Query: 383 HPW 385
HPW
Sbjct: 263 HPW 265
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 3e-17
Identities = 56/253 (22%), Positives = 84/253 (33%), Gaps = 72/253 (28%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD-------EIVLLKAV 81
Y + LG G F TV+ L D+ VA+K++ ++V + E+ LL V
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE--VMGYNLLRLIARSDYKG 139
H VIRLL+ F+ +V E + +L I KG
Sbjct: 92 -GAGGGHPG---------VIRLLDWFE----TQEGFMLVLERPLPAQDLFDYITE---KG 134
Query: 140 -IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ R QV+ + + H ++H DIK ENIL
Sbjct: 135 PLGEGPSRCFFGQVVAAIQHCH-SRGVVHRDIKDENIL---------------------- 171
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFADEIQTRQYRSVEVLI 257
+D K+ D G+ + D + D TR Y E +
Sbjct: 172 ------IDLRRGC--------------AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWIS 211
Query: 258 GAGY-GPAADIWS 269
Y A +WS
Sbjct: 212 RHQYHALPATVWS 224
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 5e-17
Identities = 59/255 (23%), Positives = 95/255 (37%), Gaps = 72/255 (28%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK-------SDQVYADTARDEIVLL 78
Y + +LG G F+ V + A K +K V + E+ +L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSD 136
+ V H +I L + ++ N T + ++ E V G L L +
Sbjct: 70 RQVL-----H---------PNIITLHDVYE----NRTDVVLILELVSGGELFDFLAQKES 111
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
+ + IKQ+L+G+NYLHT+ +I H D+KPENI+
Sbjct: 112 LSE---EEATSFIKQILDGVNYLHTK-KIAHFDLKPENIM-------------------- 147
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVE 254
LLD + I K+ D G A I+D F + T ++ + E
Sbjct: 148 -----------------LLDKNIPIPHI--KLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 255 VLIGAGYGPAADIWS 269
++ G AD+WS
Sbjct: 189 IVNYEPLGLEADMWS 203
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 357 SDFA-DFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
S+ A DF+ +L + R + + LRHPW+ P +
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQ 282
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 5e-17
Identities = 53/251 (21%), Positives = 91/251 (36%), Gaps = 65/251 (25%)
Query: 26 FNFRYHVI-RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVLLKAV 81
FN Y + ++LG G F+ V A K +K + D EI +L+
Sbjct: 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA 85
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGI 140
++ +VI L ++ N + I ++ E G + L + +
Sbjct: 86 -------------KSCPRVINLHEVYE----NTSEIILILEYAAGGEIFSLCLPELAEMV 128
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+V +IKQ+LEG+ YLH I+H D+KP+NIL+
Sbjct: 129 SENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILL----------------------- 164
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG 258
++ +KI D G + I + + T +Y + E+L
Sbjct: 165 -----------------SSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNY 207
Query: 259 AGYGPAADIWS 269
A D+W+
Sbjct: 208 DPITTATDMWN 218
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 357 SDFA-DFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
S A DF+ +L N + R +A CL H WL
Sbjct: 261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE 297
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 9e-17
Identities = 50/260 (19%), Positives = 89/260 (34%), Gaps = 71/260 (27%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGRK 84
+ V LG G F+ V+ + + VA+K++ +Y E+ + +
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL--- 68
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ 143
H S ++ L N F+ + ++ +V E + R + K
Sbjct: 69 --KHPS---------ILELYNYFE----DSNYVYLVLEMCHNGEMNRYLKNRV-KPFSEN 112
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
R + Q++ G+ YLH+ I+H D+ N+L
Sbjct: 113 EARHFMHQIITGMLYLHSH-GILHRDLTLSNLL--------------------------- 144
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLG--NACWIDDHFADEI-QTRQYRSVEVLIGAG 260
L M ++KIAD G + + T Y S E+ +
Sbjct: 145 -LTRNM---------------NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 261 YGPAADIWSTACMAFELATG 280
+G +D+WS CM + L G
Sbjct: 189 HGLESDVWSLGCMFYTLLIG 208
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 1e-16
Identities = 50/248 (20%), Positives = 85/248 (34%), Gaps = 65/248 (26%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGRK 84
Y ++ +LG G F V + K + + T ++EI ++ +
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-- 106
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQ 143
H K+I L + F+ + + ++ E + G L IA DYK +
Sbjct: 107 ---H---------PKLINLHDAFE----DKYEMVLILEFLSGGELFDRIAAEDYK-MSEA 149
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V ++Q EGL ++H I+H DIKPENI+
Sbjct: 150 EVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKAS-------------------- 188
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261
SVKI D G A ++ T ++ + E++
Sbjct: 189 ---------------------SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227
Query: 262 GPAADIWS 269
G D+W+
Sbjct: 228 GFYTDMWA 235
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 357 SDFA-DFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
S A DF+ +L + R + D L HPWL S+
Sbjct: 278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN 314
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 68/378 (17%), Positives = 120/378 (31%), Gaps = 138/378 (36%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKS 85
+ ++ +LG G F V+ + + + A K++++ + D EI +L
Sbjct: 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATC---- 73
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+++LL + + ++ E + I +G+ +
Sbjct: 74 ----------DHPYIVKLLGAYYH----DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 119
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + +Q+LE LN+LH++ RIIH D+K N+LM ++ D
Sbjct: 120 QVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGD----------------------- 155
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR-------------- 251
+++AD G + T Q R
Sbjct: 156 --------------------IRLADFGVSAKNLK-------TLQKRDSFIGTPYWMAPEV 188
Query: 252 -SVEVLIGAGYGPAADIWSTACMAFELATGD--YLFDPKAGKEYSRDDDHLAHIVELVGP 308
E + Y ADIWS E+A + + + +
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH------------ELN---------- 226
Query: 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
P VL + + P L WS +F DFL L
Sbjct: 227 -PMRVL--------LKIAK-------SDPP-----TLLTPSKWSV----EFRDFLKIALD 261
Query: 369 VNQKLRASAADCLRHPWL 386
N + R SAA L HP++
Sbjct: 262 KNPETRPSAAQLLEHPFV 279
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 2e-16
Identities = 48/297 (16%), Positives = 89/297 (29%), Gaps = 107/297 (36%)
Query: 13 RPGGYCP-----------VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKI 60
G+CP + GD+ +Y V + G ++L+ D + V LK
Sbjct: 54 ASEGWCPYCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKG 113
Query: 61 VKS--DQVYADTARDE-----------IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107
+ D A E IV + ++ H
Sbjct: 114 LVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP---------------- 157
Query: 108 KIYSRNGTHICMVFEVM----GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC 163
+ + VM G +L R + + + + ++L L+YLH+
Sbjct: 158 -----------VGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI- 201
Query: 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYD 223
+++ D+KPENI++ +
Sbjct: 202 GLVYNDLKPENIMLTEE------------------------------------------- 218
Query: 224 ISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
+K+ DLG I+ F T +++ E++ G A DI++ L
Sbjct: 219 -QLKLIDLGAVSRINS-FGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLD 272
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-16
Identities = 73/374 (19%), Positives = 119/374 (31%), Gaps = 126/374 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD-----EIVLLKAVGR 83
+Y + LG G + V D + A+KI+K ++ + EI LL+ + R
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-R 64
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMG--YNLLRLIARSDYKGI 140
N VI+L++ +Y+ + MV E + +L + K
Sbjct: 65 HKN-------------VIQLVD--VLYNEEKQKMYMVMEYCVCGMQEMLDSVPE---KRF 106
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ Q+++GL YLH+Q I+H DIKP N+L
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLL------------------------ 141
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTRQ----YRSVEV 255
L + ++KI+ LG A + AD+ +T Q ++ E+
Sbjct: 142 ----LTT---------------GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182
Query: 256 LIGA-GY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313
G + G DIWS + + TG Y F + D++ +
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPF----------EGDNIYKL----------- 221
Query: 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL 373
F I Y +D L ML
Sbjct: 222 ----------------FENI-----------GKGSYAIPGDCGPPLSDLLKGMLEYEPAK 254
Query: 374 RASAADCLRHPWLN 387
R S +H W
Sbjct: 255 RFSIRQIRQHSWFR 268
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 4e-16
Identities = 69/372 (18%), Positives = 121/372 (32%), Gaps = 128/372 (34%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD-------EIVLLKAV 81
+Y V LG G F +V+ + D VA+K V+ D++ E+VLLK V
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGY-NLLRLIARSDYKG 139
VIRLL+ F+ ++ E +L I +G
Sbjct: 104 -SSGFSG-----------VIRLLDWFE----RPDSFVLILERPEPVQDLFDFITE---RG 144
Query: 140 -IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + R+ QVLE + + H C ++H DIK ENIL +D ++
Sbjct: 145 ALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENIL--IDLNRGE------------- 188
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFADEIQTRQYRSVEVLI 257
+K+ D G+ + D + D TR Y E +
Sbjct: 189 ---------------------------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 221
Query: 258 GAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
Y G +A +WS + +++ GD F+ D+
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFE---------HDE------------------- 253
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
+++ + + + +S+ + L + R +
Sbjct: 254 --------------------------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPT 287
Query: 377 AADCLRHPWLNP 388
+ HPW+
Sbjct: 288 FEEIQNHPWMQD 299
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 4e-16
Identities = 71/372 (19%), Positives = 126/372 (33%), Gaps = 134/372 (36%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA--RDEIVLLKAVGRKSN 86
+ + K+G G F V+ D + + VA+KI+ ++ + + EI +L
Sbjct: 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC----- 77
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
S V + + T + ++ E +G + + +
Sbjct: 78 ---------DSPYVTKYYGSYL----KDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA 122
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
TI++++L+GL+YLH++ + IH DIK N+L+ +
Sbjct: 123 TILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGE------------------------ 157
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV----------EVL 256
VK+AD G A + D T+ R+ EV+
Sbjct: 158 -------------------VKLADFGVAGQLTD-------TQIKRNTFVGTPFWMAPEVI 191
Query: 257 IGAGYGPAADIWSTACMAFELATGD--YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
+ Y ADIWS A ELA G+ + + H P +VL
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHS------------ELH-----------PMKVL 228
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
+ P+ N P L +SK +F+ L+ R
Sbjct: 229 --------FLIPK-------NNPP-----TLEGN--YSK----PLKEFVEACLNKEPSFR 262
Query: 375 ASAADCLRHPWL 386
+A + L+H ++
Sbjct: 263 PTAKELLKHKFI 274
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 6e-16
Identities = 72/386 (18%), Positives = 122/386 (31%), Gaps = 114/386 (29%)
Query: 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLL 78
VQ+ +Y + ++G G + V L+++ D T+ A+K++ ++
Sbjct: 9 CVQLN-----QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLI--RQAGFPRRP 61
Query: 79 KAVGRKSNVHSSAYNTQASEKVIR------LL---NDFKIY----SRNGTHICMVFE-VM 124
G + E+V + L N K+ N H+ MVFE V
Sbjct: 62 PPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVN 121
Query: 125 GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
++ + R + +++G+ YLH Q +IIH DIKP N+L+
Sbjct: 122 QGPVMEVPTLKPLS---EDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLV------- 170
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
H KI +DF + +NE A L N
Sbjct: 171 -----GEDGHIKI------------ADFGV---SNEFKG---SDALLSNTV--------- 198
Query: 245 IQTRQYRSVEVLIGA--GY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAH 301
T + + E L + G A D+W+ + G F D+
Sbjct: 199 -GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM---------DE----R 244
Query: 302 IVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFAD 361
I+ L +I + + + A D D
Sbjct: 245 IMCL------------------------HSKIKS----QALE-----FPDQPDIAEDLKD 271
Query: 362 FLLPMLHVNQKLRASAADCLRHPWLN 387
+ ML N + R + HPW+
Sbjct: 272 LITRMLDKNPESRIVVPEIKLHPWVT 297
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 8e-16
Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 113/385 (29%)
Query: 10 MEYRPGGYCPVQIGDLFNF-RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA 68
M+ P P+ + + + RY ++ +G G+F L D K VA+K ++
Sbjct: 1 MDRAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID 60
Query: 69 DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYN 127
+ + EI+ +++ R N ++R ++ TH+ ++ E G
Sbjct: 61 ENVQREIINHRSL-RHPN-------------IVRF---KEVIL-TPTHLAIIMEYASGGE 102
Query: 128 LLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187
L I R +Q+L G++Y H+ +I H D+K EN L
Sbjct: 103 LYERICN--AGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTL----------- 148
Query: 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLG-NACWIDDHFAD-EI 245
LD + + +KI D G + + +
Sbjct: 149 -----------------LDGSPA-------------PRLKICDFGYSKSSVLHSQPKSTV 178
Query: 246 QTRQYRSVEVLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
T Y + EVL+ Y G AD+WS + + G Y F +D
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF----------EDPEEPR--- 225
Query: 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHW-SKAEASDFADFL 363
++R+ + ++L+ KY S L
Sbjct: 226 ------------------------DYRKT-------IQRILSVKYSIPDDIRISPECCHL 254
Query: 364 LP-MLHVNQKLRASAADCLRHPWLN 387
+ + + R S + H W
Sbjct: 255 ISRIFVADPATRISIPEIKTHSWFL 279
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 4e-15
Identities = 55/276 (19%), Positives = 91/276 (32%), Gaps = 81/276 (29%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK- 79
+ RY + LG+G S V L+ DL+D VA+K++++D ARD L+
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-----ARDPSFYLRF 59
Query: 80 -----AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM----GYNLLR 130
++ ++ + + + VM G L
Sbjct: 60 RREAQNAAALNHPA--------------IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 105
Query: 131 LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190
++ + + +I + LN+ H IIH D+KP NI++
Sbjct: 106 IVHT--EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISAT---------- 152
Query: 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR-- 248
+VK+ D G A I D QT
Sbjct: 153 -------N--------------------------AVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 249 ----QYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
QY S E G +D++S C+ +E+ TG
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 8e-15
Identities = 61/368 (16%), Positives = 123/368 (33%), Gaps = 123/368 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
Y +++ +G G+F+ V L+ + VA+KI+ + + E+ ++K +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHP 74
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQN 144
N +++L F++ + ++ E G + + + +
Sbjct: 75 N-------------IVKL---FEVIE-TEKTLYLIMEYASGGEVFDYLVAHGR--MKEKE 115
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
R+ +Q++ + Y H + I+H D+K EN+L
Sbjct: 116 ARSKFRQIVSAVQYCHQKR-IVHRDLKAENLL---------------------------- 146
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR----QYRSVEVLIGAG 260
LD+ M ++KIAD G + ++ Y + E+ G
Sbjct: 147 LDADM---------------NIKIADFGFSNEFTV--GGKLDAFCGAPPYAAPELFQGKK 189
Query: 261 Y-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y GP D+WS + + L +G F D +L +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPF----------DGQNLKEL----------------- 222
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
R+ G Y++ ++ S D + L L +N R +
Sbjct: 223 ----------RERVLR----GKYRI---PFYMST----DCENLLKRFLVLNPIKRGTLEQ 261
Query: 380 CLRHPWLN 387
++ W+N
Sbjct: 262 IMKDRWIN 269
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 1e-14
Identities = 60/285 (21%), Positives = 102/285 (35%), Gaps = 86/285 (30%)
Query: 1 MLFDQQESYMEYRPGGYCPVQ-IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALK 59
M ++ +E C + +Y + LG G F VW + D + V +K
Sbjct: 1 MALEEPPKAVELEGLAACEGEYSQ-----KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVK 55
Query: 60 IVKSDQVYADTARD---------EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIY 110
+K ++V D + EI +L V H++ +I++L+ F+
Sbjct: 56 FIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-----EHAN---------IIKVLDIFE-- 99
Query: 111 SRNGTHICMVFE--VMGYNLLRLIARSDYKG-IHIQNVRTIIKQVLEGLNYLHTQCRIIH 167
N +V E G +L I R + I +Q++ + YL + IIH
Sbjct: 100 --NQGFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLK-DIIH 153
Query: 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVK 227
DIK ENI+ + ++K
Sbjct: 154 RDIKDENIV----------------------------IAEDF---------------TIK 170
Query: 228 IADLGNACWI--DDHFADEIQTRQYRSVEVLIGAGY-GPAADIWS 269
+ D G+A ++ F T +Y + EVL+G Y GP ++WS
Sbjct: 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWS 215
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 2e-14
Identities = 54/253 (21%), Positives = 90/253 (35%), Gaps = 73/253 (28%)
Query: 26 FNFRYHVIRK--LGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVG 82
N Y V + LG G F V + +A KI+ + ++EI ++ +
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD 144
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLL-RLIARSDYKGI 140
H +I+L + F+ + I +V E V G L R+I +
Sbjct: 145 -----H---------ANLIQLYDAFE----SKNDIVLVMEYVDGGELFDRIID----ESY 182
Query: 141 HI--QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
++ + +KQ+ EG+ ++H Q I+H D+KPENIL CV+ D
Sbjct: 183 NLTELDTILFMKQICEGIRHMH-QMYILHLDLKPENIL-CVNRD---------------- 224
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVL 256
+KI D G A + T ++ + EV+
Sbjct: 225 ------------------------AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV 260
Query: 257 IGAGYGPAADIWS 269
D+WS
Sbjct: 261 NYDFVSFPTDMWS 273
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 357 SDFA-DFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392
S+ A +F+ +L + R SA++ L+HPWL+ + H
Sbjct: 316 SEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLH 352
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 3e-14
Identities = 88/396 (22%), Positives = 136/396 (34%), Gaps = 133/396 (33%)
Query: 10 MEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
M + V+IG Y + LG G F V + VA+KI+ ++ +
Sbjct: 3 MAEKQKHDGRVKIG-----HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL 57
Query: 70 TARD----EIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VM 124
EI LK R + +I+L +++ S + I MV E V
Sbjct: 58 DVVGKIRREIQNLKLF-RHPH-------------IIKL---YQVIS-TPSDIFMVMEYVS 99
Query: 125 GYNLLRLIARSDYKG-IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183
G L I + G + + R + +Q+L G++Y H ++H D+KPEN+L
Sbjct: 100 GGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVL------- 148
Query: 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLG-NACWIDDHFA 242
LD+ M + KIAD G + D F
Sbjct: 149 ---------------------LDAHM---------------NAKIADFGLSNMMSDGEF- 171
Query: 243 DEIQTR----QYRSVEVLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDD 297
++T Y + EV+ G Y GP DIWS+ + + L G F DDD
Sbjct: 172 --LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF----------DDD 219
Query: 298 HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEAS 357
H+ TL F++I + G++ + +
Sbjct: 220 HV-------------------PTL--------FKKICD----GIFYT---PQYLN----P 241
Query: 358 DFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSHY 393
L ML V+ RA+ D H W Y
Sbjct: 242 SVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKY 277
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 5e-14
Identities = 51/260 (19%), Positives = 84/260 (32%), Gaps = 71/260 (27%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
V +G G F V W +D VA+K ++S+ E+ L V + V
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAKD---VAIKQIESESERKAFIV-ELRQLSRVNHPNIVKL 66
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTI 148
+C+V E +L ++ ++ +
Sbjct: 67 YGACLN--------------------PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 149 I-KQVLEGLNYLHTQCR--IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
Q +G+ YLH+ +IH D+KP N+
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNL------------------------------ 136
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAA 265
LL V +KI D G AC I H + + + + EV G+ Y
Sbjct: 137 --------LLVAGGTV----LKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 266 DIWSTACMAFELATGDYLFD 285
D++S + +E+ T FD
Sbjct: 185 DVFSWGIILWEVITRRKPFD 204
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 6e-14
Identities = 86/387 (22%), Positives = 132/387 (34%), Gaps = 133/387 (34%)
Query: 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----E 74
V+IG Y + LG G F V + VA+KI+ ++ + E
Sbjct: 7 RVKIG-----HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIA 133
I LK R + +I+L +++ S T MV E V G L I
Sbjct: 62 IQNLKLF-RHPH-------------IIKL---YQVIS-TPTDFFMVMEYVSGGELFDYIC 103
Query: 134 RSDYKG-IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDAT 192
+ G + R + +Q+L ++Y H ++H D+KPEN+L
Sbjct: 104 K---HGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVL---------------- 143
Query: 193 KHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLG-NACWIDDHFADEIQTR--- 248
LD+ M + KIAD G + D F ++T
Sbjct: 144 ------------LDAHM---------------NAKIADFGLSNMMSDGEF---LRTSCGS 173
Query: 249 -QYRSVEVLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV 306
Y + EV+ G Y GP DIWS + + L G F DD+H+
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF----------DDEHV------- 216
Query: 307 GPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPM 366
TL F++I G++ + + + A L+ M
Sbjct: 217 ------------PTL--------FKKIRG----GVFYI---PEYLN----RSVATLLMHM 245
Query: 367 LHVNQKLRASAADCLRHPWLNPRRSHY 393
L V+ RA+ D H W Y
Sbjct: 246 LQVDPLKRATIKDIREHEWFKQDLPSY 272
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 6e-14
Identities = 51/274 (18%), Positives = 87/274 (31%), Gaps = 84/274 (30%)
Query: 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLL-- 78
+ G F Y + R +G G V+ + D + VALK++ + D +
Sbjct: 28 REGTQFG-PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMS-----ETLSSDPVFRTRM 81
Query: 79 ----KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR---NGTH-ICMVFEVMGYNLLR 130
+ GR H V+ I+ +G + M + G +L
Sbjct: 82 QREARTAGRLQEPH-----------VVP------IHDFGEIDGQLYVDMRL-INGVDLAA 123
Query: 131 LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARD 190
++ R + I++Q+ L+ H H D+KPENIL+
Sbjct: 124 MLRR--QGPLAPPRAVAIVRQIGSALDAAH-AAGATHRDVKPENILV------------- 167
Query: 191 ATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQ 246
+ DF + D G A D + +
Sbjct: 168 -----------------SADDF-------------AYLVDFGIASATTDEKLTQLGNTVG 197
Query: 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
T Y + E + ADI++ C+ +E TG
Sbjct: 198 TLYYMAPERFSESHATYRADIYALTCVLYECLTG 231
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 8e-14
Identities = 74/376 (19%), Positives = 125/376 (33%), Gaps = 127/376 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGRK 84
Y + LG G F V L+ + + VALK + + EI LK + R
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RH 68
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG-IHIQ 143
+ +I+L + + + T I MV E G L I K +
Sbjct: 69 PH-------------IIKL---YDVIT-TPTDIVMVIEYAGGELFDYIVE---KKRMTED 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
R +Q++ + Y H +I+H D+KPEN+L
Sbjct: 109 EGRRFFQQIICAIEYCHRH-KIVHRDLKPENLL--------------------------- 140
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWI-DDHFADEIQTR----QYRSVEVLIG 258
LD + +VKIAD G + + D +F ++T Y + EV+ G
Sbjct: 141 -LDDNL---------------NVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVING 181
Query: 259 AGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
Y GP D+WS + + + G F DD+ + ++
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPF----------DDEFIPNL--------------- 216
Query: 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377
F+++++ +Y + S + M+ + R +
Sbjct: 217 ------------FKKVNS----CVYVM---PDFLS----PGAQSLIRRMIVADPMQRITI 253
Query: 378 ADCLRHPWLNPRRSHY 393
+ R PW N Y
Sbjct: 254 QEIRRDPWFNVNLPDY 269
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 1e-13
Identities = 59/270 (21%), Positives = 94/270 (34%), Gaps = 77/270 (28%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAV 81
IG + N RY ++ KLG G STV+L+ D VA+K + E + +
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP-----REKE----ETL 55
Query: 82 GR-KSNVHSSAYNTQASEKVIRLLNDFKI-----YSRNGTHICMVFE-VMGYNLLRLIAR 134
R + VH+S+ L+ I +V E + G L I
Sbjct: 56 KRFEREVHNSS-----------QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES 104
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
+ + + Q+L+G+ + H RI+H DIKP+NIL+ +
Sbjct: 105 --HGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSN-------------- 147
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQY 250
++KI D G A + + + T QY
Sbjct: 148 ---K--------------------------TLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 251 RSVEVLIGAGYGPAADIWSTACMAFELATG 280
S E G DI+S + +E+ G
Sbjct: 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 2e-13
Identities = 61/368 (16%), Positives = 104/368 (28%), Gaps = 118/368 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGRKSN 86
+ +++ LG G + V L+ + + VA+KIV + EI + K + N
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHEN 66
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
V++ + G + E G L I G+ +
Sbjct: 67 -------------VVKF---YGHRR-EGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDA 107
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ Q++ G+ YLH I H DIKPEN+L L
Sbjct: 108 QRFFHQLMAGVVYLHGI-GITHRDIKPENLL----------------------------L 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTR----QYRSVEVLIGAG 260
D ++KI+D G A + + + Y + E+L
Sbjct: 139 DERD---------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 261 Y-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
+ D+WS + + G+ + D E + +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW-----------DQPSDSCQEY-----SDWKEKK-- 225
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
+ PW S L +L N R + D
Sbjct: 226 ---TYLN-----------PW---------KKID----SAPLALLHKILVENPSARITIPD 258
Query: 380 CLRHPWLN 387
+ W N
Sbjct: 259 IKKDRWYN 266
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 3e-13
Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 4/159 (2%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
+ D+ ++ + +K+G G F ++L++ A +VK + E+ +
Sbjct: 29 KVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQ 88
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDF-KIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
V +K + Q I L + ++ MV E +G +L ++
Sbjct: 89 RVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKI--SGQNG 146
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
V + ++L+ L Y+H +H DIK N+L+
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLL 184
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 6e-13
Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 84/272 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNV- 87
+ ++ +G G + V+ ++ A+K++ + + EI +LK N+
Sbjct: 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 88 --HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQN 144
+ + +L + M E G ++ LI + + +
Sbjct: 85 TYYGAFIKKNPPGMDDQLW------------LVM--EFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+ I +++L GL++LH ++IH DIK +N+L+ + +
Sbjct: 131 IAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAE---------------------- 167
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR------------- 251
VK+ D G + +D T R
Sbjct: 168 ---------------------VKLVDFGVSAQLDR-------TVGRRNTFIGTPYWMAPE 199
Query: 252 --SVEVLIGAGYGPAADIWSTACMAFELATGD 281
+ + A Y +D+WS A E+A G
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGA 231
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 6e-13
Identities = 61/368 (16%), Positives = 104/368 (28%), Gaps = 118/368 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGRKSN 86
+ +++ LG G + V L+ + + VA+KIV + EI + K + N
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHEN 66
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNV 145
V++ + G + E G L I G+ +
Sbjct: 67 -------------VVKF---YGHRR-EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDA 107
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ Q++ G+ YLH I H DIKPEN+L L
Sbjct: 108 QRFFHQLMAGVVYLHGI-GITHRDIKPENLL----------------------------L 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI-QTR----QYRSVEVLIGAG 260
D ++KI+D G A + + + Y + E+L
Sbjct: 139 DERD---------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 261 Y-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
+ D+WS + + G+ + D E + +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW-----------DQPSDSCQEY-----SDWKEKK-- 225
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
+ PW S L +L N R + D
Sbjct: 226 ---TYLN-----------PW---------KKID----SAPLALLHKILVENPSARITIPD 258
Query: 380 CLRHPWLN 387
+ W N
Sbjct: 259 IKKDRWYN 266
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 1e-12
Identities = 51/261 (19%), Positives = 88/261 (33%), Gaps = 69/261 (26%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVK--SDQVYADTARD---EIVLLKAVGRK 84
+ +G G F V+ W + VA+K + D+ + T + E L +
Sbjct: 10 TLEEIIGIGGFGKVYRAFWIGDE---VAVKAARHDPDEDISQTIENVRQEAKLFAMLK-- 64
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQ 143
H +I L ++C+V E L R+++ K I
Sbjct: 65 ---H---------PNIIALRG----VCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPD 105
Query: 144 NVRTIIKQVLEGLNYLHTQC--RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ Q+ G+NYLH + IIH D+K NIL
Sbjct: 106 ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL------------------------- 140
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-DEIQTRQYRSVEVLIGAG 260
+ + + L + +KI D G A + + EV+ +
Sbjct: 141 ---ILQKVENGDLSNK-------ILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM 190
Query: 261 YGPAADIWSTACMAFELATGD 281
+ +D+WS + +EL TG+
Sbjct: 191 FSKGSDVWSYGVLLWELLTGE 211
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 2e-12
Identities = 44/269 (16%), Positives = 87/269 (32%), Gaps = 77/269 (28%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTA--------RDEIVLLKAVGR 83
+++G G F V ++DK+ VA+K + +T + E+ ++ +
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-- 80
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNG---THICMVFEVMGY-NLLRLIARSDYKG 139
H +++L G MV E + +L + +
Sbjct: 81 ---NH---------PNIVKLY---------GLMHNPPRMVMEFVPCGDLYHRLLDKAHP- 118
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQ-CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
I ++ + G+ Y+ Q I+H D++ NI
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI----------------------- 155
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG 258
L +E + K+AD G + + + Q+ + E +
Sbjct: 156 ---------------FLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 259 AG--YGPAADIWSTACMAFELATGDYLFD 285
Y AD +S A + + + TG+ FD
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFD 229
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 2e-12
Identities = 44/259 (16%), Positives = 91/259 (35%), Gaps = 62/259 (23%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
+ +G G F V+ W + VA++++ ++ D + E++ + R
Sbjct: 36 EIGELIGKGRFGQVYHGRWH-GE---VAIRLIDIERDNEDQLKAFKREVMAYRQT-R--- 87
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNV 145
H E V+ + + H+ ++ + G L ++ + + +
Sbjct: 88 -H---------ENVVLFMG----ACMSPPHLAIITSLCKGRTLYSVVRDAKIV-LDVNKT 132
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
R I +++++G+ YLH + I+H D+K +N+ D KV I
Sbjct: 133 RQIAQEIVKGMGYLHAK-GILHKDLKSKNVF--YDNGKV-----------VIT------- 171
Query: 206 DSTMSDF---SLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262
DF S+ G C + A EI RQ +
Sbjct: 172 -----DFGLFSISGVLQAGRREDKLRIQNGWLCHL----APEI-IRQLSPDTEEDKLPFS 221
Query: 263 PAADIWSTACMAFELATGD 281
+D+++ + +EL +
Sbjct: 222 KHSDVFALGTIWYELHARE 240
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-12
Identities = 51/261 (19%), Positives = 95/261 (36%), Gaps = 74/261 (28%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
++ K+G G F TV W D VA+KI+ +A+ + E+ ++K + R N
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRL-RHPN 95
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKG-IHIQN 144
+ + + ++ +V E + +L RL+ +S + + +
Sbjct: 96 I-------------VLFMG----AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 145 VRTIIKQVLEGLNYLHTQ-CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ V +G+NYLH + I+H ++K N+L VD
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL--VDKKYT------------------- 177
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFAD---EIQTRQYRSVEVLIGAG 260
VK+ D G + F T ++ + EVL
Sbjct: 178 ----------------------VKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 261 YGPAADIWSTACMAFELATGD 281
+D++S + +ELAT
Sbjct: 216 SNEKSDVYSFGVILWELATLQ 236
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 5e-12
Identities = 43/263 (16%), Positives = 79/263 (30%), Gaps = 77/263 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ +R++G G F V+ + D+++ VA+K + ++ +I+ +K
Sbjct: 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-- 112
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
I+ + +V E + L+ K + + +
Sbjct: 113 --------HPNTIQYRGCYL----REHTAWLVMEYCLGSASDLL-EVHKKPLQEVEIAAV 159
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
L+GL YLH+ +IH D+K NIL+
Sbjct: 160 THGALQGLAYLHSH-NMIHRDVKAGNILLSEPGL-------------------------- 192
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ-------YRSVEVLIG--- 258
VK+ D G A + + + EV++
Sbjct: 193 -----------------VKLGDFG--------SASIMAPANSFVGTPYWMAPEVILAMDE 227
Query: 259 AGYGPAADIWSTACMAFELATGD 281
Y D+WS ELA
Sbjct: 228 GQYDGKVDVWSLGITCIELAERK 250
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 8e-12
Identities = 48/268 (17%), Positives = 86/268 (32%), Gaps = 89/268 (33%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
V +++G G F TV+ W VA+K++ + E+ +L+ R
Sbjct: 27 TVGQRIGSGSFGTVYKGKW----HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-R--- 78
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGT----HICMVFEVM-GYNLLRLIARSDYKGIH 141
H ++ + G + +V + G +L + S+ K
Sbjct: 79 -H---------VNILLFM---------GYSTAPQLAIVTQWCEGSSLYHHLHASETK-FE 118
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
++ + I +Q G++YLH IIH D+K NI + D
Sbjct: 119 MKKLIDIARQTARGMDYLH-AKSIIHRDLKSNNIF--LHEDNT----------------- 158
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR-----QYRSVEVL 256
VKI D G A + + + EV+
Sbjct: 159 ------------------------VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 257 IGAGYGP---AADIWSTACMAFELATGD 281
P +D+++ + +EL TG
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 6e-11
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
RY + RK+G G F ++L D+ VA+K+ + E + K + +
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-QLHIESKIYKMMQGGVGIP 68
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ + G + MV E++G +L L K ++ V +
Sbjct: 69 T-----------------IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-FSLKTVLLL 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ + Y+H++ IH D+KP+N LM
Sbjct: 111 ADQMISRIEYIHSKN-FIHRDVKPDNFLM 138
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 9e-11
Identities = 28/149 (18%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ + RK+G G F ++L ++Q VA+K+ + E + + + + +
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP-QLLYESKIYRILQGGTGIP 66
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ + + G + +V +++G +L L K + ++ V +
Sbjct: 67 N-----------------VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK-LSLKTVLML 108
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ + ++H++ +H DIKP+N LM
Sbjct: 109 ADQMINRVEFVHSKS-FLHRDIKPDNFLM 136
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 1e-10
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 20/155 (12%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVG 82
++ Y V R++G G F ++ +L + VA+K RDE K +
Sbjct: 5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-QLRDEYRTYKLLA 63
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ + + + + G H +V +++G +L L+ K +
Sbjct: 64 GCTGIPN-----------------VYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK-FSV 105
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
+ V KQ+L + +H + +++ DIKP+N L+
Sbjct: 106 KTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLI 139
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-10
Identities = 39/264 (14%), Positives = 74/264 (28%), Gaps = 73/264 (27%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
+ + KL H +W W D + +K++K +RD E L+ N
Sbjct: 13 NFLTKLNENHSGELWKGRWQGND---IVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPN 68
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNV 145
V + +L S H ++ M Y +L ++ +
Sbjct: 69 V-------------LPVLG--ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQA 113
Query: 146 RTIIKQVLEGLNYLHTQ-CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+ G+ +LHT I + +++ +D D
Sbjct: 114 VKFALDMARGMAFLHTLEPLIPRHALNSRSVM--IDEDMT-------------------- 151
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP- 263
+I+ + + + E L
Sbjct: 152 ---------------------ARISMADVKFSFQSP--GRMYAPAWVAPEALQKKPEDTN 188
Query: 264 --AADIWSTACMAFELATGDYLFD 285
+AD+WS A + +EL T + F
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFA 212
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 1e-10
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ V +K+G G+F + L +L +VA+K+ E K +G +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-PQLHLEYRFYKQLGSGDGIP 68
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ G + MV E++G +L L D ++ V I
Sbjct: 69 Q-----------------VYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT-FSLKTVLMI 110
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILM 177
Q++ + Y+H++ +I+ D+KPEN L+
Sbjct: 111 AIQLISRMEYVHSKN-LIYRDVKPENFLI 138
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 11/162 (6%)
Query: 22 IGDLFNFRYHVIRKLGWGHFSTVWL-----SWDLQDKTFVALKIVKSDQVYADTARDEIV 76
I D+ + V +G G F ++L S + +K+ SD E+
Sbjct: 29 ITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSD---NGPLFTELK 85
Query: 77 LLKAVGRKSNVHSSAYNTQASEKVIRLLNDF-KIYSRNGTHICMVFEVMGYNLLRLIARS 135
+ + + + + ++ M+ + G +L ++ +
Sbjct: 86 FYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEAN 145
Query: 136 DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
+ + V + ++L+ L Y+H +H DIK N+L+
Sbjct: 146 AKR-FSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLL 185
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 7e-10
Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 38/187 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---------KSDQVYADTARDEIVLLK 79
+ K+G G F V+ + D T VA+KI+ S Q + EI++ K
Sbjct: 21 KLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78
Query: 80 AV----GRKSNVHSSAYNTQASEKVI-----RLLNDFKIYSR--------------NGTH 116
+ G N + V LL + Y+ +
Sbjct: 79 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 138
Query: 117 ICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
I + FE G +L ++ K + ++I+ Q+ L R H D+ N+L
Sbjct: 139 IVLEFEFGGIDLEQM----RTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVL 194
Query: 177 MCVDYDK 183
+ K
Sbjct: 195 LKKTSLK 201
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 8e-10
Identities = 23/172 (13%), Positives = 57/172 (33%), Gaps = 27/172 (15%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
+ D ++ + + ++ + T + + LK
Sbjct: 34 TVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLT------------CDSGPQKQKFSLK 81
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI--------------CMVFEVMG 125
+ + + Q + K +++ K+YS I +V +G
Sbjct: 82 LDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLG 141
Query: 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177
+L + S + ++V + ++L+ L +LH +H ++ ENI +
Sbjct: 142 RSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFV 192
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 1e-09
Identities = 48/316 (15%), Positives = 95/316 (30%), Gaps = 96/316 (30%)
Query: 33 IRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
++++G G + VW+ W + VA+K+ + + + EI + R N+
Sbjct: 42 VKQIGKGRYGEVWMGKWRGEK---VAVKVFFTTEEASWFRETEIYQTVLM-RHENI---- 93
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIK 150
+ + + + T + ++ + +L + + +++ +
Sbjct: 94 ---------LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAY 141
Query: 151 QVLEGLNYLHTQCR-------IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ GL +LHT+ I H D+K +NIL V +
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL--VKKNGT------------------- 180
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-------TRQYRSVEVL 256
IADLG A + T++Y EVL
Sbjct: 181 ----------------------CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 257 IGAG------YGPAADIWSTACMAFELATGDYLFDPKAG-----KEYSRDDDHLAHIVEL 305
+ AD++S + +E+A + D + E+
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREI 278
Query: 306 VG------PIPKEVLS 315
V P S
Sbjct: 279 VCIKKLRPSFPNRWSS 294
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 2e-09
Identities = 51/271 (18%), Positives = 90/271 (33%), Gaps = 94/271 (34%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALK------IVKSDQVYADTARDEIVLLKAVGR 83
+ + LG G FSTV L+ +L A+K I+K ++V E ++ +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV--PYVTRERDVMSRLD- 88
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHI 142
H ++L F+ + + LL+ +I
Sbjct: 89 ----HPF---------FVKLYFTFQ----DDEKLYFGLSYAKNGELLK----------YI 121
Query: 143 QNVRTI--------IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
+ + + +++ L YLH + IIH D+KPENIL+ + H
Sbjct: 122 RKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILL------------NEDMH 168
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQ 249
++I D G A + T Q
Sbjct: 169 -------------------------------IQITDFGTAKVLSPESKQARANSFVGTAQ 197
Query: 250 YRSVEVLIGAGYGPAADIWSTACMAFELATG 280
Y S E+L ++D+W+ C+ ++L G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 2e-09
Identities = 56/280 (20%), Positives = 93/280 (33%), Gaps = 76/280 (27%)
Query: 9 YMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA 68
+++++ PV F R LG G F V A K ++ ++
Sbjct: 170 FLQWKWLERQPVTKNT-FRQ----YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 69 DTARDEIVLLKAVGRKSN---VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM- 124
+ K + K N V S AY + + + C+V +M
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL-----------------CLVLTLMN 267
Query: 125 GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
G +L I G ++ GL LH + RI++ D+KPENIL+
Sbjct: 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILL------- 319
Query: 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
D H ++I+DLG A + +
Sbjct: 320 -----DDHGH-------------------------------IRISDLGLAVHVPE--GQT 341
Query: 245 IQTR----QYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
I+ R Y + EV+ Y + D W+ C+ +E+ G
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 2e-09
Identities = 48/272 (17%), Positives = 85/272 (31%), Gaps = 85/272 (31%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ +G G F VW W ++ VA+KI S + + EI + R N+
Sbjct: 45 VLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQTVML-RHENI-- 98
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTI 148
+ + + T + +V + + +L + R + ++ + +
Sbjct: 99 -----------LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKL 144
Query: 149 IKQVLEGLNYLHTQ-------CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
GL +LH + I H D+K +NIL V +
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL--VKKNGT----------------- 185
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-------TRQYRSVE 254
IADLG A D T++Y + E
Sbjct: 186 ------------------------CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 255 VLIGAG------YGPAADIWSTACMAFELATG 280
VL + ADI++ + +E+A
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 5e-09
Identities = 60/295 (20%), Positives = 101/295 (34%), Gaps = 108/295 (36%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F + ++ LG G F V L + + A+KI+K + + A+DE+
Sbjct: 150 FEY----LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI---VAKDEVAHTLT----- 197
Query: 86 NVHSSAYNTQASEKVIRLLNDFK-------IYS-RNGTHICMVFE-VMGYNLLRLIARSD 136
E R+L + + YS + +C V E G L
Sbjct: 198 ------------EN--RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF------- 236
Query: 137 YKGIHIQNVRTI--------IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
H+ R +++ L+YLH++ +++ D+K EN+++
Sbjct: 237 ---FHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML----------- 282
Query: 189 RDATKHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
D H KI G+ K + +TM F C
Sbjct: 283 -DKDGHIKITDFGLCKEGIKDGATMKTF----------------------C--------- 310
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHL 299
T +Y + EVL YG A D W + +E+ G F Y++D + L
Sbjct: 311 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-------YNQDHEKL 357
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 8e-09
Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 95/269 (35%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALK------IVKSDQVYADTARDEIVLLKAVGR 83
+ I+ LG G F V L + A+K +VK Q+ + +E +L+AV
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVN- 99
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMG---YNLLRLIARSDYKG 139
+++L FK + +++ MV E V G ++ LR I R
Sbjct: 100 -------------FPFLVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFS--- 139
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ R Q++ YLH +I+ D+KPEN+L+ D +
Sbjct: 140 --EPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLI------------DQQGY----- 179
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR--------QYR 251
+++ D G FA ++ R +
Sbjct: 180 --------------------------IQVTDFG--------FAKRVKGRTWTLCGTPEAL 205
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATG 280
+ E+++ GY A D W+ + +E+A G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 1e-08
Identities = 51/321 (15%), Positives = 92/321 (28%), Gaps = 102/321 (31%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
++ +G G + VW SW ++ VA+KI S + E+ + R N+
Sbjct: 11 TLLECVGKGRYGEVWRGSWQGEN---VAVKIFSSRDEKSWFRETELYNTVML-RHENI-- 64
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG----YNLLRLIARSDYKGIHIQNV 145
+ + + T + ++ Y+ L+ + +
Sbjct: 65 -----------LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSC 107
Query: 146 RTIIKQVLEGLNYLHTQCR-------IIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
I+ + GL +LH + I H D+K +NIL+ K
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV----KK--------------- 148
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-------TRQYR 251
+ IADLG A T++Y
Sbjct: 149 ------------------------NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 252 SVEVLIGA------GYGPAADIWSTACMAFELATGDYLFDPKAG-----KEYSRDDDHLA 300
+ EVL DIW+ + +E+A + +D
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 301 HIVELVG------PIPKEVLS 315
+ ++V IP S
Sbjct: 245 DMRKVVCVDQQRPNIPNRWFS 265
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 2e-08
Identities = 25/160 (15%), Positives = 46/160 (28%), Gaps = 22/160 (13%)
Query: 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVL-LKAV 81
+ N RY ++ G W + D VAL V V D E + +
Sbjct: 26 ARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRL 85
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGI 140
R V R+L D +V E + G +L +
Sbjct: 86 SRIDKPG-----------VARVL-DV---VHTRAGGLVVAEWIRGGSLQEVADT----SP 126
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180
++ + + H + + + P + + +D
Sbjct: 127 SPVGAIRAMQSLAAAADAAH-RAGVALSIDHPSRVRVSID 165
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 43/269 (15%), Positives = 76/269 (28%), Gaps = 82/269 (30%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
LG G F + + V ++++ D+ T E+ +++ + H
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-----EH- 66
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTI 148
V++ + + + E + G L +I D + Q V
Sbjct: 67 --------PNVLKFIG----VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS-F 113
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
K + G+ YLH IIH D+ N L V +K
Sbjct: 114 AKDIASGMAYLH-SMNIIHRDLNSHNCL--VRENKN------------------------ 146
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV--------------- 253
V +AD G A + D R +
Sbjct: 147 -----------------VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 254 --EVLIGAGYGPAADIWSTACMAFELATG 280
E++ G Y D++S + E+
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGR 218
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 4e-08
Identities = 52/266 (19%), Positives = 91/266 (34%), Gaps = 80/266 (30%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALK------IVKSDQVYADTARDEIVLLKA 80
+F H R +G G F V+ A+K I A +E ++L
Sbjct: 190 DFSVH--RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE--TLALNERIMLSL 245
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKG 139
V +T ++ + F + + ++M G +L +++
Sbjct: 246 V-----------STGDCPFIVCMSYAFH----TPDKLSFILDLMNGGDLHYHLSQH--GV 288
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
++R +++ GL ++H + +++ D+KP NIL+ D H
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILL------------DEHGH----- 330
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR----QYRSVEV 255
V+I+DLG AC + Y + EV
Sbjct: 331 --------------------------VRISDLGLACDFSK---KKPHASVGTHGYMAPEV 361
Query: 256 LI-GAGYGPAADIWSTACMAFELATG 280
L G Y +AD +S CM F+L G
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRG 387
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 6e-08
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 53/136 (38%)
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
Q++ GL +LH + II+ D+KPEN+L+ D +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLL------------DDDGN---------------- 327
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR------QYRSVEVLIGAGYGPA 264
V+I+DLG A + A + +T+ + + E+L+G Y +
Sbjct: 328 ---------------VRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 265 ADIWSTACMAFELATG 280
D ++ +E+
Sbjct: 370 VDYFALGVTLYEMIAA 385
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 6e-08
Identities = 61/304 (20%), Positives = 104/304 (34%), Gaps = 100/304 (32%)
Query: 15 GGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDE 74
G P+ + D F+ +R +G G ++ V L + A+K+VK + V ++
Sbjct: 1 GAMDPLGLQD-FDL----LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV---NDDED 52
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLND---FKI---YS-RNGTHICMVFE-VMGY 126
I ++ EK + F + + + + V E V G
Sbjct: 53 IDWVQT-----------------EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 95
Query: 127 NLLRLIARSDYKGIHIQNVRTI--------IKQVLEGLNYLHTQCRIIHTDIKPENILMC 178
+L+ H+Q R + ++ LNYLH + II+ D+K +N+L+
Sbjct: 96 DLM----------FHMQRQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLL- 143
Query: 179 VDYDKVRRMARDATKHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234
D+ H K+ GM K + T S F
Sbjct: 144 -----------DSEGHIKLTDYGMCKEGLRPGDTTSTF---------------------- 170
Query: 235 CWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSR 294
C T Y + E+L G YG + D W+ + FE+ G FD +
Sbjct: 171 C----------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220
Query: 295 DDDH 298
+
Sbjct: 221 QNTE 224
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 1e-07
Identities = 42/283 (14%), Positives = 79/283 (27%), Gaps = 92/283 (32%)
Query: 33 IRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
+ +G G + V+ S D + VA+K+ I + + N+
Sbjct: 18 LELIGRGRYGAVYKGSLDERP---VAVKVFSFANRQNFINEKNIYRVPLM-EHDNI---- 69
Query: 92 YNTQASEKVIRLL-NDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTII 149
R + D ++ + +V E +L + ++ + +
Sbjct: 70 ---------ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLA 117
Query: 150 KQVLEGLNYLHT--------QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
V GL YLHT + I H D+ N+L V D
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL--VKNDG------------------ 157
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----------TRQY 250
+ I+D G + + + T +Y
Sbjct: 158 -----------------------TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 251 RSVEVLIGA-------GYGPAADIWSTACMAFELATGDYLFDP 286
+ EVL GA D+++ + +E+ P
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 59/298 (19%), Positives = 99/298 (33%), Gaps = 109/298 (36%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI--------VL 77
F+ +R +G G ++ V L + A+++VK + V ++I V
Sbjct: 54 FDL----LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELV---NDDEDIDWVQTEKHVF 106
Query: 78 LKAVGRKS----NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLI 132
+A +HS F+ + + V E V G +L+
Sbjct: 107 EQA--SNHPFLVGLHSC----------------FQ----TESRLFFVIEYVNGGDLM--- 141
Query: 133 ARSDYKGIHIQNVRTI--------IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184
H+Q R + ++ LNYLH + II+ D+K +N+L+
Sbjct: 142 -------FHMQRQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLL------- 186
Query: 185 RRMARDATKHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH 240
D+ H K+ GM K + T S F C
Sbjct: 187 -----DSEGHIKLTDYGMCKEGLRPGDTTSTF----------------------C----- 214
Query: 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDH 298
T Y + E+L G YG + D W+ + FE+ G FD + +
Sbjct: 215 -----GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE 267
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 36/138 (26%), Positives = 48/138 (34%), Gaps = 55/138 (39%)
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
+++ L+YL Q RIIH D+KP+NIL+ D H
Sbjct: 123 ELVMALDYLQNQ-RIIHRDMKPDNILL------------DEHGH---------------- 153
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVL---IGAGYG 262
V I D A + A T+ Y + E+ GAGY
Sbjct: 154 ---------------VHITDFNIAAMLPRETQITTMAG---TKPYMAPEMFSSRKGAGYS 195
Query: 263 PAADIWSTACMAFELATG 280
A D WS A+EL G
Sbjct: 196 FAVDWWSLGVTAYELLRG 213
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 2e-07
Identities = 68/472 (14%), Positives = 118/472 (25%), Gaps = 150/472 (31%)
Query: 7 ESYMEYRPGGYCPVQIGDLFNFRYHVIR-----KLGWGHFSTVWLSWDLQDKTFVAL--- 58
Y+E R Y Q+ F +Y+V R KL L +L+ V +
Sbjct: 110 RMYIEQRDRLYNDNQV---FA-KYNVSRLQPYLKL------RQALL-ELRPAKNVLIDGV 158
Query: 59 ----KIVKSDQVYADTARDEIVLLKAVGRKSNVH--SSAYNTQASEKVIRLLN------- 105
K V D V K + + + L
Sbjct: 159 LGSGKTW----VALDVCLSYKVQCKMDF---KIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG--IHIQNVRTIIKQVLEGLNYLHTQC 163
++ S + ++I + + L RL+ Y+ + + NV+ + N C
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKAWNAFNL---SC 266
Query: 164 RIIHT--DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEV 221
+I+ T + + L + HH + ++ D S
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHIS------LDHHSMT----LTPDEVKSLLLKY------ 310
Query: 222 YDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWST----ACMAFEL 277
+ + DL E+ T R + +I W C
Sbjct: 311 --LDCRPQDL----------PREVLTTNPRRLS-IIAESIRDGLATWDNWKHVNCDKLTT 357
Query: 278 ATGDYL--FDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS-------------------- 315
L +P ++ L+ IP +LS
Sbjct: 358 IIESSLNVLEPAEYRKMFDR---LSVFPPSA-HIPTILLSLIWFDVIKSDVMVVVNKLHK 413
Query: 316 -----QGKKTLRYFTPQGNF-------------RRI-------DNLKPWGL--------- 341
+ K P R I L
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF 473
Query: 342 YQVLTEKYHWSKAEASDFADFLLPMLHVN-----QKLRASA-ADCLRHPWLN 387
Y + +H E + L M+ ++ QK+R + A LN
Sbjct: 474 YSHIG--HHLKNIEHPERMT-LFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 60/295 (20%), Positives = 102/295 (34%), Gaps = 109/295 (36%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F++ ++ LG G F V L + + A+KI++ + + A+DE+
Sbjct: 7 FDY----LKLLGKGTFGKVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVT----- 54
Query: 86 NVHSSAYNTQASEKVIRLLNDFK-------IYS-RNGTHICMVFE-VMGYNLLRLIARSD 136
E R+L + + Y+ + +C V E G L
Sbjct: 55 ------------ES--RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF------- 93
Query: 137 YKGIHIQNVRTI--------IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
H+ R +++ L YLH++ +++ DIK EN+++
Sbjct: 94 ---FHLSRERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLML----------- 138
Query: 189 RDATKHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE 244
D H KI G+ K +S +TM F C
Sbjct: 139 -DKDGHIKITDFGLCKEGISDGATMKTF----------------------C--------- 166
Query: 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHL 299
T +Y + EVL YG A D W + +E+ G F Y++D + L
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-------YNQDHERL 213
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 5e-07
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 49/134 (36%)
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI---GM-KLPMSLD 206
++ L +LH + II+ D+KPENI++ + H K+ G+ K +
Sbjct: 129 EISMALGHLHQK-GIIYRDLKPENIML------------NHQGHVKLTDFGLCKESIHDG 175
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266
+ F C T +Y + E+L+ +G+ A D
Sbjct: 176 TVTHTF----------------------C----------GTIEYMAPEILMRSGHNRAVD 203
Query: 267 IWSTACMAFELATG 280
WS + +++ TG
Sbjct: 204 WWSLGALMYDMLTG 217
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 5e-07
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 49/134 (36%)
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI---GM-KLPMSLD 206
++ L++LH+ II+ D+KPENIL+ D H K+ G+ K + +
Sbjct: 134 ELALALDHLHSL-GIIYRDLKPENILL------------DEEGHIKLTDFGLSKESIDHE 180
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266
F C T +Y + EV+ G+ +AD
Sbjct: 181 KKAYSF----------------------C----------GTVEYMAPEVVNRRGHTQSAD 208
Query: 267 IWSTACMAFELATG 280
WS + FE+ TG
Sbjct: 209 WWSFGVLMFEMLTG 222
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-07
Identities = 64/307 (20%), Positives = 107/307 (34%), Gaps = 107/307 (34%)
Query: 13 RPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR 72
RP ++I D F + LG G F V+L+ + F A+K +K D V
Sbjct: 7 RPSLQIKLKIED-FIL----HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV---LMD 58
Query: 73 DEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND---FKI---YS-RNGTHICMVFE-VM 124
D++ EK + L F + + ++ V E +
Sbjct: 59 DDVECTMV-----------------EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101
Query: 125 GYNLLRLIARSDYKGIHIQNVRT--------IIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
G +L+ HIQ+ +++ GL +LH++ I++ D+K +NIL
Sbjct: 102 GGDLM----------YHIQSCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNIL 150
Query: 177 MCVDYDKVRRMARDATKHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLG 232
+ D H KI GM K M D+ + F
Sbjct: 151 L------------DKDGHIKIADFGMCKENMLGDAKTNTF-------------------- 178
Query: 233 NACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEY 292
C T Y + E+L+G Y + D WS + +E+ G F +
Sbjct: 179 --C----------GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-------H 219
Query: 293 SRDDDHL 299
+D++ L
Sbjct: 220 GQDEEEL 226
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 1e-06
Identities = 61/287 (21%), Positives = 96/287 (33%), Gaps = 92/287 (32%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
FNF + LG G F V LS A+KI+K D V D + ++ K V
Sbjct: 343 FNF----LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQN 144
+ +L + F + + V E V G +L+ HIQ
Sbjct: 399 GKPPF---------LTQLHSCF----QTMDRLYFVMEYVNGGDLM----------YHIQQ 435
Query: 145 VRT--------IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
V ++ GL +L ++ II+ D+K +N+++ D+ H K
Sbjct: 436 VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVML------------DSEGHIK 482
Query: 197 I---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRS 252
I GM K + T F C T Y +
Sbjct: 483 IADFGMCKENIWDGVTTKTF----------------------C----------GTPDYIA 510
Query: 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHL 299
E++ YG + D W+ + +E+ G F D+D L
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-------EGEDEDEL 550
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 59/296 (19%), Positives = 97/296 (32%), Gaps = 110/296 (37%)
Query: 10 MEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD 69
+ P + D F+F ++ +G G F V L+ ++ F A+K+++ +
Sbjct: 25 INLGPSSNPHAKPSD-FHF----LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAI--- 76
Query: 70 TARDEI--------VLLKAVGRKS----NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHI 117
+ E VLLK V K +H S F+ +
Sbjct: 77 LKKKEEKHIMSERNVLLKNV--KHPFLVGLHFS----------------FQ----TADKL 114
Query: 118 CMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI--------IKQVLEGLNYLHTQCRIIHT 168
V + + G L H+Q R ++ L YLH+ I++
Sbjct: 115 YFVLDYINGGELF----------YHLQRERCFLEPRARFYAAEIASALGYLHSL-NIVYR 163
Query: 169 DIKPENILMCVDYDKVRRMARDATKHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDI 224
D+KPENIL+ D+ H + G+ K + +ST S F
Sbjct: 164 DLKPENILL------------DSQGHIVLTDFGLCKENIEHNSTTSTF------------ 199
Query: 225 SVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
C T +Y + EVL Y D W + +E+ G
Sbjct: 200 ----------C----------GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 23/152 (15%)
Query: 31 HVIRKLGWGHFSTVWL-SWDL---QDKTFVALKIVKSDQVYADTA--RDEIVLLKAVGRK 84
IR LG GHF V L +D VA+K +K + A + EI +L+ +
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-- 81
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
H E +++ G I ++ E + L+ + I+++
Sbjct: 82 ---H---------ENIVKYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 127
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
Q+ +G++YL ++ + +H D+ N+L
Sbjct: 128 QLKYAVQICKGMDYLGSR-QYVHRDLAARNVL 158
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 3e-06
Identities = 52/260 (20%), Positives = 94/260 (36%), Gaps = 70/260 (26%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
Y V++ +G G F V L + A+K++ ++ R + + ++ +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM---IKRSDSAFFWE---ERDIMA 124
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
A S V++L F+ + ++ MV E + G +L+ L++ + + R
Sbjct: 125 FA----NSPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFY 173
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+V+ L+ +H IH D+KP+N+L+ D + H
Sbjct: 174 TAEVVLALDAIH-SMGFIHRDVKPDNMLL------------DKSGH-------------- 206
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ----TRQYRSVEVLIGAG---- 260
+K+AD G ++ T Y S EVL G
Sbjct: 207 -----------------LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 261 YGPAADIWSTACMAFELATG 280
YG D WS +E+ G
Sbjct: 250 YGRECDWWSVGVFLYEMLVG 269
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 4e-06
Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 57/152 (37%)
Query: 141 HIQNVRTI--------IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDAT 192
HIQ V ++ GL +L ++ II+ D+K +N+++ D+
Sbjct: 111 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVML------------DSE 157
Query: 193 KHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
H KI GM K + T F C T
Sbjct: 158 GHIKIADFGMCKENIWDGVTTKTF----------------------C----------GTP 185
Query: 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
Y + E++ YG + D W+ + +E+ G
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 40/216 (18%), Positives = 76/216 (35%), Gaps = 53/216 (24%)
Query: 115 THICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173
++ +V E +G +LL L+++ + I + R + +++ ++ +H +H DIKP+
Sbjct: 134 NYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPD 191
Query: 174 NILMCVDYDKVRRMARDATKHHKI---GMKLPMSLDSTMSDFSLLDPANEVYDISVKIAD 230
NIL+ D H ++ G L + D T+
Sbjct: 192 NILL------------DRCGHIRLADFGSCLKLRADGTVRSLV----------------- 222
Query: 231 LGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGK 290
A D+ + EI YGP D W+ A+E+ G F
Sbjct: 223 ---AVGTPDYLSPEILQAVGGGPG---TGSYGPECDWWALGVFAYEMFYGQTPF------ 270
Query: 291 EYSRDDDH-----LAHIVELVGPIPKEVLSQGKKTL 321
Y+ + + L P+ E + + +
Sbjct: 271 -YADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDF 305
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 7e-06
Identities = 37/171 (21%), Positives = 59/171 (34%), Gaps = 64/171 (37%)
Query: 141 HIQNVRTI--------IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDAT 192
HIQ R +++ L +LH + II+ D+K +N+L+ D
Sbjct: 114 HIQKSRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLL------------DHE 160
Query: 193 KHHKI---GM-KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
H K+ GM K + T + F C T
Sbjct: 161 GHCKLADFGMCKEGICNGVTTATF----------------------C----------GTP 188
Query: 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHL 299
Y + E+L YGPA D W+ + +E+ G F + ++D L
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF-------EAENEDDL 232
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 9e-06
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 33 IRKLGWGHFSTVWL-SWDL---QDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKS 85
+++LG G+F +V + +D VA+K ++ + RD EI +LK++
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--EHLRDFEREIEILKSL---- 68
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ +++ YS ++ ++ E + Y LR + + I +
Sbjct: 69 ----------QHDNIVKYKG--VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
Q+ +G+ YL T+ R IH D+ NIL
Sbjct: 117 LQYTSQICKGMEYLGTK-RYIHRDLATRNIL 146
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 33 IRKLGWGHFSTVWL-SWDL---QDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKS 85
+++LG G+F +V + +D VA+K ++ + RD EI +LK++
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSL---- 99
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ +++ YS ++ ++ E + Y LR + + I +
Sbjct: 100 ----------QHDNIVKYKG--VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 147
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
Q+ +G+ YL T+ R IH D+ NIL
Sbjct: 148 LQYTSQICKGMEYLGTK-RYIHRDLATRNIL 177
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 43/270 (15%), Positives = 82/270 (30%), Gaps = 82/270 (30%)
Query: 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSS 90
++ G F VW + +VA+KI + E+ L + + N+
Sbjct: 27 QLLEVKARGRFGCVWKAQ--LLNEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENI--- 80
Query: 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTII 149
++ + K + + ++ +L + + + I
Sbjct: 81 ----------LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIA 127
Query: 150 KQVLEGLNYLHTQC---------RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ + GL YLH I H DIK +N+L+
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL----KN----------------- 166
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVEV 255
+++ IAD G A + + TR+Y + EV
Sbjct: 167 ----------------------NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 256 LIGA-----GYGPAADIWSTACMAFELATG 280
L GA D+++ + +ELA+
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELASR 234
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 31/138 (22%), Positives = 43/138 (31%), Gaps = 60/138 (43%)
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMS 210
+V L YLH II+ D+KPENIL+ D H
Sbjct: 114 EVCLALEYLH-SKDIIYRDLKPENILL------------DKNGH---------------- 144
Query: 211 DFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR--------QYRSVEVLIGAGYG 262
+KI D G FA + Y + EV+ Y
Sbjct: 145 ---------------IKITDFG--------FAKYVPDVTYTLCGTPDYIAPEVVSTKPYN 181
Query: 263 PAADIWSTACMAFELATG 280
+ D WS + +E+ G
Sbjct: 182 KSIDWWSFGILIYEMLAG 199
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 27/151 (17%)
Query: 33 IRKLGWGHFSTVWL-SWDL---QDKTFVALKIVKSDQVYADTA--RDEIVLLKAVGRKSN 86
IR LG GHF V L +D VA+K +K+D + + EI +L+ +
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL----- 90
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNV 145
H E +I+ + +V E + +L + R I + +
Sbjct: 91 YH---------EHIIKYKG--CCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQL 136
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
+Q+ EG+ YLH Q IH D+ N+L
Sbjct: 137 LLFAQQICEGMAYLHAQ-HYIHRDLAARNVL 166
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 26/151 (17%)
Query: 33 IRKLGWGHFSTVWL-SWDL---QDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKS 85
I +LG G+F +V L +D VA+K ++ D RD EI +LKA+
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALH--- 82
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ +++ Y + +V E + LR + + +
Sbjct: 83 --S---------DFIVKYRG--VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 129
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176
Q+ +G+ YL ++ R +H D+ NIL
Sbjct: 130 LLYSSQICKGMEYLGSR-RCVHRDLAARNIL 159
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 45/253 (17%), Positives = 98/253 (38%), Gaps = 51/253 (20%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ +++ +G G F V + A+KI+ ++ R E + + +V
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM---LKRAETACFRE---ERDVLV 129
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFE-VMGYNLLRLIARSDYKGIHIQNVRTI 148
+ S+ + L F+ + ++ +V + +G +LL L+++ + + + + R
Sbjct: 130 NG----DSKWITTLHYAFQ----DDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFY 180
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ +++ ++ +H +H DIKP+NILM D H ++
Sbjct: 181 LAEMVIAIDSVHQL-HYVHRDIKPDNILM------------DMNGHIRL----------- 216
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
+DF ++ + + + A D+ + EI YGP D W
Sbjct: 217 -ADFGS---CLKLMEDGTVQSSV--AVGTPDYISPEILQAMEGG-----KGRYGPECDWW 265
Query: 269 STACMAFELATGD 281
S +E+ G+
Sbjct: 266 SLGVCMYEMLYGE 278
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 48/186 (25%)
Query: 33 IRKLGWGHFSTVWL-----SWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRK 84
+ LG G F V VA+K++K + + E+ +L +G
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHIGH- 89
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NL---LR---------- 130
H V+ LL ++ G + ++ E + NL LR
Sbjct: 90 ---H---------LNVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 131 -LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR--- 186
+ ++++ QV +G+ +L ++ + IH D+ NIL + V +
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNIL--LSEKNVVKICD 191
Query: 187 --MARD 190
+ARD
Sbjct: 192 FGLARD 197
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 9e-05
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 154 EGLNYLHTQC--RIIHTDIKPENIL 176
GL YLH C +IIH D+K NIL
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANIL 166
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
+ +KLG G F VW++ T VA+K +K + + E ++K + H
Sbjct: 192 LEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ-----H--- 242
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIK 150
+K+++L + ++ I ++ E M +LL + + + +
Sbjct: 243 ------DKLVKLHA---VVTKE--PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDATKH---HKIGMKLP 202
Q+ EG+ ++ + IH D++ NIL V V + +AR + + G K P
Sbjct: 292 QIAEGMAFIEQR-NYIHRDLRAANIL--VSASLVCKIADFGLARVIEDNEYTAREGAKFP 348
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 38/182 (20%)
Query: 31 HVIRKLGWGHFSTVWL-SWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSN 86
+++ +G G F V L + VA+K +K+D TA+ E ++ +
Sbjct: 24 KLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKND----ATAQAFLAEASVMTQLR---- 72
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNV 145
H +++LL + + +V E M +L+ + + +
Sbjct: 73 -H---------SNLVQLLG---VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 119
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDATKHHKIGMK 200
V E + YL +H D+ N+L V D V + + ++A+ K
Sbjct: 120 LKFSLDVCEAMEYLEGN-NFVHRDLAARNVL--VSEDNVAKVSDFGLTKEASSTQD-TGK 175
Query: 201 LP 202
LP
Sbjct: 176 LP 177
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 36/180 (20%), Positives = 68/180 (37%), Gaps = 36/180 (20%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKSNVH 88
+++ +G G F V L D + VA+K +K+D TA+ E ++ + H
Sbjct: 197 LLQTIGKGEFGDVMLG-DYRGNK-VAVKCIKND----ATAQAFLAEASVMTQLR-----H 245
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRT 147
+++LL + + +V E M +L+ + + +
Sbjct: 246 ---------SNLVQLLG---VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDATKHHKIGMKLP 202
V E + YL +H D+ N+L V D V + + ++A+ KLP
Sbjct: 294 FSLDVCEAMEYLEGN-NFVHRDLAARNVL--VSEDNVAKVSDFGLTKEASSTQD-TGKLP 349
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
+ KLG G F VW+ T VA+K +K + + E ++K + H
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-----H--- 238
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIK 150
EK+++L + S I +V E M +LL + K + + + +
Sbjct: 239 ------EKLVQLYA---VVSEE--PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDATKHH---KIGMKLP 202
Q+ G+ Y+ +H D++ NIL V + V + +AR + + G K P
Sbjct: 288 QIASGMAYVERM-NYVHRDLRAANIL--VGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 203 M 203
+
Sbjct: 345 I 345
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 50/209 (23%)
Query: 31 HVIRKLGWGHFSTVW---LSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGR 83
H +G GHF V+ L + K A+K + E +++K
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS- 84
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
H V+ LL I R+ +V M + LR R++ ++
Sbjct: 85 ----H---------PNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 128
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDA------T 192
++ QV +G+ YL ++ + +H D+ N + +D + +ARD +
Sbjct: 129 DLIGFGLQVAKGMKYLASK-KFVHRDLAARNCM--LDEKFTVKVADFGLARDMYDKEYYS 185
Query: 193 KHHKIGMKLP---MSLDS-------TMSD 211
H+K G KLP M+L+S T SD
Sbjct: 186 VHNKTGAKLPVKWMALESLQTQKFTTKSD 214
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 4e-04
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
+ KLG G F VW+ T VA+K +K + + E ++K + H
Sbjct: 271 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-----H--- 321
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIK 150
EK+++L + S I +V E M +LL + K + + + +
Sbjct: 322 ------EKLVQLYA---VVSEE--PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 370
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-----MARDATKHH---KIGMKLP 202
Q+ G+ Y+ +H D++ NIL V + V + +AR + + G K P
Sbjct: 371 QIASGMAYVERM-NYVHRDLRAANIL--VGENLVCKVADFGLARLIEDNEYTARQGAKFP 427
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 155 GLNYLHTQCRIIHTDIKPENIL 176
GL+YLHT+ IIH D+K NIL
Sbjct: 151 GLHYLHTRA-IIHRDVKSINIL 171
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 5e-04
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 51/188 (27%)
Query: 33 IRKLGWGHFSTVW-------LSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVG 82
+ LG G F V ++ VA+K++K +++ +D E+ ++K +G
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS-EMEMMKMIG 98
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NL---LR-------- 130
+ H + +I LL +++G + ++ E NL LR
Sbjct: 99 K----H---------KNIINLLG---ACTQDG-PLYVIVEYASKGNLREYLRARRPPGME 141
Query: 131 ---LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR- 186
I R + + +++ + Q+ G+ YL +Q + IH D+ N+L V + V +
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVL--VTENNVMKI 198
Query: 187 ----MARD 190
+ARD
Sbjct: 199 ADFGLARD 206
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 20/146 (13%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91
+ KLG G + V+ + VA+K +K D + + E ++K + H
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-----H--- 275
Query: 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIK 150
+++LL + +R ++ E M Y NLL + + + + + +
Sbjct: 276 ------PNLVQLLG---VCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 151 QVLEGLNYLHTQCRIIHTDIKPENIL 176
Q+ + YL + IH ++ N L
Sbjct: 326 QISSAMEYLEKK-NFIHRNLAARNCL 350
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 49/187 (26%)
Query: 33 IRKLGWGHFSTVWL-----SWDLQDKTFVALKIVKSDQVYADTA--RDEIVLLKAVGRKS 85
+ LG G F V VA+K++K + E+ +L +G
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-- 85
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY----NLLR----------- 130
H ++ LL + G ++ E Y N LR
Sbjct: 86 --H---------MNIVNLLG---ACTIGG-PTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 131 --LIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR-- 186
I D + ++++ + QV +G+ +L ++ IH D+ NIL + + ++ +
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNIL--LTHGRITKIC 187
Query: 187 ---MARD 190
+ARD
Sbjct: 188 DFGLARD 194
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 393 | |||
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.95 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.89 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.87 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.79 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.63 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.16 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.88 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.69 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.68 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.17 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.15 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.96 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.73 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.67 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.53 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.41 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.26 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.75 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.55 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.41 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.31 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.11 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 96.1 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.8 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.52 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.4 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 95.28 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.24 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 94.62 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 94.54 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 91.84 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 90.1 |
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-57 Score=419.31 Aligned_cols=252 Identities=24% Similarity=0.386 Sum_probs=214.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..|++.++||+|+||.||+|++..+|+.||||++... ....+.+.+|+.+|+.+ .||||++++++
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l--------------~HpnIV~l~~~ 139 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY--------------QHENVVEMYNS 139 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC--------------CCCCCCcEEEE
Confidence 5799999999999999999999999999999998743 33456788999999999 89999999999
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
|. ..+.+||||||| +|+|.+++... .+++.+++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 140 ~~----~~~~~~ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g---- 207 (346)
T 4fih_A 140 YL----VGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDG---- 207 (346)
T ss_dssp EE----ETTEEEEEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC----
T ss_pred EE----ECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCC----
Confidence 98 567899999999 78998888653 499999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||+++..... ....+||+.|||||++.+.+|+
T Consensus 208 ---------------------------------------~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~ 248 (346)
T 4fih_A 208 ---------------------------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYG 248 (346)
T ss_dssp ---------------------------------------CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred ---------------------------------------CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCC
Confidence 4999999999876432 4466899999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|||++|++||.+.+ ....+..+.....+
T Consensus 249 ~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~~---------------------------------- 288 (346)
T 4fih_A 249 PEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDNLPP---------------------------------- 288 (346)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSSCC----------------------------------
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCCC----------------------------------
Confidence 99999999999999999999997654 33333333221111
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+...++.+.+||.+||+.||++|||++|+++||||+..
T Consensus 289 -----~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 289 -----RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp -----CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred -----CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 011123567789999999999999999999999999999864
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-57 Score=414.51 Aligned_cols=250 Identities=23% Similarity=0.370 Sum_probs=215.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|++..+++.||||++.+. ....+.+.+|+.+|+.+ .||||+++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~l 97 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--------------DHPFFVKL 97 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC--------------CCTTBCCE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC--------------CCCCCCeE
Confidence 5799999999999999999999999999999999743 23346688999999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++|. +...+++||||+ +|+|.+++... +.+++.+++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 98 ~~~~~----~~~~~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g- 169 (311)
T 4aw0_A 98 YFTFQ----DDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDM- 169 (311)
T ss_dssp EEEEE----CSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTS-
T ss_pred EEEEE----eCCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCC-
Confidence 99998 677899999999 88999999775 3599999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||+|+.... .....+||+.|||||++.
T Consensus 170 ------------------------------------------~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~ 207 (311)
T 4aw0_A 170 ------------------------------------------HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207 (311)
T ss_dssp ------------------------------------------CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHH
T ss_pred ------------------------------------------CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHc
Confidence 499999999986532 233568999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+.+|+.++|||||||++|+|++|++||.+.+ ....+..+.
T Consensus 208 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~---------------------------------- 247 (311)
T 4aw0_A 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKII---------------------------------- 247 (311)
T ss_dssp HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH----------------------------------
T ss_pred CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH----------------------------------
Confidence 9999999999999999999999999997654 233333332
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHH------HhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD------CLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e------ll~hp~~~~~ 389 (393)
.....++...++++.+||++||+.||++|||++| +++||||+++
T Consensus 248 --------~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 248 --------KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp --------HTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred --------cCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 2223345566778999999999999999999988 5899999986
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-55 Score=423.03 Aligned_cols=378 Identities=58% Similarity=1.035 Sum_probs=302.3
Q ss_pred cccccccCCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcc
Q psy12288 4 DQQESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 83 (393)
+++|.+..|.+++|+|+.+|+.+.++|++.++||+|+||.||+|++..+++.||||++.......+.+.+|+.+++.+.+
T Consensus 13 ~~~e~~~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~ 92 (397)
T 1wak_A 13 DEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRN 92 (397)
T ss_dssp ---------CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhh
Confidence 56788999999999999999999999999999999999999999999999999999998766566778899999999976
Q ss_pred cCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q psy12288 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC 163 (393)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~ 163 (393)
.... +..|+|++++++.+...+..+.+.++|||++++++++.+.......+++..++.++.||+.||+|||+++
T Consensus 93 ~~~~------~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ 166 (397)
T 1wak_A 93 SDPN------DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC 166 (397)
T ss_dssp SCTT------CGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCC------CCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 5432 2368999999999987766778999999999999999988766567999999999999999999999865
Q ss_pred CeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCC-------CCCCCCCCCCCCCCcccccceEEEeecCcccc
Q psy12288 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS-------LDSTMSDFSLLDPANEVYDISVKIADLGNACW 236 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~ 236 (393)
||+||||||+|||++.++................+...+.. ....+....... ........++|+|||++..
T Consensus 167 givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~kl~DfG~a~~ 245 (397)
T 1wak_A 167 RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLE-PKNAEKLKVKIADLGNACW 245 (397)
T ss_dssp CEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTS-GGGGGGCCEEECCGGGCEE
T ss_pred CEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccc-cccccccceEecccccccc
Confidence 89999999999999988753333333222222222111110 000000001111 1111234699999999987
Q ss_pred ccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 237 IDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 237 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.........++..+....|.+|...+..
T Consensus 246 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 325 (397)
T 1wak_A 246 VHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA 325 (397)
T ss_dssp TTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred ccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhc
Confidence 77666777899999999999999999999999999999999999999998888877778889999999999999999888
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
......++...+.........++.....+.....++...+..+.+||.+||+.||.+|||++|+|+||||++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 326 GKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp CTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred ccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 888888888888888888888888889999999999999999999999999999999999999999999974
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-57 Score=407.85 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=201.1
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.|..++ +|++.+.||+|+||.||+|++..+++.||||++.+.. .....+.+|+.+++.+ .|
T Consensus 8 ~G~~ig-~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l--------------~H 72 (275)
T 3hyh_A 8 DGAHIG-NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL--------------RH 72 (275)
T ss_dssp -------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC--------------CC
T ss_pred CCCEee-CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC--------------CC
Confidence 455553 7999999999999999999999999999999987432 2345678999999999 89
Q ss_pred ccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
|||+++++++. +...+++||||++|+|.+.+... ..+++.+++.++.||+.||+|||++ ||+||||||+|||+
T Consensus 73 pnIv~~~~~~~----~~~~~~ivmEy~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl 145 (275)
T 3hyh_A 73 PHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLL 145 (275)
T ss_dssp TTBCCEEEEEE----CSSEEEEEEECCCEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEE
T ss_pred CCCCeEEEEEE----ECCEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEE
Confidence 99999999987 67789999999999999998775 4599999999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEV 255 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~ 255 (393)
+.++ .+||+|||+|+.... .....+||+.|||||+
T Consensus 146 ~~~~-------------------------------------------~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~ 182 (275)
T 3hyh_A 146 DEHL-------------------------------------------NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182 (275)
T ss_dssp CTTC-------------------------------------------CEEECCSSCC---------------CTTSCHHH
T ss_pred CCCC-------------------------------------------CEEEeecCCCeecCCCCccCCeeECcccCChhh
Confidence 8776 499999999986543 2345689999999999
Q ss_pred HhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..+ +.++|||||||++|+|++|+.||.+.+ ....+..+..
T Consensus 183 ~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~------------------------------ 226 (275)
T 3hyh_A 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISN------------------------------ 226 (275)
T ss_dssp HSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH------------------------------
T ss_pred hcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc------------------------------
Confidence 998886 689999999999999999999997644 2222222221
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....++...++.+.+||.+||+.||++|||++|+++||||+.-
T Consensus 227 ------------~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 227 ------------GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp ------------TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred ------------CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 2223345567788999999999999999999999999999754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-57 Score=422.03 Aligned_cols=254 Identities=22% Similarity=0.355 Sum_probs=210.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|+++++||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+|+.+ .||||++++
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l--------------~HpnIV~~~ 89 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM--------------KHPNIVQYR 89 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC--------------CCTTBCCEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC--------------CCCCCCcEE
Confidence 68999999999999999999999999999999987542 2346688999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++|. +++.+||||||| +|+|.+++.......+++.+++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 90 ~~~~----~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g-- 162 (350)
T 4b9d_A 90 ESFE----ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDG-- 162 (350)
T ss_dssp EEEE----ETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTC--
T ss_pred EEEE----ECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCC--
Confidence 9997 567899999999 78999999776656688999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~ 260 (393)
.+||+|||+|+..... ....+||+.|||||++.+.+
T Consensus 163 -----------------------------------------~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~ 201 (350)
T 4b9d_A 163 -----------------------------------------TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201 (350)
T ss_dssp -----------------------------------------CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC
T ss_pred -----------------------------------------CEEEcccccceeecCCcccccccCCCccccCHHHHCCCC
Confidence 4999999999866432 22357999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.++|||||||++|+|++|+.||.+.+ ....+..+.. +..|
T Consensus 202 y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~--~~~~------------------------------ 243 (350)
T 4b9d_A 202 YNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIIS--GSFP------------------------------ 243 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH--TCCC------------------------------
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHc--CCCC------------------------------
Confidence 9999999999999999999999997655 3333333322 1111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
+.+...+.++.+||.+||+.||.+|||++|+|+||||+...
T Consensus 244 ---------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 244 ---------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp ---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred ---------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 12345567889999999999999999999999999997643
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-55 Score=420.69 Aligned_cols=252 Identities=24% Similarity=0.386 Sum_probs=213.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.+|+++++||+|+||.||+|++..+|+.||||++... ....+.+.+|+.+|+.+ .|+||++++++
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l--------------~HpnIV~l~~~ 216 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY--------------QHENVVEMYNS 216 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC--------------CCCCCCceEEE
Confidence 5799999999999999999999999999999998743 33456788999999999 89999999999
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
|. .++.+||||||| +|+|.+++... .+++.+++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 217 ~~----~~~~~~iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g---- 284 (423)
T 4fie_A 217 YL----VGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDG---- 284 (423)
T ss_dssp EE----ETTEEEEEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTC----
T ss_pred EE----ECCEEEEEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCC----
Confidence 98 567899999999 78998888653 499999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||+|+..... ....+||+.|||||++.+..|+
T Consensus 285 ---------------------------------------~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~ 325 (423)
T 4fie_A 285 ---------------------------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYG 325 (423)
T ss_dssp ---------------------------------------CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBC
T ss_pred ---------------------------------------CEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCC
Confidence 4999999999866432 3456899999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|||++|++||.+.+ ....+..+.....+
T Consensus 326 ~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~~---------------------------------- 365 (423)
T 4fie_A 326 PEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDNLPP---------------------------------- 365 (423)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC----------------------------------
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCCC----------------------------------
Confidence 99999999999999999999997654 33333333221110
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+...+..+.+||.+||..||.+|||++|+|+||||+..
T Consensus 366 -----~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 366 -----RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp -----CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred -----CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 011123456788999999999999999999999999999864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-55 Score=402.50 Aligned_cols=261 Identities=25% Similarity=0.378 Sum_probs=210.2
Q ss_pred cCCeeCCeE-EEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRY-HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
+|.....+| ++.++||+|+||.||+|.+..++..||+|.+.... ...+.+.+|+.+++.+ .|
T Consensus 19 ~~~~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l--------------~H 84 (290)
T 3fpq_A 19 VGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL--------------QH 84 (290)
T ss_dssp EEECTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC--------------CC
T ss_pred cCcCCCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC--------------CC
Confidence 344444455 78889999999999999999999999999987432 2345688999999999 89
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPEN 174 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~N 174 (393)
|||++++++|.........++|||||+ +|+|.+++.+. ..+++..++.++.||+.||+|||++ + |+||||||+|
T Consensus 85 pnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~N 161 (290)
T 3fpq_A 85 PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDN 161 (290)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGG
T ss_pred CCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhh
Confidence 999999999986655677899999999 78999998775 3589999999999999999999998 8 9999999999
Q ss_pred eEEee-chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCch
Q psy12288 175 ILMCV-DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRS 252 (393)
Q Consensus 175 Il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~a 252 (393)
||++. ++ .+||+|||+|+..... ....+||+.|||
T Consensus 162 ILl~~~~g-------------------------------------------~vKl~DFGla~~~~~~~~~~~~GTp~YmA 198 (290)
T 3fpq_A 162 IFITGPTG-------------------------------------------SVKIGDLGLATLKRASFAKAVIGTPEFMA 198 (290)
T ss_dssp EEESSTTS-------------------------------------------CEEECCTTGGGGCCTTSBEESCSSCCCCC
T ss_pred eeEECCCC-------------------------------------------CEEEEeCcCCEeCCCCccCCcccCccccC
Confidence 99964 34 4999999999754432 335689999999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
||++.+ +|+.++|||||||++|+|++|+.||.+.+ ....+...+. .+..|..
T Consensus 199 PE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~------~~~~~~~~i~-~~~~~~~-------------------- 250 (290)
T 3fpq_A 199 PEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRRVT-SGVKPAS-------------------- 250 (290)
T ss_dssp GGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHHHT-TTCCCGG--------------------
T ss_pred HHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC------cHHHHHHHHH-cCCCCCC--------------------
Confidence 998865 59999999999999999999999997543 2222211111 1111111
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
++...++++.+||.+||..||.+|||++|+|+||||++
T Consensus 251 ------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 251 ------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp ------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred ------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 12334567889999999999999999999999999985
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-55 Score=416.18 Aligned_cols=288 Identities=24% Similarity=0.364 Sum_probs=227.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++++|+++++||+|+||.||+|++..+|+.||||+++.... ....+.+|+.+|+.+ .|+||++
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l--------------~HpnIv~ 117 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF--------------KHDNIIA 117 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC--------------CCTTBCC
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc--------------CCCCcce
Confidence 45789999999999999999999999999999999975432 235567899999999 8999999
Q ss_pred ccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.... .....+||||||++|+|.+.+... ..+++.+++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 118 l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~ 194 (398)
T 4b99_A 118 IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNEN 194 (398)
T ss_dssp EEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT
T ss_pred EeeeeecccccccCCEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCC
Confidence 999876432 244679999999999999998765 4599999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-------CCCCCCCCCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-------HFADEIQTRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-------~~~~~~~t~~y~aP 253 (393)
+ .+|++|||+++.+.. .....+||+.|+||
T Consensus 195 ~-------------------------------------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~AP 231 (398)
T 4b99_A 195 C-------------------------------------------ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231 (398)
T ss_dssp C-------------------------------------------CEEECCCTTCBCC-------CCCCCSSCCCCTTCCH
T ss_pred C-------------------------------------------CEEEeecceeeecccCccccccccccceeChHhcCH
Confidence 6 499999999986532 23456899999999
Q ss_pred HHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++.+.. ++.++||||+||++|+|++|++||.+.+ ..+++..+....|..+...+.......... ....
T Consensus 232 Ev~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~------~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~----~~~~ 301 (398)
T 4b99_A 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN------YVHQLQLIMMVLGTPSPAVIQAVGAERVRA----YIQS 301 (398)
T ss_dssp HHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS------HHHHHHHHHHHHCCCCGGGTC-----CHHH----HHHS
T ss_pred HHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhhhhhhhhh----hhhc
Confidence 9998864 6999999999999999999999998876 788999999999987765543211100000 0000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.+...+..... .....+..+.+||.+||+.||.+|||++|+|+||||+...
T Consensus 302 ~~~~~~~~~~~-------~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 302 LPPRQPVPWET-------VYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp SCCCCCCCHHH-------HSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred CCCcCCCCHHH-------hCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 00000000000 1123467889999999999999999999999999998753
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-55 Score=403.90 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=204.8
Q ss_pred CeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|++++.||+|+||.||+|++. .+++.||||+++... .....+.+|+.+|+.+ .||||+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l--------------~HpnIv 89 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV--------------NHPFIV 89 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC--------------CCTTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC--------------CCCCCC
Confidence 47999999999999999999885 357899999987532 2234567788888777 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++++. +.+.+++||||+ +|+|.+.+.+. ..+++.+++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 90 ~l~~~~~----~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~ 162 (304)
T 3ubd_A 90 KLHYAFQ----TEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEE 162 (304)
T ss_dssp CEEEEEE----ETTEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTT
T ss_pred eEEEEEE----ECCEEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCC
Confidence 9999998 567899999999 88999998775 3499999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~ 257 (393)
+ .+||+|||+|+.... .....+||+.|||||++.
T Consensus 163 g-------------------------------------------~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~ 199 (304)
T 3ubd_A 163 G-------------------------------------------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199 (304)
T ss_dssp S-------------------------------------------CEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHH
T ss_pred C-------------------------------------------CEEecccccceeccCCCccccccccCcccCCHHHhc
Confidence 6 499999999976432 234568999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+.+++.++|||||||++|+|++|+.||.+.+ ..+.+..+..
T Consensus 200 ~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~--------------------------------- 240 (304)
T 3ubd_A 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKD------RKETMTMILK--------------------------------- 240 (304)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH---------------------------------
T ss_pred cCCCCCCCcccchHHHHHHHHhCCCCCCCcC------HHHHHHHHHc---------------------------------
Confidence 9999999999999999999999999997655 3333333322
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....++...++++.+||++||+.||++||| ++|+++||||+++
T Consensus 241 ---------~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 241 ---------AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp ---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred ---------CCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 222344556788999999999999999998 4899999999986
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-54 Score=401.80 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=209.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
+.|++.++||+|+||.||+|++..+|+.||||+++... ...+|+.+++.+ .||||+++++++
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----~~~~E~~il~~l--------------~HpnIV~l~~~~ 119 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----FRVEELVACAGL--------------SSPRIVPLYGAV 119 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCTHHHHTTTTC--------------CCTTBCCEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----hHHHHHHHHHhC--------------CCCCCCcEEEEE
Confidence 47999999999999999999999999999999998542 235799998888 899999999998
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. ++..++|||||+ +|+|.+++... +.+++.+++.++.||+.||+|||++ ||+||||||+|||++.++.
T Consensus 120 ~----~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~---- 188 (336)
T 4g3f_A 120 R----EGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGS---- 188 (336)
T ss_dssp E----ETTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSC----
T ss_pred E----ECCEEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCC----
Confidence 7 567899999999 78999999765 3599999999999999999999998 9999999999999987652
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------CCCCCCCCCCchhHHHhc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--------FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--------~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||+|+..... ....+||+.|||||++.+
T Consensus 189 --------------------------------------~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~ 230 (336)
T 4g3f_A 189 --------------------------------------RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230 (336)
T ss_dssp --------------------------------------CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTT
T ss_pred --------------------------------------EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCC
Confidence 3999999999865422 123469999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.+|+.++|||||||++|+|++|++||.+.+.... +..+.. ++.|
T Consensus 231 ~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------~~~i~~--~~~~---------------------------- 274 (336)
T 4g3f_A 231 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL------CLKIAS--EPPP---------------------------- 274 (336)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC------HHHHHH--SCCG----------------------------
T ss_pred CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH------HHHHHc--CCCC----------------------------
Confidence 9999999999999999999999999986654321 111211 1111
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHH-------------hcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC-------------LRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el-------------l~hp~~~~~~~ 391 (393)
...++...++.+.+||.+||..||.+|||+.|+ ++|||+...++
T Consensus 275 ---------~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~ 331 (336)
T 4g3f_A 275 ---------IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE 331 (336)
T ss_dssp ---------GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred ---------chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence 112345677889999999999999999999997 67999987653
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=402.49 Aligned_cols=293 Identities=22% Similarity=0.311 Sum_probs=217.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.++||+|+||.||+|++. .+++.||||.+.... ...++.+|+.+|+.+. .|+||++
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~-------------~h~nIv~ 84 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAG-------------GQDNVMG 84 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTC-------------SBTTBCC
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhc-------------CCCCCce
Confidence 4568999999999999999999875 457889999887543 3456788999999883 6899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++++|. ..+++++||||+ +++|.+.+. .+++.+++.++.||+.||+|||++ ||+||||||+|||++.+.
T Consensus 85 l~~~~~----~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~ 154 (361)
T 4f9c_A 85 VKYCFR----KNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRL 154 (361)
T ss_dssp CSEEEE----ETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTT
T ss_pred EEEEEE----ECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCC
Confidence 999987 667899999999 788988873 389999999999999999999998 999999999999997653
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---------------------
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--------------------- 240 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--------------------- 240 (393)
. .+||+|||+|+.....
T Consensus 155 ~------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (361)
T 4f9c_A 155 K------------------------------------------KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192 (361)
T ss_dssp T------------------------------------------EEEECCCTTCEECTTCSCGGGGGC-------------
T ss_pred C------------------------------------------eEEECcCCCCcccCCcccccccccccccccccccccc
Confidence 2 5999999999754221
Q ss_pred ----------CCCCCCCCCCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCC
Q psy12288 241 ----------FADEIQTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPI 309 (393)
Q Consensus 241 ----------~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~ 309 (393)
....+||+.|+|||++.+.+ ++.++||||+||++|+|++|+.||...+. ..+++..+..+.|..
T Consensus 193 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~-----~~~~l~~I~~~~G~~ 267 (361)
T 4f9c_A 193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD-----DLTALAQIMTIRGSR 267 (361)
T ss_dssp -------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS-----HHHHHHHHHHHHCHH
T ss_pred ccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHHhcCCc
Confidence 22357999999999998864 89999999999999999999999965442 678899999988864
Q ss_pred ChHHHhcCcccccccCCCCCeee----------ccCCCcchh--HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH
Q psy12288 310 PKEVLSQGKKTLRYFTPQGNFRR----------IDNLKPWGL--YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA 377 (393)
Q Consensus 310 p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 377 (393)
+...................... .....+... ........+.....++++.|||++||+.||++|||+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta 347 (361)
T 4f9c_A 268 ETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITA 347 (361)
T ss_dssp HHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCH
T ss_pred cchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCH
Confidence 33222211111000000000000 000000000 000001112234567889999999999999999999
Q ss_pred HHHhcCCCCCCC
Q psy12288 378 ADCLRHPWLNPR 389 (393)
Q Consensus 378 ~ell~hp~~~~~ 389 (393)
+|+|+||||+++
T Consensus 348 ~eaL~Hp~f~~i 359 (361)
T 4f9c_A 348 EEALLHPFFKDM 359 (361)
T ss_dssp HHHHTSGGGTTC
T ss_pred HHHhcCcccCCC
Confidence 999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-52 Score=398.08 Aligned_cols=340 Identities=51% Similarity=0.924 Sum_probs=281.7
Q ss_pred CCCCCCccccccCCeeC-CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc
Q psy12288 11 EYRPGGYCPVQIGDLFN-FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+|+||+|+|...|+.+. .+|++.+.||+|+||.||+|.+..+++.||||++..+......+.+|+.+++.+.+......
T Consensus 1 ~y~~~~~~p~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 80 (373)
T 1q8y_A 1 DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80 (373)
T ss_dssp ------CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHH
T ss_pred CCCCCCceeeecCCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccch
Confidence 58999999999999884 69999999999999999999999999999999998766566778899999999965432111
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
....|+|++++++.+.....++.+.+++||+++++|.+++.......++...+..++.||+.||+|||+++|++|||
T Consensus 81 ---~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~D 157 (373)
T 1q8y_A 81 ---DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD 157 (373)
T ss_dssp ---HHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSC
T ss_pred ---hccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence 11248899999999987666677899999999999999998765566999999999999999999999855999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ 249 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~ 249 (393)
|||+||+++.++.. .....++|+|||++...........+|+.
T Consensus 158 ikp~NIll~~~~~~-------------------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~ 200 (373)
T 1q8y_A 158 IKPENVLMEIVDSP-------------------------------------ENLIQIKIADLGNACWYDEHYTNSIQTRE 200 (373)
T ss_dssp CSGGGEEEEEEETT-------------------------------------TTEEEEEECCCTTCEETTBCCCSCCSCGG
T ss_pred CChHHeEEeccCCC-------------------------------------cCcceEEEcccccccccCCCCCCCCCCcc
Confidence 99999999765410 01235999999999877766667789999
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|+|||++.+..++.++|||||||++|+|++|..||.+.+..........+..+....|.+|..++........+++..+.
T Consensus 201 y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 280 (373)
T 1q8y_A 201 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL 280 (373)
T ss_dssp GCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--C
T ss_pred ccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcch
Confidence 99999999999999999999999999999999999988777777788899999999999999999888877778888777
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.........+.....+.....++...+..+.+||.+||+.||.+|||++|+++||||++..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 281 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp BSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred hcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence 7777777778888888888889999999999999999999999999999999999999864
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-52 Score=382.94 Aligned_cols=253 Identities=20% Similarity=0.291 Sum_probs=195.3
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+|++++.||+|+||.||+|++..+++.||||+++... ...+.+.+|+.+|+.+ .||||+++++.
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l--------------~HpnIV~~~~~ 71 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL--------------EHPGIVRYFNA 71 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC--------------CCTTBCCEEEE
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC--------------CCCCCCeEEEE
Confidence 6999999999999999999999999999999986432 2346678999999998 89999999999
Q ss_pred ceeecC--------CCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 107 FKIYSR--------NGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 107 ~~~~~~--------~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
|...+. ...++++||||| +++|.+++..... .......++.++.||+.||+|||++ ||+||||||+|||
T Consensus 72 ~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NIL 150 (299)
T 4g31_A 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIF 150 (299)
T ss_dssp EEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEE
T ss_pred EEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeE
Confidence 875432 244689999999 8899998876432 1234556889999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---------------C
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------F 241 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------~ 241 (393)
++.++ .+||+|||+|+..... .
T Consensus 151 l~~~~-------------------------------------------~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
T 4g31_A 151 FTMDD-------------------------------------------VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187 (299)
T ss_dssp ECTTC-------------------------------------------CEEECCCCCC----------------------
T ss_pred ECCCC-------------------------------------------cEEEccCccceecCCCcccccccccccccccc
Confidence 98776 4999999999865421 1
Q ss_pred CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHh-CCCChHHHhcCccc
Q psy12288 242 ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV-GPIPKEVLSQGKKT 320 (393)
Q Consensus 242 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-g~~p~~~~~~~~~~ 320 (393)
...+||+.|||||++.+.+|+.++|||||||++|||++ ||.+ ..+....+.... +..|...
T Consensus 188 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~--------~~~~~~~~~~~~~~~~p~~~------- 249 (299)
T 4g31_A 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST--------QMERVRTLTDVRNLKFPPLF------- 249 (299)
T ss_dssp ----CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS--------HHHHHHHHHHHHTTCCCHHH-------
T ss_pred CCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC--------ccHHHHHHHHHhcCCCCCCC-------
Confidence 23479999999999999999999999999999999996 7742 222223232222 2223211
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...++.+.+||.+||+.||.+|||+.|+++||||+++
T Consensus 250 --------------------------------~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 250 --------------------------------TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp --------------------------------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred --------------------------------cccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 2334566799999999999999999999999999875
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-51 Score=406.38 Aligned_cols=259 Identities=24% Similarity=0.401 Sum_probs=216.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+-++|++.++||+|+||.||+|.+..+|+.||+|++... ....+.+.+|+.+|+.+ .||||++++
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l--------------~hpnIv~l~ 220 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL--------------RHPTLVNLH 220 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT--------------CCTTBCCEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC--------------CCCCCCeEE
Confidence 446899999999999999999999999999999988753 23356788999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.|. ....+++||||+ +|+|++++.... ..+++.+++.++.||+.||+|||++ ||+||||||+|||++.+.
T Consensus 221 ~~~~----~~~~~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~-- 292 (573)
T 3uto_A 221 DAFE----DDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKR-- 292 (573)
T ss_dssp EEEE----CSSEEEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSS--
T ss_pred EEEE----ECCEEEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCC--
Confidence 9998 778899999999 789999886543 4599999999999999999999998 999999999999997542
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
...+||+|||+++.+... ....+||+.|||||++.+.+|
T Consensus 293 ---------------------------------------~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y 333 (573)
T 3uto_A 293 ---------------------------------------SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333 (573)
T ss_dssp ---------------------------------------CCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCB
T ss_pred ---------------------------------------CCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCC
Confidence 114999999999876433 234579999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|++||.+.+ ....+..+......++...
T Consensus 334 ~~~~DiWSlGvilyeml~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~---------------------------- 379 (573)
T 3uto_A 334 GYYTDMWSVGVLSYILLSGLSPFGGEN------DDETLRNVKSCDWNMDDSA---------------------------- 379 (573)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCSGG----------------------------
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHhCCCCCCccc----------------------------
Confidence 999999999999999999999998665 4444444433222222211
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+..+.+||++||..||.+|||+.|+|+||||+..
T Consensus 380 ----------~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~ 417 (573)
T 3uto_A 380 ----------FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417 (573)
T ss_dssp ----------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred ----------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCC
Confidence 13456788999999999999999999999999999864
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=400.97 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=210.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|+++++||+|+||.||+|++..+|+.||||++.+.. .......+|..++..+.. ..||||+++
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~-----------~~HP~IV~l 257 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-----------GDCPFIVCM 257 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS-----------SCCTTBCCE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh-----------CCCCCEeEE
Confidence 47999999999999999999999999999999997532 122334455555555432 279999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++|. +...+|+||||+ ||+|...+... +.+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 258 ~~~f~----~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G- 329 (689)
T 3v5w_A 258 SYAFH----TPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHG- 329 (689)
T ss_dssp EEEEE----CSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTS-
T ss_pred EEEEE----ECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCC-
Confidence 99998 778899999999 89999999776 4599999999999999999999998 999999999999998877
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhc-CC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIG-AG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~-~~ 260 (393)
.+||+|||+|+..... ....+||+.|||||++.+ ..
T Consensus 330 ------------------------------------------~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~ 367 (689)
T 3v5w_A 330 ------------------------------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVA 367 (689)
T ss_dssp ------------------------------------------CEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCC
T ss_pred ------------------------------------------CEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCC
Confidence 4999999999876433 445689999999999975 57
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
|+.++|+|||||++|+|++|++||.+.+... ......
T Consensus 368 y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~---------------------------------------- 404 (689)
T 3v5w_A 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDR---------------------------------------- 404 (689)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHH----------------------------------------
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHH----------------------------------------
Confidence 9999999999999999999999997654321 111111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
.+......++...+..+.+||.+||+.||.+|++ ++|+++||||+++
T Consensus 405 --~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 405 --MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp --HHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred --hhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 1222233455667888999999999999999998 7999999999986
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=371.21 Aligned_cols=246 Identities=20% Similarity=0.330 Sum_probs=200.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|.+.++||+|+||.||+|++.. ++..||||+++... ...+.+.+|+.+|+.+ .||||+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l--------------~HpnIV 78 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL--------------QHEHIV 78 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC--------------CCTTBC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC--------------CCCCCc
Confidence 589999999999999999998753 57889999997532 3346688999999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhc-----------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS-----------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~-----------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
++++++. ++..++|||||+ +|+|.+++... ....+++.++..++.|++.||+|||++ +|+|||
T Consensus 79 ~l~g~~~----~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRD 153 (299)
T 4asz_A 79 KFYGVCV----EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRD 153 (299)
T ss_dssp CEEEEEC----SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSC
T ss_pred cEEEEEe----eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCc
Confidence 9999987 566799999999 89999998653 234589999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADE 244 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~ 244 (393)
|||+|||++.++ .+||+|||+++..... ....
T Consensus 154 lKp~NILl~~~~-------------------------------------------~~Ki~DFGla~~~~~~~~~~~~~~~ 190 (299)
T 4asz_A 154 LATRNCLVGENL-------------------------------------------LVKIGDFGMSRDVYSTDYYRVGGHT 190 (299)
T ss_dssp CSGGGEEECGGG-------------------------------------------CEEECCCSCHHHHTGGGCEEETTTE
T ss_pred cCHhhEEECCCC-------------------------------------------cEEECCcccceecCCCCceeecCce
Confidence 999999998877 4999999999754322 2234
Q ss_pred CCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 245 IQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 245 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
.||+.|||||++.+..++.++|||||||++|||+| |+.||.+.+ ..+.+..+.. |..
T Consensus 191 ~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~--~~~-------------- 248 (299)
T 4asz_A 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------NNEVIECITQ--GRV-------------- 248 (299)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHH--TCC--------------
T ss_pred ecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHc--CCC--------------
Confidence 58999999999999999999999999999999998 899997654 2233222221 111
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+..++..+.+||.+||+.||++|||++|+++
T Consensus 249 -------------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 249 -------------------------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp -------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 1233556778999999999999999999999853
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=383.34 Aligned_cols=308 Identities=32% Similarity=0.554 Sum_probs=250.3
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
-.++.+..+|++.++||+|+||.||+|.+..+++.||||++.........+.+|+.+++.+.+.... .|+|+
T Consensus 90 ~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~--------~~~~i 161 (429)
T 3kvw_A 90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD--------NTMNV 161 (429)
T ss_dssp CTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTT--------SCSCB
T ss_pred cCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhcccc--------CCcCE
Confidence 3567888999999999999999999999999999999999987655567788899999999765433 78899
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.+. ...++++|||+++++|.+++.......+++..++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 162 v~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~ 236 (429)
T 3kvw_A 162 IHMLENFT----FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQ 236 (429)
T ss_dssp CCEEEEEE----ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESST
T ss_pred EEEEeecc----cCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccC
Confidence 99998887 56789999999999999999887666799999999999999999999999 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCC
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
+. ..+||+|||++...........+|+.|+|||++.+..
T Consensus 237 ~~-----------------------------------------~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~ 275 (429)
T 3kvw_A 237 GR-----------------------------------------SGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGAR 275 (429)
T ss_dssp TS-----------------------------------------CCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBC
T ss_pred CC-----------------------------------------cceEEeecccceecCCcccccCCCCCccChHHHhCCC
Confidence 52 1389999999987776667778999999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC-----
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN----- 335 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 335 (393)
++.++|||||||++|+|++|.+||.+.+ ..+++..+....|..+..++........++...+.......
T Consensus 276 ~~~~~DiwSlG~il~elltG~~pf~~~~------~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (429)
T 3kvw_A 276 YGMPIDMWSLGCILAELLTGYPLLPGED------EGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSD 349 (429)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC
T ss_pred CCchHHHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccccccc
Confidence 9999999999999999999999998766 77889999999999999888777665555544332110000
Q ss_pred ------------CCc--chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 ------------LKP--WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ------------~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
... ......+. ..+....+..+.+||++||++||++|||++|+|+||||++..
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 350 GSVVLNGGRSRRGKLRGPPESREWG--NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL 416 (429)
T ss_dssp --CEECCEECTTCCEECSTTCSCHH--HHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred ccccccccccchhhccCCccchhhH--hhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence 000 00000000 012234467899999999999999999999999999999754
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=371.37 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=197.4
Q ss_pred CeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|.+.++||+|+||.||+|+.. .+++.||||+++... ...+.+.+|+.+|+.+ .||||+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l--------------~HpnIV 106 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML--------------QHQHIV 106 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC--------------CCTTBC
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC--------------CCCCCC
Confidence 57999999999999999999865 357899999997532 3356788999999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
++++++. .+..++|||||+ +|+|.+++.... ...+++.++..++.|++.||+|||++ +|+|
T Consensus 107 ~l~g~~~----~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiH 181 (329)
T 4aoj_A 107 RFFGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVH 181 (329)
T ss_dssp CEEEEEC----SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred cEEEEEE----ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-Ceec
Confidence 9999987 566799999999 899999886532 23588999999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FA 242 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~ 242 (393)
|||||+|||++.++ .+||+|||+++..... ..
T Consensus 182 RDLKp~NILl~~~~-------------------------------------------~~Ki~DFGla~~~~~~~~~~~~~ 218 (329)
T 4aoj_A 182 RDLATRNCLVGQGL-------------------------------------------VVKIGDFGMSRDIYSTDYYRVGG 218 (329)
T ss_dssp SCCCGGGEEEETTT-------------------------------------------EEEECCCC---------------
T ss_pred ccccHhhEEECCCC-------------------------------------------cEEEcccccceeccCCCcceecC
Confidence 99999999998777 5999999999865322 22
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...||+.|||||++.+..++.++|||||||++|||++ |+.||.+.+ ..+.+..+.. |.
T Consensus 219 ~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~--g~------------- 277 (329)
T 4aoj_A 219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS------NTEAIDCITQ--GR------------- 277 (329)
T ss_dssp -CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC------HHHHHHHHHH--TC-------------
T ss_pred cccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC------HHHHHHHHHc--CC-------------
Confidence 3568999999999999999999999999999999999 899997654 2233322221 11
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+..+++.+.+||.+||..||++|||++||+++
T Consensus 278 --------------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 278 --------------------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp --------------------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred --------------------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 112345567789999999999999999999999865
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-50 Score=366.81 Aligned_cols=250 Identities=20% Similarity=0.294 Sum_probs=195.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+++++.++||+|+||.||+|.+.. .||||+++... ...+.+.+|+.+++.+ .||||++++
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l--------------~HpNIV~l~ 98 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKT--------------RHVNILLFM 98 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTC--------------CCTTBCCEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhC--------------CCCCEeeEE
Confidence 578899999999999999997643 59999987432 2346688999999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+++. .+.++|||||| +|+|.+.+.... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++
T Consensus 99 g~~~-----~~~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~-- 169 (307)
T 3omv_A 99 GYMT-----KDNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGL-- 169 (307)
T ss_dssp EEEC-----SSSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTE--
T ss_pred EEEE-----CCeEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCC--
Confidence 8653 23478999999 789999886543 4599999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||+|+.... .....+||+.|||||++.+
T Consensus 170 -----------------------------------------~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~ 208 (307)
T 3omv_A 170 -----------------------------------------TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208 (307)
T ss_dssp -----------------------------------------EEEECCCSSCBC------------CCCCTTSCCHHHHHC
T ss_pred -----------------------------------------cEEEeeccCceecccCCcceeecccccCCCccCHHHhhc
Confidence 599999999976532 2334579999999999975
Q ss_pred C---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 259 A---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 ~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
. +++.++|||||||++|||++|+.||.+.+ ....+..+....-..|.
T Consensus 209 ~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~------~~~~~~~~~~~~~~~p~------------------------ 258 (307)
T 3omv_A 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN------NRDQIIFMVGRGYASPD------------------------ 258 (307)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHTTCCCCC------------------------
T ss_pred cCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcCCCCCC------------------------
Confidence 3 58999999999999999999999997655 22333322221111110
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHH------hcCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC------LRHPWL 386 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~ 386 (393)
....+..++..+.+||.+||..||++|||+.|+ |+|++-
T Consensus 259 ------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 259 ------------LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp ------------STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred ------------cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 011234567789999999999999999999876 566664
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-50 Score=368.67 Aligned_cols=247 Identities=17% Similarity=0.272 Sum_probs=201.6
Q ss_pred CeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++++.++||+|+||.||+|... .+++.||||+++... ...+.+.+|+.+++.+ .||||
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l--------------~HpNI 91 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL--------------QHPNV 91 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC--------------CCTTB
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC--------------CCCCC
Confidence 46889999999999999999864 357889999987432 2346789999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
+++++++. .+..+++||||+ +|+|.+++.... ...+++.++..++.||+.||+|||++ +|
T Consensus 92 V~l~g~~~----~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~i 166 (308)
T 4gt4_A 92 VCLLGVVT----KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HV 166 (308)
T ss_dssp CCEEEEEC----SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred CCcceEEE----ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 99999987 566789999999 889999986432 13488999999999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----C
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----H 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~ 240 (393)
+||||||+|||++.++ .+||+|||+++.... .
T Consensus 167 iHRDLK~~NILl~~~~-------------------------------------------~~Ki~DFGlar~~~~~~~~~~ 203 (308)
T 4gt4_A 167 VHKDLATRNVLVYDKL-------------------------------------------NVKISDLGLFREVYAADYYKL 203 (308)
T ss_dssp CCSCCSGGGEEECGGG-------------------------------------------CEEECCSCCBCGGGGGGCBCS
T ss_pred CCCCccccceEECCCC-------------------------------------------CEEECCcccceeccCCCceeE
Confidence 9999999999998777 499999999986532 1
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....||+.|||||++.+..++.++|||||||++|||++ |..||.+.+ ..+.+..+.. |..
T Consensus 204 ~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~------~~~~~~~i~~--~~~---------- 265 (308)
T 4gt4_A 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDVVEMIRN--RQV---------- 265 (308)
T ss_dssp SSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC------HHHHHHHHHT--TCC----------
T ss_pred ecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CCC----------
Confidence 334578999999999999999999999999999999998 899997654 2222222211 111
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.+.+..++..+.+||.+||..||++|||++||+++
T Consensus 266 -----------------------------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 266 -----------------------------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp -----------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----------------------------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 12345667789999999999999999999999876
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=370.14 Aligned_cols=330 Identities=29% Similarity=0.511 Sum_probs=245.6
Q ss_pred cccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
...|+.++++|++.++||+|+||.||+|++..+++.||||++............|+.+++.+.... ..|+|
T Consensus 27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~---------~~h~~ 97 (360)
T 3llt_A 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDD---------INNNN 97 (360)
T ss_dssp CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCS---------TTGGG
T ss_pred eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccC---------CCCCC
Confidence 467889999999999999999999999999999999999999865555667788999999985422 25999
Q ss_pred ceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
|+++++.+. .....++|||+++++|.+++.......++...++.++.||+.||+|||++ ||+||||||+|||++.
T Consensus 98 iv~~~~~~~----~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 98 IVKYHGKFM----YYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDD 172 (360)
T ss_dssp BCCEEEEEE----ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESC
T ss_pred eecccceee----ECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEcc
Confidence 999999887 45689999999999999999887666799999999999999999999998 9999999999999975
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
+..... .... ....+.. .... .......+||+|||++...........||+.|+|||++.+.
T Consensus 173 ~~~~~~--------~~~~-----~~~~~~~-~~~~----~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~ 234 (360)
T 3llt_A 173 PYFEKS--------LITV-----RRVTDGK-KIQI----YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNL 234 (360)
T ss_dssp TTCCEE--------EEEE-----ECTTTCC-EEEE----EEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTC
T ss_pred cccccc--------ccch-----hcccccc-cccc----cccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCC
Confidence 321000 0000 0000000 0000 00012359999999998776666677899999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc--ccccCCCCCeeeccCCC
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT--LRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 337 (393)
.++.++|||||||++|+|++|+.||...+ ..+.+..+....+++|.......... ..+..........+...
T Consensus 235 ~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 308 (360)
T 3llt_A 235 GWDVSSDMWSFGCVLAELYTGSLLFRTHE------HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENA 308 (360)
T ss_dssp CCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTC
T ss_pred CCCCccchHHHHHHHHHHHHCCCCCCCCc------HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccc
Confidence 99999999999999999999999998665 67888889999999998776554322 11222111111111111
Q ss_pred c-chhHHHHh-hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 338 P-WGLYQVLT-EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 338 ~-~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
. ........ ....+....+..+.+||++||+.||.+|||++|+|+||||+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 309 SSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp SCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred cchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 1 00000000 00111122347788999999999999999999999999996
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=387.14 Aligned_cols=308 Identities=28% Similarity=0.423 Sum_probs=233.1
Q ss_pred ccCCCCCCccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhc
Q psy12288 9 YMEYRPGGYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVG 82 (393)
Q Consensus 9 ~~~~~~~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~ 82 (393)
...+..+.++++.+|+ .+.++|+++++||+|+||.||+|++..+++.||||++... ......+.+|+.+++.+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l- 118 (464)
T 3ttj_A 40 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 118 (464)
T ss_dssp ------CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-
T ss_pred ccccccccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-
Confidence 3456678889999988 5678999999999999999999999999999999998753 23346677899999998
Q ss_pred ccCCCCcccccCcccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy12288 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLH 160 (393)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH 160 (393)
.|+||+++++++.... .....+++||||+++++...+.. .+++..++.++.||+.||+|||
T Consensus 119 -------------~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH 181 (464)
T 3ttj_A 119 -------------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLH 181 (464)
T ss_dssp -------------CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred -------------CCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999886432 23457899999998888888753 3889999999999999999999
Q ss_pred hcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC
Q psy12288 161 TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH 240 (393)
Q Consensus 161 ~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~ 240 (393)
++ ||+||||||+|||++.++ .+||+|||+++.....
T Consensus 182 ~~-~iiHrDlkp~NIll~~~~-------------------------------------------~~kl~DFG~a~~~~~~ 217 (464)
T 3ttj_A 182 SA-GIIHRDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTS 217 (464)
T ss_dssp HT-TCCCCCCCGGGEEECTTS-------------------------------------------CEEECCCCCC-----C
T ss_pred HC-CcccCCCChHhEEEeCCC-------------------------------------------CEEEEEEEeeeecCCC
Confidence 98 999999999999998776 4999999999866543
Q ss_pred --CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 --FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 --~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ ..+++..+....|..+.+.+....
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~------~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHcc
Confidence 345688999999999999999999999999999999999999998766 778899999999988877765543
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhh-----ccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEK-----YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+.+...... ............. .......+..+.+||++||..||.+|||++|+|+||||+..
T Consensus 292 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 292 PTVRNYVENRPK-----YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362 (464)
T ss_dssp HHHHHHHTTSCC-----CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred hhhhhHhhcccc-----cCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence 322111110000 0000000010000 00112236789999999999999999999999999999853
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-49 Score=368.30 Aligned_cols=333 Identities=26% Similarity=0.478 Sum_probs=253.1
Q ss_pred CccccccCCeeCCeEEEEEEecccCceEEEEEEe-CCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccC
Q psy12288 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWD-LQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
++.+.+.|+.+.++|++.+.||+|+||.||+|.+ ..+++.||+|+++......+.+.+|+.+++.+.+.+..
T Consensus 2 ~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~------- 74 (339)
T 1z57_A 2 MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN------- 74 (339)
T ss_dssp GGGTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTT-------
T ss_pred CceeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCC-------
Confidence 4567889999999999999999999999999998 56789999999987655567788999999999665433
Q ss_pred cccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 95 ~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.+++++++++.+. .....++|||+++++|.+.+.......++...+..++.|++.||+|||++ |++||||||+|
T Consensus 75 -~~~~i~~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~N 148 (339)
T 1z57_A 75 -STFRCVQMLEWFE----HHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPEN 148 (339)
T ss_dssp -CTTCBCCEEEEEE----ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGG
T ss_pred -CceeeEeeecccc----cCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHH
Confidence 5567888888776 56689999999999999999877655689999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhH
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE 254 (393)
|+++.++... .... .............++|+|||++...........+|+.|+|||
T Consensus 149 il~~~~~~~~---------------~~~~---------~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE 204 (339)
T 1z57_A 149 ILFVQSDYTE---------------AYNP---------KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPE 204 (339)
T ss_dssp EEESCCCEEE---------------EEC-------------CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHH
T ss_pred EEEecccccc---------------ccCC---------ccccccccccCCCceEeeCcccccCccccccccCCccccChH
Confidence 9997543100 0000 000000001123599999999987766666778999999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++|||||||++|+|++|..||...+ ....+..+....++.|............+...........
T Consensus 205 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (339)
T 1z57_A 205 VILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD------SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHS 278 (339)
T ss_dssp HHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC------HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTS
T ss_pred HhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccc
Confidence 9999899999999999999999999999998655 6777888889999999988776554332221111100000
Q ss_pred CCCcchhHH---HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCC
Q psy12288 335 NLKPWGLYQ---VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392 (393)
Q Consensus 335 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 392 (393)
... ..... .+..........+..+.+||.+||..||.+|||++|+++||||+.+++.
T Consensus 279 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 338 (339)
T 1z57_A 279 SAG-RYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338 (339)
T ss_dssp HHH-HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC-
T ss_pred ccc-chhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhcc
Confidence 000 00000 0111222345678899999999999999999999999999999987653
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=367.56 Aligned_cols=334 Identities=26% Similarity=0.443 Sum_probs=253.6
Q ss_pred CCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCC-ceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccc
Q psy12288 13 RPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDK-TFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91 (393)
Q Consensus 13 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~ 91 (393)
.++++.++.+|+++.++|++.+.||+|+||.||+|.+..++ +.||+|+++......+.+.+|+.+++.+.+.+..
T Consensus 4 ~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~---- 79 (355)
T 2eu9_A 4 DKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE---- 79 (355)
T ss_dssp CTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTT----
T ss_pred ccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCC----
Confidence 57889999999999999999999999999999999998876 6899999987655567788999999999665432
Q ss_pred ccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.+.+++.+.+.+. .....++|||++++++++.+.......+++..+..++.||+.||+|||++ |++|||||
T Consensus 80 ----~~~~~~~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlk 150 (355)
T 2eu9_A 80 ----NKFLCVLMSDWFN----FHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLK 150 (355)
T ss_dssp ----SCSCBCCEEEEEE----ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCC
T ss_pred ----CceeEEEeeeeee----eCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCC
Confidence 3444667766665 45689999999999999998876656699999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCc
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYR 251 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~ 251 (393)
|+||+++.++... .. ...............++|+|||++...........||+.|+
T Consensus 151 p~NIll~~~~~~~---------~~---------------~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~ 206 (355)
T 2eu9_A 151 PENILFVNSEFET---------LY---------------NEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYR 206 (355)
T ss_dssp GGGEEESCCCEEE---------EE---------------CCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGC
T ss_pred HHHEEEecccccc---------cc---------------cccccccccccCCCcEEEeecCccccccccccCCcCCCccc
Confidence 9999995432100 00 00000000011133599999999987766666778999999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++.+..++.++|||||||++|+|++|..||...+ ....+..+....+++|............++.......
T Consensus 207 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (355)
T 2eu9_A 207 PPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE------NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 280 (355)
T ss_dssp CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCC
T ss_pred CCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccc
Confidence 9999999999999999999999999999999998655 6677888889999999988876654433322211110
Q ss_pred eccCCCcchhHHH---HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 332 RIDNLKPWGLYQV---LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 332 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..... ....... ...........+..+.+||.+||..||.+|||+.|+++||||+++.
T Consensus 281 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 281 ENSSD-GRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341 (355)
T ss_dssp TTSHH-HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred cccch-hccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence 00000 0000000 0111122345678899999999999999999999999999999764
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-48 Score=371.87 Aligned_cols=321 Identities=30% Similarity=0.551 Sum_probs=250.0
Q ss_pred CCCCCCc-cccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc
Q psy12288 11 EYRPGGY-CPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 11 ~~~~~~~-~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
.|....+ .++..|+.+.++|++.+.||+|+||.||+|.+..+++.||||+++...........|+.+++.+.+.+..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~-- 113 (382)
T 2vx3_A 36 GYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE-- 113 (382)
T ss_dssp GTBCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSG--
T ss_pred CcCCCCCcEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccc--
Confidence 3444444 6789999999999999999999999999999999999999999986655566778899999998655433
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeec
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHT 168 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~ 168 (393)
.+++++++.+.+. .....++|||+++++|.+.+.......++...++.++.|++.||+|||. ..||+||
T Consensus 114 ------~~~~iv~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHr 183 (382)
T 2vx3_A 114 ------MKYYIVHLKRHFM----FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHC 183 (382)
T ss_dssp ------GGGGBCCEEEEEE----ETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECC
T ss_pred ------cceeEEEeeeeec----cCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcC
Confidence 4567888888776 4568999999999899999987765669999999999999999999994 2399999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~ 248 (393)
||||+|||++.+. ...+||+|||++...........+|+
T Consensus 184 Dlkp~NIll~~~~-----------------------------------------~~~~kL~DFG~a~~~~~~~~~~~~t~ 222 (382)
T 2vx3_A 184 DLKPENILLCNPK-----------------------------------------RSAIKIVDFGSSCQLGQRIYQYIQSR 222 (382)
T ss_dssp CCSGGGEEESSTT-----------------------------------------SCCEEECCCTTCEETTCCCCSSCSCG
T ss_pred CCCcccEEEecCC-----------------------------------------CCcEEEEeccCceecccccccccCCc
Confidence 9999999996432 11499999999988776667778999
Q ss_pred CCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC-
Q psy12288 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ- 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~- 327 (393)
.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ ..+.+..+....+..|............++..-
T Consensus 223 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (382)
T 2vx3_A 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN------EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLP 296 (382)
T ss_dssp GGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECT
T ss_pred cccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcc
Confidence 9999999999999999999999999999999999998765 678888899999998887776543332222111
Q ss_pred ---CCeee-------ccCCCcchhHHHHh-----------hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 328 ---GNFRR-------IDNLKPWGLYQVLT-----------EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 328 ---~~~~~-------~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
+.... ............+. ........++..+.+||++||+.||++|||++|+|+||||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f 376 (382)
T 2vx3_A 297 DGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376 (382)
T ss_dssp TSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred ccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccc
Confidence 00000 00000011111111 0111223455789999999999999999999999999999
Q ss_pred CCCC
Q psy12288 387 NPRR 390 (393)
Q Consensus 387 ~~~~ 390 (393)
++..
T Consensus 377 ~~~~ 380 (382)
T 2vx3_A 377 KKTA 380 (382)
T ss_dssp CC--
T ss_pred ccCC
Confidence 8754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-48 Score=359.62 Aligned_cols=296 Identities=27% Similarity=0.411 Sum_probs=224.7
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
-+++.+...++.+.++|++.++||+|+||.||+|.+. +++.||+|++..... ....+.+|+.+++.+
T Consensus 7 ~~~~~~~~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------- 76 (311)
T 3niz_A 7 HSSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL--------- 76 (311)
T ss_dssp --------CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHC---------
T ss_pred ccccccceeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHc---------
Confidence 3456666778889999999999999999999999985 588999999874432 235678899999999
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
.|+||+++++.+. .....++||||+++++.+.+.... ..+++..+..++.|++.||+|||++ |++||||
T Consensus 77 -----~hp~iv~~~~~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Di 145 (311)
T 3niz_A 77 -----HHPNIVSLIDVIH----SERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDL 145 (311)
T ss_dssp -----CCTTBCCEEEEEC----CSSCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCC
T ss_pred -----CCCCEeeeeeEEc----cCCEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCC
Confidence 7999999999887 667899999999889999887654 4589999999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQT 247 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t 247 (393)
||+||+++.++ .+||+|||++..... ......+|
T Consensus 146 kp~NIl~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~t 182 (311)
T 3niz_A 146 KPQNLLINSDG-------------------------------------------ALKLADFGLARAFGIPVRSYTHEVVT 182 (311)
T ss_dssp CGGGEEECTTC-------------------------------------------CEEECCCTTCEETTSCCC---CCCCC
T ss_pred chHhEEECCCC-------------------------------------------CEEEccCcCceecCCCcccccCCccc
Confidence 99999998766 499999999986542 23345789
Q ss_pred CCCchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 248 RQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 248 ~~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+ ..+.+..+....+..+...+........+...
T Consensus 183 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT------DDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp CTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS------TTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred CCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 99999999987 457999999999999999999999998766 45667778887776555433222111100000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.. .... ... ........+.++.+||++||+.||.+|||++|+++||||+++..
T Consensus 257 ~~--~~~~-~~~---------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 257 TF--QVFE-KKP---------WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP 309 (311)
T ss_dssp CC--CCCC-CCC---------HHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred cc--cccc-CCc---------HHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence 00 0000 000 00112345678899999999999999999999999999998753
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-48 Score=357.43 Aligned_cols=294 Identities=28% Similarity=0.442 Sum_probs=225.2
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccC
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
.+|+.+.++|++.++||+|+||.||+|++..+++.||+|++.... .......+|+.+++.+...
T Consensus 2 p~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---------- 71 (308)
T 3g33_A 2 PLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF---------- 71 (308)
T ss_dssp --------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH----------
T ss_pred CCCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc----------
Confidence 378899999999999999999999999999999999999987422 2234677888888887321
Q ss_pred cccccceeccccceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 95 QASEKVIRLLNDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 95 ~~~~~i~~~~~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+|++++++.+..... .....+++||+++++|.+++.......+++..+..++.|++.||+|||++ |++||||||+
T Consensus 72 -~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~ 149 (308)
T 3g33_A 72 -EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPE 149 (308)
T ss_dssp -CCTTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTT
T ss_pred -CCCCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHH
Confidence 49999999998875432 23368999999999999999877656699999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCc
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYR 251 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~ 251 (393)
||+++.++ .++|+|||++...... .....+|+.|+
T Consensus 150 Nil~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~ 186 (308)
T 3g33_A 150 NILVTSGG-------------------------------------------TVKLADFGLARIYSYQMALTPVVVTLWYR 186 (308)
T ss_dssp TEEECTTS-------------------------------------------CEEECSCSCTTTSTTCCCSGGGGCCCSSC
T ss_pred HEEEcCCC-------------------------------------------CEEEeeCccccccCCCcccCCcccccccc
Confidence 99997766 4999999998765432 33457899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++.+..++.++|||||||++|+|++|+.||.+.+ ....+..+....+..+...+.......+....
T Consensus 187 aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----- 255 (308)
T 3g33_A 187 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS------EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFP----- 255 (308)
T ss_dssp CHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSC-----
T ss_pred CchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhccchhhccccccC-----
Confidence 9999999999999999999999999999999998766 77788888888888776544332221111000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+.... ......+..+.+||.+||..||.+|||+.|+|+||||++..
T Consensus 256 ---~~~~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 256 ---PRGPRPVQ-------SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp ---CCCCCCHH-------HHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred ---CCCCCcHH-------HhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 00011100 11234567889999999999999999999999999998754
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=365.71 Aligned_cols=251 Identities=20% Similarity=0.276 Sum_probs=201.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.+..+ ++.||||.++.... ....+.+|+.+|+.+. .|+|
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~-------------hhpn 129 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-------------HHLN 129 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-------------CCTT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcC-------------CCCc
Confidence 36899999999999999999987654 35799999875432 2456789999999993 3489
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
|+++++++.. .+..++|||||| +|+|.+++.... ...+++..+..++.||+.||+|||++ +
T Consensus 130 IV~l~g~~~~---~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~ 205 (353)
T 4ase_A 130 VVNLLGACTK---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-K 205 (353)
T ss_dssp BCCEEEEECC---TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred EEEEEEEEEe---cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-C
Confidence 9999998751 345689999999 899999986532 23478999999999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---- 240 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---- 240 (393)
|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 206 iiHRDLK~~NILl~~~~-------------------------------------------~vKi~DFGlar~~~~~~~~~ 242 (353)
T 4ase_A 206 CIHRDLAARNILLSEKN-------------------------------------------VVKICDFGLARDIYKDPDYV 242 (353)
T ss_dssp CCCSCCSGGGEEECGGG-------------------------------------------CEEECCCGGGSCTTTCTTSE
T ss_pred eecCccCccceeeCCCC-------------------------------------------CEEECcchhhhhcccCCCce
Confidence 99999999999998877 4999999999865332
Q ss_pred -CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 -FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
.....||+.|||||++.+..|+.++|||||||++|||++ |+.||.+.+. ...+...... |.
T Consensus 243 ~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~------~~~~~~~i~~-g~---------- 305 (353)
T 4ase_A 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI------DEEFCRRLKE-GT---------- 305 (353)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC------SHHHHHHHHH-TC----------
T ss_pred eeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH------HHHHHHHHHc-CC----------
Confidence 223467999999999999999999999999999999998 9999976542 1222222111 11
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+..+++.+.++|.+||+.||++|||+.||++|
T Consensus 306 -----------------------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 306 -----------------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp -----------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----------------------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 112345567789999999999999999999999987
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=358.42 Aligned_cols=263 Identities=27% Similarity=0.450 Sum_probs=216.5
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
...+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.+
T Consensus 7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-------------- 72 (361)
T 2yab_A 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-------------- 72 (361)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC--------------
T ss_pred CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC--------------
Confidence 34567799999999999999999999999999999999875432 235678999999998
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.|+||+++++.+. ....+++||||+ +++|.+.+... ..+++..+..++.||+.||.|||++ |++||||||+|
T Consensus 73 ~hpnIv~l~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~N 145 (361)
T 2yab_A 73 LHPNIITLHDVYE----NRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPEN 145 (361)
T ss_dssp CCTTBCCEEEEEE----CSSEEEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGG
T ss_pred CCcCCCcEEEEEE----eCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHH
Confidence 7999999999887 677899999999 88999988654 4589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCch
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRS 252 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~a 252 (393)
|+++.++.. ...++|+|||++..... ......||+.|+|
T Consensus 146 Ill~~~~~~---------------------------------------~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~a 186 (361)
T 2yab_A 146 IMLLDKNIP---------------------------------------IPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186 (361)
T ss_dssp EEESCTTSS---------------------------------------SCCEEECCCSSCEECCTTCCCCCCCSCGGGCC
T ss_pred EEEeCCCCC---------------------------------------ccCEEEEecCCceEcCCCCccccCCCCccEEC
Confidence 999765410 11499999999986543 2345679999999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
||++.+..++.++|||||||++|+|++|..||.+.+ ....+..+......++...+
T Consensus 187 PE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~------------------ 242 (361)
T 2yab_A 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITAVSYDFDEEFF------------------ 242 (361)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCHHHH------------------
T ss_pred chHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcCCCCCchhc------------------
Confidence 999999899999999999999999999999997654 33344443332222222211
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+..+.+||++||..||.+|||+.|+++||||++.
T Consensus 243 --------------------~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 243 --------------------SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp --------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred --------------------cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 2346778899999999999999999999999999864
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-47 Score=348.08 Aligned_cols=282 Identities=27% Similarity=0.431 Sum_probs=222.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.++||+|+||.||+|.+..+++.||+|++...... ...+.+|+.+++.+ .|+|+++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 67 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL--------------KHKNIVRLH 67 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC--------------CCTTBCCEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC--------------CCCCEeeEE
Confidence 4799999999999999999999999999999998754322 35567899888888 799999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++||||+++++...+.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 68 ~~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~--- 138 (292)
T 3o0g_A 68 DVLH----SDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNG--- 138 (292)
T ss_dssp EEEE----ETTEEEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTS---
T ss_pred eEEE----eCCEEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCC---
Confidence 9887 567899999999889988887643 4599999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~- 260 (393)
.+||+|||++...... .....+|+.|+|||++.+..
T Consensus 139 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 178 (292)
T 3o0g_A 139 ----------------------------------------ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178 (292)
T ss_dssp ----------------------------------------CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSC
T ss_pred ----------------------------------------CEEEeecccceecCCccccccCCccccCCcChHHHcCCCC
Confidence 4999999999765432 33457899999999998876
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|||||||++|+|++|..||.... ...+.+..+....+..+...+....+...+... ....
T Consensus 179 ~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------- 243 (292)
T 3o0g_A 179 YSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY-PMYP--------- 243 (292)
T ss_dssp CCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC-CCCC---------
T ss_pred cCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhhhhccccccccc-cccc---------
Confidence 7999999999999999999877754322 266778888888887766554433222111100 0000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
............+..+.+||++||+.||++|||++|+++||||++..
T Consensus 244 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 244 ---ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp ---TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred ---CCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence 00011112245667889999999999999999999999999999864
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-47 Score=351.97 Aligned_cols=271 Identities=24% Similarity=0.309 Sum_probs=217.0
Q ss_pred cccccCCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc---hhhHHHHHHHHHhc
Q psy12288 6 QESYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---DTARDEIVLLKAVG 82 (393)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~E~~~l~~l~ 82 (393)
++..+.|.+.+|.|..+++.+.++|++.++||+|+||.||+|.+..+++.||||++....... .....|+..+..+
T Consensus 35 ~~~~~~~~~~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~- 113 (311)
T 3p1a_A 35 GEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV- 113 (311)
T ss_dssp CCSCSSCCCTTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHH-
T ss_pred CCCCcccCCCCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHh-
Confidence 456677999999999999999999999999999999999999999999999999886532222 2233444444443
Q ss_pred ccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
..|+|++++++.+. .+...++|||+++++|.+.+.... ..+++..+..++.|++.||+|||++
T Consensus 114 ------------~~h~~iv~l~~~~~----~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~ 176 (311)
T 3p1a_A 114 ------------GQHPCCVRLEQAWE----EGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ 176 (311)
T ss_dssp ------------CCCTTBCCEEEEEE----ETTEEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------cCCCcEEEEEEEEE----eCCEEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 17899999999887 567899999999999999887654 4599999999999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
+++||||||+|||++.++ .+||+|||++......
T Consensus 177 -~ivH~Dikp~NIll~~~~-------------------------------------------~~kl~DFG~a~~~~~~~~ 212 (311)
T 3p1a_A 177 -GLVHLDVKPANIFLGPRG-------------------------------------------RCKLGDFGLLVELGTAGA 212 (311)
T ss_dssp -TEECCCCSGGGEEECGGG-------------------------------------------CEEECCCTTCEECC----
T ss_pred -CEecCCCCHHHEEECCCC-------------------------------------------CEEEccceeeeecccCCC
Confidence 999999999999998776 4999999998765432
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+ ..+..+...
T Consensus 213 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---------~~~~~--~~~~~~~~~------- 273 (311)
T 3p1a_A 213 GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---------GWQQL--RQGYLPPEF------- 273 (311)
T ss_dssp --CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---------HHHHH--TTTCCCHHH-------
T ss_pred CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HHHHH--hccCCCccc-------
Confidence 234468999999999876 68999999999999999999976664211 11111 111111111
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+...+..+.+||.+||..||++|||++|+++||||++
T Consensus 274 -------------------------------~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 274 -------------------------------TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp -------------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred -------------------------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 1345678899999999999999999999999999975
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-47 Score=364.14 Aligned_cols=301 Identities=25% Similarity=0.420 Sum_probs=220.2
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
++..+.++|++.++||+|+||.||+|.+..+++.||||++... ........+|+.+++.+. .|+
T Consensus 3 v~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~ 69 (388)
T 3oz6_A 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS-------------GHE 69 (388)
T ss_dssp -CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTT-------------TCT
T ss_pred ccCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhcc-------------CCC
Confidence 5566778999999999999999999999999999999988643 233455678999999882 499
Q ss_pred cceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
||+++++.+.. .+...+++||||++++|...+... .++...+..++.|++.||+|||+. ||+||||||+|||++
T Consensus 70 niv~l~~~~~~--~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~ 143 (388)
T 3oz6_A 70 NIVNLLNVLRA--DNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLN 143 (388)
T ss_dssp TBCCEEEEEEC--TTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEC
T ss_pred CCCeeeeEEec--CCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEc
Confidence 99999998863 244578999999999999888763 488999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-------------------
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------------------- 239 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------------------- 239 (393)
.++ .+||+|||+++....
T Consensus 144 ~~~-------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 180 (388)
T 3oz6_A 144 AEC-------------------------------------------HVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180 (388)
T ss_dssp TTC-------------------------------------------CEEECCCTTCEESSSCCCCCCCGGGCCC------
T ss_pred CCC-------------------------------------------CEEecCCccccccccccccccccccccccccccc
Confidence 776 499999999875421
Q ss_pred -----CCCCCCCCCCCchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHH
Q psy12288 240 -----HFADEIQTRQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313 (393)
Q Consensus 240 -----~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~ 313 (393)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+ ...++..+....|..+.+.
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~p~~~~ 254 (388)
T 3oz6_A 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS------TMNQLERIIGVIDFPSNED 254 (388)
T ss_dssp ---------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHH
T ss_pred ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHH
Confidence 1233578999999999987 568999999999999999999999998766 7788889999888877766
Q ss_pred HhcCccccc--ccCCC---CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 314 LSQGKKTLR--YFTPQ---GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 314 ~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
+........ +.... ............................+..+.+||++||+.||.+|||++|+++||||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 255 VESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp HHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred HHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence 543221100 00000 0000000000000001111111122345678999999999999999999999999999987
Q ss_pred CC
Q psy12288 389 RR 390 (393)
Q Consensus 389 ~~ 390 (393)
..
T Consensus 335 ~~ 336 (388)
T 3oz6_A 335 FH 336 (388)
T ss_dssp TC
T ss_pred hc
Confidence 54
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=354.91 Aligned_cols=262 Identities=20% Similarity=0.194 Sum_probs=189.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
|..+|.+.++||+|+||.||+|.+ +|+.||||++............|+..+..+ .||||+++++
T Consensus 1 Iar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l--------------~HpNIv~l~g 64 (303)
T 3hmm_A 1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVML--------------RHENILGFIA 64 (303)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTC--------------CCTTBCCEEE
T ss_pred CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcC--------------CCCCCCcEEE
Confidence 356899999999999999999987 588999999875432222222333333344 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------CeeeccCCCCceEE
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC-------RIIHTDIKPENILM 177 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~-------~i~H~dlkp~NIl~ 177 (393)
.+...+.....++|||||+ +|+|.+++... .++++.+.+++.|++.||+|||+++ +|+||||||+|||+
T Consensus 65 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl 141 (303)
T 3hmm_A 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 141 (303)
T ss_dssp EEEEECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE
T ss_pred EEEecCCCceEEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE
Confidence 9886554556799999999 78999998764 4899999999999999999999642 89999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCC
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQY 250 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y 250 (393)
+.++ .+||+|||+++..... ....+||+.|
T Consensus 142 ~~~~-------------------------------------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~y 178 (303)
T 3hmm_A 142 KKNG-------------------------------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178 (303)
T ss_dssp CTTS-------------------------------------------CEEECCCTTCEEEETTTTEESCC-----CCGGG
T ss_pred CCCC-------------------------------------------CEEEEeCCCCccccCCCCceeeecccccccccc
Confidence 8877 4999999998765322 1234799999
Q ss_pred chhHHHhcC------CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCC--------CcHHHHHHHHHHhCCCChHHHhc
Q psy12288 251 RSVEVLIGA------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYS--------RDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 251 ~aPE~~~~~------~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~--------~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
||||++.+. .++.++|||||||++|||++|.+||......... .....+.......+..|.
T Consensus 179 mAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~----- 253 (303)
T 3hmm_A 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN----- 253 (303)
T ss_dssp CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC-----
T ss_pred cCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCC-----
Confidence 999999865 3577999999999999999998887544322110 001111111000000000
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.+ . ...+.+....+.+||.+||..||++|||+.|+++.
T Consensus 254 --------------------~p--------~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 254 --------------------IP--------N-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp --------------------CC--------G-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred --------------------CC--------c-cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 00 0 00112456678899999999999999999999864
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=351.81 Aligned_cols=252 Identities=22% Similarity=0.435 Sum_probs=210.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..+|++.+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+ .|+||+++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpnIv~l 79 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL--------------NHPNIVKL 79 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC--------------CCTTBCCE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 357999999999999999999999999999999987543 2345677899999999 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .....++||||+ +++|.+.+... ..+++.++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 80 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~- 151 (328)
T 3fe3_A 80 FEVIE----TEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADM- 151 (328)
T ss_dssp EEEEE----CSSEEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTS-
T ss_pred EEEEE----ECCEEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCC-
Confidence 99887 667899999999 78999988765 3489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.+||+|||++..... .....+||+.|+|||++.+..
T Consensus 152 ------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 189 (328)
T 3fe3_A 152 ------------------------------------------NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189 (328)
T ss_dssp ------------------------------------------CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCC
T ss_pred ------------------------------------------CEEEeeccCceecCCCCccccccCCcceeCcccccCCC
Confidence 499999999875532 334567899999999999887
Q ss_pred C-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 Y-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
+ +.++|||||||++|+|++|+.||.+.+ .......+.
T Consensus 190 ~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~------------------------------------ 227 (328)
T 3fe3_A 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVL------------------------------------ 227 (328)
T ss_dssp CCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH------------------------------------
T ss_pred cCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHH------------------------------------
Confidence 6 479999999999999999999997654 222222221
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....++...+..+.+||++||..||.+|||++|+++||||+...
T Consensus 228 ------~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 228 ------RGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp ------HCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred ------hCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 122223344567888999999999999999999999999998754
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=350.80 Aligned_cols=289 Identities=31% Similarity=0.540 Sum_probs=215.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.+ .|+||+++++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~~~ 70 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL--------------KHENIVRLYD 70 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC--------------CBTTBCCEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc--------------CCCCcceEEE
Confidence 58999999999999999999999999999999987543 2346678899999988 7999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSD----YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~----~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
.+. .....++||||+.++|.+++.... ...++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~ 145 (317)
T 2pmi_A 71 VIH----TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRG 145 (317)
T ss_dssp EEC----CTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTC
T ss_pred EEE----ECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCC
Confidence 887 567899999999889998886532 23488999999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++...... .....+|+.|+|||++.+
T Consensus 146 -------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 182 (317)
T 2pmi_A 146 -------------------------------------------QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182 (317)
T ss_dssp -------------------------------------------CEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTT
T ss_pred -------------------------------------------CEEECcCccceecCCCcccCCCCcccccccCchHhhC
Confidence 4999999998865432 334578999999999987
Q ss_pred C-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 A-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
. .++.++|||||||++|+|++|+.||.+.+ ....+..+....|..+...+....+...+ ... .....
T Consensus 183 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~ 250 (317)
T 2pmi_A 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTN------DEEQLKLIFDIMGTPNESLWPSVTKLPKY-NPN-----IQQRP 250 (317)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCTTTCGGGGGCTTC-CTT-----CCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChhHhhhhhhhhhc-ccc-----ccccc
Confidence 4 58999999999999999999999998765 67778888888887766554433322211 110 01111
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRSH 392 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 392 (393)
.......+... .....+..+.+||.+||..||.+|||++|+++||||++...+
T Consensus 251 ~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 251 PRDLRQVLQPH--TKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp CCCSHHHHGGG--CSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred chhHHHhhccc--ccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 11112222211 123456789999999999999999999999999999986543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=363.84 Aligned_cols=305 Identities=29% Similarity=0.450 Sum_probs=226.2
Q ss_pred CCCCCccccccCC---eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccC
Q psy12288 12 YRPGGYCPVQIGD---LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 12 ~~~~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~ 85 (393)
++++++.++.+|+ .+.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---- 81 (371)
T 2xrw_A 6 KRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV---- 81 (371)
T ss_dssp GGGGGEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC----
T ss_pred cccCcceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc----
Confidence 5567888999998 45789999999999999999999999999999999987532 2235677899999998
Q ss_pred CCCcccccCcccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC 163 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~ 163 (393)
.|+|++++++.+.... ......++||||+++++.+.+.. .++...+..++.|++.||+|||++
T Consensus 82 ----------~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~- 146 (371)
T 2xrw_A 82 ----------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA- 146 (371)
T ss_dssp ----------CCTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ----------CCCCccceEEeeccccccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC-
Confidence 8999999999886332 12347899999999899888753 388999999999999999999998
Q ss_pred CeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--C
Q psy12288 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--F 241 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~ 241 (393)
|++||||||+||+++.++ .+||+|||++...... .
T Consensus 147 ~ivH~Dlkp~NIl~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~ 183 (371)
T 2xrw_A 147 GIIHRDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMM 183 (371)
T ss_dssp TCCCSCCCGGGEEECTTS-------------------------------------------CEEECCCCC----------
T ss_pred CeecccCCHHHEEEcCCC-------------------------------------------CEEEEEeeccccccccccc
Confidence 999999999999998766 4999999999865433 3
Q ss_pred CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 242 ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 242 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+ ....+..+....|..+.+.........
T Consensus 184 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD------HIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 34578999999999999999999999999999999999999998765 566777777777776665554332211
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhh-----ccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEK-----YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+.... +.............. ...+...+..+.+||++||..||.+|||++|+++||||+..
T Consensus 258 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 258 RTYVENR-----PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp HHHHHSS-----CCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHhhC-----ccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 1100000 000000000000000 00112347789999999999999999999999999999754
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-46 Score=347.04 Aligned_cols=263 Identities=26% Similarity=0.438 Sum_probs=216.1
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
.+.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.+
T Consensus 6 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------------- 71 (326)
T 2y0a_A 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-------------- 71 (326)
T ss_dssp CSCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC--------------
T ss_pred cCCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC--------------
Confidence 34567799999999999999999999999999999999875422 245678999999999
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.|+|++++++.+. .....++||||+ +++|.+++... ..+++..+..++.|++.||+|||++ |++||||||+|
T Consensus 72 ~hp~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~N 144 (326)
T 2y0a_A 72 QHPNVITLHEVYE----NKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPEN 144 (326)
T ss_dssp CCTTBCCEEEEEE----CSSEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGG
T ss_pred CCCCCCcEEEEEE----eCCEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHH
Confidence 7999999999887 677899999999 78999988654 4589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCch
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRS 252 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~a 252 (393)
|+++.++.. ...++|+|||++.... .......||+.|+|
T Consensus 145 Ill~~~~~~---------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~a 185 (326)
T 2y0a_A 145 IMLLDRNVP---------------------------------------KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185 (326)
T ss_dssp EEESCSSSS---------------------------------------SCCEEECCCTTCEECCTTSCCCCCCSCTTTCC
T ss_pred EEEecCCCC---------------------------------------CCCEEEEECCCCeECCCCCccccccCCcCcCC
Confidence 999765410 1149999999997654 23345678999999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
||++.+..++.++|||||||++|+|++|..||.+.+ ....+..+.......+....
T Consensus 186 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~------------------ 241 (326)
T 2y0a_A 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVNYEFEDEYF------------------ 241 (326)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHTCCCCCHHHH------------------
T ss_pred ceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHHhcCCCcCcccc------------------
Confidence 999998889999999999999999999999997654 33344444333222222111
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+..+.+||++||..||.+|||+.|+++||||++.
T Consensus 242 --------------------~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 242 --------------------SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp --------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred --------------------ccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 2345678899999999999999999999999999864
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=351.08 Aligned_cols=301 Identities=24% Similarity=0.391 Sum_probs=232.7
Q ss_pred CCCCCCccccccCCeeC--CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCC
Q psy12288 11 EYRPGGYCPVQIGDLFN--FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSN 86 (393)
Q Consensus 11 ~~~~~~~~~~~~~~~~~--~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~ 86 (393)
...++++.++-.|+.+. .+|++.+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+
T Consensus 8 ~~~~~~~~~~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l----- 82 (364)
T 3qyz_A 8 AAAAAAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF----- 82 (364)
T ss_dssp -------CCBCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-----
T ss_pred HHHhhcceEEEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-----
Confidence 34578889999999875 89999999999999999999999999999999987432 2236678999999999
Q ss_pred CCcccccCcccccceeccccceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 87 VHSSAYNTQASEKVIRLLNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
.|+|++++++.+.... ......++|||+++++|.+.+... .++...++.++.|++.||+|||++ |+
T Consensus 83 ---------~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~-~i 149 (364)
T 3qyz_A 83 ---------RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA-NV 149 (364)
T ss_dssp ---------CCTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TE
T ss_pred ---------CCCCCccceeEEecCCccccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC-Ce
Confidence 7999999998886432 223568999999999999988764 489999999999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+||||||+||+++.++ .++|+|||++......
T Consensus 150 vH~Dikp~NIl~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~ 186 (364)
T 3qyz_A 150 LHRDLKPSNLLLNTTC-------------------------------------------DLKICDFGLARVADPDHDHTG 186 (364)
T ss_dssp ECCCCCGGGEEECTTC-------------------------------------------CEEECCCTTCEECCGGGCBCC
T ss_pred ecCCCChHhEEECCCC-------------------------------------------CEEEEeCcceEecCCCCCccc
Confidence 9999999999998766 4999999998765422
Q ss_pred -CCCCCCCCCCchhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 -FADEIQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 -~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
.....||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+ ..+.+..+....|..+.+.+....
T Consensus 187 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH------YLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp TTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS------GGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred cccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhh
Confidence 2345789999999987654 48999999999999999999999998766 677888888888988776655432
Q ss_pred cccc-ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 319 KTLR-YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 319 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.... .+.. ........ ....+....+..+.+||.+||+.||.+|||+.|+++||||++..
T Consensus 261 ~~~~~~~~~-----~~~~~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 321 (364)
T 3qyz_A 261 NLKARNYLL-----SLPHKNKV-------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321 (364)
T ss_dssp CHHHHHHHH-----TSCCCCCC-------CHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred hhhHHHHHH-----hcCCccCC-------CHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence 1100 0000 00000000 00011134567889999999999999999999999999999864
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=368.93 Aligned_cols=293 Identities=25% Similarity=0.395 Sum_probs=214.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+.++|++.++||+|+||.||+|++..+++.||||++.... .....+.+|+.+|+.+ .|+||+
T Consensus 50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv 115 (458)
T 3rp9_A 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL--------------NHDHVV 115 (458)
T ss_dssp CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC--------------CCCCCC
Confidence 35679999999999999999999999999999999986432 2345678899999999 899999
Q ss_pred eccccceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++++.... .....+++|||+++++|...+... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.+
T Consensus 116 ~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~ 192 (458)
T 3rp9_A 116 KVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQD 192 (458)
T ss_dssp CEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT
T ss_pred ceEEEEecCCcccCceEEEEEeccccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCC
Confidence 9999885332 234679999999999999998764 4589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---------------------
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--------------------- 239 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--------------------- 239 (393)
+ .+||+|||+++....
T Consensus 193 ~-------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (458)
T 3rp9_A 193 C-------------------------------------------SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229 (458)
T ss_dssp C-------------------------------------------CEEECCCTTCBCTTSCTTCCCCCC------------
T ss_pred C-------------------------------------------CEeecccccchhccCccccccccccCcccccccccc
Confidence 6 499999999976532
Q ss_pred ---------CCCCCCCCCCCchhHHHh-cCCCCchhhHHhHHHHHHHHHh-----------CCCCCCCCCCCCC------
Q psy12288 240 ---------HFADEIQTRQYRSVEVLI-GAGYGPAADIWSTACMAFELAT-----------GDYLFDPKAGKEY------ 292 (393)
Q Consensus 240 ---------~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~~l~ell~-----------g~~pf~~~~~~~~------ 292 (393)
.....+||+.|+|||++. +..++.++|||||||++|||++ |+++|++.+....
T Consensus 230 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~ 309 (458)
T 3rp9_A 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKA 309 (458)
T ss_dssp ---------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC-------------
T ss_pred ccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccc
Confidence 123346799999999875 4568999999999999999998 7777766542111
Q ss_pred --------CCcHHHHHHHHHHhCCCChHHHhcCcccc--cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHH
Q psy12288 293 --------SRDDDHLAHIVELVGPIPKEVLSQGKKTL--RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADF 362 (393)
Q Consensus 293 --------~~~~~~~~~~~~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 362 (393)
....+++..+..+.|..+.+.+....... .+.... ...... .........+..+.+|
T Consensus 310 ~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~~s~~~~dL 376 (458)
T 3rp9_A 310 GNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIF------PKREGT-------DLAERFPASSADAIHL 376 (458)
T ss_dssp -------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTS------CCCCCC-------CGGGGSTTSCHHHHHH
T ss_pred cccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhc------CCCCCC-------CHHHHCCCCCHHHHHH
Confidence 11357888899999998887766543211 000000 000000 0001112446788999
Q ss_pred HHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 363 LLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 363 i~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
|++||..||.+|||++|+|+||||++..
T Consensus 377 l~~mL~~dP~~R~t~~e~L~Hp~f~~~~ 404 (458)
T 3rp9_A 377 LKRMLVFNPNKRITINECLAHPFFKEVR 404 (458)
T ss_dssp HHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHhccCccccCCHHHHhcCHhhhhcC
Confidence 9999999999999999999999999874
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=356.27 Aligned_cols=285 Identities=28% Similarity=0.438 Sum_probs=225.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpnIv~ 88 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM--------------RHENVIG 88 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC--------------CBTTBCC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC--------------CCcCCCC
Confidence 4679999999999999999999999999999999985432 2245678899999999 7999999
Q ss_pred ccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++.+..... ....+++|||+++++|.+.+... .+++..+..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 89 l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~ 164 (367)
T 1cm8_A 89 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNED 164 (367)
T ss_dssp CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT
T ss_pred ceeeEecCCccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCC
Confidence 9998863321 12457999999999999888763 489999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .+||+|||+++.........++|+.|+|||++.+ .
T Consensus 165 ~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~ 201 (367)
T 1cm8_A 165 C-------------------------------------------ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWM 201 (367)
T ss_dssp C-------------------------------------------CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTT
T ss_pred C-------------------------------------------CEEEEeeecccccccccCcCcCCCCcCCHHHHhCCC
Confidence 6 4999999999887766667789999999999988 6
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc--cccCCCCCeeeccCCC
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL--RYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 337 (393)
.++.++|||||||++|+|++|+.||.+.+ ...++..+....|..|.++........ .+.. ..+...
T Consensus 202 ~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~ 269 (367)
T 1cm8_A 202 RYTQTVDIWSVGCIMAEMITGKTLFKGSD------HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK------GLPELE 269 (367)
T ss_dssp CCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHH------HSCCCC
T ss_pred CCChhhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHH------hCCCCC
Confidence 78999999999999999999999998766 778899999999999887765432110 0000 000000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.. ....+....+..+.+||.+||..||.+|||++|+++||||++..
T Consensus 270 ~~-------~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 270 KK-------DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CC-------CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred CC-------CHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 00 00112234567899999999999999999999999999998764
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=346.70 Aligned_cols=250 Identities=25% Similarity=0.425 Sum_probs=213.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|++..+++.||+|+++... ...+.+.+|..+++.+ .|+|++++
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~Iv~~ 71 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV--------------THPFIIRM 71 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC--------------CBTTBCCE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC--------------CCCCCceE
Confidence 57999999999999999999999999999999987532 2345567888888887 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ....+++||||+ +++|.+.+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 72 ~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g- 143 (318)
T 1fot_A 72 WGTFQ----DAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNG- 143 (318)
T ss_dssp EEEEE----CSSEEEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTS-
T ss_pred eEEEE----eCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCC-
Confidence 99887 677899999999 78999988765 3489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||++..........+||+.|+|||++.+..++
T Consensus 144 ------------------------------------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 181 (318)
T 1fot_A 144 ------------------------------------------HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYN 181 (318)
T ss_dssp ------------------------------------------CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBC
T ss_pred ------------------------------------------CEEEeecCcceecCCccccccCCccccCHhHhcCCCCC
Confidence 49999999998776666677899999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|+|||||++|+|++|..||.+.+ .......+..
T Consensus 182 ~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~-------------------------------------- 217 (318)
T 1fot_A 182 KSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILN-------------------------------------- 217 (318)
T ss_dssp TTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHH--------------------------------------
T ss_pred cccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--------------------------------------
Confidence 99999999999999999999997544 2222222222
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||++|| +++|+++||||+++
T Consensus 218 ----~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 218 ----AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred ----CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 12223445667889999999999999999 89999999999875
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-47 Score=352.57 Aligned_cols=259 Identities=25% Similarity=0.412 Sum_probs=214.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.........+.+|+.+++.+ .|+|++++++
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l--------------~hpnIv~~~~ 68 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA--------------RHRNILHLHE 68 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS--------------CCTTBCCEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC--------------CCCCCCeEeE
Confidence 46799999999999999999999999999999999886655566788999999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....++||||+ +++|.+.+.... ..+++.++..++.|++.||+|||++ |++||||||+||+++.+.
T Consensus 69 ~~~----~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~--- 139 (321)
T 1tki_A 69 SFE----SMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRR--- 139 (321)
T ss_dssp EEE----ETTEEEEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSS---
T ss_pred EEe----cCCEEEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCC---
Confidence 887 566899999999 679998886543 3589999999999999999999998 999999999999997532
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
...++|+|||++...... .....+|+.|+|||++.+..++
T Consensus 140 --------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 181 (321)
T 1tki_A 140 --------------------------------------SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181 (321)
T ss_dssp --------------------------------------CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEEC
T ss_pred --------------------------------------CCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCC
Confidence 115999999998765432 2234689999999999988889
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|..||.+.+ ....+..+.......+...+
T Consensus 182 ~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~---------------------------- 227 (321)
T 1tki_A 182 TATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYTFDEEAF---------------------------- 227 (321)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCCCHHHH----------------------------
T ss_pred chhhHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHHHcCCCCCChhhh----------------------------
Confidence 99999999999999999999997654 33334444332222222111
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+..+.+||.+||..||.+|||+.|+++||||++.
T Consensus 228 ----------~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 228 ----------KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp ----------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred ----------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 2346788999999999999999999999999999764
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=343.06 Aligned_cols=279 Identities=27% Similarity=0.482 Sum_probs=216.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+ .+++.||+|.+.... .....+.+|+.+++.+ .|+|+++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 66 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKEL--------------KHSNIVKLY 66 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC--------------CCTTBCCEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhc--------------CCCCEeeee
Confidence 4799999999999999999998 678899999986432 2235677899998888 799999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....++|||++.+++.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 67 ~~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~--- 137 (288)
T 1ob3_A 67 DVIH----TKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREG--- 137 (288)
T ss_dssp EEEE----CSSCEEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTS---
T ss_pred eEEc----cCCeEEEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCC---
Confidence 9887 567799999999889998887643 4589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.+||+|||++...... .....+|+.|+|||++.+. .
T Consensus 138 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 177 (288)
T 1ob3_A 138 ----------------------------------------ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177 (288)
T ss_dssp ----------------------------------------CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCS
T ss_pred ----------------------------------------CEEEeECccccccCccccccccccccccccCchheeCCCC
Confidence 4999999998765422 3345689999999999865 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|||||||++|+|++|..||.+.+ ..+.+..+....+..+...+........+ .+. ...... .+
T Consensus 178 ~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~-~~-- 245 (288)
T 1ob3_A 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKY-DPN--FTVYEP-LP-- 245 (288)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTC-CTT--CCCCCC-CC--
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHHCCCChhhchhhhccccc-ccc--cccccC-cc--
Confidence 8999999999999999999999997655 66777778777776554333221111110 000 000000 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+....+..+.+||++||..||++|||++|+++||||++.
T Consensus 246 -------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 246 -------WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp -------GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred -------HHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 011223456788999999999999999999999999999864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=344.69 Aligned_cols=255 Identities=25% Similarity=0.420 Sum_probs=211.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
..++|++.++||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+||++++
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~~ 83 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN--------------KNPNIVNYL 83 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC--------------CCTTBCCEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC--------------CCCCCCeEe
Confidence 3568999999999999999999999999999999987433 3345678899999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .+...++||||+ +++|.+.+... .+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 84 ~~~~----~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~-- 153 (297)
T 3fxz_A 84 DSYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDG-- 153 (297)
T ss_dssp EEEE----ETTEEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC--
T ss_pred EEEE----ECCEEEEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCC--
Confidence 9887 566799999999 88998888764 389999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....||+.|+|||++.+..
T Consensus 154 -----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 192 (297)
T 3fxz_A 154 -----------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192 (297)
T ss_dssp -----------------------------------------CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSC
T ss_pred -----------------------------------------CEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCC
Confidence 4999999998765432 33457899999999999999
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|||||||++|+|++|..||...+ .......+.....+
T Consensus 193 ~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~-------------------------------- 234 (297)
T 3fxz_A 193 YGPKVDIWSLGIMAIEMIEGEPPYLNEN------PLRALYLIATNGTP-------------------------------- 234 (297)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHHCSC--------------------------------
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC--------------------------------
Confidence 9999999999999999999999997544 22222222211110
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+...+..+.+||.+||..||++|||++|+++||||+..+
T Consensus 235 -------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 277 (297)
T 3fxz_A 235 -------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK 277 (297)
T ss_dssp -------CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred -------CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence 0111244567889999999999999999999999999998654
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-47 Score=354.36 Aligned_cols=256 Identities=26% Similarity=0.406 Sum_probs=211.6
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
++...-.+|++.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.+ .|
T Consensus 3 i~~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h 68 (336)
T 3h4j_B 3 ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL--------------RH 68 (336)
T ss_dssp -CCSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC--------------CC
T ss_pred cCccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC--------------CC
Confidence 3344445799999999999999999999999999999998743 22345678999999988 89
Q ss_pred ccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
+||+++++.+. .....++||||+++++.+.+.... .+++.+++.++.|++.||+|||++ |++||||||+||++
T Consensus 69 pnIv~l~~~~~----~~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll 141 (336)
T 3h4j_B 69 PHIIKLYDVIT----TPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLL 141 (336)
T ss_dssp TTBCCEEEEEE----CSSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEE
T ss_pred CCCCeEEEEEE----eCCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEE
Confidence 99999999887 667899999999999999987763 489999999999999999999998 99999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEV 255 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~ 255 (393)
+.++ .+||+|||++..... .....+||+.|+|||+
T Consensus 142 ~~~~-------------------------------------------~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~ 178 (336)
T 3h4j_B 142 DDNL-------------------------------------------NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178 (336)
T ss_dssp CTTC-------------------------------------------CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGG
T ss_pred cCCC-------------------------------------------CEEEEEeccceeccCCcccccccCCcCcCCHHH
Confidence 8766 499999999876533 2345678999999999
Q ss_pred HhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..+ +.++|||||||++|+|++|+.||.+.........
T Consensus 179 ~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~--------------------------------------- 219 (336)
T 3h4j_B 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK--------------------------------------- 219 (336)
T ss_dssp SCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC---------------------------------------
T ss_pred HcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH---------------------------------------
Confidence 988776 7899999999999999999999976543221100
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
+......++...+..+.+||++||..||.+|||++|+++||||+..
T Consensus 220 ---------i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 220 ---------VNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp ---------CCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred ---------HHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 0001112334566788999999999999999999999999999754
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=353.92 Aligned_cols=264 Identities=24% Similarity=0.349 Sum_probs=207.9
Q ss_pred CCccccccCCee-CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCc
Q psy12288 15 GGYCPVQIGDLF-NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 15 ~~~~~~~~~~~~-~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+...++.....+ -++|++.++||+|+||.||+|++..+++.||+|+++.. .........|..+++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~------- 81 (353)
T 3txo_A 9 GNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR------- 81 (353)
T ss_dssp --------------CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT-------
T ss_pred CCCCCCCCcCCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc-------
Confidence 444455555444 36899999999999999999999999999999998753 223355677888888772
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|++++++++.+. ....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||
T Consensus 82 ------~hp~Iv~l~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-givHr 148 (353)
T 3txo_A 82 ------NHPFLTQLFCCFQ----TPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK-GIIYR 148 (353)
T ss_dssp ------TCTTBCCEEEEEE----CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCC
T ss_pred ------CCCceeeEEEEEE----eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 6899999999987 677899999999 78999888765 3489999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEI 245 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~ 245 (393)
||||+|||++.++ .+||+|||++.... ......+
T Consensus 149 Dlkp~NILl~~~g-------------------------------------------~ikL~DFG~a~~~~~~~~~~~~~~ 185 (353)
T 3txo_A 149 DLKLDNVLLDHEG-------------------------------------------HCKLADFGMCKEGICNGVTTATFC 185 (353)
T ss_dssp CCCGGGEEECTTS-------------------------------------------CEEECCCTTCBCSCC---------
T ss_pred CCCHHHEEECCCC-------------------------------------------CEEEccccceeecccCCccccccC
Confidence 9999999998776 49999999987532 2234557
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ .......+..
T Consensus 186 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~--------------------- 238 (353)
T 3txo_A 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILN--------------------- 238 (353)
T ss_dssp CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH---------------------
T ss_pred CCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC------HHHHHHHHHc---------------------
Confidence 8999999999999889999999999999999999999997654 2333333322
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH------HHHhcCCCCCCC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA------ADCLRHPWLNPR 389 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~ell~hp~~~~~ 389 (393)
....++...+..+.+||++||+.||.+||++ +|+++||||+++
T Consensus 239 ---------------------~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 239 ---------------------DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp ---------------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred ---------------------CCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 2223344566788999999999999999998 899999999986
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=353.98 Aligned_cols=270 Identities=25% Similarity=0.361 Sum_probs=214.7
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
.++...+..+..+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l--------- 85 (362)
T 2bdw_A 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL--------- 85 (362)
T ss_dssp ---------CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC---------
T ss_pred CCceEeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC---------
Confidence 34455566777788899999999999999999999999999999999875432 235678899999999
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
.|+||+++++.+. .....++||||+ +++|.+.+... ..+++..+..++.||+.||+|||++ ||+|||
T Consensus 86 -----~hpnIv~~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~D 153 (362)
T 2bdw_A 86 -----QHPNIVRLHDSIQ----EESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN-GIVHRN 153 (362)
T ss_dssp -----CCTTBCCEEEEEE----CSSEEEEEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCC
T ss_pred -----CCCCCCeEEEEEE----eCCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecc
Confidence 8999999999887 677899999999 77998888765 3489999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQT 247 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t 247 (393)
|||+||+++.++. ...+||+|||++...... .....||
T Consensus 154 lkp~NIll~~~~~----------------------------------------~~~~kl~DfG~a~~~~~~~~~~~~~gt 193 (362)
T 2bdw_A 154 LKPENLLLASKAK----------------------------------------GAAVKLADFGLAIEVNDSEAWHGFAGT 193 (362)
T ss_dssp CSGGGEEESCSST----------------------------------------TCCEEECCCTTCBCCTTCCSCCCSCSC
T ss_pred CchHHEEEecCCC----------------------------------------CCCEEEeecCcceEecCCcccccCCCC
Confidence 9999999976542 124999999999766432 3345789
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
+.|+|||++.+..++.++|||||||++|+|++|..||.+.+ .......+.......|...
T Consensus 194 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~-------------- 253 (362)
T 2bdw_A 194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAGAYDYPSPE-------------- 253 (362)
T ss_dssp TTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCTTG--------------
T ss_pred ccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCccc--------------
Confidence 99999999999889999999999999999999999997644 2233333322111111110
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+..+.+||.+||..||.+|||+.|+++||||.+
T Consensus 254 ------------------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 290 (362)
T 2bdw_A 254 ------------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 290 (362)
T ss_dssp ------------------------GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred ------------------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence 1245678889999999999999999999999999964
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=352.64 Aligned_cols=283 Identities=27% Similarity=0.437 Sum_probs=218.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
++|++.++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+|++++++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 67 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL--------------KHANIVTLHD 67 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC--------------CCTTBCCEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc--------------CCCCCCeeee
Confidence 47999999999999999999999999999999987432 2223456788888888 7999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .....++||||+++++.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 68 ~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~---- 137 (324)
T 3mtl_A 68 IIH----TEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERG---- 137 (324)
T ss_dssp EEE----CSSCEEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTC----
T ss_pred EEe----eCCEEEEEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCC----
Confidence 887 567799999999999999887653 4589999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-CCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG-AGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~ 261 (393)
.++|+|||++...... .....+|+.|+|||++.+ ..+
T Consensus 138 ---------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 178 (324)
T 3mtl_A 138 ---------------------------------------ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178 (324)
T ss_dssp ---------------------------------------CEEECSSSEEECC------------CGGGCCHHHHTTCCCC
T ss_pred ---------------------------------------CEEEccCcccccccCCccccccccCcccccChhhhcCCCCC
Confidence 4999999998755422 234567999999999987 457
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|+.||.+.+ ..+.+..+....|..+...+........+..... +.....
T Consensus 179 ~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-- 245 (324)
T 3mtl_A 179 STQIDMWGVGCIFYEMATGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY-----PKYRAE-- 245 (324)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCC-----CCCCCC--
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChHhchhhhcchhhccccc-----ccccch--
Confidence 999999999999999999999998765 6778888888888766644432211111000000 000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
... ......+..+.+||++||..||.+|||++|+++||||.+..+
T Consensus 246 -~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 246 -ALL----SHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp -CHH----HHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred -hhh----hhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence 000 111345678899999999999999999999999999998764
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-46 Score=353.85 Aligned_cols=258 Identities=22% Similarity=0.350 Sum_probs=212.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|++..+++.||+|++++.. .....+..|..+++.+. .|+||+++
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~-------------~hp~Iv~l 118 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS-------------NHPFLVGL 118 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHT-------------TCTTBCCE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcC-------------CCCCcCee
Confidence 58999999999999999999999999999999997542 22345678998888773 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++++. ....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 119 ~~~~~----~~~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g- 190 (396)
T 4dc2_A 119 HSCFQ----TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG- 190 (396)
T ss_dssp EEEEE----CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTS-
T ss_pred EEEEE----ECCEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCC-
Confidence 99987 677899999999 77998888765 3489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc---cCCCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~---~~~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|||+++.. .......+||+.|+|||++.+.
T Consensus 191 ------------------------------------------~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~ 228 (396)
T 4dc2_A 191 ------------------------------------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228 (396)
T ss_dssp ------------------------------------------CEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTC
T ss_pred ------------------------------------------CEEEeecceeeecccCCCccccccCCcccCCchhhcCC
Confidence 4999999998753 2334556899999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCC--CcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYS--RDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.++.++|+|||||++|+|++|+.||......... .....
T Consensus 229 ~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~--------------------------------------- 269 (396)
T 4dc2_A 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY--------------------------------------- 269 (396)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHH---------------------------------------
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHH---------------------------------------
Confidence 9999999999999999999999999754322110 00011
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH------HHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA------ADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~ell~hp~~~~~ 389 (393)
....+......++...+..+.+||++||+.||.+||++ +|+++||||+++
T Consensus 270 --~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 270 --LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp --HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred --HHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 01122333344566677889999999999999999985 799999999976
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-46 Score=354.61 Aligned_cols=285 Identities=25% Similarity=0.413 Sum_probs=224.1
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|.+..+++.||||++..+. ....+|+.+++.+ .|+||+++++
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l--------------~hpnIv~l~~ 67 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL--------------DHVNIIKLVD 67 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC--------------CCTTBCCEEE
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc--------------CCCCccchhh
Confidence 4568999999999999999999999999999999887543 3445899999988 7899999998
Q ss_pred cceeec----------------------------------CCCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHH
Q psy12288 106 DFKIYS----------------------------------RNGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTII 149 (393)
Q Consensus 106 ~~~~~~----------------------------------~~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~ 149 (393)
.+.... ....+.++||||++++|.+.+.. .....+++..++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~ 147 (383)
T 3eb0_A 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYI 147 (383)
T ss_dssp EEEEC-------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred eeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 885432 24456899999998887777653 223558999999999
Q ss_pred HHHHHHHHHhhhcCCeeeccCCCCceEEee-chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEE
Q psy12288 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCV-DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKI 228 (393)
Q Consensus 150 ~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl 228 (393)
.||+.||+|||++ |++||||||+||+++. ++ .+||
T Consensus 148 ~qi~~aL~~LH~~-gi~H~Dikp~Nil~~~~~~-------------------------------------------~~kl 183 (383)
T 3eb0_A 148 YQLFRAVGFIHSL-GICHRDIKPQNLLVNSKDN-------------------------------------------TLKL 183 (383)
T ss_dssp HHHHHHHHHHHTT-TEECSCCCGGGEEEETTTT-------------------------------------------EEEE
T ss_pred HHHHHHHHHHHHC-cCccCccCHHHEEEcCCCC-------------------------------------------cEEE
Confidence 9999999999998 9999999999999973 33 5999
Q ss_pred eecCcccccc--CCCCCCCCCCCCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHH
Q psy12288 229 ADLGNACWID--DHFADEIQTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL 305 (393)
Q Consensus 229 ~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 305 (393)
+|||++.... .......+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+ ..+++..+...
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~ 257 (383)
T 3eb0_A 184 CDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET------SIDQLVRIIQI 257 (383)
T ss_dssp CCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHH
T ss_pred EECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHH
Confidence 9999998653 2344567899999999998764 8999999999999999999999998766 77889999999
Q ss_pred hCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 306 VGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 306 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
.|..+.+............ ..+........ ..++...+..+.+||.+||..||.+|||+.|+++|||
T Consensus 258 ~g~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 324 (383)
T 3eb0_A 258 MGTPTKEQMIRMNPHYTEV-------RFPTLKAKDWR------KILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324 (383)
T ss_dssp HCCCCHHHHHHHCTTC--C-------CCCCCCCCCHH------HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred hCCCCHHHHHHhCcccccc-------cCCccCcccHH------hhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHH
Confidence 9988776655433221111 01111111111 1133456778999999999999999999999999999
Q ss_pred CCCCC
Q psy12288 386 LNPRR 390 (393)
Q Consensus 386 ~~~~~ 390 (393)
|++.+
T Consensus 325 f~~~~ 329 (383)
T 3eb0_A 325 FDHLR 329 (383)
T ss_dssp GHHHH
T ss_pred HHHHH
Confidence 97653
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=356.83 Aligned_cols=294 Identities=28% Similarity=0.417 Sum_probs=223.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|+||+
T Consensus 23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~nIv 88 (432)
T 3n9x_A 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL--------------KSDYII 88 (432)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc--------------CCCCcc
Confidence 45679999999999999999999999999999999987532 2345678999999999 789999
Q ss_pred eccccceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+..... ....+++|||+++++|.+.+... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.+
T Consensus 89 ~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~ 165 (432)
T 3n9x_A 89 RLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQD 165 (432)
T ss_dssp CEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT
T ss_pred eEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCC
Confidence 99998863221 12579999999999999998764 4489999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------------------
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------------------- 240 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------------------- 240 (393)
+ .+||+|||+++.....
T Consensus 166 ~-------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (432)
T 3n9x_A 166 C-------------------------------------------SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202 (432)
T ss_dssp C-------------------------------------------CEEECCCTTCEEC-----------------------
T ss_pred C-------------------------------------------CEEEccCCCccccccccccccccccccccccccccc
Confidence 6 4999999999865322
Q ss_pred -----CCCCCCCCCCchhHHHh-cCCCCchhhHHhHHHHHHHHHhCCC-----------CCCCCCCCCC-----------
Q psy12288 241 -----FADEIQTRQYRSVEVLI-GAGYGPAADIWSTACMAFELATGDY-----------LFDPKAGKEY----------- 292 (393)
Q Consensus 241 -----~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~~l~ell~g~~-----------pf~~~~~~~~----------- 292 (393)
....+||+.|+|||++. ...++.++|||||||++|+|++|.. +|++.+....
T Consensus 203 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~ 282 (432)
T 3n9x_A 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHE 282 (432)
T ss_dssp --------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CH
T ss_pred chhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccc
Confidence 24567899999999975 4568999999999999999998544 4433321110
Q ss_pred CCcHHHHHHHHHHhCCCChHHHhcCcccc--cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccC
Q psy12288 293 SRDDDHLAHIVELVGPIPKEVLSQGKKTL--RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVN 370 (393)
Q Consensus 293 ~~~~~~~~~~~~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 370 (393)
....+++..+..+.|..+.+.+....... .+... .....+... ... ....++.+.+||++||..|
T Consensus 283 ~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~---~~~~s~~~~dLl~~mL~~d 349 (432)
T 3n9x_A 283 KSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKL------FPHRKPINL----KQK---YPSISDDGINLLESMLKFN 349 (432)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHT------SCCCCCCCH----HHH---STTSCHHHHHHHHHHSCSS
T ss_pred cchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHh------CCCCCCCCH----HHH---CCCCCHHHHHHHHHHhcCC
Confidence 11367888999999998887765432210 00000 000000000 000 1235678899999999999
Q ss_pred CCCCcCHHHHhcCCCCCCCCC
Q psy12288 371 QKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 371 P~~Rpt~~ell~hp~~~~~~~ 391 (393)
|.+|||++|+|+||||++++.
T Consensus 350 P~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 350 PNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp TTTSCCHHHHHTCGGGTTTCC
T ss_pred cccCCCHHHHhcChhhhhccC
Confidence 999999999999999998753
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=359.28 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=212.0
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
+..+.++|++.+.||+|+||.||+|.+..+++.+|+|++.... ...+.+.+|+.+++.+ .|+|
T Consensus 6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l--------------~hpn 71 (444)
T 3soa_A 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL--------------KHPN 71 (444)
T ss_dssp -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC--------------CBTT
T ss_pred cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC--------------CCcC
Confidence 3456779999999999999999999999999999999987543 2245678999999999 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|+++++.+. .....++||||+ +++|.+.+... ..+++..+..++.||+.||+|||++ ||+||||||+|||++
T Consensus 72 Iv~l~~~~~----~~~~~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~ 144 (444)
T 3soa_A 72 IVRLHDSIS----EEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLA 144 (444)
T ss_dssp BCCEEEEEE----CSSEEEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEES
T ss_pred CCeEEEEEE----ECCEEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEe
Confidence 999999887 677899999999 77999988775 3489999999999999999999998 999999999999997
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEV 255 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~ 255 (393)
.+.. ...+||+|||++...... .....||+.|+|||+
T Consensus 145 ~~~~----------------------------------------~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~ 184 (444)
T 3soa_A 145 SKLK----------------------------------------GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184 (444)
T ss_dssp BSST----------------------------------------TCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHH
T ss_pred ccCC----------------------------------------CCcEEEccCceeEEecCCCceeecccCCcccCCHHH
Confidence 5421 125999999999765432 234678999999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+..++.++|||||||++|+|++|..||.+.+ .......+.......|..
T Consensus 185 l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~----------------------- 235 (444)
T 3soa_A 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDED------QHRLYQQIKAGAYDFPSP----------------------- 235 (444)
T ss_dssp HTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCCCTT-----------------------
T ss_pred hcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhCCCCCCcc-----------------------
Confidence 999889999999999999999999999997654 333333333221111111
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.....+..+.+||.+||..||.+|||+.|+|+||||+.
T Consensus 236 ---------------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 236 ---------------EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp ---------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred ---------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 01245678899999999999999999999999999964
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=350.37 Aligned_cols=308 Identities=26% Similarity=0.398 Sum_probs=233.6
Q ss_pred cccccccCCCCCCccccccCCe---eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHH
Q psy12288 4 DQQESYMEYRPGGYCPVQIGDL---FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVL 77 (393)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~---~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~ 77 (393)
+..++-.-..+.++.+..++.. +.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+
T Consensus 15 ~~~~~m~~~~~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~ 94 (371)
T 4exu_A 15 VPRGSMSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 94 (371)
T ss_dssp ------CCSSCTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred cccCceeeeccccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHH
Confidence 3445555667788887777663 6789999999999999999999999999999999987532 224567789999
Q ss_pred HHHhcccCCCCcccccCcccccceeccccceeecCC--CeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q psy12288 78 LKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN--GTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 78 l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~ 155 (393)
++.+ .|+|++++++.+...... ....++|||+++++|.+.+.. .+++..+..++.|++.|
T Consensus 95 l~~l--------------~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~a 156 (371)
T 4exu_A 95 LKHM--------------QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKG 156 (371)
T ss_dssp HHHC--------------CCTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHH
T ss_pred HHhc--------------CCCCchhhhhheeccCCcccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHH
Confidence 9999 789999999988733221 113499999999998887632 38999999999999999
Q ss_pred HHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccc
Q psy12288 156 LNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC 235 (393)
Q Consensus 156 l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~ 235 (393)
|+|||++ |++||||||+||+++.++ .++|+|||++.
T Consensus 157 L~~LH~~-~ivH~Dikp~NIll~~~~-------------------------------------------~~kL~Dfg~a~ 192 (371)
T 4exu_A 157 LKYIHSA-GVVHRDLKPGNLAVNEDC-------------------------------------------ELKILDFGLAR 192 (371)
T ss_dssp HHHHHHT-TCCCSCCCGGGEEECTTC-------------------------------------------CEEECSTTCC-
T ss_pred HHHHHHC-CCcCCCcCHHHeEECCCC-------------------------------------------CEEEEecCccc
Confidence 9999998 999999999999998766 49999999998
Q ss_pred cccCCCCCCCCCCCCchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHH
Q psy12288 236 WIDDHFADEIQTRQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314 (393)
Q Consensus 236 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 314 (393)
..........+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+ ..+.+..+....|..+.+..
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 193 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD------YLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHH
T ss_pred ccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCcHHHH
Confidence 77766667788999999999987 678999999999999999999999998765 77888889999998888776
Q ss_pred hcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
........... ........... ........+..+.+||++||+.||.+|||++|+++||||+...
T Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 267 QKLNDKAAKSY----IQSLPQTPRKD-------FTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp TTCSCHHHHHH----HHHSCCCCCCC-------HHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHhhhhhhhhh----hhccCCCcchh-------HHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence 54321100000 00000000000 0011134567899999999999999999999999999998764
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=347.42 Aligned_cols=250 Identities=22% Similarity=0.352 Sum_probs=209.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|++..+++.||+|+++.. ......+.+|..+++.+ .|++++++
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~l 70 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--------------RHPFLTAL 70 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC--------------CCTTBCCE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC--------------CCCcCcce
Confidence 5799999999999999999999999999999999753 22345677888888887 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 71 ~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g- 142 (337)
T 1o6l_A 71 KYAFQ----THDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDG- 142 (337)
T ss_dssp EEEEE----CSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTS-
T ss_pred EEEEE----eCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCC-
Confidence 99887 667899999999 77998888765 3489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|||++.... ......+||+.|+|||++.+.
T Consensus 143 ------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 180 (337)
T 1o6l_A 143 ------------------------------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180 (337)
T ss_dssp ------------------------------------------CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred ------------------------------------------CEEEeeccchhhcccCCCcccccccChhhCChhhhcCC
Confidence 49999999987532 233456789999999999998
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|+|||||++|+|++|..||.+.+ .......+.
T Consensus 181 ~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~------------------------------------ 218 (337)
T 1o6l_A 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELIL------------------------------------ 218 (337)
T ss_dssp CBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH------------------------------------
T ss_pred CCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHH------------------------------------
Confidence 99999999999999999999999997543 222222221
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||.+||..||.+|| +++|+++||||+++
T Consensus 219 ------~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 219 ------MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp ------HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred ------cCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 122223455677889999999999999999 99999999999875
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-46 Score=349.92 Aligned_cols=271 Identities=24% Similarity=0.380 Sum_probs=210.1
Q ss_pred CCCccccccCC-eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCC
Q psy12288 14 PGGYCPVQIGD-LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSN 86 (393)
Q Consensus 14 ~~~~~~~~~~~-~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~ 86 (393)
+|++.++..++ .+.++|++.+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+
T Consensus 9 ~g~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l----- 83 (351)
T 3c0i_A 9 GGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML----- 83 (351)
T ss_dssp -----------CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-----
T ss_pred CcccccccCCCCccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-----
Confidence 35555554444 45789999999999999999999999999999999986421 1346688999999999
Q ss_pred CCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q psy12288 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQC 163 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~ 163 (393)
.|+||+++++.+. ....+++||||+ +++|.+.+... ....+++..+..++.||+.||+|||++
T Consensus 84 ---------~hpnIv~~~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~- 149 (351)
T 3c0i_A 84 ---------KHPHIVELLETYS----SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149 (351)
T ss_dssp ---------CCTTBCCEEEEEE----ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ---------CCCCCCcEEEEEE----eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 8999999999887 567899999999 68888777543 223488999999999999999999998
Q ss_pred CeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---
Q psy12288 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--- 240 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--- 240 (393)
|++||||||+||+++.++. ...+||+|||++......
T Consensus 150 ~ivHrDlkp~NIl~~~~~~----------------------------------------~~~vkl~Dfg~a~~~~~~~~~ 189 (351)
T 3c0i_A 150 NIIHRDVKPHCVLLASKEN----------------------------------------SAPVKLGGFGVAIQLGESGLV 189 (351)
T ss_dssp TEECSCCSGGGEEECSSST----------------------------------------TCCEEECCCTTCEECCTTSCB
T ss_pred CceeccCChHHeEEecCCC----------------------------------------CCcEEEecCcceeEecCCCee
Confidence 9999999999999976542 124999999999766433
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.. ......+.......+...+
T Consensus 190 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~~~~~~~------ 256 (351)
T 3c0i_A 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYKMNPRQW------ 256 (351)
T ss_dssp CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCCCCHHHH------
T ss_pred ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCCCCcccc------
Confidence 334578999999999999889999999999999999999999996522 1222222221111111110
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...+..+.+||++||..||.+|||+.|+++||||++
T Consensus 257 --------------------------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~ 292 (351)
T 3c0i_A 257 --------------------------------SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292 (351)
T ss_dssp --------------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred --------------------------------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence 234568889999999999999999999999999976
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-46 Score=351.15 Aligned_cols=258 Identities=22% Similarity=0.377 Sum_probs=201.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|+||.||+|++..+++.||+|++.......+.+.+|+.+++.+ .|+||+++++.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~~~~~ 84 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL--------------RHPNIVRFKEV 84 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC--------------CCCCCCcEEEE
Confidence 5799999999999999999999999999999999987766678889999999998 89999999999
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....++||||+ +++|.+.+.... .+++..++.++.|++.||+|||++ |++||||||+||+++.++.
T Consensus 85 ~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~--- 154 (361)
T 3uc3_A 85 IL----TPTHLAIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPA--- 154 (361)
T ss_dssp EE----CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSS---
T ss_pred Ee----eCCEEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCC---
Confidence 87 677899999999 789998887653 489999999999999999999998 9999999999999975541
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCCCc
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
..+||+|||+++... .......||+.|+|||++.+..+..
T Consensus 155 --------------------------------------~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 196 (361)
T 3uc3_A 155 --------------------------------------PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDG 196 (361)
T ss_dssp --------------------------------------CCEEECCCCCC---------------CTTSCHHHHHCSSCCH
T ss_pred --------------------------------------ceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCC
Confidence 249999999987432 2334557899999999999887755
Q ss_pred h-hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 264 A-ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 264 ~-~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
+ +|||||||++|+|++|+.||.+...... ....+..+.......|.
T Consensus 197 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~------------------------------- 243 (361)
T 3uc3_A 197 KIADVWSCGVTLYVMLVGAYPFEDPEEPRD--YRKTIQRILSVKYSIPD------------------------------- 243 (361)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCC----CCC--HHHHHHHHHTTCCCCCT-------------------------------
T ss_pred CeeeeehhHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhcCCCCCCC-------------------------------
Confidence 5 9999999999999999999976543221 11111111111111110
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+..+.+||++||..||.+|||+.|+++||||..
T Consensus 244 ---------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 244 ---------DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp ---------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred ---------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence 1134578889999999999999999999999999954
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-46 Score=348.08 Aligned_cols=291 Identities=26% Similarity=0.423 Sum_probs=218.0
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
+....++|++.++||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|+|
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~ 94 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL--------------QHRN 94 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC--------------CCTT
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc--------------CCCC
Confidence 3344579999999999999999999999999999999987432 2235567899999988 7999
Q ss_pred ceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
++++++.+. .+...++||||++++|.+++.... .+++..++.++.||+.||+|||++ |++||||||+||+++.
T Consensus 95 iv~~~~~~~----~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~ 167 (329)
T 3gbz_A 95 IIELKSVIH----HNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSV 167 (329)
T ss_dssp BCCEEEEEE----ETTEEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC
T ss_pred cceEEEEEe----cCCEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEec
Confidence 999999887 567899999999889999987753 489999999999999999999998 9999999999999965
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~ 256 (393)
++.. ....++|+|||++..... ......+|+.|+|||++
T Consensus 168 ~~~~--------------------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~ 209 (329)
T 3gbz_A 168 SDAS--------------------------------------ETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209 (329)
T ss_dssp -------------------------------------------CCEEEECCTTHHHHHC-----------CCTTCCHHHH
T ss_pred CCCC--------------------------------------ccceEEECcCCCccccCCcccccCCCcCCccccCHHHh
Confidence 4420 022599999999876542 23345679999999999
Q ss_pred hcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+.. ++.++|||||||++|+|++|..||...+ ..+.+..+....+..+...+........+.. ....
T Consensus 210 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 277 (329)
T 3gbz_A 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS------EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ------SFPK 277 (329)
T ss_dssp TTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT------TCCC
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC------HHHHHHHHHHHhCCCchhhhhhhhhhhhhhh------hhhh
Confidence 8754 7999999999999999999999998765 6777888888877765543322211111100 0011
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.........+ +...+..+.+||++||..||.+|||++|+++||||++..
T Consensus 278 ~~~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 326 (329)
T 3gbz_A 278 FRGKTLKRVL------GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND 326 (329)
T ss_dssp CCCCCHHHHH------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred hccccHhhhc------ccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence 1111111111 123567889999999999999999999999999999764
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=349.40 Aligned_cols=290 Identities=24% Similarity=0.405 Sum_probs=228.1
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..|+....+|++.++||+|+||.||+|.+..+++ ||+|.+.... ....+|+.+++.+ .|+|+
T Consensus 33 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~---~~~~~E~~il~~l--------------~h~ni 94 (394)
T 4e7w_A 33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK---RFKNRELQIMRIV--------------KHPNV 94 (394)
T ss_dssp SSCCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT---TSCCHHHHHHHTC--------------CCTTB
T ss_pred CCCCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc---chHHHHHHHHHhC--------------CCCCc
Confidence 4577778899999999999999999999987776 7888765432 3345799999998 89999
Q ss_pred eeccccceeecC--CCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 101 IRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 101 ~~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+++++.+..... ...++++||||+.+++...+.. .....+++..++.++.||+.||+|||++ ||+||||||+|||
T Consensus 95 v~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nil 173 (394)
T 4e7w_A 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLL 173 (394)
T ss_dssp CCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEE
T ss_pred ceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEE
Confidence 999999875442 3456889999998887766542 1234589999999999999999999998 9999999999999
Q ss_pred Ee-echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchh
Q psy12288 177 MC-VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSV 253 (393)
Q Consensus 177 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aP 253 (393)
++ .++ .+||+|||+++... .......+|+.|+||
T Consensus 174 l~~~~~-------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aP 210 (394)
T 4e7w_A 174 LDPPSG-------------------------------------------VLKLIDFGSAKILIAGEPNVSYICSRYYRAP 210 (394)
T ss_dssp EETTTT-------------------------------------------EEEECCCTTCEECCTTCCCCSSCSCGGGCCH
T ss_pred EcCCCC-------------------------------------------cEEEeeCCCcccccCCCCCcccccCcCccCH
Confidence 97 444 59999999997653 334456789999999
Q ss_pred HHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++.+. .++.++|||||||++|+|++|+.||.+.+ ..+++..+....|..+.+.+.......... .
T Consensus 211 E~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~-------~ 277 (394)
T 4e7w_A 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES------GIDQLVEIIKVLGTPSREQIKTMNPNYMEH-------K 277 (394)
T ss_dssp HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCGGGSSS-------C
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhChhhhhh-------c
Confidence 999875 48999999999999999999999998766 778899999999988877665432221110 0
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.+...+..... .++...+..+.+||.+||+.||.+|||+.|+++||||++.+.
T Consensus 278 ~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 278 FPQIRPHPFSK------VFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp CCCCCCCCHHH------HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred cccccCCcHHH------hccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 11111111111 123446678999999999999999999999999999998653
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=348.15 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=213.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
-++|++.+.||+|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++.+ .|+++++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~ 105 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--------------NFPFLVK 105 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC--------------CCCCCCe
Confidence 358999999999999999999999999999999987532 2335667888888887 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. ....+++||||+ +++|.+.+.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 106 ~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g 178 (350)
T 1rdq_E 106 LEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQG 178 (350)
T ss_dssp EEEEEE----CSSEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTS
T ss_pred EEEEEE----cCCEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCC
Confidence 999887 677899999999 789999887653 489999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..........+||+.|+|||++.+..+
T Consensus 179 -------------------------------------------~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~ 215 (350)
T 1rdq_E 179 -------------------------------------------YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGY 215 (350)
T ss_dssp -------------------------------------------CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCB
T ss_pred -------------------------------------------CEEEcccccceeccCCcccccCCccccCHHHhcCCCC
Confidence 4999999999877666667789999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||.+.+ .......+..
T Consensus 216 ~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~------------------------------------- 252 (350)
T 1rdq_E 216 NKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVS------------------------------------- 252 (350)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH-------------------------------------
T ss_pred CCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHHc-------------------------------------
Confidence 999999999999999999999997544 2222222221
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....++...+..+.++|++||..||.+||+ ++|+++||||+++
T Consensus 253 -----~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 253 -----GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred -----CCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 222234456678899999999999999998 9999999999875
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=352.75 Aligned_cols=285 Identities=21% Similarity=0.376 Sum_probs=225.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
..+|++.++||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.+ .|+||+++++.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l--------------~hpniv~l~~~ 115 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL--------------DHCNIVRLRYF 115 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTC--------------CCTTBCCEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHc--------------CCCCccceeeE
Confidence 458999999999999999999999999999999887542 3445899999998 89999999988
Q ss_pred ceeecC--CCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 107 FKIYSR--NGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 107 ~~~~~~--~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+..... ...++++||||+.+++.+.+.. .....+++..++.++.||+.||+|||++ ||+||||||+|||++.++.
T Consensus 116 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~ 194 (420)
T 1j1b_A 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTA 194 (420)
T ss_dssp EEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTT
T ss_pred EeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCC
Confidence 865433 3456789999998888776643 2235589999999999999999999998 9999999999999985542
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcC-
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~- 259 (393)
.+||+|||+++... .......+|+.|+|||++.+.
T Consensus 195 ------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 232 (420)
T 1j1b_A 195 ------------------------------------------VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 232 (420)
T ss_dssp ------------------------------------------EEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCS
T ss_pred ------------------------------------------eEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCC
Confidence 48999999998653 233456789999999999875
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|||||||++|+|++|+.||.+.+ ..+++..+....|..+.+.+.........+. .+.....
T Consensus 233 ~~~~~~DiwSlG~il~ell~G~~pf~~~~------~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~-------~p~~~~~ 299 (420)
T 1j1b_A 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDS------GVDQLVEIIKVLGTPTREQIREMNPNYTEFK-------FPQIKAH 299 (420)
T ss_dssp SCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCSCCHHHHHHHCSCCCCCC-------CCCCCCC
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhChhhhhhc-------cCccCCC
Confidence 68999999999999999999999998765 6788899999999887766654322211110 0000100
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.... .++...+..+.+||.+||..||.+|||+.|+++||||.+.+
T Consensus 300 ~~~~------~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 300 PWTK------VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CHHH------HSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred CHHH------hcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0001 12234567899999999999999999999999999997653
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=340.67 Aligned_cols=269 Identities=27% Similarity=0.444 Sum_probs=217.6
Q ss_pred ccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCc
Q psy12288 17 YCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
+.|.. ++.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.+
T Consensus 2 ~~~~~-~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------- 72 (321)
T 2a2a_A 2 MEPFK-QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-------- 72 (321)
T ss_dssp CCCCB-CSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC--------
T ss_pred CCccc-chhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC--------
Confidence 33444 45567899999999999999999999999999999999875432 235678999999999
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|+|++++++.+. .....++||||+ +++|.+++... ..+++..+..++.|++.||+|||++ |++||
T Consensus 73 ------~h~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~ 139 (321)
T 2a2a_A 73 ------LHHNVITLHDVYE----NRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK-KIAHF 139 (321)
T ss_dssp ------CCTTBCCEEEEEE----CSSEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT-TEECC
T ss_pred ------CCCCcceEEEEEe----cCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecC
Confidence 7899999999887 667899999999 78999988764 4589999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~ 246 (393)
||||+||+++.++.. ...++|+|||++...... .....|
T Consensus 140 dikp~NIl~~~~~~~---------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~g 180 (321)
T 2a2a_A 140 DLKPENIMLLDKNIP---------------------------------------IPHIKLIDFGLAHEIEDGVEFKNIFG 180 (321)
T ss_dssp CCSGGGEEESCTTSS---------------------------------------SCCEEECCCTTCEECCTTCCCCCCCS
T ss_pred CCChHHEEEecCCCC---------------------------------------cCCEEEccCccceecCccccccccCC
Confidence 999999999766510 114899999998765432 344578
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
|+.|+|||++.+..++.++||||||+++|+|++|..||.+.+ ....+..+.......+....
T Consensus 181 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~------------ 242 (321)
T 2a2a_A 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITSVSYDFDEEFF------------ 242 (321)
T ss_dssp CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCHHHH------------
T ss_pred CCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcccccChhhh------------
Confidence 999999999999889999999999999999999999997544 33333333322222222111
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+..+.+||++||..||.+|||+.|+++||||++..
T Consensus 243 --------------------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~ 280 (321)
T 2a2a_A 243 --------------------------SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (321)
T ss_dssp --------------------------TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred --------------------------cccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence 23456788999999999999999999999999998753
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=345.53 Aligned_cols=252 Identities=21% Similarity=0.329 Sum_probs=210.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ........|..+++.+. .|+++++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~-------------~hp~iv~ 82 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-------------EHPFLTH 82 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT-------------TCTTBCC
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcC-------------CCCCCCc
Confidence 357999999999999999999999999999999997542 23455677888888762 7899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. ....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+||+++.++
T Consensus 83 l~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g 155 (345)
T 1xjd_A 83 MFCTFQ----TKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDG 155 (345)
T ss_dssp EEEEEE----CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTS
T ss_pred EEEEEE----eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCC
Confidence 999887 667899999999 78999988765 3489999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++.... ......+||+.|+|||++.+
T Consensus 156 -------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 192 (345)
T 1xjd_A 156 -------------------------------------------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG 192 (345)
T ss_dssp -------------------------------------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred -------------------------------------------CEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcC
Confidence 49999999987542 23445678999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+|||||++|+|++|..||.+.+ .......+..
T Consensus 193 ~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~---------------------------------- 232 (345)
T 1xjd_A 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIRM---------------------------------- 232 (345)
T ss_dssp CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH----------------------------------
T ss_pred CCCCChhhhHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHh----------------------------------
Confidence 999999999999999999999999997544 2222222211
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH-HHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA-DCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-ell~hp~~~~~ 389 (393)
....++...+..+.+||.+||..||.+||++. ++++||||+++
T Consensus 233 --------~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 233 --------DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp --------CCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred --------CCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 11123344567889999999999999999998 99999999876
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=337.92 Aligned_cols=285 Identities=28% Similarity=0.462 Sum_probs=214.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.++|++.++||+|+||.||+|.+..+++.||+|++...... ...+.+|+.+++.+ .|+|++++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~ 67 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL--------------KHPNLVNL 67 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC--------------CCTTBCCE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC--------------CCCCccch
Confidence 46899999999999999999999999999999988654322 35567899999999 79999999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++.+. .....++||||+.++++..+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 68 ~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~-- 139 (311)
T 4agu_A 68 LEVFR----RKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHS-- 139 (311)
T ss_dssp EEEEE----ETTEEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTS--
T ss_pred hheee----cCCeEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCC--
Confidence 99887 566799999999555554443332 4589999999999999999999998 999999999999997666
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc-C
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~-~ 259 (393)
.++|+|||++...... .....+|+.|+|||++.+ .
T Consensus 140 -----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 178 (311)
T 4agu_A 140 -----------------------------------------VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178 (311)
T ss_dssp -----------------------------------------CEEECCCTTCEECC------------GGGCCHHHHHTCS
T ss_pred -----------------------------------------CEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCC
Confidence 4999999998765422 234578999999999987 5
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++||||||+++|+|++|..||.+.+ ..+.+..+....+..+.......... .++.... .........
T Consensus 179 ~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~- 249 (311)
T 4agu_A 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKS------DVDQLYLIRKTLGDLIPRHQQVFSTN-QYFSGVK-IPDPEDMEP- 249 (311)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHHHHHTC-GGGTTCC-CCCCSSCCC-
T ss_pred CCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhcccccccccccccc-cccccCc-CCCccccch-
Confidence 67999999999999999999999998765 66777777777777665443221111 1111100 000000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.... ....+..+.+||++||..||.+|||++|+++||||+++++
T Consensus 250 -----~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 250 -----LELK---FPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp -----HHHH---CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred -----hhhh---cccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 0000 1245677899999999999999999999999999998764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=351.45 Aligned_cols=285 Identities=28% Similarity=0.436 Sum_probs=209.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|+|+++
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpnIv~ 92 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM--------------KHENVIG 92 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC--------------CCTTBCC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC--------------CCCCCCc
Confidence 4579999999999999999999999999999999986432 2345677899999998 7899999
Q ss_pred ccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++.+.... ......++++|+++++|.+.+.. ..++...+..++.||+.||+|||+. |++||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~ 168 (367)
T 2fst_X 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNED 168 (367)
T ss_dssp CSEEECSCSSGGGCCCCEEEEECCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT
T ss_pred EEEEEecCCccccCCeEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCC
Confidence 999876321 12356899999999998888765 3489999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-C
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG-A 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~ 259 (393)
+ .+||+|||+++..........+|+.|+|||++.+ .
T Consensus 169 ~-------------------------------------------~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~ 205 (367)
T 2fst_X 169 C-------------------------------------------ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWM 205 (367)
T ss_dssp C-------------------------------------------CEEECC---------------CCCTTCCHHHHTTCC
T ss_pred C-------------------------------------------CEEEeeccccccccccCCCcCcCcCccChHHHcCCc
Confidence 6 4999999999877666666789999999999987 5
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc--cccCCCCCeeeccCCC
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL--RYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 337 (393)
.++.++|||||||++|+|++|+.||.+.+ ...++..+....|..+.+.+....... .+... .....
T Consensus 206 ~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~------~~~~~ 273 (367)
T 2fst_X 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTD------HIDQLKLILRLVGTPGAELLKKISSESARNYIQS------LTQMP 273 (367)
T ss_dssp SCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHT------SCCCC
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhc------cCCCC
Confidence 68999999999999999999999998766 778899999999988877665432110 00000 00000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...... .....+..+.+||.+||+.||.+|||+.|+|+||||+...
T Consensus 274 ~~~~~~-------~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 274 KMNFAN-------VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp CCCHHH-------HTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CCCHHH-------HCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence 000000 0123467889999999999999999999999999998764
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=352.97 Aligned_cols=272 Identities=21% Similarity=0.335 Sum_probs=206.5
Q ss_pred ccccCCeeCCeEEEE-EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 19 PVQIGDLFNFRYHVI-RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 19 ~~~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
++..+..++ +|.+. ++||+|+||.||+|.+..+++.||||++.. .....+|+.++..+. .|
T Consensus 53 ~~~~~~~~~-~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~-------------~h 114 (400)
T 1nxk_A 53 QIKKNAIID-DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRAS-------------QC 114 (400)
T ss_dssp CCBCSCGGG-TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHT-------------TS
T ss_pred ccCCCcccc-cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhc-------------CC
Confidence 344455444 56665 799999999999999999999999999874 356778888876652 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+||+++++.+........++++||||+ +++|.+.+.......+++.++..++.||+.||.|||++ ||+||||||+|||
T Consensus 115 p~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nil 193 (400)
T 1nxk_A 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLL 193 (400)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEE
T ss_pred CCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEE
Confidence 999999999886555677899999999 78999998775545689999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE 254 (393)
++.+.. ...+||+|||++..... .....+||+.|+|||
T Consensus 194 l~~~~~----------------------------------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE 233 (400)
T 1nxk_A 194 YTSKRP----------------------------------------NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233 (400)
T ss_dssp ESSSST----------------------------------------TCCEEECCCTTCEECC-----------CTTCCGG
T ss_pred EecCCC----------------------------------------CccEEEEecccccccCCCCccccCCCCCCccCHh
Confidence 976321 12599999999986543 234567899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++|||||||++|+|++|..||.+......... ....+....-..|.
T Consensus 234 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~~~----------------------- 288 (400)
T 1nxk_A 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEFPN----------------------- 288 (400)
T ss_dssp GSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCCCT-----------------------
T ss_pred hcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccCCC-----------------------
Confidence 99888899999999999999999999999976654332111 11111110000000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
......+..+.+||++||..||.+|||+.|+++||||.+.
T Consensus 289 ---------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 289 ---------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp ---------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred ---------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 0013456788999999999999999999999999999754
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=342.81 Aligned_cols=258 Identities=24% Similarity=0.365 Sum_probs=209.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|++..+++.||+|++...... ...+.+|..+++.+. .|+|++++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-------------~hp~iv~l 75 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-------------NHPFLVGL 75 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTT-------------TCTTBCCE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcC-------------CCCccCeE
Confidence 4799999999999999999999999999999999754322 344677888888762 68999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. ....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 76 ~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g- 147 (345)
T 3a8x_A 76 HSCFQ----TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG- 147 (345)
T ss_dssp EEEEE----CSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTS-
T ss_pred EEEEE----eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCC-
Confidence 99987 667899999999 78999888765 3489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|||++.... ......+||+.|+|||++.+.
T Consensus 148 ------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 185 (345)
T 3a8x_A 148 ------------------------------------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 185 (345)
T ss_dssp ------------------------------------------CEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred ------------------------------------------CEEEEeccccccccCCCCcccccCCCccccCccccCCC
Confidence 49999999987532 234456799999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCC--CcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYS--RDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.++.++|+|||||++|+|++|+.||......... .....+
T Consensus 186 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-------------------------------------- 227 (345)
T 3a8x_A 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-------------------------------------- 227 (345)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH--------------------------------------
T ss_pred CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH--------------------------------------
Confidence 9999999999999999999999999654322110 000010
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH------HHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA------ADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~ell~hp~~~~~ 389 (393)
...+......++...+..+.+||.+||..||.+||++ +|+++||||+++
T Consensus 228 ---~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 228 ---FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp ---HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred ---HHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 1112222333455667889999999999999999995 899999999875
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=351.33 Aligned_cols=252 Identities=23% Similarity=0.370 Sum_probs=210.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.++||+|+||.||+|++..+++.||+|++... ......+.+|..+++.+ .|+||++
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l--------------~hp~Iv~ 133 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--------------NSPWVVQ 133 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC--------------CCTTBCC
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC--------------CCCCCCe
Confidence 46899999999999999999999999999999998752 23345678999999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. ....+++||||+ +++|.+++... .+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 134 l~~~~~----~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g 205 (410)
T 3v8s_A 134 LFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSG 205 (410)
T ss_dssp EEEEEE----CSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTS
T ss_pred EEEEEE----ECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCC
Confidence 999987 677899999999 88999888654 489999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||++...... ....+||+.|+|||++.
T Consensus 206 -------------------------------------------~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~ 242 (410)
T 3v8s_A 206 -------------------------------------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242 (410)
T ss_dssp -------------------------------------------CEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHH
T ss_pred -------------------------------------------CEEEeccceeEeeccCCcccccCCcCCccccCHHHhh
Confidence 4999999999765432 33567999999999998
Q ss_pred cCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 258 GAG----YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 258 ~~~----~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+.. ++.++|||||||++|+|++|+.||.+.+ .......+.....
T Consensus 243 ~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~-------------------------- 290 (410)
T 3v8s_A 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKN-------------------------- 290 (410)
T ss_dssp TTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHH--------------------------
T ss_pred ccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC------hhhHHHHHHhccc--------------------------
Confidence 765 7899999999999999999999997654 3333333322110
Q ss_pred cCCCcchhHHHHhhhccCC--hhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWS--KAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
...++ ...+..+.+||++||+.+|.+ ||+++|+++||||+++
T Consensus 291 --------------~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 291 --------------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp --------------HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred --------------cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 01111 245678899999999999988 9999999999999986
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=332.79 Aligned_cols=263 Identities=25% Similarity=0.373 Sum_probs=214.2
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.+ .|+|+
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 67 (284)
T 3kk8_A 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL--------------QHPNI 67 (284)
T ss_dssp CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC--------------CCTTB
T ss_pred chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc--------------CCCCc
Confidence 4567899999999999999999999999999999999875432 235567899999999 79999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....++|||++ +++|.+.+.... .+++..+..++.|++.||+|||++ |++||||||+||+++.
T Consensus 68 ~~~~~~~~----~~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~ 140 (284)
T 3kk8_A 68 VRLHDSIQ----EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLAS 140 (284)
T ss_dssp CCEEEEEE----CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESS
T ss_pred CeEEEEEE----cCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEec
Confidence 99999887 677889999999 778888887663 489999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~ 257 (393)
++. ...++|+|||.+...... .....+|+.|+|||++.
T Consensus 141 ~~~----------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (284)
T 3kk8_A 141 KAK----------------------------------------GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180 (284)
T ss_dssp SST----------------------------------------TCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHT
T ss_pred CCC----------------------------------------CCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhc
Confidence 542 124899999998765433 23457899999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++||||||+++|+|++|..||.+.. .......+.......|..
T Consensus 181 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~------------------------- 229 (284)
T 3kk8_A 181 KDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAGAYDYPSP------------------------- 229 (284)
T ss_dssp TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCTT-------------------------
T ss_pred CCCCCcccchHHHHHHHHHHHHCCCCCCCCc------hhHHHHHHHhccccCCch-------------------------
Confidence 9989999999999999999999999997544 222222222211111110
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.....+..+.+||.+||..||.+|||++|+++||||++..+
T Consensus 230 -------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 230 -------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp -------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred -------------hhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 01244567889999999999999999999999999988764
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=341.94 Aligned_cols=290 Identities=24% Similarity=0.338 Sum_probs=218.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||+|.+..+++.||||++...........+++..++.+ .|+|++++++.+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l--------------~h~niv~~~~~~ 88 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL--------------HHPNIVQLQSYF 88 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH--------------CCTTBCCEEEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc--------------CCCCcccHHHhh
Confidence 589999999999999999999999999999999877665666777788888888 899999999998
Q ss_pred eeecC---CCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhh--hcCCeeeccCCCCceEEee-
Q psy12288 108 KIYSR---NGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLH--TQCRIIHTDIKPENILMCV- 179 (393)
Q Consensus 108 ~~~~~---~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH--~~~~i~H~dlkp~NIl~~~- 179 (393)
..... ...+.++||||+++++...+.. .....++...+..++.|++.||.||| ++ |++||||||+||+++.
T Consensus 89 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 89 YTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp EEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETT
T ss_pred hccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCC
Confidence 75432 3456899999998887766543 23345889999999999999999999 88 9999999999999985
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~ 257 (393)
++ .+||+|||++...... .....+|+.|+|||++.
T Consensus 168 ~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 204 (360)
T 3e3p_A 168 DG-------------------------------------------TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIF 204 (360)
T ss_dssp TT-------------------------------------------EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHT
T ss_pred CC-------------------------------------------cEEEeeCCCceecCCCCCcccccCCcceeCHHHHc
Confidence 44 5999999999865432 33457899999999997
Q ss_pred cCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+.. ++.++|||||||++|+|++|+.||.+.+ ....+..+....+..+.+.+............ ...
T Consensus 205 ~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 271 (360)
T 3e3p_A 205 GNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN------SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDL-------YNS 271 (360)
T ss_dssp TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGG-------GCC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC------hHHHHHHHHHHcCCCCHHHHHhcccchhhccc-------ccc
Confidence 755 7999999999999999999999998765 77788889999998888776553322111100 000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
........+ .......+..+.+||.+||+.||.+|||+.|+++||||++...
T Consensus 272 ~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 272 KGIPWSNVF---SDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CCCCHHHHT---TTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccCCccccc---chhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 000001111 1122346788999999999999999999999999999987643
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=342.60 Aligned_cols=287 Identities=25% Similarity=0.410 Sum_probs=222.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.++||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ .|+|+++++
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 82 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL--------------KHENVVNLI 82 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC--------------CCTTBCCEE
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc--------------cCCCcccHh
Confidence 58999999999999999999999999999999886432 2234667899999999 799999999
Q ss_pred ccceeec----CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 105 NDFKIYS----RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 105 ~~~~~~~----~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+.... ..++..++||||+++++...+.... ..+++.++..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~ 160 (351)
T 3mi9_A 83 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRD 160 (351)
T ss_dssp EEEEEC--------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT
T ss_pred heeeccccccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCC
Confidence 9887532 1256799999999989998886653 4589999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-------CCCCCCCCCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-------HFADEIQTRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-------~~~~~~~t~~y~aP 253 (393)
+ .++|+|||++..... ......+|+.|+||
T Consensus 161 ~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (351)
T 3mi9_A 161 G-------------------------------------------VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 197 (351)
T ss_dssp S-------------------------------------------CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCH
T ss_pred C-------------------------------------------CEEEccchhcccccccccccccccCCcccccCccCc
Confidence 6 499999999875431 12345679999999
Q ss_pred HHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++.+. .++.++|||||||++|+|++|..||.+.+ ....+..+....+..+...+........+.... .
T Consensus 198 E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~ 267 (351)
T 3mi9_A 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT------EQHQLALISQLCGSITPEVWPNVDNYELYEKLE----L 267 (351)
T ss_dssp HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSC----C
T ss_pred hhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChhhccccccchhhcccc----c
Confidence 999874 57999999999999999999999998765 777888888888888776544332221110000 0
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.. .........+.. ...+..+.+||.+||..||++|||++|+++||||.+.
T Consensus 268 ~~-~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 268 VK-GQKRKVKDRLKA-----YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp CS-SCCCCHHHHHHH-----HHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred cc-ccccCHHHHhhh-----ccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 00 001111111111 1124678899999999999999999999999999764
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=349.70 Aligned_cols=293 Identities=20% Similarity=0.269 Sum_probs=207.4
Q ss_pred CeEEEEEEeccc--CceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWG--HFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|++.++||+| +||.||+|++..+++.||||++..... ....+.+|+.+++.+ .|+||++
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~ 90 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF--------------NHPNIVP 90 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC--------------CCTTBCC
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC--------------CCCCCCc
Confidence 489999999999 999999999999999999999975432 235567899999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .+..+++||||+ +++|.+++.......+++..+..++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 91 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~ 165 (389)
T 3gni_B 91 YRATFI----ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDG 165 (389)
T ss_dssp EEEEEE----ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC
T ss_pred EeEEEE----ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCC
Confidence 999987 566899999999 78999988776556699999999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc----------CCCCCCCCCCCCc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID----------DHFADEIQTRQYR 251 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~----------~~~~~~~~t~~y~ 251 (393)
.++|+|||.+.... .......||+.|+
T Consensus 166 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 202 (389)
T 3gni_B 166 -------------------------------------------KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 202 (389)
T ss_dssp -------------------------------------------CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGS
T ss_pred -------------------------------------------CEEEcccccceeecccccccccccccccccccccccc
Confidence 49999999875431 1122347889999
Q ss_pred hhHHHhc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc-------
Q psy12288 252 SVEVLIG--AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR------- 322 (393)
Q Consensus 252 aPE~~~~--~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~------- 322 (393)
|||++.+ ..++.++|||||||++|+|++|+.||.+.+... .+..+. .+..+............
T Consensus 203 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 274 (389)
T 3gni_B 203 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ------MLLEKL--NGTVPCLLDTSTIPAEELTMSPSR 274 (389)
T ss_dssp CHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT------HHHHC---------------------------
T ss_pred CHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHh--cCCCCccccccccccccccccccc
Confidence 9999988 568999999999999999999999997655322 111111 11111100000000000
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.....+.........+.. ........+++...+..+.+||++||..||.+|||++|+|+||||++...
T Consensus 275 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 275 SVANSGLSDSLTTSTPRP-SNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp --------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred cccccccccccccCcccc-ccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 000000000000000000 00011112244566788999999999999999999999999999997653
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=341.14 Aligned_cols=255 Identities=24% Similarity=0.344 Sum_probs=205.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+||+++
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpnIv~~ 70 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML--------------NHENVVKF 70 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC--------------CCTTBCCE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC--------------CCCCCCeE
Confidence 4568999999999999999999999999999999986432 2346788999999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 71 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~- 142 (323)
T 3tki_A 71 YGHRR----EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERD- 142 (323)
T ss_dssp EEEEE----CSSEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTC-
T ss_pred EEEEe----cCCeEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCC-
Confidence 99887 677899999999 77888877544 3489999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~ 257 (393)
.++|+|||++..... ......||+.|+|||++.
T Consensus 143 ------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 180 (323)
T 3tki_A 143 ------------------------------------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180 (323)
T ss_dssp ------------------------------------------CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHH
T ss_pred ------------------------------------------CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhc
Confidence 499999999875431 233557899999999998
Q ss_pred cCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+..+ +.++|||||||++|+|++|+.||...+... ........ ....
T Consensus 181 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~~~~~-~~~~--------------------------- 227 (323)
T 3tki_A 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----QEYSDWKE-KKTY--------------------------- 227 (323)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-----HHHHHHHT-TCTT---------------------------
T ss_pred cCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHHhc-cccc---------------------------
Confidence 8775 779999999999999999999997544211 11111000 0000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.......+..+.+||.+||..||.+|||++|+++||||+..
T Consensus 228 ------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 228 ------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp ------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred ------------CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 00113456778899999999999999999999999999864
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=342.93 Aligned_cols=265 Identities=27% Similarity=0.421 Sum_probs=199.7
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
..+.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+.+++.+ .|+|++
T Consensus 47 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l--------------~h~niv 111 (349)
T 2w4o_A 47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL--------------SHPNII 111 (349)
T ss_dssp BCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC--------------CCTTBC
T ss_pred ccccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC--------------CCCCCc
Confidence 34566788999999999999999999999999999999988543 346678899999999 799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .....++||||+ +++|.+.+... ..+++.++..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 112 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~ 184 (349)
T 2w4o_A 112 KLKEIFE----TPTEISLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATP 184 (349)
T ss_dssp CEEEEEE----CSSEEEEEECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSS
T ss_pred ceeeeEe----cCCeEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecC
Confidence 9999887 667899999999 78999888664 3489999999999999999999998 99999999999999652
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhc
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~ 258 (393)
.. ...+||+|||++...... .....||+.|+|||++.+
T Consensus 185 ~~----------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 224 (349)
T 2w4o_A 185 AP----------------------------------------DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG 224 (349)
T ss_dssp ST----------------------------------------TCCEEECCCC----------------CGGGSCHHHHTT
T ss_pred CC----------------------------------------CCCEEEccCccccccCcccccccccCCCCccCHHHhcC
Confidence 11 125999999998765432 234568999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|||||||++|+|++|..||..... ....+..+.......+.
T Consensus 225 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~i~~~~~~~~~--------------------------- 272 (349)
T 2w4o_A 225 CAYGPEVDMWSVGIITYILLCGFEPFYDERG-----DQFMFRRILNCEYYFIS--------------------------- 272 (349)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-----HHHHHHHHHTTCCCCCT---------------------------
T ss_pred CCCCcccchHHHHHHHHHHHhCCCCCCCCcc-----cHHHHHHHHhCCCccCC---------------------------
Confidence 8899999999999999999999999965441 11122222111111100
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
++....+..+.+||++||..||.+|||+.|+++||||.+...
T Consensus 273 -----------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 273 -----------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp -----------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred -----------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 112345678889999999999999999999999999997654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=343.77 Aligned_cols=252 Identities=21% Similarity=0.282 Sum_probs=208.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ...+.+..|..+++.+. .|+++++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-------------~hp~iv~ 85 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-------------KPPFLTQ 85 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTT-------------CCTTBCC
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcC-------------CCCEEee
Confidence 357999999999999999999999999999999987542 22344566777666542 6899999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. ....+++||||+ +++|...+.... .+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 86 l~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g 158 (353)
T 2i0e_A 86 LHSCFQ----TMDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEG 158 (353)
T ss_dssp EEEEEE----CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTS
T ss_pred EEEEEE----cCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCC
Confidence 999887 667899999999 789999887653 489999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++.... ......+||+.|+|||++.+
T Consensus 159 -------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 195 (353)
T 2i0e_A 159 -------------------------------------------HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY 195 (353)
T ss_dssp -------------------------------------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred -------------------------------------------cEEEEeCCcccccccCCcccccccCCccccChhhhcC
Confidence 49999999987532 23445679999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|+|||||++|+|++|+.||.+.+ .......+..
T Consensus 196 ~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~---------------------------------- 235 (353)
T 2i0e_A 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIME---------------------------------- 235 (353)
T ss_dssp CCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH----------------------------------
T ss_pred CCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHHh----------------------------------
Confidence 999999999999999999999999997644 2222222222
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
....++...+..+.+||++||..||.+||+ ++++++||||+++
T Consensus 236 --------~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 236 --------HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp --------CCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred --------CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 222344556778999999999999999994 6999999999875
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=348.01 Aligned_cols=260 Identities=24% Similarity=0.384 Sum_probs=211.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+||++++
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l--------------~hpnIv~~~ 114 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL--------------HHPKLINLH 114 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC--------------CSTTBCCEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC--------------CCcCCCeEE
Confidence 3468999999999999999999999999999999987542 2345678899999888 799999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .....++||||+ +++|.+.+.... ..+++.++..++.||+.||+|||++ |++||||||+||+++.+.
T Consensus 115 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~-- 186 (387)
T 1kob_A 115 DAFE----DKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKK-- 186 (387)
T ss_dssp EEEE----CSSEEEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTT--
T ss_pred EEEE----eCCEEEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCC--
Confidence 9887 677899999999 789888876543 3589999999999999999999998 999999999999996432
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~ 261 (393)
...+||+|||++...... .....||+.|+|||++.+..+
T Consensus 187 ---------------------------------------~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 227 (387)
T 1kob_A 187 ---------------------------------------ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227 (387)
T ss_dssp ---------------------------------------CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCB
T ss_pred ---------------------------------------CCceEEEecccceecCCCcceeeeccCCCccCchhccCCCC
Confidence 124999999999866433 223468999999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|..||.+.+ ....+..+....-..+.
T Consensus 228 ~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~i~~~~~~~~~------------------------------ 271 (387)
T 1kob_A 228 GFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWEFDE------------------------------ 271 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCCCCS------------------------------
T ss_pred CCcccEeeHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCc------------------------------
Confidence 999999999999999999999997644 33333333221111110
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
......+..+.+||.+||..||.+|||+.|+++||||++..
T Consensus 272 --------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 312 (387)
T 1kob_A 272 --------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312 (387)
T ss_dssp --------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred --------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence 01134567889999999999999999999999999998754
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=351.52 Aligned_cols=255 Identities=20% Similarity=0.351 Sum_probs=210.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.++||+|+||.||+|++..+++.||+|++... ......+.+|..+++.+ .|++|++
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~--------------~hp~Iv~ 138 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG--------------DSKWITT 138 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS--------------CTTTBCC
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC--------------CCCCEEE
Confidence 46899999999999999999999999999999998752 22344578899999988 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. ....+++||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. ||+||||||+|||++.++
T Consensus 139 l~~~~~----~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 139 LHYAFQ----DDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp EEEEEE----CSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTS
T ss_pred EEEEEe----eCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCC
Confidence 999887 677899999999 889999887632 4599999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||+++..... ....+||+.|+|||++.
T Consensus 213 -------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~ 249 (437)
T 4aw2_A 213 -------------------------------------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249 (437)
T ss_dssp -------------------------------------------CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHH
T ss_pred -------------------------------------------CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHh
Confidence 4999999998765332 23357999999999997
Q ss_pred -----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHh--CCCChHHHhcCcccccccCCCCCe
Q psy12288 258 -----GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV--GPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 258 -----~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
...++.++|||||||++|+|++|+.||.+.+ ..+....+.... -..|.
T Consensus 250 ~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~~~~~~~p~------------------- 304 (437)
T 4aw2_A 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERFQFPT------------------- 304 (437)
T ss_dssp HHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCCCCS-------------------
T ss_pred hcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC------hhHHHHhhhhccccccCCc-------------------
Confidence 4568999999999999999999999997654 333333333211 11111
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCC--CcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKL--RASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~ell~hp~~~~~ 389 (393)
.....+..+.+||++||+.+|.+ ||+++|+++||||+++
T Consensus 305 --------------------~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 305 --------------------QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp --------------------SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred --------------------ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 11235678899999999998888 9999999999999876
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-45 Score=343.54 Aligned_cols=263 Identities=27% Similarity=0.422 Sum_probs=208.9
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+..+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.++..+. .|+||++
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~E~~~l~~~~-------------~hp~iv~ 80 (342)
T 2qr7_A 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYG-------------QHPNIIT 80 (342)
T ss_dssp --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---CCCHHHHHHHHHHT-------------TSTTBCC
T ss_pred ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---CChHHHHHHHHHhc-------------CCCCcCe
Confidence 3356779999999999999999999999999999999997643 34568888888873 6999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .+..+++||||+ +++|.+.+... ..+++.++..++.||+.||+|||++ |++||||||+||++..+.
T Consensus 81 ~~~~~~----~~~~~~lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~ 153 (342)
T 2qr7_A 81 LKDVYD----DGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDES 153 (342)
T ss_dssp EEEEEE----CSSEEEEEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSS
T ss_pred EEEEEE----cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCC
Confidence 999887 677899999999 78999988765 3489999999999999999999998 999999999999985432
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~ 258 (393)
.. ...+||+|||++...... ....++|+.|+|||++.+
T Consensus 154 ~~---------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 194 (342)
T 2qr7_A 154 GN---------------------------------------PESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194 (342)
T ss_dssp CS---------------------------------------GGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHH
T ss_pred CC---------------------------------------cCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcC
Confidence 10 124999999998765332 345678999999999998
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|||||||++|+|++|..||....... ....+..+.. +..+.
T Consensus 195 ~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~--~~~~~--------------------------- 242 (342)
T 2qr7_A 195 QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEILARIGS--GKFSL--------------------------- 242 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHHHHHHHHH--CCCCC---------------------------
T ss_pred CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHHHHHHHcc--CCccc---------------------------
Confidence 888999999999999999999999997533211 1222222211 11000
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+...+..+.+||++||..||.+|||+.|+++||||.+
T Consensus 243 ---------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 243 ---------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp ---------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred ---------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 00012345678899999999999999999999999999965
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=344.21 Aligned_cols=257 Identities=23% Similarity=0.392 Sum_probs=212.0
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
++..++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ .|+|
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l--------------~hp~ 76 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL--------------EHPF 76 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC--------------CCTT
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC--------------CCCC
Confidence 344578999999999999999999999999999999987432 2345677899999988 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|+++++.+. .....++||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+|||++
T Consensus 77 Iv~l~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~ 149 (384)
T 4fr4_A 77 LVNLWYSFQ----DEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLD 149 (384)
T ss_dssp BCCEEEEEE----CSSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEC
T ss_pred CCcEEEEEE----eCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEC
Confidence 999999887 667899999999 88998888764 4589999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVL 256 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~ 256 (393)
.++ .++|+|||++..... .....+||+.|+|||++
T Consensus 150 ~~g-------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~ 186 (384)
T 4fr4_A 150 EHG-------------------------------------------HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF 186 (384)
T ss_dssp TTS-------------------------------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGT
T ss_pred CCC-------------------------------------------CEEEeccceeeeccCCCceeccCCCccccCCeee
Confidence 776 499999999986532 34566899999999999
Q ss_pred hc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 257 IG---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 257 ~~---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+ ..++.++|||||||++|+|++|+.||...+... .......+
T Consensus 187 ~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~------------------------------- 232 (384)
T 4fr4_A 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTF------------------------------- 232 (384)
T ss_dssp CCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHH-------------------------------
T ss_pred ccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHH-------------------------------
Confidence 74 358999999999999999999999997544321 11111111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-HHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-AADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~ell~hp~~~~~ 389 (393)
......++...+..+.+||.+||..||.+||+ ++++++||||+++
T Consensus 233 -----------~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 233 -----------ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp -----------HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred -----------hhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 11122234556778999999999999999998 9999999999876
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=336.09 Aligned_cols=253 Identities=22% Similarity=0.335 Sum_probs=202.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
...++|++.+.||+|+||.||+|++. .+++.||+|+++... .....+.+|+.+++.+ .
T Consensus 14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~ 79 (327)
T 3a62_A 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV--------------K 79 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC--------------C
T ss_pred CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC--------------C
Confidence 33468999999999999999999986 678999999987532 2345567899999998 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+||+++++.+. .+..+++||||+ +++|.+.+.... .+++..++.++.||+.||+|||++ |++||||||+||
T Consensus 80 hp~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Ni 152 (327)
T 3a62_A 80 HPFIVDLIYAFQ----TGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENI 152 (327)
T ss_dssp CTTBCCEEEEEE----CSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTE
T ss_pred CCCccceeEEEE----cCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHe
Confidence 999999999887 567899999999 789998887653 488999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCch
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRS 252 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~a 252 (393)
+++.++ .+||+|||++..... ......||+.|+|
T Consensus 153 ll~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~a 189 (327)
T 3a62_A 153 MLNHQG-------------------------------------------HVKLTDFGLCKESIHDGTVTHTFCGTIEYMA 189 (327)
T ss_dssp EECTTS-------------------------------------------CEEECCCSCC----------CTTSSCCTTSC
T ss_pred EECCCC-------------------------------------------cEEEEeCCcccccccCCccccccCCCcCccC
Confidence 998766 499999999875422 2334578999999
Q ss_pred hHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 253 VEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 253 PE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
||++.+..++.++||||||+++|+|++|+.||.+.+ ....+..+..
T Consensus 190 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~---------------------------- 235 (327)
T 3a62_A 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN------RKKTIDKILK---------------------------- 235 (327)
T ss_dssp HHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH----------------------------
T ss_pred HhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHh----------------------------
Confidence 999999889999999999999999999999997644 2233333222
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.+||.+||..||.+|| ++.|+++||||+++
T Consensus 236 --------------~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 236 --------------CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp --------------TCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred --------------CCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 11223344567889999999999999999 88999999999875
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=356.95 Aligned_cols=270 Identities=27% Similarity=0.437 Sum_probs=215.4
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--------------ccchhhHHHHHHHH
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--------------VYADTARDEIVLLK 79 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~ 79 (393)
||.|.+ ..+..+.++|+++++||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++
T Consensus 23 ~~~~~~-~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 101 (504)
T 3q5i_A 23 PGMYVR-KKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101 (504)
T ss_dssp GGGGCC-EECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHH
T ss_pred hhheee-ccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHH
Confidence 344433 444557789999999999999999999999999999999987543 22356788999999
Q ss_pred HhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q psy12288 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~ 158 (393)
.+ .||||+++++.+. .+..+++||||+ +++|.+.+... ..+++..+..++.||+.||+|
T Consensus 102 ~l--------------~hpniv~~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~ 161 (504)
T 3q5i_A 102 SL--------------DHPNIIKLFDVFE----DKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICY 161 (504)
T ss_dssp TC--------------CCTTBCCEEEEEE----CSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHH
T ss_pred hC--------------CCCCCCeEEEEEE----cCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHH
Confidence 98 8999999999987 677899999999 77999888765 348999999999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||++ |++||||||+||+++.++. ...++|+|||++....
T Consensus 162 lH~~-~ivH~Dlkp~Nil~~~~~~----------------------------------------~~~~kl~Dfg~a~~~~ 200 (504)
T 3q5i_A 162 LHKH-NIVHRDIKPENILLENKNS----------------------------------------LLNIKIVDFGLSSFFS 200 (504)
T ss_dssp HHHT-TEECSCCSGGGEEESSTTC----------------------------------------CSSEEECCCTTCEECC
T ss_pred HHHC-CeEeCCCcHHHEEEecCCC----------------------------------------CccEEEEECCCCEEcC
Confidence 9998 9999999999999976542 1148999999997654
Q ss_pred C--CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 239 D--HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 239 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+ ....+..+.......+...+
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~-- 271 (504)
T 3q5i_A 201 KDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN------DQDIIKKVEKGKYYFDFNDW-- 271 (504)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCHHHH--
T ss_pred CCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCCCCcccc--
Confidence 3 2345679999999999874 58999999999999999999999997654 33344433332211221111
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...+..+.+||++||..||.+|||++|+|+||||+...
T Consensus 272 ------------------------------------~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 272 ------------------------------------KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp ------------------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence 23567889999999999999999999999999997654
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=341.24 Aligned_cols=280 Identities=29% Similarity=0.451 Sum_probs=217.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc------ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+|+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 74 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL--------------SHPNI 74 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC--------------CCTTB
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC--------------CCCCC
Confidence 458999999999999999999999999999999986432 1234677899999999 79999
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.+. .....++||||+++++...+.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 75 v~~~~~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~ 148 (346)
T 1ua2_A 75 IGLLDAFG----HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDEN 148 (346)
T ss_dssp CCEEEEEC----CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT
T ss_pred CeEEEEEe----eCCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCC
Confidence 99999886 566789999999889888876543 4588999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .+||+|||++...... .....+|+.|+|||++.
T Consensus 149 ~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~ 185 (346)
T 1ua2_A 149 G-------------------------------------------VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF 185 (346)
T ss_dssp C-------------------------------------------CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHT
T ss_pred C-------------------------------------------CEEEEecccceeccCCcccCCcccccccccCchHhh
Confidence 6 4999999998865432 33457899999999997
Q ss_pred cC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+. .++.++|||||||++|+|++|.+||.+.+ ....+..+....+..+...+........+... .. .
T Consensus 186 ~~~~~~~~~DiwslG~il~ell~g~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~---~ 252 (346)
T 1ua2_A 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDS------DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF----KS---F 252 (346)
T ss_dssp TCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC----CC---C
T ss_pred CCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHcCCCChhhhhhhccCcccccc----cc---c
Confidence 65 47999999999999999999999997765 66777888887777655443332221111100 00 0
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..... .......+..+.+||++||..||.+|||++|+++||||++.
T Consensus 253 ~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 253 PGIPL-------HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp CCCCH-------HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred CCCCh-------HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence 00000 00123456789999999999999999999999999999864
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=336.94 Aligned_cols=256 Identities=20% Similarity=0.278 Sum_probs=200.5
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.++|++.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++.+ .|+||+++
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~~ 69 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL--------------EHPGIVRY 69 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC--------------CCTTBCCE
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 4468999999999999999999999999999999987432 3346678999999998 78999999
Q ss_pred cccceeecC-----------------------------------------------------CCeEEEEEEeec-cccHH
Q psy12288 104 LNDFKIYSR-----------------------------------------------------NGTHICMVFEVM-GYNLL 129 (393)
Q Consensus 104 ~~~~~~~~~-----------------------------------------------------~~~~~~iv~e~~-~~~l~ 129 (393)
++.+..... ...+.++||||+ +++|.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 149 (332)
T 3qd2_B 70 FNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLK 149 (332)
T ss_dssp EEEEEECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHH
T ss_pred EEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHH
Confidence 888753221 233589999999 77998
Q ss_pred HHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCC
Q psy12288 130 RLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208 (393)
Q Consensus 130 ~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (393)
+++..... .......+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~--------------------------- 201 (332)
T 3qd2_B 150 DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDD--------------------------- 201 (332)
T ss_dssp HHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTC---------------------------
T ss_pred HHHhcccCccchhhHHHHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCC---------------------------
Confidence 88876432 1244556889999999999999998 999999999999998666
Q ss_pred CCCCCCCCCCcccccceEEEeecCccccccCC---------------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHH
Q psy12288 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDH---------------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACM 273 (393)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~ 273 (393)
.+||+|||++...... .....||+.|+|||++.+..++.++||||||++
T Consensus 202 ----------------~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 265 (332)
T 3qd2_B 202 ----------------VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI 265 (332)
T ss_dssp ----------------CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHH
T ss_pred ----------------CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHH
Confidence 4999999998765432 233468999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCC
Q psy12288 274 AFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS 352 (393)
Q Consensus 274 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (393)
+|+|++|..|+. .....+.. ..+..|...
T Consensus 266 l~el~~~~~~~~-----------~~~~~~~~~~~~~~~~~~--------------------------------------- 295 (332)
T 3qd2_B 266 LFELLYSFSTQM-----------ERVRIITDVRNLKFPLLF--------------------------------------- 295 (332)
T ss_dssp HHHHHSCCCCHH-----------HHHHHHHHHHTTCCCHHH---------------------------------------
T ss_pred HHHHHHcCCChh-----------HHHHHHHHhhccCCCccc---------------------------------------
Confidence 999999866542 11111111 112222211
Q ss_pred hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 353 KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 353 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...++.+.+||.+||..||.+|||++|+++||||+++
T Consensus 296 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 296 TQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332 (332)
T ss_dssp HHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred ccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence 2345677899999999999999999999999999875
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-45 Score=357.79 Aligned_cols=269 Identities=28% Similarity=0.450 Sum_probs=214.3
Q ss_pred CccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
++.|......+.++|++.++||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.+
T Consensus 10 ~~~~~~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l----------- 78 (486)
T 3mwu_A 10 GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL----------- 78 (486)
T ss_dssp ----CTTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-----------
T ss_pred CCccccccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-----------
Confidence 3444444456788999999999999999999999999999999998643 23346678999999999
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.|+||+++++.+. ....+++||||+ +++|.+.+.... .+++..+..++.||+.||+|||++ ||+|||||
T Consensus 79 ---~hpniv~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlk 148 (486)
T 3mwu_A 79 ---DHPNIMKLFEILE----DSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH-NIVHRDLK 148 (486)
T ss_dssp ---CCTTBCCEEEEEE----CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCS
T ss_pred ---CCCCcCeEEEEEE----cCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCc
Confidence 8999999999887 677899999999 789988887653 489999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCC
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQ 249 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~ 249 (393)
|+||+++.++. ...+||+|||++..... ......||+.
T Consensus 149 p~Nil~~~~~~----------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~ 188 (486)
T 3mwu_A 149 PENILLESKEK----------------------------------------DCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188 (486)
T ss_dssp GGGEEESSSST----------------------------------------TCCEEECSCSCTTTBCCC----CCTTGGG
T ss_pred hHHEEEecCCC----------------------------------------CCCEEEEECCcCeECCCCCccCCCcCCCC
Confidence 99999964331 12499999999876543 2345678999
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|+|||++.+. ++.++|||||||++|+|++|..||.+.+ ....+..+.......+..
T Consensus 189 y~aPE~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~----------------- 244 (486)
T 3mwu_A 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETGKYAFDLP----------------- 244 (486)
T ss_dssp GCCGGGGGSC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCSCSG-----------------
T ss_pred CCCHHHhCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCCc-----------------
Confidence 9999998764 8999999999999999999999997654 333333333211111110
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.+...+..+.+||++||..||.+|||+.|+|+||||+...
T Consensus 245 ---------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 245 ---------------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp ---------------------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred ---------------------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 0134567889999999999999999999999999997654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=330.37 Aligned_cols=289 Identities=26% Similarity=0.415 Sum_probs=227.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-CCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-QDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|++. .+++.||+|++.... .....+.+|+.+++.+... .|+|+++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----------~h~~i~~ 78 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF-----------EHPNVVR 78 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT-----------CCTTBCC
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhcc-----------CCCCeEe
Confidence 468999999999999999999995 678999999887432 2234677888888877321 6899999
Q ss_pred ccccceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+.... ......++|||+++++|.+++.......++...+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~ 157 (326)
T 1blx_A 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSG 157 (326)
T ss_dssp EEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTC
T ss_pred eeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCC
Confidence 999886432 245789999999998999998876655699999999999999999999998 999999999999997766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~ 259 (393)
.++|+|||++..... ......+|+.|+|||++.+.
T Consensus 158 -------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 194 (326)
T 1blx_A 158 -------------------------------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194 (326)
T ss_dssp -------------------------------------------CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTC
T ss_pred -------------------------------------------CEEEecCcccccccCCCCccccccccceeCHHHHhcC
Confidence 499999999876542 23456789999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++||||||+++|+|++|..||.+.+ ....+..+....+..+...+.......+........
T Consensus 195 ~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 259 (326)
T 1blx_A 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA--------- 259 (326)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC---------
T ss_pred CCCcchhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHHcCCCCcccCccccccchhhhcccCc---------
Confidence 89999999999999999999999998665 566777777777766554433221111000000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.....+....+..+.+||.+||..||.+|||+.|+++||||++...
T Consensus 260 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 260 ------QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp ------CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ------chhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 0011223456678899999999999999999999999999998754
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=345.85 Aligned_cols=255 Identities=23% Similarity=0.354 Sum_probs=208.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
..++|++.++||+|+||.||+|++..+++.||+|++.+. ......+.+|..+++.+ .|++|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~--------------~hp~Iv 124 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG--------------DRRWIT 124 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS--------------CTTTBC
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc--------------CCCCee
Confidence 346899999999999999999999999999999999753 22345678899999888 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. ....+++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 125 ~l~~~~~----~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~ 198 (412)
T 2vd5_A 125 QLHFAFQ----DENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRC 198 (412)
T ss_dssp CEEEEEE----CSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT
T ss_pred eEEEEEe----eCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCC
Confidence 9999887 677899999999 889999987643 3589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVL 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~ 256 (393)
+ .+||+|||++...... ....+||+.|+|||++
T Consensus 199 g-------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l 235 (412)
T 2vd5_A 199 G-------------------------------------------HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235 (412)
T ss_dssp S-------------------------------------------CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHH
T ss_pred C-------------------------------------------CEEEeechhheeccCCCccccceeccccCcCCHHHH
Confidence 6 4999999999765432 2245799999999999
Q ss_pred hc-------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHh--CCCChHHHhcCcccccccCCC
Q psy12288 257 IG-------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELV--GPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 257 ~~-------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--g~~p~~~~~~~~~~~~~~~~~ 327 (393)
.. ..++.++|+|||||++|+|++|+.||.+.+ .......+.... -..|.
T Consensus 236 ~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~~~p~---------------- 293 (412)
T 2vd5_A 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS------TAETYGKIVHYKEHLSLPL---------------- 293 (412)
T ss_dssp HHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCCCC-----------------
T ss_pred hhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhcccCcCCCc----------------
Confidence 83 458999999999999999999999997654 333333332211 01110
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCC---cCHHHHhcCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR---ASAADCLRHPWLNPR 389 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~ell~hp~~~~~ 389 (393)
++...+..+.+||++||+ +|.+| |+++|+++||||+++
T Consensus 294 -----------------------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 294 -----------------------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp --------------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred -----------------------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 113456788999999999 99998 599999999999876
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=330.24 Aligned_cols=265 Identities=26% Similarity=0.364 Sum_probs=205.8
Q ss_pred ccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
|-...-.+.++|++.++||+|+||.||+|.+..++..||+|++.... ...+.+.+|+.+++.+ .
T Consensus 13 ~~~~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~ 78 (285)
T 3is5_A 13 NLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL--------------D 78 (285)
T ss_dssp CCEESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC--------------C
T ss_pred cCCCCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC--------------C
Confidence 34444467789999999999999999999999999999999987543 2346788999999998 8
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
|+|++++++.+. .....++||||+ +++|.+.+... ....+++..+..++.|++.||+|||++ |++||||||+
T Consensus 79 hp~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~ 153 (285)
T 3is5_A 79 HPNIIKIFEVFE----DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPE 153 (285)
T ss_dssp CTTBCCEEEEEE----CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGG
T ss_pred CchHHhHHHhee----cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHH
Confidence 999999999887 667899999999 67998887542 124589999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCc
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYR 251 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~ 251 (393)
||+++.+.. ...++|+|||++..... ......+|+.|+
T Consensus 154 NIl~~~~~~----------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~ 193 (285)
T 3is5_A 154 NILFQDTSP----------------------------------------HSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193 (285)
T ss_dssp GEEESSSST----------------------------------------TCCEEECCCCCCCC----------CTTGGGC
T ss_pred HEEEecCCC----------------------------------------CCCEEEEeeecceecCCcccCcCcccccCcC
Confidence 999954321 12599999999876533 234457899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++. ..++.++||||||+++|+|++|+.||.+.+ .......+.......+.
T Consensus 194 aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~-------------------- 246 (285)
T 3is5_A 194 APEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS------LEEVQQKATYKEPNYAV-------------------- 246 (285)
T ss_dssp CHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCC--------------------
T ss_pred ChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC------HHHHHhhhccCCccccc--------------------
Confidence 999986 458999999999999999999999997544 11111111110000000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.....+..+.+||.+||..||.+|||+.|+++||||++
T Consensus 247 -------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 247 -------------------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp ---------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred -------------------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 00124567889999999999999999999999999986
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=339.44 Aligned_cols=267 Identities=27% Similarity=0.380 Sum_probs=213.5
Q ss_pred ccCCeeCCeEEEE-EEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 21 QIGDLFNFRYHVI-RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 21 ~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
+.++.|+++|.+. +.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+. .
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-------------~ 87 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK-------------S 87 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT-------------T
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc-------------C
Confidence 4456778899998 89999999999999999999999999987532 22456788999999883 5
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|++++++++.+. .....++||||+ +++|.+.+.......+++..+..++.|++.||+|||++ |++||||||+||
T Consensus 88 ~~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NI 162 (327)
T 3lm5_A 88 CPRVINLHEVYE----NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNI 162 (327)
T ss_dssp CTTBCCEEEEEE----CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGE
T ss_pred CCCEEEEEEEEE----eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHE
Confidence 689999999887 677899999999 77888887655445689999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchh
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aP 253 (393)
+++.... ...++|+|||++...... .....+|+.|+||
T Consensus 163 l~~~~~~----------------------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aP 202 (327)
T 3lm5_A 163 LLSSIYP----------------------------------------LGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202 (327)
T ss_dssp EESCBTT----------------------------------------BCCEEECCGGGCEEC---------CCCGGGCCH
T ss_pred EEecCCC----------------------------------------CCcEEEeeCccccccCCccccccccCCcCccCC
Confidence 9976221 114999999999866432 2345789999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+..++.++||||||+++|+|++|..||...+ .......+.......+..
T Consensus 203 E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~--------------------- 255 (327)
T 3lm5_A 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED------NQETYLNISQVNVDYSEE--------------------- 255 (327)
T ss_dssp HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCTT---------------------
T ss_pred eeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------chHHHHHHHhcccccCch---------------------
Confidence 99999999999999999999999999999997654 333333333322222111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.....+..+.+||.+||..||.+|||++|+++||||++.
T Consensus 256 -----------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 256 -----------------TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp -----------------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred -----------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 113456778899999999999999999999999999875
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=340.38 Aligned_cols=291 Identities=23% Similarity=0.315 Sum_probs=219.2
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc------------chhhHHHHHHHHHhcccCCCCccc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY------------ADTARDEIVLLKAVGRKSNVHSSA 91 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~E~~~l~~l~~~~~~~~~~ 91 (393)
..+.++|++.+.||+|+||.||+|.+.. ++.||||++...... .+.+.+|+.+++.+
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---------- 86 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF---------- 86 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC----------
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC----------
Confidence 3456799999999999999999998865 889999988643211 15678999999999
Q ss_pred ccCcccccceeccccceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 92 YNTQASEKVIRLLNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
.|+|++++++.+.... ......++|||++++++.+.+.... ..++...+..++.|++.||+|||++ |++||||
T Consensus 87 ----~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dl 160 (362)
T 3pg1_A 87 ----HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA-GVVHRDL 160 (362)
T ss_dssp ----CCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCC
T ss_pred ----CCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCC
Confidence 7999999999986543 3456899999999999999887543 4589999999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTR 248 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~ 248 (393)
||+||+++.++ .++|+|||++..... ......+|+
T Consensus 161 kp~NIl~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~ 197 (362)
T 3pg1_A 161 HPGNILLADNN-------------------------------------------DITICDFNLAREDTADANKTHYVTHR 197 (362)
T ss_dssp CGGGEEECTTC-------------------------------------------CEEECCTTC---------------CG
T ss_pred ChHHEEEcCCC-------------------------------------------CEEEEecCcccccccccccceecccc
Confidence 99999997666 499999999875432 233457899
Q ss_pred CCchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc-ccccCC
Q psy12288 249 QYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT-LRYFTP 326 (393)
Q Consensus 249 ~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~-~~~~~~ 326 (393)
.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+ ....+..+....+..+.......... ...+..
T Consensus 198 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (362)
T 3pg1_A 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST------FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR 271 (362)
T ss_dssp GGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTT
T ss_pred eecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCChHHhhhccchhhhHHHH
Confidence 9999999987 568999999999999999999999998765 67788888888887766543321110 000000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.. ... .... .........+..+.+||.+||..||.+|||+.|+++||||++...
T Consensus 272 ~~-~~~---~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 325 (362)
T 3pg1_A 272 NS-LSN---VPAR-------AWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD 325 (362)
T ss_dssp TC-CCC---CCCC-------CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred hh-ccc---CChh-------hHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence 00 000 0000 000112345678899999999999999999999999999998753
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=341.20 Aligned_cols=287 Identities=24% Similarity=0.347 Sum_probs=222.7
Q ss_pred ccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
|..++..+.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .
T Consensus 2 p~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~ 67 (353)
T 2b9h_A 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF--------------K 67 (353)
T ss_dssp CTTCCCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC--------------C
T ss_pred CcccccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC--------------c
Confidence 55677888999999999999999999999999999999999986432 2235567899999998 7
Q ss_pred cccceeccccceee-cCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIY-SRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~-~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+... .......++|||+++++|.+.+... .++...+..++.|++.||+|||++ |++||||||+||
T Consensus 68 h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Ni 143 (353)
T 2b9h_A 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNL 143 (353)
T ss_dssp CTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGE
T ss_pred CCCcCCeeeeecccccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHe
Confidence 89999998876532 1134678999999999999888763 489999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------------CC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------------FA 242 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------------~~ 242 (393)
+++.++ .++|+|||++...... ..
T Consensus 144 l~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~ 180 (353)
T 2b9h_A 144 LINSNC-------------------------------------------DLKVCDFGLARIIDESAADNSEPTGQQSGMV 180 (353)
T ss_dssp EECTTC-------------------------------------------CEEECCCTTCEECC----------------C
T ss_pred EEcCCC-------------------------------------------cEEEEecccccccccccccccCccccccchh
Confidence 997766 4999999998765321 12
Q ss_pred CCCCCCCCchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+ ....+..+....|..+..........
T Consensus 181 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (353)
T 2b9h_A 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD------YRHQLLLIFGIIGTPHSDNDLRCIES- 253 (353)
T ss_dssp CCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCSTTTTTTCCC-
T ss_pred hccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCchhcccccccc-
Confidence 3467999999999876 568999999999999999999999998765 56667777777776542111000000
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhh--------ccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEK--------YHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.......... .......+..+.+||++||..||.+|||++|+++||||+...
T Consensus 254 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 254 -----------------PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp -----------------HHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred -----------------chhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 0000000000 001134567889999999999999999999999999998764
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=337.87 Aligned_cols=265 Identities=22% Similarity=0.353 Sum_probs=191.5
Q ss_pred CCeEEEE---EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVI---RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~---~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.++|++. +.||+|+||.||+|.+..+++.||||++... ......+|+.+++.+. .|+||+++
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~-------------~h~niv~~ 71 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCE-------------GHPNIVKL 71 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTT-------------TCTTBCCE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhc-------------CCCCeeEE
Confidence 3578876 7899999999999999999999999998753 3466788999999982 49999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .....++||||+ +++|.+.+... ..+++.++..++.|++.||+|||++ |++||||||+||+++.++.
T Consensus 72 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~ 144 (325)
T 3kn6_A 72 HEVFH----DQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDEND 144 (325)
T ss_dssp EEEEE----CSSEEEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC---
T ss_pred EEEEE----cCCEEEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCC
Confidence 99987 677899999999 77999988775 4589999999999999999999998 9999999999999976542
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~ 259 (393)
...++|+|||++..... ......+|+.|+|||++.+.
T Consensus 145 ----------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 184 (325)
T 3kn6_A 145 ----------------------------------------NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN 184 (325)
T ss_dssp -----------------------------------------CEEEECCCTTCEECCC----------------------C
T ss_pred ----------------------------------------cccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCC
Confidence 12499999999875432 23345679999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHH-HHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDD-HLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~-~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.++.++||||||+++|+|++|..||............. .+..+.......+...
T Consensus 185 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------------- 239 (325)
T 3kn6_A 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA------------------------- 239 (325)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHH-------------------------
T ss_pred CCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccc-------------------------
Confidence 99999999999999999999999997655322211111 1111111000111100
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+..+.+||++||..||.+|||++|+++||||++..+
T Consensus 240 -------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~ 279 (325)
T 3kn6_A 240 -------------WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279 (325)
T ss_dssp -------------HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred -------------ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence 0235678899999999999999999999999999987643
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=355.44 Aligned_cols=257 Identities=27% Similarity=0.450 Sum_probs=206.9
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+.++|+++++||+|+||.||+|++..++..||+|++.... .....+.+|+.+++.+ .|+||++
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~ 100 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL--------------DHPNIMK 100 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC--------------CCCCCCe
Confidence 4568999999999999999999999999999999987532 3356678899999988 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .....++||||+ +++|.+.+... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 101 ~~~~~~----~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~ 173 (494)
T 3lij_A 101 LYDFFE----DKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKE 173 (494)
T ss_dssp EEEEEE----CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSS
T ss_pred EEEEEE----eCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCC
Confidence 999987 677899999999 78998888765 3489999999999999999999998 999999999999996543
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~ 259 (393)
. ...+||+|||++..... ......||+.|+|||++.+
T Consensus 174 ~----------------------------------------~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~- 212 (494)
T 3lij_A 174 K----------------------------------------DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK- 212 (494)
T ss_dssp T----------------------------------------TCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-
T ss_pred C----------------------------------------CCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcc-
Confidence 2 12499999999876543 2345679999999999864
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|||||||++|+|++|..||.+.+ ....+..+.......+...
T Consensus 213 ~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~-------------------------- 260 (494)
T 3lij_A 213 KYDEKCDVWSIGVILFILLAGYPPFGGQT------DQEILRKVEKGKYTFDSPE-------------------------- 260 (494)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCSGG--------------------------
T ss_pred cCCCchhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCchh--------------------------
Confidence 58999999999999999999999997654 3333333333222111111
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+..+.+||++||..||.+|||+.|+|+||||+.
T Consensus 261 ------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~ 297 (494)
T 3lij_A 261 ------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297 (494)
T ss_dssp ------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred ------------cccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence 1245677889999999999999999999999999975
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=352.80 Aligned_cols=258 Identities=27% Similarity=0.425 Sum_probs=213.4
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
..|....++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .
T Consensus 9 ~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l--------------~ 74 (476)
T 2y94_A 9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF--------------R 74 (476)
T ss_dssp CCSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC--------------C
T ss_pred cCCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC--------------C
Confidence 456666678999999999999999999999999999999987532 2245678899999888 8
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+||+++++.+. .....++||||+ +++|.+++... ..+++.+++.++.||+.||+|||++ |++||||||+||
T Consensus 75 HpnIv~l~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NI 147 (476)
T 2y94_A 75 HPHIIKLYQVIS----TPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENV 147 (476)
T ss_dssp CTTBCCEEEEEE----CSSEEEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGE
T ss_pred CCCCCcEEEEEE----ECCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHE
Confidence 999999999887 567899999999 88999988654 4589999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchh
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aP 253 (393)
+++.++ .+||+|||++..... .....+||+.|+||
T Consensus 148 ll~~~~-------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aP 184 (476)
T 2y94_A 148 LLDAHM-------------------------------------------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 184 (476)
T ss_dssp EECTTC-------------------------------------------CEEECCCSSCEECCTTCCBCCCCSCSTTCCH
T ss_pred EEecCC-------------------------------------------CeEEEeccchhhccccccccccCCCcCeECh
Confidence 998766 499999999886543 23456799999999
Q ss_pred HHHhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++.+..+ +.++|||||||++|+|++|..||.+.+ .......+..
T Consensus 185 E~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~---------------------------- 230 (476)
T 2y94_A 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH------VPTLFKKICD---------------------------- 230 (476)
T ss_dssp HHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS------SHHHHHHHHT----------------------------
T ss_pred hhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhc----------------------------
Confidence 99998775 789999999999999999999997544 2222222211
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+...+..+.+||++||..||.+|||++|+++||||+...
T Consensus 231 --------------~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 231 --------------GIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp --------------TCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred --------------CCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 11112334556788999999999999999999999999997643
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=335.38 Aligned_cols=266 Identities=26% Similarity=0.402 Sum_probs=208.4
Q ss_pred ccCCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHh
Q psy12288 9 YMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAV 81 (393)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l 81 (393)
..++.+..+.|...++.+.++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+|+.+++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 103 (320)
T 3a99_A 24 CNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103 (320)
T ss_dssp ----------------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHH
T ss_pred HHHhhhhccCcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhh
Confidence 3456677888899999999999999999999999999999999999999999875432 235678899999999
Q ss_pred cccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeecc--ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHh
Q psy12288 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG--YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYL 159 (393)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~l 159 (393)
.+ .|+|++++++.+. .....++|||++. ++|.+++... ..+++..+..++.|++.||+||
T Consensus 104 ~~------------~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~L 165 (320)
T 3a99_A 104 SS------------GFSGVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHC 165 (320)
T ss_dssp CS------------SSCSBCCEEEEEE----CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHH
T ss_pred cc------------CCCCceEEEEEEe----cCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHH
Confidence 43 4689999999887 6678999999983 8999988765 3489999999999999999999
Q ss_pred hhcCCeeeccCCCCceEEe-echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 160 HTQCRIIHTDIKPENILMC-VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 160 H~~~~i~H~dlkp~NIl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
|++ |++||||||+||+++ .++ .+||+|||++....
T Consensus 166 H~~-~ivH~Dlkp~NIll~~~~~-------------------------------------------~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 166 HNC-GVLHRDIKDENILIDLNRG-------------------------------------------ELKLIDFGSGALLK 201 (320)
T ss_dssp HHT-TEECCCCSGGGEEEETTTT-------------------------------------------EEEECCCTTCEECC
T ss_pred HHC-CcEeCCCCHHHEEEeCCCC-------------------------------------------CEEEeeCccccccc
Confidence 998 999999999999997 333 59999999987654
Q ss_pred CC-CCCCCCCCCCchhHHHhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 239 DH-FADEIQTRQYRSVEVLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 239 ~~-~~~~~~t~~y~aPE~~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.. .....+|+.|+|||++.+..+ +.++||||||+++|+|++|..||.... .+. .+.
T Consensus 202 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~--~~~-------- 259 (320)
T 3a99_A 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EII--RGQ-------- 259 (320)
T ss_dssp SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHH--HCC--------
T ss_pred cccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhh--ccc--------
Confidence 33 344578999999999988775 788999999999999999999995311 000 010
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..++...+..+.+||++||..||.+|||++|+++||||++..
T Consensus 260 --------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 260 --------------------------------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp --------------------------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred --------------------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 112234556788999999999999999999999999999864
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=326.99 Aligned_cols=259 Identities=25% Similarity=0.407 Sum_probs=210.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+.++|++.+.||+|+||.||+|.+..++..||+|.+... ....+.+.+|+.+++.+ .|+|++++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~ 71 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL--------------DHPNIIRL 71 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC--------------CCTTBCCE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 3567999999999999999999999999999999988754 33456788999999998 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+...++||||+ +++|.+.+.... .+++..+..++.|++.||+|||++ |++|+||||+||++..+..
T Consensus 72 ~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~ 144 (277)
T 3f3z_A 72 YETFE----DNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSP 144 (277)
T ss_dssp EEEEE----CSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSST
T ss_pred EEEEe----cCCeEEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCC
Confidence 99887 677899999999 779988887653 489999999999999999999998 9999999999999943221
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhcCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~ 260 (393)
...++|+|||++..... ......+|+.|+|||++.+.
T Consensus 145 ----------------------------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~- 183 (277)
T 3f3z_A 145 ----------------------------------------DSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL- 183 (277)
T ss_dssp ----------------------------------------TCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-
T ss_pred ----------------------------------------CCcEEEEecccceeccCccchhccCCCCCccChHHhccc-
Confidence 12599999999876543 23456789999999998765
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++||||||+++|+|++|+.||...+ .......+.......|....
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~-------------------------- 231 (277)
T 3f3z_A 184 YGPECDEWSAGVMMYVLLCGYPPFSAPT------DSEVMLKIREGTFTFPEKDW-------------------------- 231 (277)
T ss_dssp BCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCHHHH--------------------------
T ss_pred CCchhhehhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCchhh--------------------------
Confidence 8999999999999999999999997544 33333333332222222111
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+..+.++|.+||..||.+|||+.|+++||||++.
T Consensus 232 ------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 232 ------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp ------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred ------------hcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 1345788899999999999999999999999999753
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=338.91 Aligned_cols=285 Identities=28% Similarity=0.445 Sum_probs=220.6
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|+|++
T Consensus 21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv 86 (353)
T 3coi_A 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM--------------QHENVI 86 (353)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc--------------CCCCcc
Confidence 35679999999999999999999999999999999987532 2235667899999998 789999
Q ss_pred eccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 102 RLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
++++.+..... .....++|||+++++|.+.+.. .+++..+..++.|++.||+|||++ |++||||||+||+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~ 161 (353)
T 3coi_A 87 GLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNE 161 (353)
T ss_dssp CCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECT
T ss_pred cHhheEecccccccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECC
Confidence 99988863221 1124699999998888776532 389999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc-
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG- 258 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~- 258 (393)
++ .++|+|||++...........+|+.|+|||++.+
T Consensus 162 ~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~ 198 (353)
T 3coi_A 162 DC-------------------------------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSW 198 (353)
T ss_dssp TC-------------------------------------------CEEECSTTCTTC--------CCSBCCSCHHHHSCC
T ss_pred CC-------------------------------------------cEEEeecccccCCCCCccccccCcCcCCHHHHhCc
Confidence 66 4999999999876665566688999999999987
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc--ccCCCCCeeeccCC
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR--YFTPQGNFRRIDNL 336 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~ 336 (393)
..++.++||||||+++|+|++|..||.+.+ ....+..+....|..+.++......... +... ....
T Consensus 199 ~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 266 (353)
T 3coi_A 199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKD------YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS------LPQT 266 (353)
T ss_dssp SCCCTTHHHHHHHHHHHHHHHSSCSSBSSC------HHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHT------SCBC
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHh------CcCC
Confidence 568999999999999999999999998765 6777888888888888776554322100 0000 0000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.. ..........+..+.+||.+||..||.+|||++|+++||||+...
T Consensus 267 ~~-------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 267 PR-------KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp SS-------CCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred CC-------ccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 00 000112235678899999999999999999999999999998764
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=331.45 Aligned_cols=289 Identities=22% Similarity=0.366 Sum_probs=213.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.++||+|+||.||+|.+..+++.||+|+++.. ....+.+|+.+++.+. .|+|++++++.
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~-------------~~~~i~~~~~~ 99 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR-------------GGPNIITLADI 99 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHT-------------TSTTBCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcC-------------CCCCEEEeeee
Confidence 57999999999999999999999999999999998753 3567889999999993 48999999988
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+.. ......++|||++ ++++...+.. ++...+..++.|++.||+|||++ |++||||||+||+++.++.
T Consensus 100 ~~~--~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~--- 168 (330)
T 3nsz_A 100 VKD--PVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHR--- 168 (330)
T ss_dssp EEC--TTTCCEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTT---
T ss_pred ecc--CCCCceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCC---
Confidence 862 2366789999999 5676666532 88999999999999999999998 9999999999999986652
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhc-CCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIG-AGYG 262 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~ 262 (393)
.++|+|||++..... ......+|..|+|||++.+ ..++
T Consensus 169 ---------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 209 (330)
T 3nsz_A 169 ---------------------------------------KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 209 (330)
T ss_dssp ---------------------------------------EEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCC
T ss_pred ---------------------------------------EEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCC
Confidence 499999999976532 3345578999999999987 5689
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe-eeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF-RRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 341 (393)
.++|||||||++|+|++|..||..... ..+.+..+....+..+..... .+......+.... ........+.
T Consensus 210 ~~~DiwslG~il~~ll~g~~p~~~~~~-----~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~- 281 (330)
T 3nsz_A 210 YSLDMWSLGCMLASMIFRKEPFFHGHD-----NYDQLVRIAKVLGTEDLYDYI--DKYNIELDPRFNDILGRHSRKRWE- 281 (330)
T ss_dssp THHHHHHHHHHHHHHHHTCSSSSCCSS-----HHHHHHHHHHHHCHHHHHHHH--HHTTCCCCTHHHHHHCCCCCCCGG-
T ss_pred chhhHHHHHHHHHHHHhCCCCcccCCc-----hHHHHHHHHHhcCCchhhhHH--HHhccccccchhhhhhhccccchh-
Confidence 999999999999999999999954331 455566666655532111100 0000000000000 0000000000
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
... ....+...+..+.+||++||+.||.+|||++|+|+||||+++..
T Consensus 282 -~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 328 (330)
T 3nsz_A 282 -RFV--HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328 (330)
T ss_dssp -GGC--CTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred -hhc--cccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence 000 00112335788999999999999999999999999999998753
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=334.37 Aligned_cols=252 Identities=25% Similarity=0.425 Sum_probs=197.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---------------------------cchhhHHHHHHHH
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------------------------YADTARDEIVLLK 79 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~E~~~l~ 79 (393)
.++|++.+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999865421 1356788999999
Q ss_pred HhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q psy12288 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~ 158 (393)
.+ .|+|++++++.+.. ......++||||+ +++|.+... ...+++..+..++.|++.||+|
T Consensus 92 ~l--------------~h~~iv~~~~~~~~--~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~ 152 (298)
T 2zv2_A 92 KL--------------DHPNVVKLVEVLDD--PNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEY 152 (298)
T ss_dssp TC--------------CCTTBCCEEEEEEC--SSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHH
T ss_pred hC--------------CCCCCCeEEEEEEc--CCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHH
Confidence 98 79999999998862 2367899999999 566655432 2458999999999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||++ |++||||||+||+++.++ .+||+|||++....
T Consensus 153 lH~~-~ivH~Dlkp~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~ 188 (298)
T 2zv2_A 153 LHYQ-KIIHRDIKPSNLLVGEDG-------------------------------------------HIKIADFGVSNEFK 188 (298)
T ss_dssp HHHT-TEECCCCCGGGEEECTTS-------------------------------------------CEEECCCTTCEECS
T ss_pred HHHC-CeeccCCCHHHEEECCCC-------------------------------------------CEEEecCCCccccc
Confidence 9998 999999999999998766 49999999987654
Q ss_pred CC---CCCCCCCCCCchhHHHhcCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 239 DH---FADEIQTRQYRSVEVLIGAG---YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 239 ~~---~~~~~~t~~y~aPE~~~~~~---~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
.. .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.... .......+.......|
T Consensus 189 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~-- 260 (298)
T 2zv2_A 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER------IMCLHSKIKSQALEFP-- 260 (298)
T ss_dssp SSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCC--
T ss_pred cccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc------HHHHHHHHhcccCCCC--
Confidence 32 23457899999999998765 3788999999999999999999996543 1111111111000000
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
.....+..+.+||.+||..||++|||+.|+++||||+
T Consensus 261 --------------------------------------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 261 --------------------------------------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp --------------------------------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred --------------------------------------CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 0123456788999999999999999999999999985
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=348.26 Aligned_cols=305 Identities=24% Similarity=0.352 Sum_probs=211.7
Q ss_pred CeeCCeEEE-EEEecccCceEEEEEEeC--CCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 24 DLFNFRYHV-IRKLGWGHFSTVWLSWDL--QDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 24 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+.+.+.|++ .++||+|+||.||+|.+. .+++.||||++.... ....+.+|+.+++.+ .|+||
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l--------------~hpni 80 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLREL--------------KHPNV 80 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHC--------------CCTTB
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhc--------------CCCCe
Confidence 345567887 458999999999999966 468899999987543 346788999999999 79999
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSD-------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~-------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
+++++.+.. ..+..+++||||++++|.+.+.... ...+++..++.++.||+.||+|||++ ||+||||||+
T Consensus 81 v~~~~~~~~--~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~ 157 (405)
T 3rgf_A 81 ISLQKVFLS--HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPA 157 (405)
T ss_dssp CCCCEEEEE--TTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGG
T ss_pred eeEeeEEec--CCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHH
Confidence 999998852 2466899999999999988875321 12388999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQT 247 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t 247 (393)
|||+..++. ....+||+|||+++..... .....||
T Consensus 158 NIll~~~~~---------------------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 198 (405)
T 3rgf_A 158 NILVMGEGP---------------------------------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVT 198 (405)
T ss_dssp GEEECCSST---------------------------------------TTTCEEECCTTCCC----------------CC
T ss_pred HeEEecCCC---------------------------------------CCCcEEEEECCCceecCCCCcccccCCCceec
Confidence 999943311 0125999999999865432 2345789
Q ss_pred CCCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCC---CCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 248 RQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGK---EYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 248 ~~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.... ......+++..+....|..+...+....+....
T Consensus 199 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 278 (405)
T 3rgf_A 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH 278 (405)
T ss_dssp CTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTH
T ss_pred CcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcch
Confidence 9999999998854 899999999999999999999999765532 123346888899999988776544332221100
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
........... .........+. ......+..+.+||++||+.||.+|||++|+|+||||.+.
T Consensus 279 ~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~ 340 (405)
T 3rgf_A 279 STLMKDFRRNT-YTNCSLIKYME---KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340 (405)
T ss_dssp HHHHHHCCGGG-GTTCCHHHHHH---TTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred hhhhhhccccC-CCcchhhhhHh---hcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence 00000000000 00000000010 1112235678899999999999999999999999999864
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=339.31 Aligned_cols=247 Identities=25% Similarity=0.452 Sum_probs=206.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
.+.++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+|+.+++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------------- 86 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-------------- 86 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC--------------
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC--------------
Confidence 456799999999999999999999999999999999875432 334678899999998
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+||+++++.+. .....++|||++ ++ ++...+... ..+++..+..++.|++.||+|||++ |++||||||+
T Consensus 87 ~h~~Iv~~~~~~~----~~~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~ 159 (335)
T 3dls_A 87 EHANIIKVLDIFE----NQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDE 159 (335)
T ss_dssp CCTTBCCEEEEEE----CSSEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGG
T ss_pred CCCCEeeEEEEEe----eCCEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHH
Confidence 7999999999887 677899999988 44 888888665 3489999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCc
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYR 251 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~ 251 (393)
||+++.++ .+||+|||++...... .....||+.|+
T Consensus 160 NIll~~~~-------------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~ 196 (335)
T 3dls_A 160 NIVIAEDF-------------------------------------------TIKLIDFGSAAYLERGKLFYTFCGTIEYC 196 (335)
T ss_dssp GEEECTTS-------------------------------------------CEEECCCTTCEECCTTCCBCEECSCGGGC
T ss_pred HEEEcCCC-------------------------------------------cEEEeecccceECCCCCceeccCCCcccc
Confidence 99998766 4999999998765432 23456899999
Q ss_pred hhHHHhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 252 SVEVLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 252 aPE~~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
|||++.+..+ +.++||||||+++|+|++|..||.......
T Consensus 197 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------------------------------------- 237 (335)
T 3dls_A 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV--------------------------------------- 237 (335)
T ss_dssp CHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------------------------------------
T ss_pred ChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------------------------------------
Confidence 9999998876 889999999999999999999996422100
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
......+...+..+.+||.+||..||.+|||++|+++||||++.
T Consensus 238 ---------------~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 238 ---------------EAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp ---------------TTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred ---------------hhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence 00001122345678899999999999999999999999999864
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=356.85 Aligned_cols=259 Identities=23% Similarity=0.335 Sum_probs=214.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.-.++|++.++||+|+||.||+|++..+++.||+|++.... .....+.+|+.+|+.+ .|+||
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l--------------~hp~I 246 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV--------------NSRFV 246 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC--------------CCTTB
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc--------------CCCCE
Confidence 34568999999999999999999999999999999987532 2335567899999998 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. ....+++||||+ +++|...+.......+++..++.++.||+.||+|||++ ||+||||||+|||++.
T Consensus 247 v~l~~~~~----~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~ 321 (576)
T 2acx_A 247 VSLAYAYE----TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDD 321 (576)
T ss_dssp CCEEEEEE----CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT
T ss_pred eeEEEEEe----eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeC
Confidence 99999887 667899999999 88999888776545699999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~ 257 (393)
++ .+||+|||++...... ....+||+.|+|||++.
T Consensus 322 ~g-------------------------------------------~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~ 358 (576)
T 2acx_A 322 HG-------------------------------------------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVK 358 (576)
T ss_dssp TS-------------------------------------------CEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHT
T ss_pred CC-------------------------------------------CeEEEecccceecccCccccccCCCccccCHHHHc
Confidence 76 4999999999865432 23468999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|||||||++|+|++|..||....... ....+.....
T Consensus 359 ~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~---~~~~i~~~i~--------------------------------- 402 (576)
T 2acx_A 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI---KREEVERLVK--------------------------------- 402 (576)
T ss_dssp TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC---CHHHHHHHHH---------------------------------
T ss_pred CCCCCccchHHHHHHHHHHHHhCCCCCcccccch---hHHHHHHHhh---------------------------------
Confidence 9889999999999999999999999997654321 1111111111
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||+.||.+|| +++|+++||||+++
T Consensus 403 --------~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 403 --------EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp --------HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred --------cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 111223445677899999999999999999 79999999999975
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=341.09 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=207.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc------cccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD------QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.+ .|+
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp 88 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL--------------HHP 88 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC--------------CCT
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC--------------CCC
Confidence 3467999999999999999999999999999999998643 23346778899999999 799
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------------------------------CCC
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------------------------------YKG 139 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------------------------------~~~ 139 (393)
||+++++.+. .....++||||+ +++|.+.+.... ...
T Consensus 89 niv~~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
T 3hko_A 89 NIARLYEVYE----DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFV 164 (345)
T ss_dssp TBCCEEEEEE----CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHH
T ss_pred Ccceeehhhc----cCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999987 677899999999 889888774210 111
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCc
Q psy12288 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPAN 219 (393)
Q Consensus 140 l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (393)
+++..+..++.|++.||+|||++ |++||||||+||+++.++.
T Consensus 165 ~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~------------------------------------- 206 (345)
T 3hko_A 165 QREKLISNIMRQIFSALHYLHNQ-GICHRDIKPENFLFSTNKS------------------------------------- 206 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSS-------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEecCCC-------------------------------------
Confidence 35677889999999999999998 9999999999999975541
Q ss_pred ccccceEEEeecCccccccC-------CCCCCCCCCCCchhHHHhc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCC
Q psy12288 220 EVYDISVKIADLGNACWIDD-------HFADEIQTRQYRSVEVLIG--AGYGPAADIWSTACMAFELATGDYLFDPKAGK 290 (393)
Q Consensus 220 ~~~~~~~kl~dfg~~~~~~~-------~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~ 290 (393)
..++|+|||++..... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.+.+
T Consensus 207 ----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-- 280 (345)
T 3hko_A 207 ----FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN-- 280 (345)
T ss_dssp ----CCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--
T ss_pred ----ceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--
Confidence 1499999999875432 1234578999999999976 568999999999999999999999997654
Q ss_pred CCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccC
Q psy12288 291 EYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVN 370 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 370 (393)
..+....+.......+.. .....+..+.+||.+||..|
T Consensus 281 ----~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 281 ----DADTISQVLNKKLCFENP--------------------------------------NYNVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp ----HHHHHHHHHHCCCCTTSG--------------------------------------GGGGSCHHHHHHHHHHSCSC
T ss_pred ----hHHHHHHHHhcccccCCc--------------------------------------ccccCCHHHHHHHHHHcCCC
Confidence 333333332211111110 01234678889999999999
Q ss_pred CCCCcCHHHHhcCCCCCCCCCC
Q psy12288 371 QKLRASAADCLRHPWLNPRRSH 392 (393)
Q Consensus 371 P~~Rpt~~ell~hp~~~~~~~~ 392 (393)
|.+|||+.|+++||||++..+.
T Consensus 319 p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 319 VDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp TTTSCCHHHHHHSHHHHTTSSC
T ss_pred hhHCCCHHHHhcChhhccChHh
Confidence 9999999999999999987654
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=331.94 Aligned_cols=270 Identities=24% Similarity=0.363 Sum_probs=204.7
Q ss_pred CCeeCCeEEEE-EEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 23 GDLFNFRYHVI-RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 23 ~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+..+.++|++. +.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+. .|+|+
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~-------------~h~~i 73 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-------------GHRNV 73 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTC-------------CCTTB
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhc-------------CCCCe
Confidence 34567799996 78999999999999999999999999987543 33466789999998862 79999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....++||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ |++||||||+||+++.
T Consensus 74 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~ 146 (316)
T 2ac3_A 74 LELIEFFE----EEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEH 146 (316)
T ss_dssp CCEEEEEE----ETTEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESC
T ss_pred eeEEEEEe----eCCEEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEcc
Confidence 99999887 566899999999 68999988765 3489999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------CCCCCCCCCC
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----------HFADEIQTRQ 249 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----------~~~~~~~t~~ 249 (393)
++. ...++|+|||++..... ......||+.
T Consensus 147 ~~~----------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~ 186 (316)
T 2ac3_A 147 PNQ----------------------------------------VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186 (316)
T ss_dssp SSS----------------------------------------SCSEEECCTTCCC-------------------CCSGG
T ss_pred CCC----------------------------------------cCceEEEEccCccccccCCccccccccccccccCCcC
Confidence 552 11389999999875421 1223458999
Q ss_pred CchhHHHhc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHH-----HHHHHHHHhCCCChHHHhcCcc
Q psy12288 250 YRSVEVLIG-----AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDD-----HLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 250 y~aPE~~~~-----~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~-----~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
|+|||++.+ ..++.++|||||||++|+|++|+.||.+.......-... ....+.
T Consensus 187 y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------- 250 (316)
T 2ac3_A 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF---------------- 250 (316)
T ss_dssp GCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH----------------
T ss_pred ccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH----------------
Confidence 999999975 447899999999999999999999998665432110000 000000
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCC----hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWS----KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+......++ ...+..+.+||++||..||.+|||+.|+++||||++..
T Consensus 251 ----------------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 251 ----------------------ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp ----------------------HHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred ----------------------HHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 00111111112 13467889999999999999999999999999998753
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=350.52 Aligned_cols=252 Identities=22% Similarity=0.331 Sum_probs=201.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
..++|++.++||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|+|++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv 211 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--------------RHPFLT 211 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC--------------SCTTSC
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC--------------CCCeEe
Confidence 3468999999999999999999999999999999987532 1223445566555555 799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCeeeccCCCCceEEee
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT-QCRIIHTDIKPENILMCV 179 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~-~~~i~H~dlkp~NIl~~~ 179 (393)
++++.+. ....+++||||+ +++|...+.... .+++..+..++.||+.||+|||+ . ||+||||||+|||++.
T Consensus 212 ~l~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~ 284 (446)
T 4ejn_A 212 ALKYSFQ----THDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDK 284 (446)
T ss_dssp CEEEEEE----ETTEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECS
T ss_pred eEEEEEe----eCCEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECC
Confidence 9999887 566799999999 778888887653 48999999999999999999998 7 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~ 256 (393)
++ .+||+|||++.... ......+||+.|+|||++
T Consensus 285 ~~-------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~ 321 (446)
T 4ejn_A 285 DG-------------------------------------------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321 (446)
T ss_dssp SS-------------------------------------------CEEECCCCCCCTTCC-----CCSSSCGGGCCHHHH
T ss_pred CC-------------------------------------------CEEEccCCCceeccCCCcccccccCCccccCHhhc
Confidence 76 49999999987532 224456799999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++|||||||++|+|++|+.||...+ .......+..
T Consensus 322 ~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~-------------------------------- 363 (446)
T 4ejn_A 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILM-------------------------------- 363 (446)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--------------------------------
T ss_pred CCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHHh--------------------------------
Confidence 99999999999999999999999999997544 2222222211
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.+||.+||..||.+|| +++|+++||||+++
T Consensus 364 ----------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 364 ----------EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp ----------CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred ----------CCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 12223445667889999999999999999 99999999999986
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=340.86 Aligned_cols=259 Identities=25% Similarity=0.376 Sum_probs=204.7
Q ss_pred eCCeEEE--EEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHV--IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~--~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++..|++ .+.||+|+||.||+|.+..+++.||+|+++... ...+.+.+|+.+++.+ .|+||++
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--------------~hpnIv~ 150 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL--------------DHANLIQ 150 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC--------------CCCCCCe
Confidence 3445665 678999999999999999999999999987543 3346678999999988 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .....++||||+ +++|.+.+.... ..+++..+..++.||+.||+|||++ |++||||||+|||+..+.
T Consensus 151 ~~~~~~----~~~~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~ 224 (373)
T 2x4f_A 151 LYDAFE----SKNDIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRD 224 (373)
T ss_dssp EEEEEE----CSSEEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETT
T ss_pred EEEEEE----ECCEEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCC
Confidence 999887 667899999999 778888776532 3488999999999999999999998 999999999999996433
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~ 259 (393)
. ..+||+|||++...... .....||+.|+|||++.+.
T Consensus 225 ~-----------------------------------------~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~ 263 (373)
T 2x4f_A 225 A-----------------------------------------KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263 (373)
T ss_dssp T-----------------------------------------TEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTC
T ss_pred C-----------------------------------------CcEEEEeCCCceecCCccccccccCCCcEeChhhccCC
Confidence 1 25999999999865432 3345689999999999988
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|||||||++|+|++|..||.+.+ ....+..+.......+...
T Consensus 264 ~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~~~-------------------------- 311 (373)
T 2x4f_A 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDN------DAETLNNILACRWDLEDEE-------------------------- 311 (373)
T ss_dssp BCCHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCSCSGG--------------------------
T ss_pred CCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhccCCCChhh--------------------------
Confidence 89999999999999999999999997654 3444444443222211100
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+..+.+||.+||..||.+|||+.|+++||||++.
T Consensus 312 ------------~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 312 ------------FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp ------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ------------hccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 12345788999999999999999999999999999864
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-44 Score=352.09 Aligned_cols=257 Identities=23% Similarity=0.310 Sum_probs=212.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.++||+|+||.||+|++..+++.||+|++.... .....+.+|..+++.+ .|++|++
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l--------------~hp~Iv~ 249 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV--------------HSRFIVS 249 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC--------------CCTTBCC
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc--------------CCCCEee
Confidence 468999999999999999999999999999999987532 2235677899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++.+. ....+++||||+ +++|...+.... ...+++..++.++.||+.||+|||++ ||+||||||+|||++.
T Consensus 250 l~~~~~----~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~ 324 (543)
T 3c4z_A 250 LAYAFE----TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDD 324 (543)
T ss_dssp EEEEEE----CSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT
T ss_pred EEEEEe----eCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeC
Confidence 999887 667899999999 789988886543 34589999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .+||+|||++...... ....+||+.|+|||++
T Consensus 325 ~g-------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l 361 (543)
T 3c4z_A 325 DG-------------------------------------------NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361 (543)
T ss_dssp TS-------------------------------------------CEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHH
T ss_pred CC-------------------------------------------CEEEeecceeeeccCCCcccccccCCccccChhhh
Confidence 76 4999999999865432 2335899999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++|+|||||++|+|++|+.||...+.... .......
T Consensus 362 ~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~----------------------------------- 404 (543)
T 3c4z_A 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQR----------------------------------- 404 (543)
T ss_dssp TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHH-----------------------------------
T ss_pred cCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHH-----------------------------------
Confidence 999999999999999999999999999976542210 1111111
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
+......++...+..+.+||++||+.||.+||+ ++++++||||+++
T Consensus 405 -------i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 405 -------VLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp -------HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred -------HhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 112222344566788899999999999999996 5899999999975
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=326.77 Aligned_cols=252 Identities=25% Similarity=0.420 Sum_probs=206.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+|+++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 73 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL--------------RHPNILR 73 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC--------------CCCCCcc
Confidence 468999999999999999999999999999999986432 2245577888888888 7999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .....++||||+ +++|.+.+... ..++...+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 74 ~~~~~~----~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~ 146 (279)
T 3fdn_A 74 LYGYFH----DATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAG 146 (279)
T ss_dssp EEEEEE----CSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTS
T ss_pred hhheEe----cCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCC
Confidence 999887 667899999999 67888888765 3489999999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||.+.+..
T Consensus 147 -------------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 183 (279)
T 3fdn_A 147 -------------------------------------------ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 183 (279)
T ss_dssp -------------------------------------------CEEECSCCEESCC--------CCCCTTCCHHHHTTCC
T ss_pred -------------------------------------------CEEEEeccccccCCcccccccCCCCCccCHhHhccCC
Confidence 4999999988655332 34457899999999999988
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++||||||+++|+|++|..||...+ .......+...
T Consensus 184 ~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~----------------------------------- 222 (279)
T 3fdn_A 184 HDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRV----------------------------------- 222 (279)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHT-----------------------------------
T ss_pred CCccchhHhHHHHHHHHHHCCCCCCCCc------HHHHHHHHHhC-----------------------------------
Confidence 9999999999999999999999997544 22222222221
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
...++...+..+.+||.+||..||.+|||++|+++||||++..
T Consensus 223 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~ 265 (279)
T 3fdn_A 223 -------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265 (279)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred -------CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence 1123344567888999999999999999999999999997643
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=325.52 Aligned_cols=262 Identities=25% Similarity=0.427 Sum_probs=209.9
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
++.++|++.+.||+|+||.||+|.+..+++.||+|+++.... ..+.+.+|+.+++.+ .|
T Consensus 2 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h 67 (283)
T 3bhy_A 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI--------------RH 67 (283)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC--------------CC
T ss_pred chhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC--------------CC
Confidence 456789999999999999999999999999999999875421 245678999999999 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+|++++++.+. .....++|||++ +++|.+++... ..++...+..++.|++.||++||++ |++|+||||+||+
T Consensus 68 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil 140 (283)
T 3bhy_A 68 PNIITLHDIFE----NKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIM 140 (283)
T ss_dssp TTBCCEEEEEE----CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEE
T ss_pred CCeeehhheec----CCCeEEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEE
Confidence 99999999887 567899999999 78999988765 3489999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE 254 (393)
++.++. ....++|+|||++..... ......+|+.|+|||
T Consensus 141 ~~~~~~---------------------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE 181 (283)
T 3bhy_A 141 LLDKNV---------------------------------------PNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181 (283)
T ss_dssp ESCSSS---------------------------------------SSCCEEECCCTTCEECC--------CCCGGGCCHH
T ss_pred EecCCC---------------------------------------CCCceEEEecccceeccCCCcccccCCCcCccCcc
Confidence 976541 012499999999876543 233456899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++||||||+++|+|++|..||...+ ....+..+.......+...
T Consensus 182 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~--------------------- 234 (283)
T 3bhy_A 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGET------KQETLTNISAVNYDFDEEY--------------------- 234 (283)
T ss_dssp HHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCCCCCHHH---------------------
T ss_pred eecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc------hHHHHHHhHhcccCCcchh---------------------
Confidence 9998889999999999999999999999997644 2233332222211111111
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+..+.++|.+||..||.+|||+.|+++||||++.+
T Consensus 235 -----------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 235 -----------------FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp -----------------HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred -----------------cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 023456788999999999999999999999999998653
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=327.88 Aligned_cols=270 Identities=25% Similarity=0.358 Sum_probs=210.3
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
+..|.++..+..+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l----------- 73 (302)
T 2j7t_A 5 SREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC----------- 73 (302)
T ss_dssp -----CCBSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-----------
T ss_pred chhhcccccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-----------
Confidence 4567777888888999999999999999999999999999999999986432 3346778899999998
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.|+|++++++.+. .....++|||++ ++++.+.+.... ..++...+..++.|++.||+|||++ |++|+|||
T Consensus 74 ---~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk 144 (302)
T 2j7t_A 74 ---DHPYIVKLLGAYY----HDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLK 144 (302)
T ss_dssp ---CCTTBCCEEEEEE----CC-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCS
T ss_pred ---CCCCEeeeeeeee----eCCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCC
Confidence 7999999999887 566799999999 677777766533 4589999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCC
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTR 248 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~ 248 (393)
|+||+++.++ .++|+|||++.... .......+|+
T Consensus 145 p~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 181 (302)
T 2j7t_A 145 AGNVLMTLEG-------------------------------------------DIRLADFGVSAKNLKTLQKRDSFIGTP 181 (302)
T ss_dssp GGGEEECTTS-------------------------------------------CEEECCCHHHHHHHHHHHC-----CCG
T ss_pred HHHEEECCCC-------------------------------------------CEEEEECCCCccccccccccccccCCh
Confidence 9999997666 49999999875432 2233456899
Q ss_pred CCchhHHHh-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 249 QYRSVEVLI-----GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 249 ~y~aPE~~~-----~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
.|+|||++. +..++.++||||||+++|+|++|..||...+ .......+.. +..+.
T Consensus 182 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~~------------ 241 (302)
T 2j7t_A 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAK--SDPPT------------ 241 (302)
T ss_dssp GGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SCCCC------------
T ss_pred hhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHhc--cCCcc------------
Confidence 999999984 5568899999999999999999999997544 2222222211 11000
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...+...+..+.++|.+||..||.+|||+.|+++||||++...
T Consensus 242 -------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 284 (302)
T 2j7t_A 242 -------------------------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 284 (302)
T ss_dssp -------------------------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred -------------------------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhcc
Confidence 0012345667889999999999999999999999999998764
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=354.78 Aligned_cols=264 Identities=28% Similarity=0.426 Sum_probs=213.4
Q ss_pred ccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccC
Q psy12288 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
....+..+.++|++.++||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+
T Consensus 17 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l------------- 83 (484)
T 3nyv_A 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------------- 83 (484)
T ss_dssp --CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-------------
T ss_pred eccCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-------------
Confidence 4455667888999999999999999999999999999999998643 23346678999999988
Q ss_pred cccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 95 ~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+||+++++.+. .....++|||++ +++|.+.+... ..+++..+..++.|++.||+|||++ |++||||||+
T Consensus 84 -~hpniv~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~ 155 (484)
T 3nyv_A 84 -DHPNIMKLYEFFE----DKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPE 155 (484)
T ss_dssp -CCTTBCCEEEEEE----CSSEEEEEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGG
T ss_pred -CCCCCCcEEEEEE----eCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHH
Confidence 8999999999887 677899999999 88999888765 3489999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCc
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYR 251 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~ 251 (393)
||+++.+.. ...+||+|||++...... .....||+.|+
T Consensus 156 Nil~~~~~~----------------------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~ 195 (484)
T 3nyv_A 156 NLLLESKSK----------------------------------------DANIRIIDFGLSTHFEASKKMKDKIGTAYYI 195 (484)
T ss_dssp GEEESSSST----------------------------------------TCCEEECCTTHHHHBCCCCSHHHHTTGGGTC
T ss_pred HEEEecCCC----------------------------------------CCcEEEEeeeeeEEcccccccccCCCCcccc
Confidence 999953221 125999999998765432 22346899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++.+ .++.++|||||||++|+|++|..||.+.+ ....+..+.......+..
T Consensus 196 aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~------------------- 249 (484)
T 3nyv_A 196 APEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN------EYDILKKVEKGKYTFELP------------------- 249 (484)
T ss_dssp CHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCSG-------------------
T ss_pred CceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCCCCc-------------------
Confidence 9999977 58999999999999999999999997654 333333333211111110
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.+...+..+.+||++||..||.+|||+.|+|+||||+.
T Consensus 250 -------------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~ 287 (484)
T 3nyv_A 250 -------------------QWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287 (484)
T ss_dssp -------------------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred -------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcc
Confidence 11345678899999999999999999999999999975
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=332.55 Aligned_cols=254 Identities=24% Similarity=0.411 Sum_probs=199.8
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+++|++.+.||+|+||.||+|.+. +++.||||++..... ..+.+.+|+.+++.+.+ .++|+++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~------------~~~~iv~ 73 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ------------HSDKIIR 73 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT------------TCTTBCC
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh------------cCCceEE
Confidence 4679999999999999999999874 688999999875432 23567889999999943 2388999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++.+. .+...++|||+.+++|.+++... ..+++.++..++.|++.||+|||++ ||+||||||+|||++. +
T Consensus 74 ~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~~-~- 144 (343)
T 3dbq_A 74 LYDYEI----TDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-G- 144 (343)
T ss_dssp EEEEEE----CSSEEEEEECCCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET-T-
T ss_pred EeeeEe----eCCEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEEC-C-
Confidence 998887 67789999998899999999875 3589999999999999999999998 9999999999999963 3
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||++...... .....||+.|+|||++.
T Consensus 145 ------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 182 (343)
T 3dbq_A 145 ------------------------------------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182 (343)
T ss_dssp ------------------------------------------EEEECCCSSSCCC------------CCCCSSCCHHHHH
T ss_pred ------------------------------------------cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHh
Confidence 4999999999765432 22457899999999997
Q ss_pred c-----------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 258 G-----------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 258 ~-----------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
+ ..++.++|||||||++|+|++|+.||..... ....+.......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~~~~~~~----------------- 237 (343)
T 3dbq_A 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------QISKLHAIIDPN----------------- 237 (343)
T ss_dssp HCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS--------HHHHHHHHHCTT-----------------
T ss_pred hccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh--------HHHHHHHHhcCC-----------------
Confidence 5 5678999999999999999999999964321 111121211110
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....++...+..+.+||.+||..||.+|||+.|+++||||..
T Consensus 238 --------------------~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 238 --------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp --------------------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred --------------------cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 011123344567889999999999999999999999999964
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=342.42 Aligned_cols=295 Identities=23% Similarity=0.362 Sum_probs=212.4
Q ss_pred ccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
+..+|+...++|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.+ .
T Consensus 24 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l--------------~ 89 (360)
T 3eqc_A 24 KQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC--------------N 89 (360)
T ss_dssp HHTCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC--------------C
T ss_pred hhcccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC--------------C
Confidence 3567888899999999999999999999999999999999998754 22345667888888877 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+. .+...++||||+ +++|.+++.... .++...+..++.|++.||+|||+..|++||||||+||
T Consensus 90 h~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Ni 163 (360)
T 3eqc_A 90 SPYIVGFYGAFY----SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163 (360)
T ss_dssp CTTBCCEEEEEE----ETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGE
T ss_pred CCCEEEEeEEEE----ECCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHE
Confidence 999999999887 566799999999 679999887653 4889999999999999999999843899999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-CCCCCCCCCCCCchhH
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-DHFADEIQTRQYRSVE 254 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~t~~y~aPE 254 (393)
+++.++ .++|+|||++.... .......||+.|+|||
T Consensus 164 l~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE 200 (360)
T 3eqc_A 164 LVNSRG-------------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 200 (360)
T ss_dssp EECTTC-------------------------------------------CEEECCCCCCHHHHHHC----CCCCTTCCHH
T ss_pred EECCCC-------------------------------------------CEEEEECCCCcccccccccCCCCCCCeECHH
Confidence 998766 49999999986543 2234457899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH--HhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE--LVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
++.+..++.++||||||+++|+|++|+.||...+. .. +..+.. ..+..+.... ........+....
T Consensus 201 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---- 268 (360)
T 3eqc_A 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA------KE-LELMFGCQVEGDAAETPP-RPRTPGRPLNKFG---- 268 (360)
T ss_dssp HHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH------HH-HHHHHC------------------------------
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HH-HHHHhcccccccCCCCCC-CcccCCCcccccc----
Confidence 99999999999999999999999999999975441 11 111111 1111110000 0000000000000
Q ss_pred ccCCCcchhHH----HHhhhc-c-CChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQ----VLTEKY-H-WSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~----~~~~~~-~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
........... +..... . .+...+..+.+||++||..||++|||++|+++||||+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 330 (360)
T 3eqc_A 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330 (360)
T ss_dssp -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence 00000011111 111111 1 11235778999999999999999999999999999975
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=330.01 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=205.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.|+..+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+ .|+|++++++.+
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv~~~~~~ 111 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY--------------QHFNVVEMYKSY 111 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC--------------CCTTBCCEEEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC--------------CCCCcceEEEEE
Confidence 5888999999999999999999999999999987543 2345678899999888 799999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....++||||+ +++|.+.+.. ..+++..+..++.|++.||+|||+. |++||||||+||+++.++
T Consensus 112 ~----~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~----- 178 (321)
T 2c30_A 112 L----VGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDG----- 178 (321)
T ss_dssp E----ETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC-----
T ss_pred E----ECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC-----
Confidence 7 456799999999 7788887654 3489999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCCCCc
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAGYGP 263 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~ 263 (393)
.++|+|||++...... .....||+.|+|||++.+..++.
T Consensus 179 --------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 220 (321)
T 2c30_A 179 --------------------------------------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYAT 220 (321)
T ss_dssp --------------------------------------CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred --------------------------------------cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCc
Confidence 4999999998765432 33457899999999999988999
Q ss_pred hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHH
Q psy12288 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQ 343 (393)
Q Consensus 264 ~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (393)
++||||||+++|+|++|+.||...+ .......+... ..|.
T Consensus 221 ~~Dv~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~--~~~~-------------------------------- 260 (321)
T 2c30_A 221 EVDIWSLGIMVIEMVDGEPPYFSDS------PVQAMKRLRDS--PPPK-------------------------------- 260 (321)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS--SCCC--------------------------------
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhcC--CCCC--------------------------------
Confidence 9999999999999999999997543 22222222111 1000
Q ss_pred HHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 344 VLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.......+..+.++|.+||..||++|||++|+++||||...
T Consensus 261 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 261 -----LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp -----CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred -----cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 00112345678899999999999999999999999999754
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=335.89 Aligned_cols=253 Identities=19% Similarity=0.302 Sum_probs=201.6
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch----hhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD----TARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
-.++|++.+.||+|+||.||+|++..+++.||+|++.+...... .+..|..++ .....|++|+
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l-------------l~~~~hp~Iv 102 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL-------------LKNVKHPFLV 102 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC-------------BCCCCCTTBC
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH-------------HHhCCCCCCC
Confidence 34689999999999999999999999999999999976432211 112222211 1123899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. ....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 103 ~l~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~ 175 (373)
T 2r5t_A 103 GLHFSFQ----TADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQ 175 (373)
T ss_dssp CEEEEEE----CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT
T ss_pred CEEEEEE----eCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCC
Confidence 9999987 677899999999 78999888765 3488999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~ 257 (393)
+ .+||+|||++.... ......+||+.|+|||++.
T Consensus 176 g-------------------------------------------~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~ 212 (373)
T 2r5t_A 176 G-------------------------------------------HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212 (373)
T ss_dssp S-------------------------------------------CEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHT
T ss_pred C-------------------------------------------CEEEeeCccccccccCCCccccccCCccccCHHHhC
Confidence 6 49999999987532 2334567999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|+|||||++|+|++|..||.+.+ .......+..
T Consensus 213 ~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~--------------------------------- 253 (373)
T 2r5t_A 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILN--------------------------------- 253 (373)
T ss_dssp TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHHHH---------------------------------
T ss_pred CCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHh---------------------------------
Confidence 9999999999999999999999999997544 2222222221
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH----HHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA----ADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~ell~hp~~~~~ 389 (393)
....++...+..+.+||.+||+.||.+||++ .++++||||+++
T Consensus 254 ---------~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 254 ---------KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp ---------SCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred ---------cccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 1222334566788999999999999999986 699999999875
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=333.60 Aligned_cols=291 Identities=22% Similarity=0.356 Sum_probs=212.8
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.|..++++|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|+
T Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 70 (320)
T 2i6l_A 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL--------------DHDNI 70 (320)
T ss_dssp -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC--------------CCTTB
T ss_pred ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc--------------CCCCe
Confidence 35678889999999999999999999999999999999887432 3346678899999998 78888
Q ss_pred eeccccceee----------cCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 101 IRLLNDFKIY----------SRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 101 ~~~~~~~~~~----------~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
+++++.+... .......++||||++++|.+.+.. ..++...++.++.|++.||+|||++ |++||||
T Consensus 71 v~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl 146 (320)
T 2i6l_A 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDL 146 (320)
T ss_dssp CCEEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCC
T ss_pred eEEEEeccccccccccccccccccCceeEEeeccCCCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC-CEecCCC
Confidence 8888766321 124567999999998899988854 3488999999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADE 244 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~ 244 (393)
||+||+++.++. .++|+|||++...... ....
T Consensus 147 kp~Nil~~~~~~------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~ 184 (320)
T 2i6l_A 147 KPANLFINTEDL------------------------------------------VLKIGDFGLARIMDPHYSHKGHLSEG 184 (320)
T ss_dssp SGGGEEEETTTT------------------------------------------EEEECCCTTCBCC--------CCCGG
T ss_pred CHHHEEEcCCCC------------------------------------------eEEEccCccccccCCCcccccccccc
Confidence 999999974331 5999999998765321 2234
Q ss_pred CCCCCCchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 245 IQTRQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 245 ~~t~~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
.+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+.+ ....+..+....+................
T Consensus 185 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (320)
T 2i6l_A 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH------ELEQMQLILESIPVVHEEDRQELLSVIPV 258 (320)
T ss_dssp GSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHSCCCCHHHHHHHHTTSCH
T ss_pred cccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCchhhhhhhhhcCcc
Confidence 56899999999876 568999999999999999999999998655 45555666555554444332221111000
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
+... . ..... .....+....+..+.+||++||..||.+|||++|+++||||+...
T Consensus 259 ~~~~----~-~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (320)
T 2i6l_A 259 YIRN----D-MTEPH-------KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313 (320)
T ss_dssp HHHH----H-TTSCC-------CCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred cccc----c-ccCCC-------CChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence 0000 0 00000 000011234567899999999999999999999999999998653
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=330.59 Aligned_cols=287 Identities=19% Similarity=0.287 Sum_probs=214.2
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+..++++|++.++||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+ .|+|+
T Consensus 4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 69 (319)
T 4euu_A 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--------------NHKNI 69 (319)
T ss_dssp EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC--------------CCTTB
T ss_pred ccCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc--------------CCCCc
Confidence 4567789999999999999999999999999999999987543 2245667999999999 79999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
+++++.+.. ......++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ |++||||||+||++.
T Consensus 70 v~~~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~ 146 (319)
T 4euu_A 70 VKLFAIEEE--TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRV 146 (319)
T ss_dssp CCEEEEEEC--TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEE
T ss_pred ceEEEEeec--CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEe
Confidence 999988762 2345789999999 7899988876432 2389999999999999999999998 999999999999983
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVL 256 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~ 256 (393)
.+.. ....+||+|||++...... .....+|+.|+|||++
T Consensus 147 ~~~~---------------------------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 187 (319)
T 4euu_A 147 IGED---------------------------------------GQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187 (319)
T ss_dssp ECTT---------------------------------------SCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred ccCC---------------------------------------CCceEEEccCCCceecCCCCceeecccCCCccCHHHh
Confidence 3221 0125999999999765432 3455789999999998
Q ss_pred h--------cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 257 I--------GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 257 ~--------~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
. +..++.++|||||||++|+|++|+.||....... .....+..+....|...+....... ..
T Consensus 188 ~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~~-----~~ 257 (319)
T 4euu_A 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-----RNKEVMYKIITGKPSGAISGVQKAE-----NG 257 (319)
T ss_dssp HHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-----GCHHHHHHHHHHCCTTCCEEEECST-----TC
T ss_pred hhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-----hhHHHHHHHhcCCCcccchhhhccc-----CC
Confidence 7 4568999999999999999999999997544321 1122223333223322211111100 00
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 384 (393)
..... ..++....++...+..+.++|++||..||++|||++|+++||
T Consensus 258 ~~~~~---------~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 258 PIDWS---------GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CEEEE---------SSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred ccccC---------ccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 00000 011122245678889999999999999999999999999986
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=334.12 Aligned_cols=282 Identities=28% Similarity=0.423 Sum_probs=215.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
-++|++.+.||+|+||.||+|.+..+++.||+|++...... ...+.+|+.+++.+ .|+|++++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~ 89 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL--------------RHENLVNL 89 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC--------------CCTTBCCE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC--------------CCCCEeeE
Confidence 46899999999999999999999999999999988644322 34467899999999 79999999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++.+. .....++||||+.++++..+.... ..+++..+..++.|++.||++||++ |++||||||+||+++.++
T Consensus 90 ~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~-- 161 (331)
T 4aaa_A 90 LEVCK----KKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSG-- 161 (331)
T ss_dssp EEEEE----ETTEEEEEEECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTS--
T ss_pred EEEee----cCCEEEEEEecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCC--
Confidence 99887 567799999999666665554432 4589999999999999999999998 999999999999997766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC-
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA- 259 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~- 259 (393)
.++|+|||++..... ......+|+.|+|||++.+.
T Consensus 162 -----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 200 (331)
T 4aaa_A 162 -----------------------------------------VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV 200 (331)
T ss_dssp -----------------------------------------CEEECCCTTC------------CCCCCTTCCHHHHTTCT
T ss_pred -----------------------------------------cEEEEeCCCceeecCCccccCCCcCCccccCcccccCCC
Confidence 499999999876532 23345789999999999875
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|||||||++|+|++|+.||...+ ....+..+....+..+........+... +.. ..........+.
T Consensus 201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~ 272 (331)
T 4aaa_A 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDS------DIDQLYHIMMCLGNLIPRHQELFNKNPV-FAG-VRLPEIKEREPL 272 (331)
T ss_dssp TCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHHHHHHCGG-GTT-CCCCCCSSCCCH
T ss_pred CcchHHHHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCChhhhhHhhhccc-ccc-ccCccccccchh
Confidence 68999999999999999999999998765 6677788888888776644322111110 000 000000000000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
. ......+..+.+||.+||..||.+|||++|+|+||||+.
T Consensus 273 ------~---~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 312 (331)
T 4aaa_A 273 ------E---RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312 (331)
T ss_dssp ------H---HHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred ------h---hcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence 0 011245678999999999999999999999999999975
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=335.38 Aligned_cols=259 Identities=24% Similarity=0.443 Sum_probs=208.2
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
+..+.++|++.+.||+|+||.||+|.+..+|+.||||++..... ..+.+.+|+.+++.+.
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----------- 157 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA----------- 157 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHT-----------
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 34456789999999999999999999999999999999875431 1345678999999883
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCC
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKP 172 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp 172 (393)
.|+|++++++.+. .....++||||+ +++|.+.+... ..++...+..++.|++.||.|||+. |++|+||||
T Consensus 158 --~hp~iv~~~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp 228 (365)
T 2y7j_A 158 --GHPHIITLIDSYE----SSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKP 228 (365)
T ss_dssp --TCTTBCCEEEEEE----BSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSG
T ss_pred --CCCCEeEEEEEEe----eCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCH
Confidence 6899999998886 567899999999 67999888765 3489999999999999999999998 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQY 250 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y 250 (393)
+||+++.++ .++|+|||++..... ......||+.|
T Consensus 229 ~NIl~~~~~-------------------------------------------~ikl~DfG~~~~~~~~~~~~~~~gt~~y 265 (365)
T 2y7j_A 229 ENILLDDNM-------------------------------------------QIRLSDFGFSCHLEPGEKLRELCGTPGY 265 (365)
T ss_dssp GGEEECTTC-------------------------------------------CEEECCCTTCEECCTTCCBCCCCSCGGG
T ss_pred HHEEECCCC-------------------------------------------CEEEEecCcccccCCCcccccCCCCCCc
Confidence 999998766 499999999876543 23456789999
Q ss_pred chhHHHhcC------CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 251 RSVEVLIGA------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 251 ~aPE~~~~~------~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
+|||++.+. .++.++|||||||++|+|++|..||...+ ....+..+.......+...+
T Consensus 266 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~---------- 329 (365)
T 2y7j_A 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR------QILMLRMIMEGQYQFSSPEW---------- 329 (365)
T ss_dssp CCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCHHHH----------
T ss_pred cChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCCccc----------
Confidence 999999743 57889999999999999999999997543 22333332221111111110
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...+..+.+||.+||..||++|||+.|+++||||+.
T Consensus 330 ----------------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 330 ----------------------------DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp ----------------------------SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred ----------------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 234567889999999999999999999999999973
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=334.32 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=207.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+.+++.+ .|+|+++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~ 118 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL--------------RHPNTIQ 118 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC--------------CCTTBCC
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC--------------CCCCEee
Confidence 4579999999999999999999999999999999874322 234577899999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++++. .....++||||+.|++.+.+.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 119 ~~~~~~----~~~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~- 191 (348)
T 1u5q_A 119 YRGCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPG- 191 (348)
T ss_dssp EEEEEE----ETTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTT-
T ss_pred EEEEEE----ECCeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCC-
Confidence 999887 566799999999889988886543 4589999999999999999999998 999999999999998766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHh---cC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI---GA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~---~~ 259 (393)
.+||+|||++..... .....||+.|+|||++. ..
T Consensus 192 ------------------------------------------~~kL~DfG~a~~~~~-~~~~~gt~~y~aPE~~~~~~~~ 228 (348)
T 1u5q_A 192 ------------------------------------------LVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEG 228 (348)
T ss_dssp ------------------------------------------EEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHHTTSSC
T ss_pred ------------------------------------------CEEEeeccCceecCC-CCcccCCcceeCHhhhccccCC
Confidence 599999999876543 34567899999999996 45
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++|||||||++|+|++|+.||...+ ....+..+.. +..|.
T Consensus 229 ~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~--~~~~~---------------------------- 272 (348)
T 1u5q_A 229 QYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQ--NESPA---------------------------- 272 (348)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SCCCC----------------------------
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHh--cCCCC----------------------------
Confidence 68999999999999999999999997544 2222222221 11000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+...+..+.+||.+||..||++|||++++++||||....
T Consensus 273 ----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 273 ----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp ----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred ----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 01123456788999999999999999999999999997643
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=323.64 Aligned_cols=257 Identities=24% Similarity=0.367 Sum_probs=205.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+..|++.+.||+|+||.||+|.+..++..||+|.+.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~ 90 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL--------------QHPNIVRF 90 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC--------------CCTTBCCE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC--------------CCCCeeee
Confidence 457999999999999999999999999999999987532 2345577899998888 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEe-e
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMC-V 179 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~-~ 179 (393)
++.+.........+++||||+ +++|.+++... ..++...+..++.|++.||+|||++ + ++|+||||+||+++ .
T Consensus 91 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~ 167 (290)
T 1t4h_A 91 YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGP 167 (290)
T ss_dssp EEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESST
T ss_pred eeeeccccCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECC
Confidence 999886666678899999999 77999988765 3488999999999999999999998 8 99999999999996 3
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhc
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~ 258 (393)
++ .++|+|||++...... .....+|+.|+|||++.+
T Consensus 168 ~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~ 204 (290)
T 1t4h_A 168 TG-------------------------------------------SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE 204 (290)
T ss_dssp TS-------------------------------------------CEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT
T ss_pred CC-------------------------------------------CEEEeeCCCcccccccccccccCCcCcCCHHHHhc
Confidence 33 4999999998755433 234568999999998874
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.++.++||||||+++|+|++|+.||.... .......... .+..+.
T Consensus 205 -~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~-~~~~~~--------------------------- 249 (290)
T 1t4h_A 205 -KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRRVT-SGVKPA--------------------------- 249 (290)
T ss_dssp -CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHHHT-TTCCCG---------------------------
T ss_pred -cCCCcchHHHHHHHHHHHHhCCCCCCCcC------cHHHHHHHHh-ccCCcc---------------------------
Confidence 48999999999999999999999996543 1122111111 011111
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.++...+..+.++|.+||..||.+|||++|+++||||++-
T Consensus 250 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 250 -----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp -----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred -----------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 0112344678899999999999999999999999999863
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=324.49 Aligned_cols=258 Identities=24% Similarity=0.400 Sum_probs=187.2
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
+|+.+. +|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|
T Consensus 6 ~g~~~~-~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h 70 (278)
T 3cok_A 6 IGEKIE-DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL--------------KH 70 (278)
T ss_dssp HCSSGG-GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB--------------CC
T ss_pred cccccc-cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC--------------CC
Confidence 444443 7999999999999999999999999999999987432 2235678899888888 79
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+|++++++.+. .....++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ |++|+||||+||+
T Consensus 71 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil 144 (278)
T 3cok_A 71 PSILELYNYFE----DSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLL 144 (278)
T ss_dssp TTBCCEEEEEE----CSSEEEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEE
T ss_pred CCeEeEEEEEc----cCCeEEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEE
Confidence 99999999887 667899999999 678888876542 4589999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchh
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSV 253 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aP 253 (393)
++.++ .++|+|||++...... .....+|+.|+||
T Consensus 145 i~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 181 (278)
T 3cok_A 145 LTRNM-------------------------------------------NIKIADFGLATQLKMPHEKHYTLCGTPNYISP 181 (278)
T ss_dssp ECTTC-------------------------------------------CEEECCCTTCEECC------------------
T ss_pred EcCCC-------------------------------------------CEEEEeecceeeccCCCCcceeccCCCCcCCc
Confidence 97665 4999999998765422 2345689999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|.+.+..++.++||||||+++|+|++|+.||......... ..+
T Consensus 182 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~------------------------------- 224 (278)
T 3cok_A 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKV------------------------------- 224 (278)
T ss_dssp ----------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------C-------------------------------
T ss_pred chhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHH-------------------------------
Confidence 9999888899999999999999999999999754422110 000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.......+...+..+.++|.+||..||.+|||++++++||||.+..+
T Consensus 225 -----------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 271 (278)
T 3cok_A 225 -----------VLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS 271 (278)
T ss_dssp -----------CSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC----
T ss_pred -----------hhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCCC
Confidence 00001123345678889999999999999999999999999987543
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=359.08 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=210.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|+++++||+|+||.||+|++..+++.||||+++... ...+....|..++..+. .|++|++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~-------------~~~~i~~ 406 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-------------KPPFLTQ 406 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTT-------------CCTTBCC
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhcc-------------CCCeEEE
Confidence 357999999999999999999999999999999987532 23345566777766652 6889999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+.+. ....+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 407 l~~~~~----~~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g 479 (674)
T 3pfq_A 407 LHSCFQ----TMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEG 479 (674)
T ss_dssp EEEECB----CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSS
T ss_pred EEEEEE----eCCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCC
Confidence 998887 677899999999 78999888765 3489999999999999999999998 999999999999998777
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc---CCCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++.... ......+||+.|+|||++.+
T Consensus 480 -------------------------------------------~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~ 516 (674)
T 3pfq_A 480 -------------------------------------------HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY 516 (674)
T ss_dssp -------------------------------------------CEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTC
T ss_pred -------------------------------------------cEEEeecceeeccccCCcccccccCCCcccCHhhhcC
Confidence 49999999987532 23445679999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++|||||||++|||++|+.||.+.+ ..+....+.
T Consensus 517 ~~~~~~~DvwSlGvilyelltG~~Pf~~~~------~~~~~~~i~----------------------------------- 555 (674)
T 3pfq_A 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIM----------------------------------- 555 (674)
T ss_dssp CCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-----------------------------------
T ss_pred CCCCccceEechHHHHHHHHcCCCCCCCCC------HHHHHHHHH-----------------------------------
Confidence 999999999999999999999999997654 223333222
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCH-----HHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASA-----ADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~ 389 (393)
.....++...+..+.+||++||+.||.+||++ +|+++||||+++
T Consensus 556 -------~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 556 -------EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp -------SSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred -------hCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 22233445667889999999999999999997 999999999976
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=321.56 Aligned_cols=261 Identities=25% Similarity=0.371 Sum_probs=209.2
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----------ccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----------VYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
...+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+.
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---------- 81 (298)
T 1phk_A 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS---------- 81 (298)
T ss_dssp ---CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT----------
T ss_pred CcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 3456679999999999999999999999999999999987532 12345678999999982
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.|+|++++++.+. .+...++|||++ +++|.+++... ..++...+..++.|++.||++||++ |++|+|||
T Consensus 82 ---~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~ 151 (298)
T 1phk_A 82 ---GHPNIIQLKDTYE----TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL-NIVHRDLK 151 (298)
T ss_dssp ---TCTTBCCEEEEEE----CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCS
T ss_pred ---CCCCEeeeeeeec----cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCC
Confidence 4899999999886 677899999999 67999988765 3489999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCC
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQ 249 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~ 249 (393)
|+||+++.++ .++|+|||++..... ......+|+.
T Consensus 152 p~Nil~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~ 188 (298)
T 1phk_A 152 PENILLDDDM-------------------------------------------NIKLTDFGFSCQLDPGEKLREVCGTPS 188 (298)
T ss_dssp GGGEEECTTC-------------------------------------------CEEECCCTTCEECCTTCCBCCCCSCGG
T ss_pred cceEEEcCCC-------------------------------------------cEEEecccchhhcCCCcccccccCCcc
Confidence 9999997766 499999999876543 2344578999
Q ss_pred CchhHHHh------cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 250 YRSVEVLI------GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 250 y~aPE~~~------~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
|+|||++. ...++.++||||||+++|+|++|..||...+ .......+.......+..
T Consensus 189 y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~----------- 251 (298)
T 1phk_A 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRMIMSGNYQFGSP----------- 251 (298)
T ss_dssp GCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCTT-----------
T ss_pred ccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc------HHHHHHHHhcCCcccCcc-----------
Confidence 99999986 3457899999999999999999999996543 222222222211111100
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+..+.++|.+||..||.+|||+.|+++||||++..
T Consensus 252 ---------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 252 ---------------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp ---------------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred ---------------------------cccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 0134567889999999999999999999999999999764
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-44 Score=330.87 Aligned_cols=262 Identities=26% Similarity=0.355 Sum_probs=205.7
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
....+.++|++.+.||+|+||.||+|.+..+++.||+|++...... ...+.+|+.+++.+ .|
T Consensus 6 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h 71 (311)
T 3ork_A 6 TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL--------------NH 71 (311)
T ss_dssp CCSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC--------------CC
T ss_pred CcceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC--------------CC
Confidence 4567888999999999999999999999999999999999754322 23455666666555 79
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+||+++++.+......+...++||||+ +++|.+++... ..+++.++..++.|++.||+|||++ |++||||||+||+
T Consensus 72 p~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil 148 (311)
T 3ork_A 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIM 148 (311)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEE
T ss_pred CCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEE
Confidence 999999999987766667789999999 78999988765 3489999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCC
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQY 250 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y 250 (393)
++.++ .+||+|||++...... .....||+.|
T Consensus 149 ~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 185 (311)
T 3ork_A 149 ISATN-------------------------------------------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185 (311)
T ss_dssp EETTS-------------------------------------------CEEECCCSCC------------------CCTT
T ss_pred EcCCC-------------------------------------------CEEEeeccCcccccccccccccccccCcCccc
Confidence 98776 4999999998765322 2234689999
Q ss_pred chhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCe
Q psy12288 251 RSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNF 330 (393)
Q Consensus 251 ~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 330 (393)
+|||++.+..++.++||||||+++|+|++|+.||.+.+ .......... ....+...
T Consensus 186 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~-~~~~~~~~----------------- 241 (311)
T 3ork_A 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVR-EDPIPPSA----------------- 241 (311)
T ss_dssp CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH-CCCCCHHH-----------------
T ss_pred CCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhc-CCCCCccc-----------------
Confidence 99999999999999999999999999999999997544 2222222211 12222111
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
.....+..+.++|.+||..||.+||++.+++.|+|++
T Consensus 242 --------------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 242 --------------------RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp --------------------HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred --------------------ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 0134567888999999999999999999999999986
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=334.31 Aligned_cols=273 Identities=21% Similarity=0.313 Sum_probs=190.5
Q ss_pred cccccCCeeCCeEEEEE-EecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHH-HHHhcccCCCCcccccCc
Q psy12288 18 CPVQIGDLFNFRYHVIR-KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVL-LKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~-l~~l~~~~~~~~~~~~~~ 95 (393)
.|......+.++|++.+ .||+|+||.||+|.+..+++.||||++... ....+|+.. ++.+
T Consensus 18 ~p~~~~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~-------------- 79 (336)
T 3fhr_A 18 GPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQAS-------------- 79 (336)
T ss_dssp --CCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHT--------------
T ss_pred CCCCCCccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhc--------------
Confidence 45556667888999966 699999999999999999999999998753 233444444 3333
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.|+|++++++.+......+...++||||+ +++|.+.+.......+++.+++.++.|++.||+|||++ |++||||||+|
T Consensus 80 ~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~N 158 (336)
T 3fhr_A 80 GGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPEN 158 (336)
T ss_dssp TSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGG
T ss_pred CCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHH
Confidence 78999999999986666677899999999 77999999876555699999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchh
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSV 253 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aP 253 (393)
|+++.++. ...++|+|||++...... .....+|+.|+||
T Consensus 159 Ill~~~~~----------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aP 198 (336)
T 3fhr_A 159 LLYTSKEK----------------------------------------DAVLKLTDFGFAKETTQNALQTPCYTPYYVAP 198 (336)
T ss_dssp EEESCSST----------------------------------------TCCEEECCCTTCEEC-----------------
T ss_pred EEEEecCC----------------------------------------CceEEEeccccceeccccccccCCCCcCccCh
Confidence 99975432 124999999998765432 3345679999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+..++.++||||||+++|+|++|..||........... ....+.......|
T Consensus 199 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~----------------------- 253 (336)
T 3fhr_A 199 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRRIRLGQYGFP----------------------- 253 (336)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCC-----------------------
T ss_pred hhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHhhhccccccC-----------------------
Confidence 999888889999999999999999999999975543221000 0000000000000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.......+..+.+||.+||..||.+|||++|+++||||++.
T Consensus 254 ---------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 254 ---------------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp ---------------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred ---------------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 00113456788999999999999999999999999999864
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=343.38 Aligned_cols=259 Identities=27% Similarity=0.407 Sum_probs=197.9
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---------ccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---------VYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------------- 197 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-------------- 197 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC--------------
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC--------------
Confidence 34578999999999999999999999999999999987532 1223578899999999
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.|+|++++++.+. ....++||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ |++||||||+|
T Consensus 198 ~hpniv~l~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~N 269 (419)
T 3i6u_A 198 NHPCIIKIKNFFD-----AEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPEN 269 (419)
T ss_dssp CCTTBCCCCEEEE-----SSEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGG
T ss_pred CCCCEeeEEEEEe-----cCceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHh
Confidence 8999999998864 33478999999 77888777554 4589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCch
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRS 252 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~a 252 (393)
||++.++. ...+||+|||++...... .....||+.|+|
T Consensus 270 Ill~~~~~----------------------------------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~a 309 (419)
T 3i6u_A 270 VLLSSQEE----------------------------------------DCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309 (419)
T ss_dssp EEESSSSS----------------------------------------SCCEEECCSSTTTSCC-----------CTTCC
T ss_pred EEEecCCC----------------------------------------cceEEEeecccceecCCCccccccCCCCCccC
Confidence 99965432 124999999999876433 234578999999
Q ss_pred hHHHhc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 253 VEVLIG---AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 253 PE~~~~---~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
||++.+ ..++.++|||||||++|+|++|..||........ ....+.......+...
T Consensus 310 PE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-----~~~~i~~~~~~~~~~~---------------- 368 (419)
T 3i6u_A 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-----LKDQITSGKYNFIPEV---------------- 368 (419)
T ss_dssp TTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-----HHHHHHTTCCCCCHHH----------------
T ss_pred ceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-----HHHHHhcCCCCCCchh----------------
Confidence 999864 5678899999999999999999999975442211 1111111000111100
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+..+.+||.+||..||.+|||++|+++||||++
T Consensus 369 ----------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 369 ----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp ----------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred ----------------------hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 1235678899999999999999999999999999986
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-45 Score=346.20 Aligned_cols=254 Identities=13% Similarity=0.081 Sum_probs=196.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|++.+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.+.. ..|+||++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----------l~hpniv~ 140 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG-----------IKNQKQAK 140 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT-----------CCSHHHHH
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc-----------cCCHHHHH
Confidence 47899999999999999999999999999999998743 2234567788866665532 17999999
Q ss_pred ccccce----eecCCC-----------e-----EEEEEEeeccccHHHHHHhcCCCCCCH-------HHHHHHHHHHHHH
Q psy12288 103 LLNDFK----IYSRNG-----------T-----HICMVFEVMGYNLLRLIARSDYKGIHI-------QNVRTIIKQVLEG 155 (393)
Q Consensus 103 ~~~~~~----~~~~~~-----------~-----~~~iv~e~~~~~l~~~~~~~~~~~l~~-------~~~~~i~~ql~~~ 155 (393)
+++.+. .....+ . ..+++|||++|+|.+++.... .+++ ..+..++.||+.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~a 218 (377)
T 3byv_A 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRL 218 (377)
T ss_dssp HHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHH
Confidence 885442 111111 1 378999999999999987642 1444 7778899999999
Q ss_pred HHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccc
Q psy12288 156 LNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNAC 235 (393)
Q Consensus 156 l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~ 235 (393)
|+|||++ ||+||||||+|||++.++ .+||+|||+++
T Consensus 219 L~~LH~~-~ivHrDikp~NIll~~~~-------------------------------------------~~kL~DFG~a~ 254 (377)
T 3byv_A 219 LASLHHY-GLVHTYLRPVDIVLDQRG-------------------------------------------GVFLTGFEHLV 254 (377)
T ss_dssp HHHHHHT-TEECSCCCGGGEEECTTC-------------------------------------------CEEECCGGGCE
T ss_pred HHHHHhC-CeecCCCCHHHEEEcCCC-------------------------------------------CEEEEechhhe
Confidence 9999998 999999999999998766 49999999998
Q ss_pred cccCCCCCCCCCCCCchhHHHhcC-----------CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH
Q psy12288 236 WIDDHFADEIQTRQYRSVEVLIGA-----------GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304 (393)
Q Consensus 236 ~~~~~~~~~~~t~~y~aPE~~~~~-----------~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 304 (393)
..+.......| +.|+|||++.+. .++.++|||||||++|+|++|+.||...+......
T Consensus 255 ~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~---------- 323 (377)
T 3byv_A 255 RDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE---------- 323 (377)
T ss_dssp ETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG----------
T ss_pred ecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh----------
Confidence 76655555677 999999999987 79999999999999999999999996544221100
Q ss_pred HhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCC
Q psy12288 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384 (393)
Q Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 384 (393)
.........+..+.+||.+||..||++|||+.|+++||
T Consensus 324 ------------------------------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 361 (377)
T 3byv_A 324 ------------------------------------------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP 361 (377)
T ss_dssp ------------------------------------------GGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSH
T ss_pred ------------------------------------------hhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhCh
Confidence 00001123456788999999999999999999999999
Q ss_pred CCCCCC
Q psy12288 385 WLNPRR 390 (393)
Q Consensus 385 ~~~~~~ 390 (393)
||++++
T Consensus 362 ~f~~~~ 367 (377)
T 3byv_A 362 EYEQLR 367 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=342.05 Aligned_cols=266 Identities=13% Similarity=0.121 Sum_probs=193.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.+|++.++||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+.. .|+|++++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~------------~hp~iv~~ 129 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG------------ESPEEARD 129 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc------------cChhhhhh
Confidence 36999999999999999999999999999999998643 234566788888888832 47887775
Q ss_pred cccce----ee---cC-------------CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHH------HHHHHHHHHHHH
Q psy12288 104 LNDFK----IY---SR-------------NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV------RTIIKQVLEGLN 157 (393)
Q Consensus 104 ~~~~~----~~---~~-------------~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~------~~i~~ql~~~l~ 157 (393)
+..+. .. +. ....+++||||++++|.+++.... ..+....+ ..++.||+.||+
T Consensus 130 ~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~ 208 (371)
T 3q60_A 130 RRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAA 208 (371)
T ss_dssp --CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHH
Confidence 54442 11 10 115689999999999999987642 12444445 577799999999
Q ss_pred HhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc
Q psy12288 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI 237 (393)
Q Consensus 158 ~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~ 237 (393)
|||++ ||+||||||+|||++.++ .+||+|||++...
T Consensus 209 ~LH~~-~ivHrDikp~NIll~~~~-------------------------------------------~~kL~DFG~a~~~ 244 (371)
T 3q60_A 209 NLQSK-GLVHGHFTPDNLFIMPDG-------------------------------------------RLMLGDVSALWKV 244 (371)
T ss_dssp HHHHT-TEEETTCSGGGEEECTTS-------------------------------------------CEEECCGGGEEET
T ss_pred HHHHC-CCccCcCCHHHEEECCCC-------------------------------------------CEEEEecceeeec
Confidence 99998 999999999999998776 4999999999877
Q ss_pred cCCCCCCCCCCCCchhHHHhc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHh
Q psy12288 238 DDHFADEIQTRQYRSVEVLIG--AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315 (393)
Q Consensus 238 ~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 315 (393)
+.......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||..........
T Consensus 245 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--------------------- 303 (371)
T 3q60_A 245 GTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS--------------------- 303 (371)
T ss_dssp TCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC---------------------
T ss_pred CCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc---------------------
Confidence 654435567799999999987 678999999999999999999999997654321100
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
......... .. .....+.....+..+.+||.+||..||++|||+.|+++||||+++
T Consensus 304 --~~~~~~~~~-~~---------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 304 --WKRPSLRVP-GT---------------DSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp --CCBCCTTSC-CC---------------CSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred --hhhhhhhhc-cc---------------cccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 000000000 00 000001113456788999999999999999999999999999764
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=328.77 Aligned_cols=262 Identities=24% Similarity=0.393 Sum_probs=207.8
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+..+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+|+.+++.+ .|+|++
T Consensus 4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 69 (304)
T 2jam_A 4 TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI--------------KHENIV 69 (304)
T ss_dssp --CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC--------------CCTTBC
T ss_pred ccchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC--------------CCCCee
Confidence 34567799999999999999999999999999999999875432 345678999999999 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .....++|||++ +++|.+.+.... .+++..+..++.|++.||.|||++ |++|+||||+||++..+
T Consensus 70 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~ 142 (304)
T 2jam_A 70 TLEDIYE----STTHYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTP 142 (304)
T ss_dssp CEEEEEE----CSSEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSS
T ss_pred ehhhhcc----cCCEEEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecC
Confidence 9999887 667899999999 789998887653 489999999999999999999998 99999999999999322
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcC
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~ 259 (393)
.. ...++|+|||++...... .....+|+.|+|||++.+.
T Consensus 143 ~~----------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 182 (304)
T 2jam_A 143 EE----------------------------------------NSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQK 182 (304)
T ss_dssp ST----------------------------------------TCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSC
T ss_pred CC----------------------------------------CCCEEEccCCcceecCCCccccccCCCCccChHHhccC
Confidence 11 115999999998754332 2223579999999999988
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
.++.++||||||+++|+|++|..||...+ .......+.......+.
T Consensus 183 ~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~---------------------------- 228 (304)
T 2jam_A 183 PYSKAVDCWSIGVITYILLCGYPPFYEET------ESKLFEKIKEGYYEFES---------------------------- 228 (304)
T ss_dssp SCCHHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHCCCCCCT----------------------------
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCCCc----------------------------
Confidence 89999999999999999999999997544 22223322221111110
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.+....+..+.+||.+||..||.+|||++|+++||||.+.
T Consensus 229 ----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 229 ----------PFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp ----------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred ----------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 1123456788999999999999999999999999999764
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=322.63 Aligned_cols=256 Identities=25% Similarity=0.368 Sum_probs=210.1
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
++....++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h 74 (294)
T 2rku_A 9 VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL--------------AH 74 (294)
T ss_dssp EETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC--------------CC
T ss_pred eCCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC--------------CC
Confidence 34455679999999999999999999999999999999987542 2245667899999888 79
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+|++++++.+. .....++|||++ +++|.+.+... ..+++.++..++.|++.||+|||++ |++|+||||+||+
T Consensus 75 ~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil 147 (294)
T 2rku_A 75 QHVVGFHGFFE----DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLF 147 (294)
T ss_dssp TTBCCEEEEEE----CSSEEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEE
T ss_pred CCEeeeeeeec----cCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEE
Confidence 99999999887 667899999999 68888887665 3489999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchh
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSV 253 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aP 253 (393)
++.++ .++|+|||++..... ......+|+.|+||
T Consensus 148 ~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 184 (294)
T 2rku_A 148 LNEDL-------------------------------------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184 (294)
T ss_dssp ECTTC-------------------------------------------CEEECCCTTCEECCSTTCCBCCCCSCCSSCCH
T ss_pred EcCCC-------------------------------------------CEEEEeccCceecccCccccccccCCCCcCCc
Confidence 98765 499999999876532 23345689999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|.+.+..++.++||||||+++|+|++|+.||.... .......+..
T Consensus 185 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~----------------------------- 229 (294)
T 2rku_A 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKK----------------------------- 229 (294)
T ss_dssp HHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHT-----------------------------
T ss_pred chhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhh-----------------------------
Confidence 99999889999999999999999999999996543 1111111111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||++|||++|+++||||++.
T Consensus 230 -------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 230 -------------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp -------------TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred -------------ccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 1111233455678899999999999999999999999999764
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=320.91 Aligned_cols=253 Identities=24% Similarity=0.409 Sum_probs=209.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
...++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+|+
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 76 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL--------------RHPNI 76 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC--------------CCTTB
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC--------------CCCCE
Confidence 34468999999999999999999999999999999986432 2235678899999998 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....++|||++ +++|.+.+.... .+++..+..++.|++.||+|||++ |++|+||||+||+++.
T Consensus 77 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~ 149 (284)
T 2vgo_A 77 LRMYNYFH----DRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGY 149 (284)
T ss_dssp CCEEEEEE----CSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECT
T ss_pred eeEEEEEE----cCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcC
Confidence 99999887 567899999999 679999887653 489999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-CCCCCCCCCCCchhHHHhc
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~t~~y~aPE~~~~ 258 (393)
++ .++|+|||++..... ......+++.|+|||++.+
T Consensus 150 ~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~ 186 (284)
T 2vgo_A 150 KG-------------------------------------------ELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEG 186 (284)
T ss_dssp TC-------------------------------------------CEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTT
T ss_pred CC-------------------------------------------CEEEecccccccCcccccccccCCCCcCCHHHhcc
Confidence 66 499999998865543 2344578999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
..++.++||||||+++|+|++|..||...+ .......+..
T Consensus 187 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~---------------------------------- 226 (284)
T 2vgo_A 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPS------HTETHRRIVN---------------------------------- 226 (284)
T ss_dssp CCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHT----------------------------------
T ss_pred CCCCcccchhhHHHHHHHHHHCCCCCCCCC------HhHHHHHHhc----------------------------------
Confidence 889999999999999999999999996543 2222221111
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||.+|||++|+++||||+..
T Consensus 227 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 227 --------VDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp --------TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred --------cccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 1112234456788899999999999999999999999999754
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-43 Score=333.57 Aligned_cols=254 Identities=24% Similarity=0.402 Sum_probs=200.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.+|++.+.||+|+||.||+|.+.. ++.||||++..... ..+.+.+|+.+++.+.+ .|+||+++
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~------------~~~~iv~~ 121 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ------------HSDKIIRL 121 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT------------TCTTBCCE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc------------CCCeEEEE
Confidence 4679999999999999999998865 88999999875432 24567899999999942 36899999
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++.+. ....+++|||+.+++|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+|||++. +
T Consensus 122 ~~~~~----~~~~~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~-~-- 191 (390)
T 2zmd_A 122 YDYEI----TDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-G-- 191 (390)
T ss_dssp EEEEE----CSSEEEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEESS-S--
T ss_pred EEEEe----cCCEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEEC-C--
Confidence 98877 567799999977999999987753 588899999999999999999998 9999999999999953 2
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++...... ....+||+.|+|||++.+
T Consensus 192 -----------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 230 (390)
T 2zmd_A 192 -----------------------------------------MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230 (390)
T ss_dssp -----------------------------------------CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHC
T ss_pred -----------------------------------------eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhh
Confidence 4999999999865432 234578999999999976
Q ss_pred -----------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 259 -----------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 259 -----------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
..++.++|||||||++|+|++|+.||..... .... +.......
T Consensus 231 ~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~---~~~~~~~~------------------ 284 (390)
T 2zmd_A 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISK---LHAIIDPN------------------ 284 (390)
T ss_dssp C------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHH---HHHHHCTT------------------
T ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHH---HHHHhCcc------------------
Confidence 3588999999999999999999999964331 1111 11111110
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....++...+..+.+||.+||..||.+|||+.|+++||||...
T Consensus 285 -------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 285 -------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp -------------------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred -------------------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence 0011223335678899999999999999999999999999643
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=320.27 Aligned_cols=258 Identities=26% Similarity=0.412 Sum_probs=203.2
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
-|++..++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|
T Consensus 5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h 70 (276)
T 2h6d_A 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF--------------RH 70 (276)
T ss_dssp --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC--------------CC
T ss_pred cCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC--------------CC
Confidence 46667789999999999999999999999999999999987432 2345678899999988 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+|++++++.+. .....++|||++ +++|.+.+.... .++...+..++.|++.||++||++ |++|+||||+||+
T Consensus 71 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil 143 (276)
T 2h6d_A 71 PHIIKLYQVIS----TPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVL 143 (276)
T ss_dssp TTBCCEEEEEE----CSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEE
T ss_pred CCEeEEEEEEe----cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEE
Confidence 99999999887 567899999999 779999887653 489999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE 254 (393)
++.++ .++|+|||++...... .....+|+.|+|||
T Consensus 144 ~~~~~-------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE 180 (276)
T 2h6d_A 144 LDAHM-------------------------------------------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPE 180 (276)
T ss_dssp ECTTS-------------------------------------------CEEECCCCGGGCCCC-------------CCTG
T ss_pred ECCCC-------------------------------------------CEEEeecccccccCCCcceecccCCccccCHH
Confidence 98666 4999999998765432 23456899999999
Q ss_pred HHhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+..+ +.++||||||+++|+|++|..||.... .......+..
T Consensus 181 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~----------------------------- 225 (276)
T 2h6d_A 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIRG----------------------------- 225 (276)
T ss_dssp GGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH-----------------------------
T ss_pred HHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhc-----------------------------
Confidence 9988765 689999999999999999999996533 1122211111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....++...+..+.++|.+||..||.+|||++|+++||||++...
T Consensus 226 -------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 226 -------------GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp -------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred -------------CcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 111122344567889999999999999999999999999987654
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=321.02 Aligned_cols=257 Identities=21% Similarity=0.322 Sum_probs=188.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccch--h-hHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD--T-ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~-~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
..++|++.++||+|+||.||+|.+..+++.||+|++........ . ..++...++.+ .|+|+++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~--------------~h~~iv~ 70 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV--------------DCPFTVT 70 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC--------------CCCeEEE
Confidence 35689999999999999999999999999999999875422211 1 12222223333 8999999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++.+. .+...++||||+++++.+.+.. .....+++..+..++.|++.||+|||+++|++||||||+||+++.+
T Consensus 71 ~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~ 146 (290)
T 3fme_A 71 FYGALF----REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL 146 (290)
T ss_dssp EEEEEE----CSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTT
T ss_pred Eeeeee----ccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC
Confidence 999887 5667999999998888777653 2234589999999999999999999986599999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHH--
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVL-- 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~-- 256 (393)
+ .++|+|||++...... .....+|+.|+|||++
T Consensus 147 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 183 (290)
T 3fme_A 147 G-------------------------------------------QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183 (290)
T ss_dssp C-------------------------------------------CEEBCCC---------------CCCCCCSCHHHHSC
T ss_pred C-------------------------------------------CEEEeecCCcccccccccccccCCCccccChhhcCh
Confidence 5 4999999998765433 2234689999999997
Q ss_pred --hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 257 --IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 257 --~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
.+..++.++||||||+++|+|++|..||..... ....+...... ..+.
T Consensus 184 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~--~~~~----------------------- 233 (290)
T 3fme_A 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEE--PSPQ----------------------- 233 (290)
T ss_dssp CTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHS--CCCC-----------------------
T ss_pred hhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhcc--CCCC-----------------------
Confidence 455689999999999999999999999964331 12222222111 0000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
......+..+.++|.+||..||.+|||+.|+++||||+.
T Consensus 234 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 234 ---------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp ---------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred ---------------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence 001234667899999999999999999999999999964
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=326.16 Aligned_cols=262 Identities=22% Similarity=0.345 Sum_probs=206.1
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.+.||+|+||.||+|.+..+++.||+|++.........+.+|+.+++.+. .|+|++++++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-------------~h~~i~~~~~ 88 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-------------HHRNIATYYG 88 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHC-------------CSTTBCCEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhcc-------------CCCCeeeeee
Confidence 467999999999999999999999999999999999876666778899999999983 6899999999
Q ss_pred cceeecC--CCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSR--NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~--~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+..... .....++||||+ +++|.+++.......++...+..++.||+.||+|||++ |++|+||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~- 166 (326)
T 2x7f_A 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENA- 166 (326)
T ss_dssp EEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTC-
T ss_pred EEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCC-
Confidence 8874321 256799999999 67999988765445689999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh--
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI-- 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~-- 257 (393)
.++|+|||++...... .....+|+.|+|||++.
T Consensus 167 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 204 (326)
T 2x7f_A 167 ------------------------------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204 (326)
T ss_dssp ------------------------------------------CEEECCCTTTC-------------CCGGGCCHHHHC--
T ss_pred ------------------------------------------CEEEeeCcCceecCcCccccccccCCccccChhhhccc
Confidence 4999999998765432 23456899999999997
Q ss_pred ---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 258 ---GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 258 ---~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+..++.++||||||+++|+|++|..||.... ....+..+.. +..|.
T Consensus 205 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~~----------------------- 253 (326)
T 2x7f_A 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH------PMRALFLIPR--NPAPR----------------------- 253 (326)
T ss_dssp ------CCTTHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SCCCC-----------------------
T ss_pred cccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhc--Ccccc-----------------------
Confidence 4568899999999999999999999996543 2222221111 11100
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
..+...+..+.+||.+||..||.+|||+.|+++||||++..
T Consensus 254 ---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 254 ---------------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp ---------------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred ---------------CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 00123456788999999999999999999999999998753
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=326.65 Aligned_cols=253 Identities=26% Similarity=0.370 Sum_probs=209.4
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
...++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+|+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 103 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL--------------AHQHV 103 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC--------------CCTTB
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC--------------CCCCC
Confidence 34679999999999999999999999999999999987542 2345677899999988 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....++||||+ +++|.+.+... ..+++.++..++.|++.||+|||++ |++|+||||+||+++.
T Consensus 104 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~ 176 (335)
T 2owb_A 104 VGFHGFFE----DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNE 176 (335)
T ss_dssp CCEEEEEE----CSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred CeEEEEEe----cCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcC
Confidence 99999887 667899999999 67888887665 3489999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~ 256 (393)
++ .++|+|||++..... ......+|+.|+|||++
T Consensus 177 ~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~ 213 (335)
T 2owb_A 177 DL-------------------------------------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 213 (335)
T ss_dssp TC-------------------------------------------CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHH
T ss_pred CC-------------------------------------------CEEEeeccCceecccCcccccccCCCccccCHHHh
Confidence 66 499999999876532 23345689999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++||||||+++|+|++|+.||.... .......+..
T Consensus 214 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~-------------------------------- 255 (335)
T 2owb_A 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKK-------------------------------- 255 (335)
T ss_dssp HTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHH--------------------------------
T ss_pred ccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhc--------------------------------
Confidence 99889999999999999999999999996543 1222211111
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....++...+..+.+||.+||..||.+|||++|+++||||...
T Consensus 256 ----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 256 ----------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp ----------TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred ----------CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 1112234455678899999999999999999999999999865
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=321.12 Aligned_cols=277 Identities=22% Similarity=0.292 Sum_probs=201.9
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
....+.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+..+..+. .|+
T Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~-------------~h~ 71 (289)
T 1x8b_A 5 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG-------------QHS 71 (289)
T ss_dssp CCCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSC-------------SCT
T ss_pred ccccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhC-------------CCC
Confidence 34456679999999999999999999999999999999987532 22345667777777762 689
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|++++++.+. .....++||||+ +++|.+.+.... ...+++..+..++.|++.||+|||++ |++||||||+||
T Consensus 72 ~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NI 146 (289)
T 1x8b_A 72 HVVRYFSAWA----EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNI 146 (289)
T ss_dssp TBCCEEEEEE----ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGE
T ss_pred Ceeeeeeeee----cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHE
Confidence 9999999886 566899999999 679999886532 13489999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHH
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEV 255 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~ 255 (393)
+++.++...... .. ............++|+|||.+...... ....+|+.|+|||+
T Consensus 147 l~~~~~~~~~~~--------------------~~----~~~~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~ 201 (289)
T 1x8b_A 147 FISRTSIPNAAS--------------------EE----GDEDDWASNKVMFKIGDLGHVTRISSP-QVEEGDSRFLANEV 201 (289)
T ss_dssp EEC--------------------------------------------CCCEEECCCTTCEETTCS-CCCCCCGGGCCHHH
T ss_pred EEcCCCCCcccc--------------------cc----cccccccCCceEEEEcccccccccCCc-cccCCCccccChhH
Confidence 998665210000 00 000000011235899999998866543 33468999999999
Q ss_pred HhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+. .++.++||||||+++|+|++|.+++.... ....+.. +..
T Consensus 202 ~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~~~~~--~~~------------------------- 245 (289)
T 1x8b_A 202 LQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---------QWHEIRQ--GRL------------------------- 245 (289)
T ss_dssp HTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---------HHHHHHT--TCC-------------------------
T ss_pred hcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---------HHHHHHc--CCC-------------------------
Confidence 9876 46789999999999999999987764211 1111110 110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
..++...+..+.++|.+||..||++|||+.|+++||||++...
T Consensus 246 --------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 288 (289)
T 1x8b_A 246 --------------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288 (289)
T ss_dssp --------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-----
T ss_pred --------------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhcc
Confidence 0122345678899999999999999999999999999997654
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-42 Score=321.83 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=206.2
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.++++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+.+++.+. .|+|+++++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-------------~h~~i~~~~ 71 (330)
T 2izr_A 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLG-------------SGDGIPQVY 71 (330)
T ss_dssp EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHC-------------SCTTSCCEE
T ss_pred EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhh-------------CCCCCCEEE
Confidence 45679999999999999999999999999999999987543 3567899999999994 688899998
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .+...++|||+++++|.+++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++...
T Consensus 72 ~~~~----~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~ 145 (330)
T 2izr_A 72 YFGP----CGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKT 145 (330)
T ss_dssp EEEE----ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTC
T ss_pred EEEe----cCCccEEEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCC
Confidence 8876 567899999999999999987642 4599999999999999999999998 999999999999998776310
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhH
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVE 254 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE 254 (393)
...++|+|||++...... .....||+.|+|||
T Consensus 146 --------------------------------------~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 187 (330)
T 2izr_A 146 --------------------------------------QQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSIN 187 (330)
T ss_dssp --------------------------------------TTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred --------------------------------------CceEEEEEcccceeeecCCCCccccccccCCcCCCccccChH
Confidence 113999999999865332 13457899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++|||||||++|+|++|..||.+.+... ....+..+.......|....
T Consensus 188 ~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~~~-------------------- 244 (330)
T 2izr_A 188 THLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT---LKERYQKIGDTKRATPIEVL-------------------- 244 (330)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS---HHHHHHHHHHHHHHSCHHHH--------------------
T ss_pred HHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc---HHHHHHHHHhhhccCCHHHH--------------------
Confidence 9999999999999999999999999999998654322 22222222221111111110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+ .+.++|.+||..||.+||+++++++
T Consensus 245 -----------------~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 245 -----------------CENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp -----------------TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred -----------------hccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 12234 8899999999999999999998876
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=318.70 Aligned_cols=257 Identities=23% Similarity=0.333 Sum_probs=206.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~ 70 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML--------------NHENVVKF 70 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC--------------CCTTBCCE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc--------------CCCCceee
Confidence 3468999999999999999999999999999999987443 2346678899999988 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .+...++|||++ +++|.+.+... ..++...+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 71 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~- 142 (276)
T 2yex_A 71 YGHRR----EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERD- 142 (276)
T ss_dssp EEEEE----ETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTC-
T ss_pred eeEEE----cCCEEEEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCC-
Confidence 99886 567789999999 67888776543 3489999999999999999999998 999999999999998666
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~ 257 (393)
.++|+|||.+..... ......+|+.|+|||++.
T Consensus 143 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (276)
T 2yex_A 143 ------------------------------------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180 (276)
T ss_dssp ------------------------------------------CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGT
T ss_pred ------------------------------------------CEEEeeCCCccccCCCcchhcccCCccccCccChHHHh
Confidence 499999999875432 133457899999999998
Q ss_pred cCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+..+ +.++||||||+++|+|++|..||....... ............
T Consensus 181 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~---------------------------- 227 (276)
T 2yex_A 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----QEYSDWKEKKTY---------------------------- 227 (276)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-----HHHHHHHTTCTT----------------------------
T ss_pred cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHhhhcccc----------------------------
Confidence 8765 779999999999999999999997644211 111111000000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.......+..+.++|.+||..||.+|||++|+++||||++...
T Consensus 228 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 228 ------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp ------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred ------------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 0001245667889999999999999999999999999997654
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=323.62 Aligned_cols=271 Identities=28% Similarity=0.448 Sum_probs=214.4
Q ss_pred CCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcc
Q psy12288 14 PGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
|++-.+...+..+.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l--------- 78 (287)
T 2wei_A 8 SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL--------- 78 (287)
T ss_dssp -CCHHHHHHTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC---------
T ss_pred cccccchhHHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc---------
Confidence 4444555667778889999999999999999999999999999999987532 2345678899999998
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
.|+|++++++.+. .....++|||++ +++|.+.+.... .++...+..++.|++.||++||++ |++|+|
T Consensus 79 -----~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~d 146 (287)
T 2wei_A 79 -----DHPNIMKLFEILE----DSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH-NIVHRD 146 (287)
T ss_dssp -----CCTTBCCEEEEEE----CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCSC
T ss_pred -----cCCCccEEEEEEe----CCCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeccC
Confidence 7899999999887 567899999999 789988887653 489999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQT 247 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t 247 (393)
|||+||+++.++. ...++|+|||++...... .....+|
T Consensus 147 l~p~NIlv~~~~~----------------------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~ 186 (287)
T 2wei_A 147 LKPENILLESKEK----------------------------------------DCDIKIIDFGLSTCFQQNTKMKDRIGT 186 (287)
T ss_dssp CCGGGEEESCSST----------------------------------------TCCEEECSTTGGGTBCCCSSCSCHHHH
T ss_pred CChhhEEEecCCC----------------------------------------cccEEEeccCcceeecCCCccccccCc
Confidence 9999999965431 124999999998765432 2233578
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
+.|+|||.+.+. ++.++||||||+++|+|++|..||.+.+ .......+.......+..
T Consensus 187 ~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~--------------- 244 (287)
T 2wei_A 187 AYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETGKYAFDLP--------------- 244 (287)
T ss_dssp HTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCSG---------------
T ss_pred ccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCCCCch---------------
Confidence 899999998765 8999999999999999999999997644 222222222210000000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+..+.++|++||..||.+|||+.|+++||||++..
T Consensus 245 -----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 245 -----------------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp -----------------------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred -----------------------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence 0123456788999999999999999999999999997644
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=321.05 Aligned_cols=258 Identities=23% Similarity=0.333 Sum_probs=202.6
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.+|+.++++|++.+.||+|+||.||+|++..+++.||+|.+..... ..+.+.+|+.+++.+ .
T Consensus 4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~ 69 (294)
T 4eqm_A 4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL--------------S 69 (294)
T ss_dssp CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC--------------C
T ss_pred chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC--------------C
Confidence 5789999999999999999999999999999999999998864322 235567888888888 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+. .+...++||||+ +++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||
T Consensus 70 hp~iv~~~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Ni 142 (294)
T 4eqm_A 70 HQNIVSMIDVDE----EDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNI 142 (294)
T ss_dssp BTTBCCEEEEEE----CSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGE
T ss_pred CCCCceEEEeee----eCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHE
Confidence 999999999886 677899999999 779999887653 489999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCc
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYR 251 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~ 251 (393)
+++.++ .++|+|||++...... .....||+.|+
T Consensus 143 l~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~ 179 (294)
T 4eqm_A 143 LIDSNK-------------------------------------------TLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179 (294)
T ss_dssp EECTTS-------------------------------------------CEEECCCSSSTTC-------------CCSSC
T ss_pred EECCCC-------------------------------------------CEEEEeCCCccccccccccccCccccCcccc
Confidence 998766 4999999998765432 22346899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||.+.+..++.++||||||+++|+|++|+.||.+.+ ..... .....+..|...
T Consensus 180 aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~--~~~~~~~~~~~~------------------ 233 (294)
T 4eqm_A 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET------AVSIA--IKHIQDSVPNVT------------------ 233 (294)
T ss_dssp CHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC------HHHHH--HHHHSSCCCCHH------------------
T ss_pred CHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHH--HHHhhccCCCcc------------------
Confidence 9999999999999999999999999999999997544 11111 111112221110
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
.......+..+.++|.+||..||.+||+..+.+.+.|
T Consensus 234 -----------------~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l 270 (294)
T 4eqm_A 234 -----------------TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDL 270 (294)
T ss_dssp -----------------HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred -----------------hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence 0122445678899999999999999995544444433
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=324.96 Aligned_cols=260 Identities=28% Similarity=0.400 Sum_probs=201.8
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---------ccchhhHHHHHHHHHhcccCCCCcccccC
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---------VYADTARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
..+.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------------- 72 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL------------- 72 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-------------
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-------------
Confidence 345679999999999999999999999999999999986432 1234578899999999
Q ss_pred cccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 95 ~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+|++++++.+. ... .++||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ |++||||||+
T Consensus 73 -~h~~i~~~~~~~~----~~~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~ 143 (322)
T 2ycf_A 73 -NHPCIIKIKNFFD----AED-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPE 143 (322)
T ss_dssp -CCTTBCCEEEEEE----SSS-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGG
T ss_pred -CCCCCceEeeEEc----CCc-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHH
Confidence 8999999988875 232 79999999 77998887654 4589999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCCCCc
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYR 251 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~~y~ 251 (393)
||+++.++. ...++|+|||++....... ....||+.|+
T Consensus 144 NIl~~~~~~----------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~ 183 (322)
T 2ycf_A 144 NVLLSSQEE----------------------------------------DCLIKITDFGHSKILGETSLMRTLCGTPTYL 183 (322)
T ss_dssp GEEESSSSS----------------------------------------SCCEEECCCTTCEECCCCHHHHHHHSCCTTC
T ss_pred HEEEecCCC----------------------------------------CCeEEEccCccceecccccccccccCCcCcc
Confidence 999975542 1249999999987654321 2235799999
Q ss_pred hhHHHh---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 252 SVEVLI---GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 252 aPE~~~---~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|||++. ...++.++|||||||++|+|++|..||....... .....+.......+...
T Consensus 184 aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~--------------- 243 (322)
T 2ycf_A 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-----SLKDQITSGKYNFIPEV--------------- 243 (322)
T ss_dssp CHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-----CHHHHHHHTCCCCCHHH---------------
T ss_pred CchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-----HHHHHHHhCccccCchh---------------
Confidence 999985 3567899999999999999999999997544321 11111111100111100
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+..+.+||.+||..||.+|||+.|+++||||.+
T Consensus 244 -----------------------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 244 -----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp -----------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred -----------------------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 1234678889999999999999999999999999986
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=321.20 Aligned_cols=261 Identities=27% Similarity=0.408 Sum_probs=203.7
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++....++|++.+.||+|+||.||+|.+..+++.||+|.+.... ..+.+.+|+.+++.+ .|+|+
T Consensus 22 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l--------------~h~~i 86 (314)
T 3com_A 22 SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC--------------DSPHV 86 (314)
T ss_dssp --------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC--------------CCTTB
T ss_pred hhhhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC--------------CCCCC
Confidence 345566789999999999999999999999999999999987643 456788999999998 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....++||||+ +++|.+++.... ..++...+..++.|++.||.|||+. |++|+||||+||+++.
T Consensus 87 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~ 160 (314)
T 3com_A 87 VKYYGSYF----KNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNT 160 (314)
T ss_dssp CCEEEEEE----ETTEEEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT
T ss_pred ccEEEEEE----eCCEEEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECC
Confidence 99999887 466789999999 668888876432 4589999999999999999999998 9999999999999977
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~ 256 (393)
++ .++|+|||++...... .....+|+.|+|||++
T Consensus 161 ~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~ 197 (314)
T 3com_A 161 EG-------------------------------------------HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI 197 (314)
T ss_dssp TC-------------------------------------------CEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHH
T ss_pred CC-------------------------------------------CEEEeecccchhhhhhccccCccCCCCCccChhhc
Confidence 66 4999999998765432 3345689999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++||||||+++|+|++|..||.... .......+.. +..+
T Consensus 198 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~-------------------------- 243 (314)
T 3com_A 198 QEIGYNCVADIWSLGITAIEMAEGKPPYADIH------PMRAIFMIPT--NPPP-------------------------- 243 (314)
T ss_dssp SSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SCCC--------------------------
T ss_pred CCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhc--CCCc--------------------------
Confidence 99889999999999999999999999996543 1111111111 1000
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....+...+..+.+||.+||..||.+|||+.++++||||++..
T Consensus 244 -----------~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 244 -----------TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp -----------CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred -----------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 0011233457888999999999999999999999999998764
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-42 Score=315.14 Aligned_cols=264 Identities=17% Similarity=0.236 Sum_probs=208.4
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.++.++++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+. .|++++
T Consensus 4 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~-------------~~~~i~ 69 (298)
T 1csn_A 4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLA-------------GCTGIP 69 (298)
T ss_dssp --CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTT-------------TCTTCC
T ss_pred cCcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHh-------------cCCCCC
Confidence 56788899999999999999999999999999999999887543 4567889999999984 567777
Q ss_pred eccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
++++.+. .+...++|||+++++|.+++.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 70 ~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~ 143 (298)
T 1csn_A 70 NVYYFGQ----EGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPN 143 (298)
T ss_dssp CEEEEEE----ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSS
T ss_pred eEEeecC----CCceeEEEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCC
Confidence 7777665 567799999999999999987643 3589999999999999999999998 999999999999997664
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYR 251 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~ 251 (393)
.. ....++|+|||++...... .....||+.|+
T Consensus 144 ~~--------------------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 185 (298)
T 1csn_A 144 SK--------------------------------------NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 185 (298)
T ss_dssp ST--------------------------------------TTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred CC--------------------------------------CCCeEEEEECccccccccccccccccccCccCCCCCcccC
Confidence 20 0124999999998765432 23446899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++.+..++.++||||||+++|+|++|+.||...+... ....+..+.......+...
T Consensus 186 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~------------------ 244 (298)
T 1csn_A 186 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT---NKQKYERIGEKKQSTPLRE------------------ 244 (298)
T ss_dssp CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC---HHHHHHHHHHHHHHSCHHH------------------
T ss_pred CchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc---cHHHHHHHHhhccCccHHH------------------
Confidence 9999999989999999999999999999999997654322 2222332222111111111
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+..+.++|.+||..||.+|||++++++.
T Consensus 245 -------------------~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~ 277 (298)
T 1csn_A 245 -------------------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 277 (298)
T ss_dssp -------------------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred -------------------HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 113456788999999999999999999998753
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=328.52 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=204.4
Q ss_pred CeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
++|++.+.||+|+||.||+|++. .+++.||||+++... ...+.+.+|+.+++.+. .|+|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h~~ 120 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-------------QSPF 120 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH-------------TCTT
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc-------------CCCc
Confidence 68999999999999999999985 478999999986432 23466788999999983 5889
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++++.+. .....++||||+ +++|.+.+.... .+++..+..++.|++.||+|||++ ||+||||||+|||++
T Consensus 121 iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~ 193 (355)
T 1vzo_A 121 LVTLHYAFQ----TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLD 193 (355)
T ss_dssp BCCEEEEEE----ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEC
T ss_pred eeEEEEEEe----eCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEC
Confidence 999988886 556799999999 779999887653 489999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVE 254 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE 254 (393)
.++ .+||+|||+++.... ......||+.|+|||
T Consensus 194 ~~~-------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE 230 (355)
T 1vzo_A 194 SNG-------------------------------------------HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230 (355)
T ss_dssp TTS-------------------------------------------CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHH
T ss_pred CCC-------------------------------------------cEEEeeCCCCeecccCCCCcccCcccCcCccChh
Confidence 766 499999999875432 123356899999999
Q ss_pred HHhcC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 255 VLIGA--GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 255 ~~~~~--~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
++.+. .++.++|||||||++|+|++|..||........ .......+.
T Consensus 231 ~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~----------------------------- 279 (355)
T 1vzo_A 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRIL----------------------------- 279 (355)
T ss_dssp HHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHH-----------------------------
T ss_pred hhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHh-----------------------------
Confidence 99863 478999999999999999999999975442211 111111111
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.....++...+..+.+||.+||..||.+|| |++|+++||||.+.
T Consensus 280 -------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 280 -------------KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp -------------HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred -------------ccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 111223345667888999999999999999 99999999999875
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-43 Score=323.15 Aligned_cols=257 Identities=24% Similarity=0.360 Sum_probs=206.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+|+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 68 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL--------------RHKNV 68 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC--------------CCTTB
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc--------------CCCCe
Confidence 3468999999999999999999999999999999987532 2346678899999888 78999
Q ss_pred eeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+++++.+. .......++||||+.+++.+.+.......+++..+..++.|++.||+|||++ |++|+||||+||+++.+
T Consensus 69 ~~~~~~~~--~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~ 145 (305)
T 2wtk_C 69 IQLVDVLY--NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTG 145 (305)
T ss_dssp CCEEEEEE--CC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTT
T ss_pred eEEEEEEE--cCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCC
Confidence 99998874 2245678999999987788888776556799999999999999999999998 99999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~ 255 (393)
+ .++|+|||++..... ......+|+.|+|||+
T Consensus 146 ~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 182 (305)
T 2wtk_C 146 G-------------------------------------------TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182 (305)
T ss_dssp C-------------------------------------------CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHH
T ss_pred C-------------------------------------------cEEeeccccccccCccccccccccCCCCCCCcChhh
Confidence 6 499999999876532 1234568999999999
Q ss_pred HhcCCC--CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 256 LIGAGY--GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 256 ~~~~~~--~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
+.+... +.++||||||+++|+|++|..||.+.+ .......+..
T Consensus 183 ~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~----------------------------- 227 (305)
T 2wtk_C 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGK----------------------------- 227 (305)
T ss_dssp HTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH-----------------------------
T ss_pred ccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhc-----------------------------
Confidence 987543 789999999999999999999997543 1222221111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....++...+..+.+||.+||..||.+|||++|+++||||++..
T Consensus 228 -------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 228 -------------GSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271 (305)
T ss_dssp -------------CCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred -------------CCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence 11123345567888999999999999999999999999998654
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=320.32 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=198.5
Q ss_pred cccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
...++.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+|+.+++.+....
T Consensus 23 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------- 95 (312)
T 2iwi_A 23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG------- 95 (312)
T ss_dssp ----------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSC-------
T ss_pred ccchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccC-------
Confidence 34567788999999999999999999999999999999999875432 2355678999999984322
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEee-c-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEV-M-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~-~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
.|+|++++++.+. .....++|||+ + +++|.+++.... .+++..+..++.|++.||+|||++ |++||||
T Consensus 96 ---~h~~i~~~~~~~~----~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl 165 (312)
T 2iwi_A 96 ---GHPGVIRLLDWFE----TQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDI 165 (312)
T ss_dssp ---CCSSBCCEEEEC---------CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH-TEECCCC
T ss_pred ---CCCCeeeEEEEEe----cCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCC
Confidence 6899999999886 55678999998 4 789999887653 489999999999999999999998 9999999
Q ss_pred CCCceEEe-echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-CCCCCCCCC
Q psy12288 171 KPENILMC-VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFADEIQTR 248 (393)
Q Consensus 171 kp~NIl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~t~ 248 (393)
||+||+++ .++ .++|+|||++..... ......+|.
T Consensus 166 kp~Nil~~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~ 202 (312)
T 2iwi_A 166 KDENILIDLRRG-------------------------------------------CAKLIDFGSGALLHDEPYTDFDGTR 202 (312)
T ss_dssp SGGGEEEETTTT-------------------------------------------EEEECCCSSCEECCSSCBCCCCSCT
T ss_pred ChhhEEEeCCCC-------------------------------------------eEEEEEcchhhhcccCcccccCCcc
Confidence 99999997 444 599999999876543 334557899
Q ss_pred CCchhHHHhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 249 QYRSVEVLIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 249 ~y~aPE~~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
.|+|||++.+..+ +.++||||||+++|+|++|+.||.... .+.
T Consensus 203 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~------------------------ 246 (312)
T 2iwi_A 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EIL------------------------ 246 (312)
T ss_dssp TTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHH------------------------
T ss_pred cccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHh------------------------
Confidence 9999999988766 458999999999999999999995311 010
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
.....++...+..+.++|.+||..||++|||++|+++||||+...+
T Consensus 247 ------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 247 ------------------EAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp ------------------HTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred ------------------hhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 1111233455678889999999999999999999999999998654
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=317.00 Aligned_cols=253 Identities=25% Similarity=0.383 Sum_probs=207.4
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
....++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ .|+|++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 83 (303)
T 3a7i_A 18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC--------------DSPYVT 83 (303)
T ss_dssp ECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred CChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC--------------CCCCEe
Confidence 344678999999999999999999999999999999987543 2346778999999998 889999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .....++||||+ +++|.+++.. ..++...+..++.|++.||.+||++ |++|+||||+||+++.+
T Consensus 84 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~ 155 (303)
T 3a7i_A 84 KYYGSYL----KDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEH 155 (303)
T ss_dssp CEEEEEE----ETTEEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT
T ss_pred EEEEEEe----cCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCC
Confidence 9999887 456799999999 6788888754 3489999999999999999999998 99999999999999766
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~ 257 (393)
+ .++|+|||++...... .....+|+.|+|||++.
T Consensus 156 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 192 (303)
T 3a7i_A 156 G-------------------------------------------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 192 (303)
T ss_dssp S-------------------------------------------CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHT
T ss_pred C-------------------------------------------CEEEeecccceecCccccccCccCCCcCccCHHHHh
Confidence 6 4999999998765432 33456899999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++||||||+++|+|++|..||.... .......+.. +..
T Consensus 193 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~---------------------------- 236 (303)
T 3a7i_A 193 QSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVLFLIPK--NNP---------------------------- 236 (303)
T ss_dssp TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SCC----------------------------
T ss_pred cCCCCchhhhHHHHHHHHHHccCCCCCCCcC------HHHHHHHhhc--CCC----------------------------
Confidence 9889999999999999999999999996543 1111111111 000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..++...+..+.+||.+||..||.+|||+.|+++||||..
T Consensus 237 -----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 237 -----------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp -----------CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred -----------CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence 0122345667889999999999999999999999999954
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=327.76 Aligned_cols=278 Identities=24% Similarity=0.367 Sum_probs=210.6
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc------------------hhhHHHHHHHHHhc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA------------------DTARDEIVLLKAVG 82 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------~~~~~E~~~l~~l~ 82 (393)
..++.+.++|++.+.||+|+||.||+|.+ +++.||+|++....... +.+.+|+.+++.+
T Consensus 24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 100 (348)
T 2pml_X 24 KEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI- 100 (348)
T ss_dssp SSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-
T ss_pred hhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-
Confidence 45667778999999999999999999998 89999999987432211 6788999999998
Q ss_pred ccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHH------HHhcCCCCCCHHHHHHHHHHHHHH
Q psy12288 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRL------IARSDYKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~------~~~~~~~~l~~~~~~~i~~ql~~~ 155 (393)
.|+|++++++.+. .....++||||+ +++|.++ +.......+++..+..++.|++.|
T Consensus 101 -------------~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~ 163 (348)
T 2pml_X 101 -------------KNEYCLTCEGIIT----NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNS 163 (348)
T ss_dssp -------------CCTTBCCCSEEEE----SSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred -------------CCCCcceEEEEEe----eCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHH
Confidence 7999999999887 567899999999 5688877 544334568999999999999999
Q ss_pred HHHhhh-cCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcc
Q psy12288 156 LNYLHT-QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234 (393)
Q Consensus 156 l~~lH~-~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~ 234 (393)
|+|||+ + |++|+||||+||+++.++ .++|+|||.+
T Consensus 164 l~~lH~~~-~i~H~dl~p~Nil~~~~~-------------------------------------------~~kl~dfg~~ 199 (348)
T 2pml_X 164 FSYIHNEK-NICHRDVKPSNILMDKNG-------------------------------------------RVKLSDFGES 199 (348)
T ss_dssp HHHHHHTS-CEECCCCCGGGEEECTTS-------------------------------------------CEEECCCTTC
T ss_pred HHHHhccC-CEeecCCChHhEEEcCCC-------------------------------------------cEEEeccccc
Confidence 999998 7 999999999999997766 4999999998
Q ss_pred ccccC-CCCCCCCCCCCchhHHHhcC-CCCc-hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 235 CWIDD-HFADEIQTRQYRSVEVLIGA-GYGP-AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 235 ~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~-~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
..... ......+|..|+|||++.+. .++. ++||||||+++|+|++|..||...... ......+.......|.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~i~~~~~~~~~ 274 (348)
T 2pml_X 200 EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELFNNIRTKNIEYPL 274 (348)
T ss_dssp EECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHHHHHTSCCCCCCC
T ss_pred cccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHHhccCcCCcc
Confidence 76533 34456789999999999887 5655 999999999999999999999765421 2222222111111111
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
... .+.. ..... .........+..+.+||.+||+.||.+|||+.|+++||||++..
T Consensus 275 ~~~-------~~~~---------~~~~~-------~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 275 DRN-------HFLY---------PLTNK-------KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN 330 (348)
T ss_dssp SSS-------SSTT---------TTCC---------------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred chh-------hhhc---------ccccc-------ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence 000 0000 00000 00011134567889999999999999999999999999998754
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=309.36 Aligned_cols=245 Identities=19% Similarity=0.320 Sum_probs=201.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+.+++.+ .|+|++++++.+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~~~ 74 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------------SHPKLVQLYGVC 74 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC--------------CCTTBCCEEEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhC--------------CCCCEeeEEEEE
Confidence 58999999999999999999887 467799999987766677889999999999 789999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....++||||+ +++|.+++.... ..++...+..++.|++.||++||++ |++||||||+||+++.++
T Consensus 75 ~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~----- 143 (269)
T 4hcu_A 75 L----EQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQ----- 143 (269)
T ss_dssp C----SSSSEEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGG-----
T ss_pred e----cCCceEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCC-----
Confidence 6 566799999999 678888876543 4589999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++..... ......+|+.|+|||++.+..++
T Consensus 144 --------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 185 (269)
T 4hcu_A 144 --------------------------------------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185 (269)
T ss_dssp --------------------------------------CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCC
T ss_pred --------------------------------------CEEeccccccccccccccccccCcccccccCCHHHhcCCCCC
Confidence 499999999875532 23344567889999999999999
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++||||||+++|+|++ |..||...+ .......+.....
T Consensus 186 ~~~Di~slG~~l~~ll~~g~~p~~~~~------~~~~~~~~~~~~~---------------------------------- 225 (269)
T 4hcu_A 186 SKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGFR---------------------------------- 225 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTCC----------------------------------
T ss_pred chhhhHHHHHHHHHHhcCCCCCCCCCC------HHHHHHHHhcCcc----------------------------------
Confidence 99999999999999999 999997544 2222222211100
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.+++.+||..||++|||+.|+++|
T Consensus 226 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 226 -------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 01123446778899999999999999999999976
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=315.27 Aligned_cols=248 Identities=17% Similarity=0.185 Sum_probs=201.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEec-ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKS-DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.++|++.++||+|+||.||+|.+..+++.||+|.+.. .....+.+.+|+.+++.+ .|+||+++++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~~~ 74 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL--------------EHPNVLKFIG 74 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC--------------CCTTBCCEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC--------------CCcCcccEEE
Confidence 3689999999999999999999999999999998754 233456678899999888 7999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .+...++||||+ +++|.+++.... ..+++.++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 75 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~--- 145 (310)
T 3s95_A 75 VLY----KDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENK--- 145 (310)
T ss_dssp EEE----ETTEEEEEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTS---
T ss_pred EEe----cCCeeEEEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCC---
Confidence 887 567799999999 779988887643 4589999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----------------CCCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----------------ADEIQT 247 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----------------~~~~~t 247 (393)
.++|+|||++....... ....||
T Consensus 146 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 185 (310)
T 3s95_A 146 ----------------------------------------NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185 (310)
T ss_dssp ----------------------------------------CEEECCCTTCEECC--------------------CCCCSC
T ss_pred ----------------------------------------CEEEeecccceecccccccccccccccccccccccccCCC
Confidence 49999999987653221 145689
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
+.|+|||++.+..++.++||||||+++|+|++|..||..............
T Consensus 186 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----------------------------- 236 (310)
T 3s95_A 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV----------------------------- 236 (310)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH-----------------------------
T ss_pred cceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh-----------------------------
Confidence 999999999999999999999999999999999999875443221100000
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..... ...+...+..+.++|.+||..||++|||+.++++
T Consensus 237 --------------~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 237 --------------RGFLD--RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp --------------HHHHH--HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------------hcccc--ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 00010 1123455667889999999999999999999886
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=318.77 Aligned_cols=278 Identities=14% Similarity=0.172 Sum_probs=208.0
Q ss_pred ccccCCeeC----CeEEEEEEecccCceEEEEEEeCCC-----CceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc
Q psy12288 19 PVQIGDLFN----FRYHVIRKLGWGHFSTVWLSWDLQD-----KTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 19 ~~~~~~~~~----~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
++..|+.+. ++|++.+.||+|+||.||+|.+..+ ++.||||++.... ....+|+.+++.+.+...+..
T Consensus 22 ~~~~g~~i~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e 98 (364)
T 3op5_A 22 QFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQK 98 (364)
T ss_dssp CCCTTCEEECTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHH
T ss_pred hcCCCcEeeccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHH
Confidence 456676665 4999999999999999999998765 5789999987543 456778888887765322111
Q ss_pred -ccccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 90 -SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 90 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.......|+||+++++.+........+.++||||++++|.+++.... ..+++..+..++.||+.||+|||++ ||+||
T Consensus 99 ~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHr 176 (364)
T 3op5_A 99 WIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEH-EYVHG 176 (364)
T ss_dssp HHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECC
T ss_pred HHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEEe
Confidence 11122379999999999886655567899999999999999887642 4599999999999999999999998 99999
Q ss_pred cCCCCceEEe--echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------
Q psy12288 169 DIKPENILMC--VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------ 240 (393)
Q Consensus 169 dlkp~NIl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------ 240 (393)
||||+|||++ .++ .+||+|||+++.....
T Consensus 177 Dlkp~Nill~~~~~~-------------------------------------------~~kl~DFG~a~~~~~~~~~~~~ 213 (364)
T 3op5_A 177 DIKASNLLLNYKNPD-------------------------------------------QVYLVDYGLAYRYCPEGVHKAY 213 (364)
T ss_dssp CCCGGGEEEESSCTT-------------------------------------------CEEECCCTTCEESSGGGCCCCS
T ss_pred cCCHHHEEEecCCCC-------------------------------------------eEEEEECCcceecccCCccccc
Confidence 9999999998 433 5999999999765321
Q ss_pred ----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHH-HhCCCChHHHh
Q psy12288 241 ----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLS 315 (393)
Q Consensus 241 ----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~g~~p~~~~~ 315 (393)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.... ......... ....++.
T Consensus 214 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-----~~~~~~~~~~~~~~~~~---- 284 (364)
T 3op5_A 214 AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-----PKYVRDSKIRYRENIAS---- 284 (364)
T ss_dssp SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-----HHHHHHHHHHHHHCHHH----
T ss_pred ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-----HHHHHHHHHHhhhhHHH----
Confidence 12345899999999999999999999999999999999999999753321 111111111 1111100
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...... .....+..+.++|.+||..||.+||+++++++
T Consensus 285 ----------------------------~~~~~~-~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 285 ----------------------------LMDKCF-PAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp ----------------------------HHHHHS-CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred ----------------------------HHHHhc-ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 000000 01234678899999999999999999998875
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-42 Score=315.73 Aligned_cols=260 Identities=23% Similarity=0.360 Sum_probs=198.5
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+.++|++.+.||+|+||.||+|.+..+++.||||++.......+.+.+|+.+++.+ .|+|++++++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 69 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--------------NHQYVVRYYA 69 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC--------------CCTTBCCEEE
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc--------------CchHHHHHHH
Confidence 35689999999999999999999999999999999976555556788899999988 7889999888
Q ss_pred cceee---------cCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 106 DFKIY---------SRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 106 ~~~~~---------~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
.+... .......++||||+ +++|.+.+.... ..++...+..++.|++.||+|||++ |++|+||||+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Ni 147 (303)
T 1zy4_A 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNI 147 (303)
T ss_dssp EEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGE
T ss_pred HHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhE
Confidence 76531 12357899999999 679999887543 3478889999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----------------
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---------------- 239 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---------------- 239 (393)
+++.++ .++|+|||++.....
T Consensus 148 l~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 184 (303)
T 1zy4_A 148 FIDESR-------------------------------------------NVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184 (303)
T ss_dssp EECTTS-------------------------------------------CEEECCCCCCSCTTC----------------
T ss_pred EEcCCC-------------------------------------------CEEEeeCcchhhcccccchhccccccccccc
Confidence 997666 499999999876532
Q ss_pred -CCCCCCCCCCCchhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcC
Q psy12288 240 -HFADEIQTRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317 (393)
Q Consensus 240 -~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 317 (393)
......+|+.|+|||++.+. .++.++||||||+++|+|++ ||..... .......+.......|.
T Consensus 185 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~-----~~~~~~~~~~~~~~~~~------ 250 (303)
T 1zy4_A 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME-----RVNILKKLRSVSIEFPP------ 250 (303)
T ss_dssp ---------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----HHHHHHHHHSTTCCCCT------
T ss_pred cccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh-----HHHHHHhccccccccCc------
Confidence 12334688999999999865 58999999999999999998 4531110 01111111111011111
Q ss_pred cccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.++...+..+.++|++||..||.+|||+.|+++||||+...
T Consensus 251 --------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (303)
T 1zy4_A 251 --------------------------------DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH 291 (303)
T ss_dssp --------------------------------TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred --------------------------------cccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence 12344566788999999999999999999999999998643
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=312.51 Aligned_cols=251 Identities=27% Similarity=0.401 Sum_probs=196.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
..||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|++++++.+.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~iv~~~~~~~---- 89 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL--------------KHKNIVQYLGSFS---- 89 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC--------------CCTTBCCEEEEEE----
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC--------------CCCCEeeEeeEEE----
Confidence 48999999999999999999999999987543 3356688999999998 7999999999886
Q ss_pred CCeEEEEEEeec-cccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee-chhHHhHhhh
Q psy12288 113 NGTHICMVFEVM-GYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV-DYDKVRRMAR 189 (393)
Q Consensus 113 ~~~~~~iv~e~~-~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~-~~~~~~~~~~ 189 (393)
.....++|||++ +++|.+.+.... ...+++..+..++.|++.||+|||++ |++|+||||+||+++. ++
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~-------- 160 (295)
T 2clq_A 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSG-------- 160 (295)
T ss_dssp ETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTC--------
T ss_pred eCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCC--------
Confidence 556799999999 789888886642 22466888999999999999999998 9999999999999976 33
Q ss_pred hhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC--CCch
Q psy12288 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG--YGPA 264 (393)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~--~~~~ 264 (393)
.++|+|||++...... .....+|+.|+|||++.+.. ++.+
T Consensus 161 -----------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 205 (295)
T 2clq_A 161 -----------------------------------VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205 (295)
T ss_dssp -----------------------------------CEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHH
T ss_pred -----------------------------------CEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcH
Confidence 4999999998765422 33456899999999998754 7899
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 265 ~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
+||||||+++|+|++|+.||..... ....... .....
T Consensus 206 ~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~-~~~~~------------------------------------- 242 (295)
T 2clq_A 206 ADIWSLGCTIIEMATGKPPFYELGE-----PQAAMFK-VGMFK------------------------------------- 242 (295)
T ss_dssp HHHHHHHHHHHHHHHTSCTTGGGSS-----HHHHHHH-HHHHC-------------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCccCCCc-----hhHHHHh-hcccc-------------------------------------
Confidence 9999999999999999999964321 0111000 00001
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....++...+..+.++|.+||..||++|||+.|+++||||+....
T Consensus 243 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 243 --VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287 (295)
T ss_dssp --CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred --ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence 011123455678899999999999999999999999999987643
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=315.74 Aligned_cols=263 Identities=19% Similarity=0.218 Sum_probs=200.9
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+++.+.++|++.+.||+|+||.||+|.+ +++.||||++... .......|.+++.... ..|+|++
T Consensus 2 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~------------l~h~niv 65 (301)
T 3q4u_A 2 MQRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR--DEKSWFRETELYNTVM------------LRHENIL 65 (301)
T ss_dssp --CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHTC------------CCCTTBC
T ss_pred ccccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc--cchhhHHHHHHHHHhh------------ccCcCee
Confidence 4567888999999999999999999977 6889999998754 2355567777777742 1799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCeeeccCCC
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLH--------TQCRIIHTDIKP 172 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH--------~~~~i~H~dlkp 172 (393)
++++.+..........++||||+ +++|.+++.. ..+++..+..++.|++.||+||| +. +++||||||
T Consensus 66 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp 141 (301)
T 3q4u_A 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKS 141 (301)
T ss_dssp CEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCG
T ss_pred eEEEeeccccCCCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCCh
Confidence 99998776555677899999999 6799998854 34899999999999999999999 87 999999999
Q ss_pred CceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCC
Q psy12288 173 ENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEI 245 (393)
Q Consensus 173 ~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~ 245 (393)
+||+++.++ .+||+|||++...... .....
T Consensus 142 ~Nill~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 178 (301)
T 3q4u_A 142 KNILVKKNG-------------------------------------------QCCIADLGLAVMHSQSTNQLDVGNNPRV 178 (301)
T ss_dssp GGEEECTTS-------------------------------------------CEEECCCTTCEEEETTTTEEECCCCCCC
T ss_pred HhEEEcCCC-------------------------------------------CEEEeeCCCeeecccccccccccccccc
Confidence 999998666 4999999998654322 22347
Q ss_pred CCCCCchhHHHhcC------CCCchhhHHhHHHHHHHHHhC----------CCCCCCCCCCCCCCcHHHHHHHHHHhCCC
Q psy12288 246 QTRQYRSVEVLIGA------GYGPAADIWSTACMAFELATG----------DYLFDPKAGKEYSRDDDHLAHIVELVGPI 309 (393)
Q Consensus 246 ~t~~y~aPE~~~~~------~~~~~~DiwSlG~~l~ell~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~g~~ 309 (393)
||+.|+|||++.+. .++.++||||||+++|+|++| ..||........ ....+.......+..
T Consensus 179 gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~--~~~~~~~~~~~~~~~ 256 (301)
T 3q4u_A 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP--SFEDMRKVVCVDQQR 256 (301)
T ss_dssp CCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHHHHHTTSCCC
T ss_pred cccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc--chhhhhHHHhccCCC
Confidence 89999999999876 345799999999999999999 778865433221 112222221111111
Q ss_pred ChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 310 PKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 310 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
|.. +...++...+..+.+||.+||..||++|||+.|+++.
T Consensus 257 ~~~----------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 257 PNI----------------------------------PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp CCC----------------------------------CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred CCC----------------------------------ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 000 0001224577889999999999999999999999863
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=320.03 Aligned_cols=267 Identities=25% Similarity=0.354 Sum_probs=184.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...++|++.+.||+|+||.||+|.+..+++.||||.+.... .....+.+|+.+++.+ .|+|+++
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~ 77 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC--------------HHPNIVS 77 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC--------------CCTTBCC
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc--------------CCCCEee
Confidence 34579999999999999999999999999999999876432 2234455666666555 7999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
+++.+. .....++||||+ +++|.+++... ....++...+..++.|++.||+|||++ |++|+||||+||
T Consensus 78 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Ni 152 (303)
T 2vwi_A 78 YYTSFV----VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNI 152 (303)
T ss_dssp EEEEEE----SSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGE
T ss_pred EEEEEe----ecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhE
Confidence 999887 556799999999 78988887641 234489999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------CCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--------FADEIQT 247 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--------~~~~~~t 247 (393)
+++.++ .++|+|||++...... .....+|
T Consensus 153 l~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
T 2vwi_A 153 LLGEDG-------------------------------------------SVQIADFGVSAFLATGGDITRNKVRKTFVGT 189 (303)
T ss_dssp EECTTC-------------------------------------------CEEECCCHHHHHCC---------------CC
T ss_pred EEcCCC-------------------------------------------CEEEEeccchheeccCCCccchhhhcccCCC
Confidence 997766 4999999988654321 2234689
Q ss_pred CCCchhHHHhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 248 RQYRSVEVLIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 248 ~~y~aPE~~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
+.|+|||++.+ ..++.++||||||+++|+|++|..||..... ........ .+..+. ...
T Consensus 190 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~--~~~~~~-~~~----------- 249 (303)
T 2vwi_A 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP------MKVLMLTL--QNDPPS-LET----------- 249 (303)
T ss_dssp CTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG------GGHHHHHH--TSSCCC-TTC-----------
T ss_pred ccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch------hhHHHHHh--ccCCCc-ccc-----------
Confidence 99999999976 4689999999999999999999999976442 11111111 111000 000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
...........+..+.++|.+||..||.+|||+.|+++||||++.+.
T Consensus 250 ------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 250 ------------------GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296 (303)
T ss_dssp -----------------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred ------------------ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence 00001112344567889999999999999999999999999998654
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-42 Score=312.28 Aligned_cols=256 Identities=21% Similarity=0.328 Sum_probs=204.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+ .|+|+++++
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~ 71 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL--------------KHPNIVRYY 71 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC--------------CCTTBCCEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc--------------CCCCCCeEE
Confidence 58999999999999999999999999999999987532 2345678899999998 789999998
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCC-----eeeccCCCCceE
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--YKGIHIQNVRTIIKQVLEGLNYLHTQCR-----IIHTDIKPENIL 176 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~l~~~~~~~i~~ql~~~l~~lH~~~~-----i~H~dlkp~NIl 176 (393)
+.+.. ..+...++||||+ +++|.+++.... ...+++..+..++.|++.||++||++ + ++|+||||+||+
T Consensus 72 ~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl 148 (279)
T 2w5a_A 72 DRIID--RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVF 148 (279)
T ss_dssp EEEEE--GGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEE
T ss_pred EEEec--CCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEE
Confidence 87642 2456799999999 679998886532 23488999999999999999999998 8 999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---CCCCCCCCCchh
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---ADEIQTRQYRSV 253 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~t~~y~aP 253 (393)
++.++ .++|+|||++....... ....+|+.|+||
T Consensus 149 ~~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 185 (279)
T 2w5a_A 149 LDGKQ-------------------------------------------NVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185 (279)
T ss_dssp ECSSS-------------------------------------------CEEECCCCHHHHC---CHHHHHHHSCCTTCCH
T ss_pred EcCCC-------------------------------------------CEEEecCchheeeccccccccccCCCccccCh
Confidence 98766 49999999987654321 123578999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+..++.++||||||+++|+|++|..||...+ .......+.. +..+
T Consensus 186 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~--~~~~----------------------- 234 (279)
T 2w5a_A 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKELAGKIRE--GKFR----------------------- 234 (279)
T ss_dssp HHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--TCCC-----------------------
T ss_pred HHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC------HHHHHHHHhh--cccc-----------------------
Confidence 99999889999999999999999999999997543 2222221111 1100
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.++...+..+.++|.+||..||.+|||+.|+++|+|+.+-.
T Consensus 235 ----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 235 ----------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp ----------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred ----------------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 12234567889999999999999999999999999998644
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=309.03 Aligned_cols=258 Identities=22% Similarity=0.263 Sum_probs=194.9
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.++++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+ .|++++..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l--------------~~~~~i~~~ 70 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM--------------QGGVGIPTI 70 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHH--------------TTSTTCCCE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHh--------------cCCCCCCee
Confidence 45679999999999999999999999999999999876543 346788999999999 444444444
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
..+. ..+...++|||+++++|.+++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.+..
T Consensus 71 ~~~~---~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~-- 143 (296)
T 4hgt_A 71 RWCG---AEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKK-- 143 (296)
T ss_dssp EEEE---EETTEEEEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGG--
T ss_pred eeec---CCCCceEEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCC--
Confidence 4332 2456789999999999999887543 4589999999999999999999998 9999999999999942221
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhH
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVE 254 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE 254 (393)
...+||+|||++...... .....+|+.|+|||
T Consensus 144 --------------------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 185 (296)
T 4hgt_A 144 --------------------------------------GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 185 (296)
T ss_dssp --------------------------------------TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHH
T ss_pred --------------------------------------CCeEEEecCccceeccCcccCccCCCCcccccCCCccccchH
Confidence 115999999998765432 12457899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++|||||||++|+|++|+.||...+........ ..+....-..|...
T Consensus 186 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------------- 241 (296)
T 4hgt_A 186 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY---ERISEKKMSTPIEV--------------------- 241 (296)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH---HHHHHHHHHSCHHH---------------------
T ss_pred HhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh---hhhhcccccchhhh---------------------
Confidence 999999999999999999999999999999876544322211 11111111111110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.....+..+.++|.+||+.||++|||++++++
T Consensus 242 ----------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 242 ----------------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp ----------------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred ----------------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 11334678899999999999999999999876
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=313.49 Aligned_cols=248 Identities=20% Similarity=0.261 Sum_probs=192.2
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc---chhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY---ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
...++|++.+.||+|+||.||+|.+ +++.||+|++...... .+.+.+|+.+++.+ .|+|++
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv 97 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL--------------RHPNIV 97 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC--------------CCCCEe
Confidence 3357999999999999999999976 5888999998754322 34577899999999 799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEE
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILM 177 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~ 177 (393)
++++.+. .....++||||+ +++|.+.+..... ..+++..+..++.|++.||+|||++ | ++||||||+||++
T Consensus 98 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll 172 (309)
T 3p86_A 98 LFMGAVT----QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLV 172 (309)
T ss_dssp CEEEEEC----STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEE
T ss_pred eEEEEEE----ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEE
Confidence 9999886 556689999999 7799888865421 1288999999999999999999998 9 9999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVE 254 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE 254 (393)
+.++ .+||+|||++...... .....||+.|+|||
T Consensus 173 ~~~~-------------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE 209 (309)
T 3p86_A 173 DKKY-------------------------------------------TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE 209 (309)
T ss_dssp CTTC-------------------------------------------CEEECCCC-----------------CCTTSCHH
T ss_pred eCCC-------------------------------------------cEEECCCCCCccccccccccccCCCCccccChh
Confidence 8766 4999999998754332 33457899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++||||||+++|+|++|..||...+ .......+.. ..
T Consensus 210 ~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~------~~~~~~~~~~-~~--------------------------- 255 (309)
T 3p86_A 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN------PAQVVAAVGF-KC--------------------------- 255 (309)
T ss_dssp HHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC------HHHHHHHHHH-SC---------------------------
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh-cC---------------------------
Confidence 9999999999999999999999999999997544 2222111111 00
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....++...+..+.+||.+||..||.+|||+.++++
T Consensus 256 ------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 256 ------------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp ------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 111233456678999999999999999999999987
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=310.98 Aligned_cols=250 Identities=18% Similarity=0.235 Sum_probs=207.5
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++..++|++.+.||+|+||.||+|.+..++..||+|.+.......+.+.+|+.+++.+ .|+|++++
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~ 74 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------------KHPNLVQL 74 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC--------------CCTTBCCE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC--------------CCCCEeeE
Confidence 3456799999999999999999999999999999999987766677889999999999 78999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .....++|||++ +++|.+++.......++...+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 75 ~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~- 148 (288)
T 3kfa_A 75 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENH- 148 (288)
T ss_dssp EEEEC----SSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGG-
T ss_pred EEEEc----cCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCC-
Confidence 99876 566789999999 68999999876656699999999999999999999999 999999999999997766
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhc
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~ 258 (393)
.++|+|||++....... ....+|+.|+|||++.+
T Consensus 149 ------------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 186 (288)
T 3kfa_A 149 ------------------------------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186 (288)
T ss_dssp ------------------------------------------CEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHH
T ss_pred ------------------------------------------CEEEccCccceeccCCccccccCCccccCcCChhhhcc
Confidence 49999999987654322 22345778999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++||||||+++|+|++ |..||...+. ......+...
T Consensus 187 ~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~------~~~~~~~~~~-------------------------------- 228 (288)
T 3kfa_A 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEKD-------------------------------- 228 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHHHHTT--------------------------------
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhcc--------------------------------
Confidence 999999999999999999999 9999975442 1111111110
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.....+...+..+.++|++||..||.+|||+.|+++
T Consensus 229 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 229 ---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 001122445678899999999999999999999976
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=313.36 Aligned_cols=258 Identities=24% Similarity=0.394 Sum_probs=199.9
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
....+++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|+.+++.+.+ .|+|
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~------------~~~~ 89 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ------------HSDK 89 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG------------GCTT
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc------------cCCc
Confidence 3345679999999999999999999885 58889999986532 234667899999999942 3588
Q ss_pred ceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
++++++.+. .....++|||+.+++|.+.+... ..++...+..++.|++.||+|||++ |++||||||+||+++.
T Consensus 90 iv~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~ 162 (313)
T 3cek_A 90 IIRLYDYEI----TDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD 162 (313)
T ss_dssp BCCEEEEEE----CSSEEEEEECCCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET
T ss_pred eEEEEEEee----cCCEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEEC
Confidence 999998877 66789999998799999998765 3588999999999999999999998 9999999999999953
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVE 254 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE 254 (393)
+ .++|+|||++...... .....+|+.|+|||
T Consensus 163 -~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE 198 (313)
T 3cek_A 163 -G-------------------------------------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198 (313)
T ss_dssp -T-------------------------------------------EEEECCCSSSCC--------------CCGGGCCHH
T ss_pred -C-------------------------------------------eEEEeeccccccccCccccccccCCCCCCCcCCHH
Confidence 3 4999999998765432 12346899999999
Q ss_pred HHhc-----------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccc
Q psy12288 255 VLIG-----------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323 (393)
Q Consensus 255 ~~~~-----------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~ 323 (393)
++.+ ..++.++||||||+++|+|++|..||..... .. ..........
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~---~~~~~~~~~~-------------- 256 (313)
T 3cek_A 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QI---SKLHAIIDPN-------------- 256 (313)
T ss_dssp HHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HH---HHHHHHHCTT--------------
T ss_pred HHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HH---HHHHHHHhcc--------------
Confidence 9976 3578899999999999999999999964331 11 1111111110
Q ss_pred cCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||.+|||+.|+++||||+..
T Consensus 257 -----------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 299 (313)
T 3cek_A 257 -----------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299 (313)
T ss_dssp -----------------------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred -----------------------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence 0011223345678899999999999999999999999999764
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=309.88 Aligned_cols=260 Identities=17% Similarity=0.226 Sum_probs=203.7
Q ss_pred cccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--------chhhHHHHHHHHHhcccCCCCccc
Q psy12288 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--------ADTARDEIVLLKAVGRKSNVHSSA 91 (393)
Q Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~~ 91 (393)
..++....++|++.+.||+|+||.||+|.+..+++.||+|++...... .+.+.+|+.+++.+
T Consensus 11 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---------- 80 (287)
T 4f0f_A 11 SRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL---------- 80 (287)
T ss_dssp -CCCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC----------
T ss_pred hhhhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC----------
Confidence 345566678999999999999999999999999999999998643221 15677899999988
Q ss_pred ccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeec
Q psy12288 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHT 168 (393)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~ 168 (393)
.|+|++++++.+. ... ++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ | ++||
T Consensus 81 ----~h~~i~~~~~~~~----~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~ 148 (287)
T 4f0f_A 81 ----NHPNIVKLYGLMH----NPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHR 148 (287)
T ss_dssp ----CCTTBCCEEEEET----TTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCS
T ss_pred ----CCCCchhhheeec----CCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC-CCCeecC
Confidence 7999999998875 332 6899999 689988886543 4589999999999999999999998 9 9999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~ 248 (393)
||||+||+++.++.. ....++|+|||++...........+|+
T Consensus 149 dikp~Nil~~~~~~~--------------------------------------~~~~~kl~Dfg~~~~~~~~~~~~~g~~ 190 (287)
T 4f0f_A 149 DLRSPNIFLQSLDEN--------------------------------------APVCAKVADFGLSQQSVHSVSGLLGNF 190 (287)
T ss_dssp CCSGGGEEESCCCTT--------------------------------------CSCCEEECCCTTCBCCSSCEECCCCCC
T ss_pred CCCcceEEEeccCCC--------------------------------------CceeEEeCCCCccccccccccccCCCc
Confidence 999999999765420 012489999999987666666678899
Q ss_pred CCchhHHHh--cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 249 QYRSVEVLI--GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 249 ~y~aPE~~~--~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
.|+|||++. ...++.++||||||+++|+|++|+.||...+.. ...........+..
T Consensus 191 ~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~----------------- 248 (287)
T 4f0f_A 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFINMIREEGLR----------------- 248 (287)
T ss_dssp TTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHHHHHHSCCC-----------------
T ss_pred cccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHHHHhccCCC-----------------
Confidence 999999984 345789999999999999999999999754422 11111111111111
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..++...+..+.++|.+||..||.+|||++|+++.
T Consensus 249 ----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 249 ----------------------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp ----------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----------------------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 11234566789999999999999999999999863
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=326.60 Aligned_cols=258 Identities=17% Similarity=0.218 Sum_probs=202.2
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEE-----eCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccC
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSW-----DLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
+.+...++|++.++||+|+||.||+|. +..+++.||||+++.. ......+.+|+.+++.+
T Consensus 65 ~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------------- 131 (367)
T 3l9p_A 65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF------------- 131 (367)
T ss_dssp SCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-------------
T ss_pred hhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-------------
Confidence 345556899999999999999999999 4456788999998643 22234577899999998
Q ss_pred cccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-----KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 95 ~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|+||+++++.+. .....++||||+ +++|.+++..... ..++..++..++.|++.||+|||++ ||+||
T Consensus 132 -~hpnIv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHr 205 (367)
T 3l9p_A 132 -NHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHR 205 (367)
T ss_dssp -CCTTBCCEEEEEC----SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCS
T ss_pred -CCCCCCeEEEEEe----cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCC
Confidence 8999999999886 556679999999 7899999876431 3488999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFAD 243 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~ 243 (393)
||||+|||++.++. ...+||+|||+++... .....
T Consensus 206 Dlkp~NIll~~~~~----------------------------------------~~~~kL~DFG~a~~~~~~~~~~~~~~ 245 (367)
T 3l9p_A 206 DIAARNCLLTCPGP----------------------------------------GRVAKIGDFGMARDIYRAGYYRKGGC 245 (367)
T ss_dssp CCCGGGEEESCSST----------------------------------------TCCEEECCCHHHHHHHHHSSCTTCCG
T ss_pred CCChhhEEEecCCC----------------------------------------CceEEECCCccccccccccccccCCC
Confidence 99999999975542 1149999999987542 12233
Q ss_pred CCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccc
Q psy12288 244 EIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322 (393)
Q Consensus 244 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 322 (393)
..+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+ ....+..+... ..
T Consensus 246 ~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~------~~~~~~~i~~~-~~-------------- 304 (367)
T 3l9p_A 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLEFVTSG-GR-------------- 304 (367)
T ss_dssp GGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHTT-CC--------------
T ss_pred cCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-CC--------------
Confidence 457889999999999999999999999999999998 999997544 22222221110 00
Q ss_pred ccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCC
Q psy12288 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385 (393)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 385 (393)
...+...+..+.+||.+||..||.+|||+.+++++.+
T Consensus 305 --------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 305 --------------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp --------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --------------------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1122345667889999999999999999999998854
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=306.24 Aligned_cols=260 Identities=22% Similarity=0.257 Sum_probs=200.2
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
-.++++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+ .|++++..
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l--------------~~~~~i~~ 69 (296)
T 3uzp_A 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM--------------QGGVGIPT 69 (296)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH--------------TTSTTCCC
T ss_pred ceeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh--------------hcCCCCCc
Confidence 346679999999999999999999999999999999987543 346788999999999 44444444
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+..+. ..+...++|||+++++|.+++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++.+..
T Consensus 70 ~~~~~---~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~- 143 (296)
T 3uzp_A 70 IRWCG---AEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKK- 143 (296)
T ss_dssp EEEEE---EETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGG-
T ss_pred ccccc---CCCCceEEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCC-
Confidence 43332 2456789999999999999887443 4589999999999999999999998 9999999999999952221
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchh
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSV 253 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aP 253 (393)
...++|+|||++...... .....||+.|+||
T Consensus 144 ---------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 3uzp_A 144 ---------------------------------------GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp ---------------------------------------TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCH
T ss_pred ---------------------------------------CCeEEEeeCCCcccccccccccccccccccccccccccCCh
Confidence 115999999998765432 2345789999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+..++.++||||||+++|+|++|+.||.......... .+..+....-..|...
T Consensus 185 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~-------------------- 241 (296)
T 3uzp_A 185 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ---KYERISEKKMSTPIEV-------------------- 241 (296)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS---HHHHHHHHHHHSCHHH--------------------
T ss_pred hhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh---hhhhhcccccCCchHH--------------------
Confidence 99999999999999999999999999999998655333221 1111211111111100
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+....+..+.++|.+||+.||.+|||++++++.
T Consensus 242 -----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 242 -----------------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp -----------------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred -----------------HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 113456788999999999999999999998763
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=307.05 Aligned_cols=247 Identities=19% Similarity=0.301 Sum_probs=201.1
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
-.++|++.+.||+|+||.||+|.+. ++..||+|+++......+.+.+|+.+++.+ .|+|++++++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 70 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKL--------------SHPKLVKFYG 70 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHC--------------CCTTBCCEEE
T ss_pred chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 3468999999999999999999776 566799999987766677889999999999 7899999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. .....++|||++ +++|.+++.... ..+++..+..++.|++.||++||++ |++||||||+||+++.++
T Consensus 71 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~--- 141 (268)
T 3sxs_A 71 VCS----KEYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDL--- 141 (268)
T ss_dssp EEC----SSSSEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTC---
T ss_pred EEc----cCCceEEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCC---
Confidence 886 566799999999 788988886643 3489999999999999999999998 999999999999997766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....+|+.|+|||.+.+..
T Consensus 142 ----------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 181 (268)
T 3sxs_A 142 ----------------------------------------CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK 181 (268)
T ss_dssp ----------------------------------------CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSE
T ss_pred ----------------------------------------CEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccC
Confidence 4999999998755332 22334567899999999988
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++||||||+++|+|++ |..||...+ .......+.. +.
T Consensus 182 ~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~--~~------------------------------- 222 (268)
T 3sxs_A 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYT------NSEVVLKVSQ--GH------------------------------- 222 (268)
T ss_dssp EETTHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHT--TC-------------------------------
T ss_pred CchhhhhHHHHHHHHHHHcCCCCCccccC------hHHHHHHHHc--CC-------------------------------
Confidence 9999999999999999999 999996544 2222111111 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.|++++
T Consensus 223 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 223 --------RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp --------CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred --------CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123345678899999999999999999999987
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-41 Score=316.87 Aligned_cols=281 Identities=16% Similarity=0.211 Sum_probs=201.3
Q ss_pred ccccCCee----CCeEEEEEEecccCceEEEEEEeCC---CCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCc-c
Q psy12288 19 PVQIGDLF----NFRYHVIRKLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS-S 90 (393)
Q Consensus 19 ~~~~~~~~----~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~-~ 90 (393)
|+..|..+ +++|++.+.||+|+||.||+|.+.. ++..||+|++.... ....+|+.+++.+.....+.. .
T Consensus 24 ~l~~g~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~ 100 (345)
T 2v62_A 24 PFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN---GPLFSELKFYQRVAKKDCIKKWI 100 (345)
T ss_dssp -CCTTCEEECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC----CHHHHHHHHHHHHCCHHHHHHHH
T ss_pred cCCCCCeeccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC---cchHHHHHHHHHHhhhHHHHHHH
Confidence 34455555 4699999999999999999999987 77889999887542 223344444444422111000 0
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
......|+|++++++.+..........++|||+++++|.+++.... .+++.++..++.|++.||+|||++ |++||||
T Consensus 101 ~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dl 177 (345)
T 2v62_A 101 ERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDI 177 (345)
T ss_dssp HHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred hhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCc
Confidence 0111279999999999886555678899999999999999886653 589999999999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---------- 240 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---------- 240 (393)
||+||+++.++. ..++|+|||+++.....
T Consensus 178 kp~NIll~~~~~-----------------------------------------~~~kL~Dfg~a~~~~~~~~~~~~~~~~ 216 (345)
T 2v62_A 178 KAANLLLGYKNP-----------------------------------------DQVYLADYGLSYRYCPNGNHKQYQENP 216 (345)
T ss_dssp SGGGEEEESSST-----------------------------------------TSEEECCCTTCEESSGGGCCCCCCCCG
T ss_pred CHHHEEEccCCC-----------------------------------------CcEEEEeCCCceecccccccccchhcc
Confidence 999999986651 14999999999765321
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..............+|......
T Consensus 217 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---- 288 (345)
T 2v62_A 217 RKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD----PVAVQTAKTNLLDELPQSVLKW---- 288 (345)
T ss_dssp GGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC----HHHHHHHHHHHHHTTTHHHHHH----
T ss_pred ccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc----cHHHHHHHHhhcccccHHHHhh----
Confidence 13447899999999999998999999999999999999999999643211 2222222233333344332210
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
. -....+..+.++|.+||..||.+|||++++++.
T Consensus 289 ----------------------------~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 322 (345)
T 2v62_A 289 ----------------------------A-PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI 322 (345)
T ss_dssp ----------------------------S-CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred ----------------------------c-cccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 0 012456789999999999999999999998764
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=316.82 Aligned_cols=250 Identities=18% Similarity=0.251 Sum_probs=199.1
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
++...++|++.+.||+|+||.||+|.+..+++ .||||+++.. ....+.+.+|+.+++.+ .|
T Consensus 44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h 109 (325)
T 3kul_A 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF--------------DH 109 (325)
T ss_dssp CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC--------------CC
T ss_pred cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC--------------CC
Confidence 34456799999999999999999999986655 4999998753 22345678899999988 79
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+||+++++.+. .+...++||||+ +++|.+++.... ..++..++..++.|++.||+|||++ |++||||||+||+
T Consensus 110 ~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIl 183 (325)
T 3kul_A 110 PNIIRLEGVVT----RGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVL 183 (325)
T ss_dssp TTBCCEEEEEC----GGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEE
T ss_pred CCCCcEEEEEE----eCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEE
Confidence 99999999886 566789999999 779888886543 4589999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCC
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQY 250 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y 250 (393)
++.++ .++|+|||++...... .....+|+.|
T Consensus 184 l~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y 220 (325)
T 3kul_A 184 VDSNL-------------------------------------------VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220 (325)
T ss_dssp ECTTC-------------------------------------------CEEECCCSSCEECC----CCEECC---CCGGG
T ss_pred ECCCC-------------------------------------------CEEECCCCcccccccCccceeeccCCCCcccc
Confidence 97766 4999999999865432 1223457789
Q ss_pred chhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 251 RSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 251 ~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
+|||++.+..++.++||||||+++|+|++ |..||.... .......+... .
T Consensus 221 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~------~~~~~~~~~~~-~---------------------- 271 (325)
T 3kul_A 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT------NRDVISSVEEG-Y---------------------- 271 (325)
T ss_dssp SCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC------HHHHHHHHHTT-C----------------------
T ss_pred cCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHcC-C----------------------
Confidence 99999999889999999999999999999 999996544 22222221110 0
Q ss_pred eeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 330 FRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.++|.+||..||.+|||+.|+++
T Consensus 272 ------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 272 ------------------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp ------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------------------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 01123455678899999999999999999999876
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=308.22 Aligned_cols=246 Identities=19% Similarity=0.295 Sum_probs=198.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|+||.||+|.+. ++..||+|++.......+.+.+|+.+++.+ .|+|++++++.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~~ 87 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------------SHEKLVQLYGV 87 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC--------------CCTTBCCEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcC--------------CCCCEeeEEEE
Confidence 468999999999999999999776 667899999987766677889999999998 78999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....++||||+ +++|.+++.... ..+++..+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 88 ~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~---- 157 (283)
T 3gen_A 88 CT----KQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQG---- 157 (283)
T ss_dssp EC----SSSSEEEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTS----
T ss_pred Ee----cCCCeEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCC----
Confidence 86 566799999999 789998886632 3489999999999999999999998 999999999999998666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.++|+|||++..... ......+|+.|+|||++.+..+
T Consensus 158 ---------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 198 (283)
T 3gen_A 158 ---------------------------------------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 198 (283)
T ss_dssp ---------------------------------------CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCC
T ss_pred ---------------------------------------CEEEccccccccccccccccccCCccCcccCCHHHhccCCC
Confidence 499999999875532 2334456788999999999999
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++||||||+++|+|++ |..||...+ .......+......
T Consensus 199 ~~~~Dv~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~~~~~~~-------------------------------- 240 (283)
T 3gen_A 199 SSKSDIWAFGVLMWEIYSLGKMPYERFT------NSETAEHIAQGLRL-------------------------------- 240 (283)
T ss_dssp SHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHTTCCC--------------------------------
T ss_pred CchhhHHHHHHHHHHHHhCCCCCccccC------hhHHHHHHhcccCC--------------------------------
Confidence 999999999999999998 999997544 22222222111000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+...+..+.++|.+||..||.+|||++|+++|
T Consensus 241 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 241 ---------YRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp ---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred ---------CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 1123345678899999999999999999999976
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=327.26 Aligned_cols=287 Identities=19% Similarity=0.290 Sum_probs=212.6
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++.++++|++.++||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++.+ .|+|
T Consensus 3 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpn 68 (396)
T 4eut_A 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--------------NHKN 68 (396)
T ss_dssp EEECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC--------------CCTT
T ss_pred CCCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc--------------CCCC
Confidence 35667889999999999999999999999999999999987543 2245667899999999 7999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEE
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILM 177 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~ 177 (393)
++++++.+.. ......++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ |++||||||+||++
T Consensus 69 Iv~~~~~~~~--~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll 145 (396)
T 4eut_A 69 IVKLFAIEEE--TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMR 145 (396)
T ss_dssp BCCEEEEEEC--TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEE
T ss_pred CCeEEEeecc--CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEE
Confidence 9999988762 2345789999999 789988886543 22389999999999999999999998 99999999999998
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEV 255 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~ 255 (393)
..+.. ....+||+|||++..... ......||+.|+|||+
T Consensus 146 ~~~~~---------------------------------------~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~ 186 (396)
T 4eut_A 146 VIGED---------------------------------------GQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186 (396)
T ss_dssp EECTT---------------------------------------SCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHH
T ss_pred eecCC---------------------------------------CceeEEEecCCCceEccCCCccccccCCccccCHHH
Confidence 33221 012599999999976543 2345678999999999
Q ss_pred Hhc--------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 256 LIG--------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 256 ~~~--------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
+.+ ..++.++|||||||++|+|++|+.||.+...... .... +....+..|...+....... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~---~~~~~~~~p~~~~~~~~~~~-----~ 256 (396)
T 4eut_A 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEV---MYKIITGKPSGAISGVQKAE-----N 256 (396)
T ss_dssp HHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHH---HHHHHHSCCTTCCEEEECST-----T
T ss_pred hhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHH---HHHHhcCCCcccchhheecc-----C
Confidence 875 4567899999999999999999999976543221 2222 33333333332221111100 0
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+..... ...+....++...+..+.++|++||..||++||+++|++++
T Consensus 257 ~~~~~~---------~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 257 GPIDWS---------GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp CCEEEE---------SSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred CCcccC---------ccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 000000 01112234557788999999999999999999999998653
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=315.71 Aligned_cols=265 Identities=13% Similarity=0.130 Sum_probs=201.0
Q ss_pred ccccCCee----CCeEEEEEEecccCceEEEEEEeCCC--------CceEEEEEEecccccchhhHHHHHHHHHhcccCC
Q psy12288 19 PVQIGDLF----NFRYHVIRKLGWGHFSTVWLSWDLQD--------KTFVALKIVKSDQVYADTARDEIVLLKAVGRKSN 86 (393)
Q Consensus 19 ~~~~~~~~----~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~ 86 (393)
++..|+.+ +++|++.+.||+|+||.||+|.+..+ ++.||+|++... +.+.+|+.+++.+
T Consensus 29 ~l~~g~~i~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l----- 99 (352)
T 2jii_A 29 ALPTGTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA----- 99 (352)
T ss_dssp CCCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-----
T ss_pred hCCCCceeecccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-----
Confidence 46677777 57999999999999999999999884 789999998754 5788999999999
Q ss_pred CCcccccCccccccee---------------ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHH
Q psy12288 87 VHSSAYNTQASEKVIR---------------LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQ 151 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~---------------~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~q 151 (393)
.|+|+++ +++.+. ..+...++||||++++|.+++.......+++.++..++.|
T Consensus 100 ---------~h~niv~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~q 167 (352)
T 2jii_A 100 ---------AKPLQVNKWKKLYSTPLLAIPTCMGFGV---HQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACR 167 (352)
T ss_dssp ---------CCHHHHHHHHHHTTCTTCSCCCCCEEEE---ETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHH
T ss_pred ---------cccchhhhhhhhccCCccCccchhhccc---cCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHH
Confidence 5566555 333332 1357899999999999999998753355999999999999
Q ss_pred HHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeec
Q psy12288 152 VLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADL 231 (393)
Q Consensus 152 l~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~df 231 (393)
++.||+|||++ |++||||||+||+++.++. ..++|+||
T Consensus 168 i~~~L~~LH~~-~ivH~Dikp~NIl~~~~~~-----------------------------------------~~~kl~Df 205 (352)
T 2jii_A 168 LLDALEFLHEN-EYVHGNVTAENIFVDPEDQ-----------------------------------------SQVTLAGY 205 (352)
T ss_dssp HHHHHHHHHHT-TCBCSCCCGGGEEEETTEE-----------------------------------------EEEEECCG
T ss_pred HHHHHHHHHhC-CccCCCCCHHHEEEcCCCC-----------------------------------------ceEEEecC
Confidence 99999999998 9999999999999986651 14999999
Q ss_pred CccccccCC----------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHH
Q psy12288 232 GNACWIDDH----------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAH 301 (393)
Q Consensus 232 g~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 301 (393)
|++...... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... .......
T Consensus 206 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~~~ 281 (352)
T 2jii_A 206 GFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN----TEDIMKQ 281 (352)
T ss_dssp GGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC----HHHHHHH
T ss_pred cceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC----HHHHHHH
Confidence 999765321 13347899999999999988999999999999999999999999754321 1111111
Q ss_pred HHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh
Q psy12288 302 IVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381 (393)
Q Consensus 302 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 381 (393)
........+... . ........+..+.+||.+||..||.+|||+++++
T Consensus 282 ~~~~~~~~~~~~-----------~----------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 328 (352)
T 2jii_A 282 KQKFVDKPGPFV-----------G----------------------PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLR 328 (352)
T ss_dssp HHHHHHSCCCEE-----------C----------------------TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred HHhccCChhhhh-----------h----------------------hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHH
Confidence 111111111000 0 0000123457889999999999999999999987
Q ss_pred cC
Q psy12288 382 RH 383 (393)
Q Consensus 382 ~h 383 (393)
+.
T Consensus 329 ~~ 330 (352)
T 2jii_A 329 NN 330 (352)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=314.60 Aligned_cols=270 Identities=19% Similarity=0.223 Sum_probs=198.5
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.++||+|+||.||+|.+. ++.||||++............|+.+++.+ .|+||+++++.
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~~~~~ 86 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGM--------------KHENILQFIGA 86 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTC--------------CCTTBCCEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcC--------------CCCCchhhcce
Confidence 369999999999999999999875 78999999976554444555677767666 79999999999
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC---------CeeeccCCCCceE
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC---------RIIHTDIKPENIL 176 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~---------~i~H~dlkp~NIl 176 (393)
+.........+++||||+ +++|.+++... .+++..+..++.|++.||+|||+.+ |++||||||+||+
T Consensus 87 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nil 163 (322)
T 3soc_A 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL 163 (322)
T ss_dssp EEEECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEE
T ss_pred eccCCCCCceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEE
Confidence 986655567799999999 77999988764 3899999999999999999999742 8999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~ 251 (393)
++.++ .+||+|||++...... .....||+.|+
T Consensus 164 l~~~~-------------------------------------------~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~ 200 (322)
T 3soc_A 164 LKNNL-------------------------------------------TACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200 (322)
T ss_dssp ECTTC-------------------------------------------CEEECCCTTCEEECTTSCCCCCTTCCCCGGGC
T ss_pred ECCCC-------------------------------------------eEEEccCCcccccccccCccccccCccCcccc
Confidence 97665 4999999999765322 22357899999
Q ss_pred hhHHHhcC-----CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 252 SVEVLIGA-----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 252 aPE~~~~~-----~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
|||++.+. .++.++|||||||++|+|++|+.||.+........... ..................
T Consensus 201 aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~----- 269 (322)
T 3soc_A 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE------EIGQHPSLEDMQEVVVHK----- 269 (322)
T ss_dssp CHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH------HHCSSCCHHHHHHHHTTS-----
T ss_pred CHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh------hhccCCchhhhhhhhhcc-----
Confidence 99999874 34668899999999999999999998665433211110 000111111000000000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....... . ..-....+..+.+||++||..||++|||+.|+++.
T Consensus 270 -~~~~~~~------------~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 270 -KKRPVLR------------D-YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp -CCCCCCC------------G-GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -cCCCCcc------------c-cccccchHHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0000000 0 00013456779999999999999999999999863
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=315.37 Aligned_cols=261 Identities=19% Similarity=0.252 Sum_probs=185.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
...++|++.+.||+|+||.||+|.+..++. .||+|+++.. ....+.+.+|+.+++.+ .|+
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~ 85 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF--------------DHP 85 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC--------------CCT
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC--------------CCC
Confidence 345689999999999999999999887765 7999998753 22346678899999888 799
Q ss_pred cceeccccceeecCCC--eEEEEEEeec-cccHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 99 KVIRLLNDFKIYSRNG--THICMVFEVM-GYNLLRLIARSD----YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~--~~~~iv~e~~-~~~l~~~~~~~~----~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
|++++++.+......+ ...++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ |++|||||
T Consensus 86 ~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dik 164 (323)
T 3qup_A 86 HVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLA 164 (323)
T ss_dssp TBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCS
T ss_pred ceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCC
Confidence 9999999887322111 1248999999 779988885432 12488999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCC
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQ 246 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~ 246 (393)
|+||+++.++ .++|+|||++...... .....+
T Consensus 165 p~NIli~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 201 (323)
T 3qup_A 165 ARNCMLAEDM-------------------------------------------TVCVADFGLSRKIYSGDYYRQGCASKL 201 (323)
T ss_dssp GGGEEECTTS-------------------------------------------CEEECCCCC-----------------C
T ss_pred cceEEEcCCC-------------------------------------------CEEEeeccccccccccccccccccccC
Confidence 9999998766 4999999998765322 123345
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
|+.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+. ......+.. +.
T Consensus 202 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~~~~--~~----------------- 256 (323)
T 3qup_A 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN------AEIYNYLIG--GN----------------- 256 (323)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG------GGHHHHHHT--TC-----------------
T ss_pred cccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh------HHHHHHHhc--CC-----------------
Confidence 778999999999999999999999999999999 9999976542 222221111 00
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-------HHHHhcCCCCCCCC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-------AADCLRHPWLNPRR 390 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-------~~ell~hp~~~~~~ 390 (393)
....+...+..+.+||.+||..||++||| ++++++|||+....
T Consensus 257 ----------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 257 ----------------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306 (323)
T ss_dssp ----------------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred ----------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence 01123455678899999999999999999 78899999998654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=319.14 Aligned_cols=250 Identities=20% Similarity=0.297 Sum_probs=199.5
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCC-------CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
..++|++.+.||+|+||.||+|.+.. ++..||+|+++... ...+.+.+|+.+++.+. .
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~ 145 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-------------K 145 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSC-------------C
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhc-------------C
Confidence 45799999999999999999998752 45679999987542 22356788999999983 6
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
|+||+++++.+. ....+++||||+ +++|.+++.... ...++..++..++.||+.||+|||+
T Consensus 146 hpnIv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 221 (370)
T 2psq_A 146 HKNIINLLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221 (370)
T ss_dssp CTTBCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEeeEEEEEc----cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999999886 566789999999 779999887643 1347889999999999999999999
Q ss_pred cCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-
Q psy12288 162 QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH- 240 (393)
Q Consensus 162 ~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~- 240 (393)
+ |++||||||+|||++.++ .+||+|||++......
T Consensus 222 ~-~ivHrDlkp~NIll~~~~-------------------------------------------~~kl~DFG~a~~~~~~~ 257 (370)
T 2psq_A 222 Q-KCIHRDLAARNVLVTENN-------------------------------------------VMKIADFGLARDINNID 257 (370)
T ss_dssp T-TEECSCCCGGGEEECTTC-------------------------------------------CEEECCCSSCEETTCCC
T ss_pred C-CeeccccchhhEEECCCC-------------------------------------------CEEEccccCCcccCccc
Confidence 8 999999999999998766 4999999999765432
Q ss_pred ----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHh
Q psy12288 241 ----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315 (393)
Q Consensus 241 ----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 315 (393)
.....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+... ......+.. +.
T Consensus 258 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~------~~~~~~~~~--~~------- 322 (370)
T 2psq_A 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EELFKLLKE--GH------- 322 (370)
T ss_dssp TTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHHHHT--TC-------
T ss_pred ceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhc--CC-------
Confidence 223456788999999999999999999999999999999 9999976442 111111110 00
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+..++..+.++|.+||..||.+|||+.|++++
T Consensus 323 --------------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 323 --------------------------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp --------------------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --------------------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011234556788999999999999999999999875
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=317.75 Aligned_cols=252 Identities=19% Similarity=0.254 Sum_probs=200.3
Q ss_pred eCCeEEEEEEecccCceEEEEEE-----eCCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSW-----DLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
..++|++.+.||+|+||.||+|. +..+++.||||+++.... ..+.+.+|+.+++.+. .|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~hp 86 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-------------HHL 86 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-------------CCT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhc-------------CCc
Confidence 35799999999999999999998 556678999999975432 2356789999999993 679
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC----------------------------------------
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY---------------------------------------- 137 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---------------------------------------- 137 (393)
||+++++.+.. .+...++||||+ +++|.+++.....
T Consensus 87 niv~~~~~~~~---~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (359)
T 3vhe_A 87 NVVNLLGACTK---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSA 163 (359)
T ss_dssp TBCCEEEEECS---TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------
T ss_pred ceeeeeeeeec---CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccc
Confidence 99999988762 345589999999 7899998876432
Q ss_pred ------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhc
Q psy12288 138 ------------------------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATK 193 (393)
Q Consensus 138 ------------------------~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~ 193 (393)
..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~------------ 230 (359)
T 3vhe_A 164 SSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKN------------ 230 (359)
T ss_dssp --------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGG------------
T ss_pred ccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCC------------
Confidence 1288899999999999999999998 999999999999998766
Q ss_pred ccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHH
Q psy12288 194 HHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIW 268 (393)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Diw 268 (393)
.++|+|||++...... .....+|+.|+|||++.+..++.++|||
T Consensus 231 -------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~ 279 (359)
T 3vhe_A 231 -------------------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 279 (359)
T ss_dssp -------------------------------CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred -------------------------------cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhh
Confidence 4999999998765322 2234568899999999999999999999
Q ss_pred hHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhh
Q psy12288 269 STACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTE 347 (393)
Q Consensus 269 SlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (393)
|||+++|+|++ |..||.+.... ..+........
T Consensus 280 slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~~---------------------------------------- 313 (359)
T 3vhe_A 280 SFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGT---------------------------------------- 313 (359)
T ss_dssp HHHHHHHHHTTTSCCSSTTCCCS------HHHHHHHHHTC----------------------------------------
T ss_pred hHHHHHHHHHhcCCCCCCccchh------HHHHHHHHcCC----------------------------------------
Confidence 99999999998 99999765421 22222211111
Q ss_pred hccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 348 KYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 348 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.|+++|
T Consensus 314 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 111234456788999999999999999999999987
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=304.99 Aligned_cols=253 Identities=19% Similarity=0.261 Sum_probs=206.3
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++..++.+|++.+.||+|+||.||+|.+..+++.||+|.+... .+.+.+|+.+++.+ .|+|+
T Consensus 4 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~e~~~l~~l--------------~h~~i 66 (284)
T 2a19_B 4 TVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKL--------------DHVNI 66 (284)
T ss_dssp CCCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC---SGGGHHHHHHHHHC--------------CCTTB
T ss_pred cccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc---cHHHHHHHHHHHhC--------------CCCCE
Confidence 35667788999999999999999999999999999999998754 35778999999999 78999
Q ss_pred eeccccceeec------------CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 101 IRLLNDFKIYS------------RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 101 ~~~~~~~~~~~------------~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
+++++.+.... ......++||||+ +++|.+++.......+++..+..++.|++.||+|||++ |++|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H 145 (284)
T 2a19_B 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLIN 145 (284)
T ss_dssp CCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEEC
T ss_pred EEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-Ceee
Confidence 99988875421 1245689999999 56999998765445689999999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~ 245 (393)
+||||+||+++.++ .++|+|||++...... .....
T Consensus 146 ~dlkp~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~ 182 (284)
T 2a19_B 146 RDLKPSNIFLVDTK-------------------------------------------QVKIGDFGLVTSLKNDGKRTRSK 182 (284)
T ss_dssp SCCSGGGEEEEETT-------------------------------------------EEEECCCTTCEESSCCSCCCCCC
T ss_pred ccCCHHHEEEcCCC-------------------------------------------CEEECcchhheeccccccccccC
Confidence 99999999998776 5999999998765432 34456
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+|+.|+|||++.+..++.++||||||+++|+|++|..||... ... ......
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---------~~~--~~~~~~------------------ 233 (284)
T 2a19_B 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---------SKF--FTDLRD------------------ 233 (284)
T ss_dssp SCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---------HHH--HHHHHT------------------
T ss_pred CcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---------HHH--HHHhhc------------------
Confidence 899999999999998999999999999999999998877310 000 000000
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..++...+..+.++|.+||..||.+|||+.|+++|.+.
T Consensus 234 -----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~ 271 (284)
T 2a19_B 234 -----------------------GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271 (284)
T ss_dssp -----------------------TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00123345678899999999999999999999998654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=317.03 Aligned_cols=253 Identities=22% Similarity=0.292 Sum_probs=201.9
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCC-------CceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQD-------KTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
.+...++|++.++||+|+||.||+|.+..+ +..||+|+++.... ....+.+|+.+++.+.
T Consensus 64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----------- 132 (382)
T 3tt0_A 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG----------- 132 (382)
T ss_dssp TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----------
T ss_pred cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhc-----------
Confidence 345568999999999999999999997543 35799999875432 2356788999999983
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHH
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--------------KGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~l~~~~~~~i~~ql~~~l~~ 158 (393)
.|+||+++++.+. .....++||||+ +++|.+++..... ..+++..+..++.|++.||+|
T Consensus 133 --~hpnIv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 206 (382)
T 3tt0_A 133 --KHKNIINLLGACT----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206 (382)
T ss_dssp --CCTTBCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred --CCchhhhheeeec----cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 6899999999887 566789999999 7799999876532 348999999999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||++ |++||||||+||+++.++ .+||+|||++....
T Consensus 207 LH~~-~ivH~Dlkp~NIll~~~~-------------------------------------------~~kL~DFG~a~~~~ 242 (382)
T 3tt0_A 207 LASK-KCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARDIH 242 (382)
T ss_dssp HHHT-TCCCSCCCGGGEEECTTC-------------------------------------------CEEECSCSCCCCSS
T ss_pred HHhC-CEecCCCCcceEEEcCCC-------------------------------------------cEEEcccCcccccc
Confidence 9998 999999999999998766 49999999998654
Q ss_pred CC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 239 DH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 239 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
.. .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.... .......+.. +.
T Consensus 243 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------~~~~~~~~~~--~~---- 310 (382)
T 3tt0_A 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLKE--GH---- 310 (382)
T ss_dssp CCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHT--TC----
T ss_pred cccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC----
Confidence 32 233456788999999999999999999999999999999 999997544 1111111111 00
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+||++||..||++|||++|++++
T Consensus 311 -----------------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 311 -----------------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp -----------------------------------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----------------------------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011223456788999999999999999999999875
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-41 Score=308.84 Aligned_cols=268 Identities=18% Similarity=0.236 Sum_probs=200.2
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEE----eCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.++...++|++.++||+|+||.||+|+ +..+++.||+|++.... ...+.+.+|+.+++.+ .
T Consensus 4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--------------~ 69 (295)
T 3ugc_A 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------------Q 69 (295)
T ss_dssp --CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC--------------C
T ss_pred cCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC--------------C
Confidence 355667899999999999999999998 56789999999987542 2345678999999998 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+... ....+++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++||||||+||
T Consensus 70 h~~iv~~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Ni 145 (295)
T 3ugc_A 70 HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNI 145 (295)
T ss_dssp CTTBCCEEEEECHH--HHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGE
T ss_pred CCCEeeEEEEEecC--CCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhE
Confidence 89999998877522 234588999999 779999887643 3488999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQ 249 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~ 249 (393)
+++.++ .++|+|||++...... .....++..
T Consensus 146 l~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
T 3ugc_A 146 LVENEN-------------------------------------------RVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182 (295)
T ss_dssp EEEETT-------------------------------------------EEEECCCCSCC-------------CTTCGGG
T ss_pred EEcCCC-------------------------------------------eEEEccCcccccccCCcceeeeccCCCCccc
Confidence 998876 5999999998765422 223346677
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|+|||++.+..++.++||||||+++|+|++|..||.... .......+..+......
T Consensus 183 y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~------------- 238 (295)
T 3ugc_A 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP-----------AEFMRMIGNDKQGQMIV------------- 238 (295)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH-----------HHHHHHHCTTCCTHHHH-------------
T ss_pred eeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh-----------HHHHhhhcCccccchhH-------------
Confidence 999999999999999999999999999999999885321 11111111111100000
Q ss_pred eeeccCCCcchhHHHH--hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 330 FRRIDNLKPWGLYQVL--TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....... ....+.+...+..+.++|.+||..||++|||++|+++.
T Consensus 239 ---------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~ 285 (295)
T 3ugc_A 239 ---------FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 285 (295)
T ss_dssp ---------HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ---------HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0000000 01122345667889999999999999999999999863
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=320.60 Aligned_cols=273 Identities=23% Similarity=0.330 Sum_probs=198.2
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
..+.+++.|.+.+.||+|+||.||.+ ...+++.||||++.... .+.+.+|+.+++.+. .|+||+
T Consensus 9 ~~~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~-------------~HpnIv 72 (434)
T 2rio_A 9 FEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF--CDIALMEIKLLTESD-------------DHPNVI 72 (434)
T ss_dssp CSCSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHT-------------TSTTBC
T ss_pred hhhhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH--HHHHHHHHHHHHhcc-------------CCCCcC
Confidence 45567778999999999999999876 45578999999987542 356788999998762 799999
Q ss_pred eccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG-----IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~-----l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
++++.+. .+...++|||+++++|.+++....... .++..+..++.||+.||+|||++ ||+||||||+|||
T Consensus 73 ~~~~~~~----~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NIL 147 (434)
T 2rio_A 73 RYYCSET----TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNIL 147 (434)
T ss_dssp CEEEEEE----CSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEE
T ss_pred eEEEEEe----cCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEE
Confidence 9988876 677899999999889999987643211 12334578999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCC
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQ 249 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~ 249 (393)
++.++.... ..........++|+|||++...... .....||+.
T Consensus 148 l~~~~~~~~------------------------------~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~ 197 (434)
T 2rio_A 148 VSTSSRFTA------------------------------DQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSG 197 (434)
T ss_dssp EECCHHHHS------------------------------CCTTCCCSCEEEECCCTTCEECCC--------------CCT
T ss_pred EecCccccc------------------------------ccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCC
Confidence 987652100 0000111236999999999865432 123478999
Q ss_pred CchhHHHhc-------CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 250 YRSVEVLIG-------AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 250 y~aPE~~~~-------~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
|+|||++.+ ..++.++|||||||++|+|++ |..||..... .. ..+....-..+.
T Consensus 198 y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~--~~i~~~~~~~~~---------- 259 (434)
T 2rio_A 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS------RE--SNIIRGIFSLDE---------- 259 (434)
T ss_dssp TSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT------HH--HHHHHTCCCCCC----------
T ss_pred ccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh------hH--HHHhcCCCCccc----------
Confidence 999999976 568999999999999999999 9999964331 10 111110000000
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
. ........+..+.+||.+||..||.+|||+.|+++||||.+
T Consensus 260 --------------~-----------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 260 --------------M-----------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp --------------C-----------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred --------------c-----------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 0 00012456788999999999999999999999999999975
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=322.26 Aligned_cols=257 Identities=23% Similarity=0.280 Sum_probs=194.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.+|++.++||+|+||.||.. ...+++.||||++.... .....+|+.+++.+. .|+||+++++.+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~-------------~HpnIv~l~~~~ 87 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPEC--FSFADREVQLLRESD-------------EHPNVIRYFCTE 87 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTT--EEECHHHHHHHHHSC-------------CCTTBCCEEEEE
T ss_pred EEEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHH--HHHHHHHHHHHHhcc-------------CCCCcCeEEEEE
Confidence 48999999999999986643 45678999999987532 345788999999873 699999999887
Q ss_pred eeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 108 KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
. .....++|||+++++|.+++.... ..+....+..++.||+.||+|||++ ||+||||||+||+++.++.
T Consensus 88 ~----~~~~~~lv~E~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~----- 156 (432)
T 3p23_A 88 K----DRQFQYIAIELCAATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNA----- 156 (432)
T ss_dssp E----ETTEEEEEEECCSEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBT-----
T ss_pred e----cCCEEEEEEECCCCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCC-----
Confidence 6 567799999999999999987654 2355566788999999999999998 9999999999999964331
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------CCCCCCCCCCCchhHHHhc---
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSVEVLIG--- 258 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~t~~y~aPE~~~~--- 258 (393)
.....++|+|||++..... ......||+.|+|||++.+
T Consensus 157 ---------------------------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~ 203 (432)
T 3p23_A 157 ---------------------------------HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCK 203 (432)
T ss_dssp ---------------------------------TTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC--
T ss_pred ---------------------------------CCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccc
Confidence 0022588999999876542 2234568999999999974
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++|||||||++|+|++ |..||..... .. .....+..+..
T Consensus 204 ~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~---~~~~~~~~~~~------------------------- 248 (432)
T 3p23_A 204 ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQ---ANILLGACSLD------------------------- 248 (432)
T ss_dssp -CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HH---HHHHTTCCCCT-------------------------
T ss_pred cCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HH---HHHHhccCCcc-------------------------
Confidence 457889999999999999999 9999953221 11 11111111000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
........+..+.+||.+||+.||.+|||++|+++||||.+.
T Consensus 249 ----------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 249 ----------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp ----------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred ----------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 000113456678899999999999999999999999999763
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=329.12 Aligned_cols=248 Identities=18% Similarity=0.238 Sum_probs=205.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.++||+|+||.||+|.+..++..||||+++......+.+.+|+.+++.+ .|+||+++++.
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~l~~~ 284 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------------KHPNLVQLLGV 284 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc--------------CCCCEeeEEEE
Confidence 4689999999999999999999998899999999987666678889999999999 89999999998
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. .....++||||+ +++|.+++.......++...+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 285 ~~----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~---- 355 (495)
T 1opk_A 285 CT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENH---- 355 (495)
T ss_dssp EC----SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGG----
T ss_pred Ee----cCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCC----
Confidence 86 556789999999 78999999876555689999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||+++..... .....++..|+|||++.+..+
T Consensus 356 ---------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 396 (495)
T 1opk_A 356 ---------------------------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 396 (495)
T ss_dssp ---------------------------------------CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEE
T ss_pred ---------------------------------------cEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCC
Confidence 4999999998865322 223345678999999999889
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|||||||++|+|++ |..||.+.+.. .....+.. +.
T Consensus 397 ~~~sDvwSlG~~l~el~t~g~~p~~~~~~~------~~~~~~~~--~~-------------------------------- 436 (495)
T 1opk_A 397 SIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEK--DY-------------------------------- 436 (495)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------GHHHHHHT--TC--------------------------------
T ss_pred CcHHhHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHc--CC--------------------------------
Confidence 999999999999999999 99999765421 11111110 00
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+..++..+.+||.+||..||.+|||+.++++.
T Consensus 437 -------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 437 -------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 011234566788999999999999999999999864
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=314.18 Aligned_cols=274 Identities=18% Similarity=0.221 Sum_probs=203.5
Q ss_pred CCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCccc
Q psy12288 12 YRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSA 91 (393)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~ 91 (393)
+.++...|...+..+.++|++.+.||+|+||.||+|.+. ++.||||++.... ......|.+++....
T Consensus 21 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~e~~~~~~~~--------- 87 (337)
T 3mdy_A 21 SGSGSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE--EASWFRETEIYQTVL--------- 87 (337)
T ss_dssp HCSCSSSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG--HHHHHHHHHHHTSTT---------
T ss_pred CCCCCCCCcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc--cchhhhHHHHHHHHh---------
Confidence 456777888889999999999999999999999999875 8899999987543 233444544444331
Q ss_pred ccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------
Q psy12288 92 YNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC------- 163 (393)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~------- 163 (393)
..|+|++++++.+..........++||||+ +++|.+++... .+++..+..++.|++.||+|||+++
T Consensus 88 ---~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~ 161 (337)
T 3mdy_A 88 ---MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161 (337)
T ss_dssp ---CCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC
T ss_pred ---hcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 279999999998875433347899999999 77999998664 4899999999999999999999742
Q ss_pred CeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---
Q psy12288 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--- 240 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--- 240 (393)
|++||||||+||+++.++ .+||+|||++......
T Consensus 162 ~ivH~Dikp~Nill~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~ 198 (337)
T 3mdy_A 162 AIAHRDLKSKNILVKKNG-------------------------------------------TCCIADLGLAVKFISDTNE 198 (337)
T ss_dssp CEECSCCCGGGEEECTTS-------------------------------------------CEEECCCTTCEECC-----
T ss_pred CEEecccchHHEEECCCC-------------------------------------------CEEEEeCCCceeecccccc
Confidence 899999999999998766 4999999998765322
Q ss_pred ----CCCCCCCCCCchhHHHhcCCCCch------hhHHhHHHHHHHHHhC----------CCCCCCCCCCCCCCcHHHHH
Q psy12288 241 ----FADEIQTRQYRSVEVLIGAGYGPA------ADIWSTACMAFELATG----------DYLFDPKAGKEYSRDDDHLA 300 (393)
Q Consensus 241 ----~~~~~~t~~y~aPE~~~~~~~~~~------~DiwSlG~~l~ell~g----------~~pf~~~~~~~~~~~~~~~~ 300 (393)
.....||+.|+|||++.+...... +|||||||++|+|++| ..||........ ......
T Consensus 199 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--~~~~~~ 276 (337)
T 3mdy_A 199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP--SYEDMR 276 (337)
T ss_dssp ----CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHH
T ss_pred ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC--chhhhH
Confidence 124578999999999988765554 9999999999999999 556644332211 111111
Q ss_pred HHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHH
Q psy12288 301 HIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380 (393)
Q Consensus 301 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 380 (393)
.........+. .+ ....+..++..+.+||.+||..||.+|||+.|+
T Consensus 277 ~~~~~~~~~~~-------------------------~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 322 (337)
T 3mdy_A 277 EIVCIKKLRPS-------------------------FP---------NRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322 (337)
T ss_dssp HHHTTSCCCCC-------------------------CC---------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHhhhccCcc-------------------------cc---------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence 11111110000 00 000013677889999999999999999999999
Q ss_pred hcC
Q psy12288 381 LRH 383 (393)
Q Consensus 381 l~h 383 (393)
++|
T Consensus 323 l~~ 325 (337)
T 3mdy_A 323 KKT 325 (337)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=322.56 Aligned_cols=245 Identities=18% Similarity=0.238 Sum_probs=199.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.++||+|+||.||+|.+. ++.||||+++... ..+.+.+|+.+++.+ .|+|++++++.
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l--------------~h~niv~~~~~ 254 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQL--------------RHSNLVQLLGV 254 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTC--------------CCTTBCCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhc--------------cCCCEEEEEEE
Confidence 468999999999999999999875 7799999998654 567789999999998 89999999988
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+.. .....++||||+ +++|.+++.......++...+..++.|++.||+|||++ +++||||||+|||++.++
T Consensus 255 ~~~---~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~---- 326 (450)
T 1k9a_A 255 IVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDN---- 326 (450)
T ss_dssp EEC---TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTS----
T ss_pred EEc---CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCC----
Confidence 652 334689999999 77999999876544578999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.+||+|||+++..........++..|+|||++.+..++.++
T Consensus 327 ---------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~s 367 (450)
T 1k9a_A 327 ---------------------------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 367 (450)
T ss_dssp ---------------------------------------CEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHH
T ss_pred ---------------------------------------CEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHH
Confidence 49999999998655444445678899999999999999999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
||||||+++|+|++ |..||...+..+ ....+.. |.
T Consensus 368 DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~--~~------------------------------------ 403 (450)
T 1k9a_A 368 DVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEK--GY------------------------------------ 403 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTSCTTT------HHHHHHT--TC------------------------------------
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHc--CC------------------------------------
Confidence 99999999999998 999997655321 1111111 10
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+..++..+.++|.+||..||.+|||+.++++
T Consensus 404 ---~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 404 ---KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 11123456778999999999999999999999875
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=306.76 Aligned_cols=250 Identities=21% Similarity=0.380 Sum_probs=193.2
Q ss_pred cccccCCeeCCeEEEE-EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 18 CPVQIGDLFNFRYHVI-RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 18 ~~~~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.++..|+.++ +|.+. +.||+|+||.||+|.+..+++.||+|++.. .....+|+.++..+. .
T Consensus 8 ~~~~~~~~~~-~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~-------------~ 69 (299)
T 3m2w_A 8 LQIKKNAIID-DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRAS-------------Q 69 (299)
T ss_dssp CCCBCSCGGG-TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHT-------------T
T ss_pred ccCccccccc-chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhc-------------c
Confidence 4456666666 45555 889999999999999999999999999874 356778998885552 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+..........++||||+ +++|.+.+.......+++..+..++.|++.||+|||++ |++||||||+||
T Consensus 70 h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Ni 148 (299)
T 3m2w_A 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENL 148 (299)
T ss_dssp STTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGE
T ss_pred CCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHE
Confidence 8999999999986555678899999999 67999999876555699999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHH
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEV 255 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~ 255 (393)
+++.+.. ...++|+|||++.....
T Consensus 149 l~~~~~~----------------------------------------~~~~kl~Dfg~a~~~~~---------------- 172 (299)
T 3m2w_A 149 LYTSKRP----------------------------------------NAILKLTDFGFAKETTG---------------- 172 (299)
T ss_dssp EESSSST----------------------------------------TCCEEECCCTTCEECTT----------------
T ss_pred EEecCCC----------------------------------------CCcEEEecccccccccc----------------
Confidence 9976321 11599999998864321
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
..++.++|||||||++|+|++|..||.......... ......
T Consensus 173 ---~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~---------------------~~~~~~-------------- 214 (299)
T 3m2w_A 173 ---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP---------------------GMKTRI-------------- 214 (299)
T ss_dssp ---CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C---------------------CSCCSS--------------
T ss_pred ---ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH---------------------HHHHHH--------------
Confidence 346789999999999999999999997544221000 000000
Q ss_pred CCcchhHHHHhhhccCC----hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWS----KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
......++ ...+..+.+||.+||..||.+|||+.|+++||||++.
T Consensus 215 ---------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 215 ---------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263 (299)
T ss_dssp ---------CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred ---------hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence 00000011 2356788999999999999999999999999999764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=299.58 Aligned_cols=245 Identities=19% Similarity=0.322 Sum_probs=200.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+.+++.+ .|+|++++++.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~~~~~~~ 72 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------------SHPKLVQLYGVC 72 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTC--------------CCTTBCCEEEEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhC--------------CCCCEeeEEEEE
Confidence 58999999999999999999886 567899999987666667889999999998 789999999888
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .....++|||++ +++|.+++.... ..++...+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 73 ~----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~----- 141 (267)
T 3t9t_A 73 L----EQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQ----- 141 (267)
T ss_dssp C----SSSSCEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGG-----
T ss_pred c----cCCCeEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCC-----
Confidence 6 556789999999 678988886643 4588999999999999999999998 999999999999997766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.++|+|||++..... ......+|..|+|||++.+..++
T Consensus 142 --------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 183 (267)
T 3t9t_A 142 --------------------------------------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183 (267)
T ss_dssp --------------------------------------CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCC
T ss_pred --------------------------------------CEEEcccccccccccccccccccccccccccChhhhcCCCcc
Confidence 499999999876532 22344567889999999998899
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++||||||+++|+|++ |..||...+ .......+.. +.
T Consensus 184 ~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~i~~--~~--------------------------------- 222 (267)
T 3t9t_A 184 SKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDIST--GF--------------------------------- 222 (267)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHT--TC---------------------------------
T ss_pred chhchhhhHHHHHHHhccCCCCCCCCC------HHHHHHHHhc--CC---------------------------------
Confidence 99999999999999999 899997543 2222221111 00
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||++|||+++++++
T Consensus 223 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 223 ------RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ------cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 001123345678899999999999999999999875
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=309.08 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=182.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc--hh-hHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA--DT-ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~-~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|.+..+++.||||++....... .. +.++..+++.+ .|+|+++++
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~--------------~h~~i~~~~ 90 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH--------------DCPYIVQCF 90 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT--------------TCTTBCCEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc--------------CCCceeeEE
Confidence 58999999999999999999999999999999987543221 12 22233344444 799999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....++|||++++.+..+..... ..+++..+..++.|++.||+|||++.|++|+||||+||+++.++
T Consensus 91 ~~~~----~~~~~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~--- 162 (318)
T 2dyl_A 91 GTFI----TNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--- 162 (318)
T ss_dssp EEEE----CSSEEEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS---
T ss_pred EEEe----cCCcEEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC---
Confidence 9887 567899999999776666655432 45899999999999999999999832999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHh-----
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLI----- 257 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~----- 257 (393)
.++|+|||++...... .....+|+.|+|||++.
T Consensus 163 ----------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 202 (318)
T 2dyl_A 163 ----------------------------------------QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPT 202 (318)
T ss_dssp ----------------------------------------CEEECCCTTC--------------CCTTCCHHHHC-----
T ss_pred ----------------------------------------CEEEEECCCchhccCCccccccCCCccccChhhccccccc
Confidence 4999999998755332 33456899999999995
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
...++.++||||||+++|+|++|+.||..... ....+..+.. +..+.
T Consensus 203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~--~~~~~-------------------------- 249 (318)
T 2dyl_A 203 KPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQ--EEPPL-------------------------- 249 (318)
T ss_dssp ---CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHH--SCCCC--------------------------
T ss_pred ccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhc--cCCCC--------------------------
Confidence 45678999999999999999999999965331 1222222221 11000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.+.....+..+.++|.+||..||.+|||++|+++||||++
T Consensus 250 -----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 250 -----------LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp -----------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred -----------CCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence 0001234567889999999999999999999999999974
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=300.89 Aligned_cols=252 Identities=22% Similarity=0.305 Sum_probs=187.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.++|++.+.||+|+||.||+|.+. ++.||+|++.... ...+.+.+|+.+++.+ .|+|++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i~ 69 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML--------------KHPNII 69 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc--------------CCCCEe
Confidence 358999999999999999999874 8889999886432 2235678899999998 799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC---eeeccCCCCceEE
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR---IIHTDIKPENILM 177 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~---i~H~dlkp~NIl~ 177 (393)
++++.+. .+...++||||+ +++|.+.+.. ..+++..+..++.|++.||+|||++ | ++||||||+||++
T Consensus 70 ~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~ 141 (271)
T 3dtc_A 70 ALRGVCL----KEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILI 141 (271)
T ss_dssp CEEEEEC----CC--CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEE
T ss_pred eEEEEEe----cCCceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEE
Confidence 9999887 566789999999 7788777643 3589999999999999999999998 8 8999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHH
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVL 256 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~ 256 (393)
+.+... .......++|+|||++...... .....+|+.|+|||.+
T Consensus 142 ~~~~~~-----------------------------------~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~ 186 (271)
T 3dtc_A 142 LQKVEN-----------------------------------GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186 (271)
T ss_dssp SSCCSS-----------------------------------SCCSSCCEEECCCCC-------------CCGGGSCHHHH
T ss_pred eccccc-----------------------------------ccccCcceEEccCCcccccccccccCCCCccceeCHHHh
Confidence 753210 0001225999999998765432 3345789999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++||||||+++|+|++|+.||.+.+ .......+.. +.
T Consensus 187 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~--~~---------------------------- 230 (271)
T 3dtc_A 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRGID------GLAVAYGVAM--NK---------------------------- 230 (271)
T ss_dssp HHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC------HHHHHHHHHT--SC----------------------------
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHhhhc--CC----------------------------
Confidence 99999999999999999999999999997543 1111111100 00
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.++|.+||..||.+|||+.|++++
T Consensus 231 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 231 ----------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 0011234556788999999999999999999999875
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-42 Score=342.70 Aligned_cols=295 Identities=24% Similarity=0.283 Sum_probs=205.8
Q ss_pred CCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 15 GGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 15 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
||++|...|..+ ++|++.++||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.+
T Consensus 2 GG~~p~~pg~~~-grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L----------- 69 (676)
T 3qa8_A 2 GGRSPSLPTQTC-GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL----------- 69 (676)
T ss_dssp ----------------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-----------
T ss_pred CCCCCCCCCCCC-CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-----------
Confidence 678888888876 5899999999999999999999999999999988643 22345678899999999
Q ss_pred cCcccccceeccccceeec--CCCeEEEEEEeec-cccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 93 NTQASEKVIRLLNDFKIYS--RNGTHICMVFEVM-GYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~-~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
.|+||+++++.+.... ..+...++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. |++||
T Consensus 70 ---~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHr 145 (676)
T 3qa8_A 70 ---NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHR 145 (676)
T ss_dssp ---CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCC
T ss_pred ---CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccC
Confidence 7899999888765321 1356789999999 889999887643 22588999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~ 246 (393)
||||+||+++.++. ...++|+|||++...... .....+
T Consensus 146 DLKP~NILl~~~g~----------------------------------------~~~vKL~DFG~a~~~~~~~~~~~~~g 185 (676)
T 3qa8_A 146 DLKPENIVLQPGPQ----------------------------------------RLIHKIIDLGYAKELDQGELCTEFVG 185 (676)
T ss_dssp CCCSTTEEEECCSS----------------------------------------SCEEEECSCCCCCBTTSCCCCCCCCS
T ss_pred CCCHHHeEeecCCC----------------------------------------ceeEEEcccccccccccccccccccC
Confidence 99999999986652 124899999999865432 334578
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
|+.|+|||++.+..++.++||||||+++|+|++|..||.+.... ....+.......... ........
T Consensus 186 t~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~------------~~~~~~i~~~~~~~~-~~~~~l~g 252 (676)
T 3qa8_A 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP------------VQWHGKVREKSNEHI-VVYDDLTG 252 (676)
T ss_dssp CCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH------------HHSSTTCC------C-CSCCCCSS
T ss_pred CcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch------------hhhhhhhhcccchhh-hhhhhhcc
Confidence 99999999999889999999999999999999999999653210 000000000000000 00000000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..... ...+....++...+..+.+||++||..||++|||+.|+++||||+.+
T Consensus 253 ~~~~~-----------~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 253 AVKFS-----------SVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp SCCCC-----------SSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred ccccc-----------cccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 00000 00111123456688999999999999999999999999999999753
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=309.25 Aligned_cols=246 Identities=22% Similarity=0.304 Sum_probs=191.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCce----EEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTF----VALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.++||+|+||.||+|.+..+++. ||+|.+... ......+.+|+.+++.+ .|+|+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 79 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV--------------DNPHV 79 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC--------------CBTTB
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC--------------CCCCE
Confidence 57899999999999999999999888765 477766532 23346788999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .+. .+++++++ +++|.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.
T Consensus 80 v~~~~~~~----~~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~ 152 (327)
T 3poz_A 80 CRLLGICL----TST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKT 152 (327)
T ss_dssp CCEEEEEE----SSS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEE
T ss_pred eEEEEEEe----cCC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECC
Confidence 99999886 333 67888888 889999887643 4589999999999999999999998 9999999999999988
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVE 254 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE 254 (393)
++ .+||+|||+++..... .....+|+.|+|||
T Consensus 153 ~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE 189 (327)
T 3poz_A 153 PQ-------------------------------------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189 (327)
T ss_dssp TT-------------------------------------------EEEECCTTHHHHHTTTCC-------CCCGGGSCHH
T ss_pred CC-------------------------------------------CEEEccCcceeEccCCcccccccCCCccccccChH
Confidence 77 5999999998765432 12334577899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
++.+..++.++|||||||++|+|++ |..||...+.. .. ........
T Consensus 190 ~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~-~~~~~~~~-------------------------- 236 (327)
T 3poz_A 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------EI-SSILEKGE-------------------------- 236 (327)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GH-HHHHHTTC--------------------------
T ss_pred HhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH------HH-HHHHHcCC--------------------------
Confidence 9999999999999999999999999 99999755421 11 11111100
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+++.+||..||.+|||+.|++++
T Consensus 237 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 237 --------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp --------------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred --------------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 011224456788999999999999999999999875
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-40 Score=303.59 Aligned_cols=252 Identities=19% Similarity=0.256 Sum_probs=200.9
Q ss_pred eeCCeEEEEEEecccCceEEEEEEe-----CCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWD-----LQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
...++|++.+.||+|+||.||+|.+ ..+++.||+|++.... ...+.+.+|+.+++.+. .|
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h 86 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-------------NH 86 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-------------CC
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcc-------------cC
Confidence 3357999999999999999999984 4567899999987543 23466789999999983 68
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHhh
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY----------------KGIHIQNVRTIIKQVLEGLNYLH 160 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~----------------~~l~~~~~~~i~~ql~~~l~~lH 160 (393)
+|++++++.+. .+...++||||+ +++|.+++..... ..+++..+..++.|++.||+|||
T Consensus 87 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 162 (313)
T 1t46_A 87 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 162 (313)
T ss_dssp TTBCCEEEEEC----SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeeEEEEEe----cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999886 556789999999 7799998876532 14889999999999999999999
Q ss_pred hcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC
Q psy12288 161 TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH 240 (393)
Q Consensus 161 ~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~ 240 (393)
++ |++||||||+||+++.++ .++|+|||++......
T Consensus 163 ~~-~i~H~dlkp~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~ 198 (313)
T 1t46_A 163 SK-NCIHRDLAARNILLTHGR-------------------------------------------ITKICDFGLARDIKND 198 (313)
T ss_dssp HT-TCCCSCCSGGGEEEETTT-------------------------------------------EEEECCCGGGSCTTSC
T ss_pred HC-CeecCCCccceEEEcCCC-------------------------------------------CEEEcccccccccccc
Confidence 98 999999999999998766 5999999998765433
Q ss_pred C-----CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHH
Q psy12288 241 F-----ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314 (393)
Q Consensus 241 ~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 314 (393)
. ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||..... ...+.........
T Consensus 199 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~~------ 266 (313)
T 1t46_A 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV------DSKFYKMIKEGFR------ 266 (313)
T ss_dssp TTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS------SHHHHHHHHHTCC------
T ss_pred ccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc------hhHHHHHhccCCC------
Confidence 2 23345778999999999999999999999999999998 9999975542 1111111111000
Q ss_pred hcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.|++++
T Consensus 267 ----------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 267 ----------------------------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp ----------------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----------------------------------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 01123456788999999999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=303.19 Aligned_cols=248 Identities=16% Similarity=0.260 Sum_probs=189.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
...++|++.+.||+|+||.||+|.+..+ +..||+|.+.... ...+.+.+|+.+++.+ .|+|
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~ 77 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--------------DHPH 77 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC--------------CCTT
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCc
Confidence 4457999999999999999999998764 4569999886532 2345678899999988 7999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++++.+. ....++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++
T Consensus 78 iv~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~ 150 (281)
T 1mp8_A 78 IVKLIGVIT-----ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVS 150 (281)
T ss_dssp BCCEEEEEC-----SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEE
T ss_pred cceEEEEEc-----cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEEC
Confidence 999998763 34578999999 679988886543 4589999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVE 254 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE 254 (393)
.++ .++|+|||++...... .....+|+.|+|||
T Consensus 151 ~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 187 (281)
T 1mp8_A 151 SND-------------------------------------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187 (281)
T ss_dssp ETT-------------------------------------------EEEECC-------------------CCGGGCCHH
T ss_pred CCC-------------------------------------------CEEECccccccccCcccccccccCCCcccccChh
Confidence 776 5999999998765432 22335677899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
++.+..++.++||||||+++|+|++ |..||.+... .+....+.. +.
T Consensus 188 ~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~------~~~~~~i~~--~~------------------------- 234 (281)
T 1mp8_A 188 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIEN--GE------------------------- 234 (281)
T ss_dssp HHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG------GGHHHHHHT--TC-------------------------
T ss_pred hcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH------HHHHHHHHc--CC-------------------------
Confidence 9999999999999999999999996 9999976542 222222111 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||++|||+.|++++
T Consensus 235 --------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 235 --------------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp --------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 011234556788999999999999999999999864
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=304.06 Aligned_cols=269 Identities=20% Similarity=0.275 Sum_probs=205.1
Q ss_pred ccccCCeeCCeEEEEEEecccCceEEEEEE----eCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccc
Q psy12288 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAY 92 (393)
Q Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~ 92 (393)
++..+.....+|++.++||+|+||.||+|+ +..+++.||+|++.... ...+.+.+|+.+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l----------- 80 (302)
T 4e5w_A 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL----------- 80 (302)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-----------
T ss_pred ecChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-----------
Confidence 345566667889999999999999999998 56789999999987442 2346678999999998
Q ss_pred cCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 93 NTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.|+|++++++.+... ....+++||||+ +++|.+++.... ..++...+..++.|++.||++||++ |++|+|||
T Consensus 81 ---~h~~i~~~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dik 153 (302)
T 4e5w_A 81 ---YHENIVKYKGICTED--GGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLA 153 (302)
T ss_dssp ---CCTTBCCEEEEEEC-----CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCS
T ss_pred ---CCCCeeeeeeEEecC--CCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCc
Confidence 789999999988732 235689999999 779999885543 4489999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCC
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEI 245 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~ 245 (393)
|+||+++.++ .++|+|||++...... .....
T Consensus 154 p~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 190 (302)
T 4e5w_A 154 ARNVLVESEH-------------------------------------------QVKIGDFGLTKAIETDKEYYTVKDDRD 190 (302)
T ss_dssp GGGEEEEETT-------------------------------------------EEEECCCTTCEECCTTCCEEECCCCTT
T ss_pred hheEEEcCCC-------------------------------------------CEEECcccccccccCCCcceeccCCCC
Confidence 9999998776 5999999998765432 23456
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+|..|+|||++.+..++.++||||||+++|+|++|..|+... ........++........
T Consensus 191 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~~--------- 250 (302)
T 4e5w_A 191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSP-----------MALFLKMIGPTHGQMTVT--------- 250 (302)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH-----------HHHHHHHHCSCCGGGHHH---------
T ss_pred CCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcch-----------hhHHhhccCCcccccCHH---------
Confidence 788899999999998999999999999999999999886321 112222222221111000
Q ss_pred CCCCeeeccCCCcchhHHHH--hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 326 PQGNFRRIDNLKPWGLYQVL--TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...... ......+...+..+.+||.+||..||.+|||+.|+++
T Consensus 251 --------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 251 --------------RLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp --------------HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred --------------HHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 000000 0112234566788999999999999999999999986
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=310.36 Aligned_cols=250 Identities=17% Similarity=0.287 Sum_probs=195.8
Q ss_pred CCee-CCeEEEEEEecccCceEEEEEEeCCCCce----EEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 23 GDLF-NFRYHVIRKLGWGHFSTVWLSWDLQDKTF----VALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 23 ~~~~-~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
++.+ .++|++.+.||+|+||.||+|.+..+++. ||+|.+... ......+.+|+.+++.+
T Consensus 7 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-------------- 72 (325)
T 3kex_A 7 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-------------- 72 (325)
T ss_dssp CCBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC--------------
T ss_pred HhhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC--------------
Confidence 3434 46899999999999999999999888776 777776533 23346678899999988
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.|+||+++++.+. +...++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ |++||||||+|
T Consensus 73 ~h~~iv~~~~~~~-----~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~N 145 (325)
T 3kex_A 73 DHAHIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARN 145 (325)
T ss_dssp CCTTBCCEEEEEC-----BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTT
T ss_pred CCCCcCeEEEEEc-----CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchhe
Confidence 8999999998764 34588999999 789998886542 3588999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQ 249 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~ 249 (393)
||++.++ .++|+|||++...... .....+|..
T Consensus 146 il~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~ 182 (325)
T 3kex_A 146 VLLKSPS-------------------------------------------QVQVADFGVADLLPPDDKQLLYSEAKTPIK 182 (325)
T ss_dssp EEESSSS-------------------------------------------CEEECSCSGGGGSCCCTTCCC-----CCTT
T ss_pred EEECCCC-------------------------------------------eEEECCCCcccccCcccccccccCCCCccc
Confidence 9997766 4999999999865432 223456789
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|+|||++.+..++.++||||||+++|+|++ |..||.+.... .....+.. +.
T Consensus 183 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~--~~-------------------- 234 (325)
T 3kex_A 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------EVPDLLEK--GE-------------------- 234 (325)
T ss_dssp TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT------HHHHHHHT--TC--------------------
T ss_pred ccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH------HHHHHHHc--CC--------------------
Confidence 999999999999999999999999999999 99999765421 11111110 00
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.|++++
T Consensus 235 -------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 235 -------------------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp -------------------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred -------------------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011223345567799999999999999999999875
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=307.90 Aligned_cols=250 Identities=19% Similarity=0.280 Sum_probs=199.8
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
...++|++.+.||+|+||.||+|.+. .+++.||+|++.... ...+.+.+|+.+++.+ .|
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h 85 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV--------------NH 85 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC--------------CC
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC--------------CC
Confidence 34579999999999999999999874 455889999987542 2235677899999888 79
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHH
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY----------------------KGIHIQNVRTIIKQVLE 154 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~----------------------~~l~~~~~~~i~~ql~~ 154 (393)
+|++++++.+. .....++||||+ +++|.+++..... ..+++.++..++.|++.
T Consensus 86 p~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 161 (314)
T 2ivs_A 86 PHVIKLYGACS----QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQ 161 (314)
T ss_dssp TTBCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHH
T ss_pred CceeeEEEEEe----cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHH
Confidence 99999999886 566789999999 6899998876432 23788999999999999
Q ss_pred HHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcc
Q psy12288 155 GLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234 (393)
Q Consensus 155 ~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~ 234 (393)
||+|||++ |++||||||+||+++.++ .++|+|||++
T Consensus 162 ~l~~lH~~-~ivH~dikp~NIli~~~~-------------------------------------------~~kl~Dfg~~ 197 (314)
T 2ivs_A 162 GMQYLAEM-KLVHRDLAARNILVAEGR-------------------------------------------KMKISDFGLS 197 (314)
T ss_dssp HHHHHHHT-TEECCCCSGGGEEEETTT-------------------------------------------EEEECCCTTC
T ss_pred HHHHHHHC-CCcccccchheEEEcCCC-------------------------------------------CEEEcccccc
Confidence 99999998 999999999999998766 5999999998
Q ss_pred ccccCC-----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCC
Q psy12288 235 CWIDDH-----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGP 308 (393)
Q Consensus 235 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~ 308 (393)
...... .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.... .....+.. +.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~~~~~~~--~~ 269 (314)
T 2ivs_A 198 RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE------RLFNLLKT--GH 269 (314)
T ss_dssp EECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------GHHHHHHT--TC
T ss_pred ccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHhhc--CC
Confidence 765322 233456788999999999889999999999999999999 99999755421 11111110 00
Q ss_pred CChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 309 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.+++++
T Consensus 270 ---------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 270 ---------------------------------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp ---------------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---------------------------------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 011234556788999999999999999999999876
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=303.41 Aligned_cols=270 Identities=24% Similarity=0.316 Sum_probs=195.6
Q ss_pred cccCCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcc
Q psy12288 8 SYMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGR 83 (393)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~ 83 (393)
+.+.+.|........|.....+|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-- 89 (310)
T 2wqm_A 12 PVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-- 89 (310)
T ss_dssp --------CCCCGGGTTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC--
T ss_pred CCCCcChhhcCCCCcccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC--
Confidence 3445555555556667777789999999999999999999999999999999987422 2345677899999988
Q ss_pred cCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhh
Q psy12288 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLH 160 (393)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH 160 (393)
.|+|++++++.+. .....++|||++ +++|.+++... ....++...+..++.|++.||+|||
T Consensus 90 ------------~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 90 ------------NHPNVIKYYASFI----EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp ------------CCTTBCCEEEEEE----ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------CCCCEeeEEEEEE----cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 7899999999887 456799999999 66888887542 2345889999999999999999999
Q ss_pred hcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC
Q psy12288 161 TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH 240 (393)
Q Consensus 161 ~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~ 240 (393)
++ |++|+||||+||+++.++ .++|+|||++......
T Consensus 154 ~~-~i~H~dl~p~NIl~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 154 SR-RVMHRDIKPANVFITATG-------------------------------------------VVKLGDLGLGRFFSSK 189 (310)
T ss_dssp HT-TCCCCCCCGGGEEECTTS-------------------------------------------CEEECCC---------
T ss_pred hC-CeeCCCCcHHHEEEcCCC-------------------------------------------CEEEEeccceeeecCC
Confidence 98 999999999999997665 4999999998765432
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcC
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 317 (393)
.....+++.|+|||++.+..++.++||||||+++|+|++|..||.+... ....+...... +..+.
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~-~~~~~------ 257 (310)
T 2wqm_A 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQ-CDYPP------ 257 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHHHHT-TCSCC------
T ss_pred CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHHhhc-ccCCC------
Confidence 2334689999999999999899999999999999999999999965431 11111111110 00000
Q ss_pred cccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
......+..+.++|.+||..||.+|||+.+++++
T Consensus 258 --------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 258 --------------------------------LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp --------------------------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --------------------------------CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0013345678899999999999999999999864
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=318.32 Aligned_cols=246 Identities=18% Similarity=0.280 Sum_probs=198.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ...+.+.+|+.+++.+ .|+|+++++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~~~ 178 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY--------------SHPNIVRLI 178 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC--------------CCTTBCCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC--------------CCCCEEEEE
Confidence 468999999999999999999999999999999987532 2235678899999988 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. .....++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 179 ~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~-- 250 (377)
T 3cbl_A 179 GVCT----QKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKN-- 250 (377)
T ss_dssp EEEC----SSSSCEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTC--
T ss_pred EEEe----cCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCC--
Confidence 9886 556689999999 789998886543 3488999999999999999999998 999999999999997666
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC-----CCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF-----ADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||+++...... ....++..|+|||++.+
T Consensus 251 -----------------------------------------~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 289 (377)
T 3cbl_A 251 -----------------------------------------VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289 (377)
T ss_dssp -----------------------------------------CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHH
T ss_pred -----------------------------------------cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhcc
Confidence 49999999987543221 11234667999999998
Q ss_pred CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
..++.++|||||||++|+|++ |..||...+ .... ........
T Consensus 290 ~~~~~~~DvwslG~il~el~t~g~~p~~~~~------~~~~-~~~~~~~~------------------------------ 332 (377)
T 3cbl_A 290 GRYSSESDVWSFGILLWETFSLGASPYPNLS------NQQT-REFVEKGG------------------------------ 332 (377)
T ss_dssp CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC------HHHH-HHHHHTTC------------------------------
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHH-HHHHHcCC------------------------------
Confidence 889999999999999999998 999997544 1111 11111101
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.++|.+||..||.+|||++++++
T Consensus 333 ----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 333 ----------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 01123445678889999999999999999999976
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=311.91 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=200.7
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
+...++|++.+.||+|+||.||+|.+.. +++.||+|+++... ...+.+.+|+.+++.+ .
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~ 108 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF--------------D 108 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC--------------C
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC--------------C
Confidence 4456799999999999999999999873 45889999987542 2245678899999998 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC----------------------CCCCCHHHHHHHHHHHH
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD----------------------YKGIHIQNVRTIIKQVL 153 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------------~~~l~~~~~~~i~~ql~ 153 (393)
|+|++++++.+. .+...++||||+ +++|.+++.... ...+++.++..++.||+
T Consensus 109 hp~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 184 (343)
T 1luf_A 109 NPNIVKLLGVCA----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVA 184 (343)
T ss_dssp CTTBCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEc----cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHH
Confidence 999999999886 566789999999 779999887632 14588999999999999
Q ss_pred HHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCc
Q psy12288 154 EGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGN 233 (393)
Q Consensus 154 ~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~ 233 (393)
.||+|||++ |++||||||+||+++.++ .++|+|||+
T Consensus 185 ~~l~~LH~~-~ivH~Dlkp~NIl~~~~~-------------------------------------------~~kl~Dfg~ 220 (343)
T 1luf_A 185 AGMAYLSER-KFVHRDLATRNCLVGENM-------------------------------------------VVKIADFGL 220 (343)
T ss_dssp HHHHHHHHT-TCCCSCCSGGGEEECGGG-------------------------------------------CEEECCCSC
T ss_pred HHHHHHHhC-CeecCCCCcceEEECCCC-------------------------------------------eEEEeecCC
Confidence 999999998 999999999999998766 499999999
Q ss_pred cccccC-----CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhC
Q psy12288 234 ACWIDD-----HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVG 307 (393)
Q Consensus 234 ~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g 307 (393)
+..... ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.+ .......+.. +
T Consensus 221 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~--~ 292 (343)
T 1luf_A 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA------HEEVIYYVRD--G 292 (343)
T ss_dssp HHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHT--T
T ss_pred CcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC------hHHHHHHHhC--C
Confidence 875432 1234467889999999999999999999999999999999 999997544 2222211111 1
Q ss_pred CCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 308 PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 308 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.. ...+...+..+.++|++||..||.+|||+.+++++
T Consensus 293 ~~---------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 293 NI---------------------------------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp CC---------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred Cc---------------------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 10 01224456788999999999999999999999876
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=309.29 Aligned_cols=250 Identities=23% Similarity=0.322 Sum_probs=183.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..+|++.++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+. .|+|++++++
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-------------~h~~iv~~~~ 93 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS-------------GHPNIVQFCS 93 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT-------------TSTTBCCEEE
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc-------------cCCChhhccc
Confidence 469999999999999999999999999999999875432 33456788999999982 4899999988
Q ss_pred cceee----cCCCeEEEEEEeeccccHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEe
Q psy12288 106 DFKIY----SRNGTHICMVFEVMGYNLLRLIAR-SDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMC 178 (393)
Q Consensus 106 ~~~~~----~~~~~~~~iv~e~~~~~l~~~~~~-~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~ 178 (393)
.+... ......++++||+++++|.+++.. .....+++.++..++.||+.||+|||++ | ++||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~ 172 (337)
T 3ll6_A 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLS 172 (337)
T ss_dssp EEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEEC
T ss_pred cccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEEC
Confidence 88432 235667999999999999988865 2234589999999999999999999998 8 99999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC---------------CC
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF---------------AD 243 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~---------------~~ 243 (393)
.++ .++|+|||++....... ..
T Consensus 173 ~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (337)
T 3ll6_A 173 NQG-------------------------------------------TIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209 (337)
T ss_dssp TTS-------------------------------------------CEEBCCCTTCBCCSSCC-----------------
T ss_pred CCC-------------------------------------------CEEEecCccceeccccCcccccccccccchhhcc
Confidence 766 49999999987654321 13
Q ss_pred CCCCCCCchhHHH---hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 244 EIQTRQYRSVEVL---IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 244 ~~~t~~y~aPE~~---~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
..+|+.|+|||++ .+..++.++||||||+++|+|++|..||....... +....-.
T Consensus 210 ~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----------~~~~~~~------------ 267 (337)
T 3ll6_A 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----------IVNGKYS------------ 267 (337)
T ss_dssp --------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------------CC------------
T ss_pred ccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----------hhcCccc------------
Confidence 4589999999998 45568899999999999999999999996433211 0000000
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.......+..+.+||++||..||.+|||+.|+++|
T Consensus 268 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 268 ----------------------------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp ----------------------------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ----------------------------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00012233457799999999999999999999986
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=325.68 Aligned_cols=264 Identities=13% Similarity=0.049 Sum_probs=190.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCc-ccc-c------Ccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHS-SAY-N------TQA 96 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~-~~~-~------~~~ 96 (393)
.|++.+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.+.+...... ..+ . ...
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 588999999999999999999999999999998732 2224667889988888865221100 000 0 000
Q ss_pred cccceeccccceee-cCCCeEEEEEEeeccccHHHHHHh-----cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 97 SEKVIRLLNDFKIY-SRNGTHICMVFEVMGYNLLRLIAR-----SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 97 ~~~i~~~~~~~~~~-~~~~~~~~iv~e~~~~~l~~~~~~-----~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
.++...+...+... ......++++|+.++++|.+++.. .....+++..+..++.|++.||+|||++ ||+||||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHrDi 237 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYL 237 (413)
T ss_dssp CCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred cCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCc
Confidence 01111111111100 001234788999999999988842 2223367778889999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQY 250 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y 250 (393)
||+|||++.++ .+||+|||+++..+......+| +.|
T Consensus 238 Kp~NILl~~~~-------------------------------------------~~kL~DFG~a~~~~~~~~~~~g-~~y 273 (413)
T 3dzo_A 238 RPVDIVLDQRG-------------------------------------------GVFLTGFEHLVRDGASAVSPIG-RGF 273 (413)
T ss_dssp CGGGEEECTTC-------------------------------------------CEEECCGGGCEETTEEECCCCC-TTT
T ss_pred ccceEEEecCC-------------------------------------------eEEEEeccceeecCCccccCCC-Cce
Confidence 99999998776 4999999999877666666677 999
Q ss_pred chhHHH----------hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccc
Q psy12288 251 RSVEVL----------IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320 (393)
Q Consensus 251 ~aPE~~----------~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 320 (393)
+|||++ .+..++.++|||||||++|+|++|+.||...+......
T Consensus 274 ~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~-------------------------- 327 (413)
T 3dzo_A 274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE-------------------------- 327 (413)
T ss_dssp CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG--------------------------
T ss_pred eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH--------------------------
Confidence 999999 44457889999999999999999999997544211100
Q ss_pred ccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.++. .....+..+.+||.+||..||.+|||+.|+++||||+.+
T Consensus 328 ----------------------~~~~----~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 328 ----------------------WIFR----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp ----------------------GGGS----SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred ----------------------HHHh----hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 0000 011334678899999999999999999999999999764
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=305.70 Aligned_cols=252 Identities=17% Similarity=0.236 Sum_probs=199.7
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCc-----eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKT-----FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
...++|++.+.||+|+||.||+|.+..++. .||+|.+.... ...+.+.+|+.+++.+. .|
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~h 109 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG-------------QH 109 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-------------CC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhc-------------CC
Confidence 345789999999999999999999887654 79999987543 23456789999999983 68
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD------------YKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
+|++++++.+. .+...++||||+ +++|.+++.... ...++...+..++.|++.||+|||++ |
T Consensus 110 ~~iv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ 184 (333)
T 2i1m_A 110 ENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-N 184 (333)
T ss_dssp TTBCCEEEEEC----SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred CCeeeEEEEEe----cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-C
Confidence 99999999886 566789999999 779998886531 23478999999999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---- 240 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---- 240 (393)
++||||||+||+++.++ .++|+|||++......
T Consensus 185 ivH~Dlkp~NIl~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~ 221 (333)
T 2i1m_A 185 CIHRDVAARNVLLTNGH-------------------------------------------VAKIGDFGLARDIMNDSNYI 221 (333)
T ss_dssp EECSCCSGGGCEEEGGG-------------------------------------------EEEBCCCGGGCCGGGCTTSE
T ss_pred cccCCcccceEEECCCC-------------------------------------------eEEECcccccccccccccee
Confidence 99999999999998766 5999999998765322
Q ss_pred -CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 241 -FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 241 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
.....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+... ...+.........
T Consensus 222 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~~~~~~~~~~---------- 285 (333)
T 2i1m_A 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV------NSKFYKLVKDGYQ---------- 285 (333)
T ss_dssp ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS------SHHHHHHHHHTCC----------
T ss_pred ecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch------hHHHHHHHhcCCC----------
Confidence 123345778999999999999999999999999999998 9999976542 1122222111100
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.|++++
T Consensus 286 ------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 286 ------------------------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp ------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ------------------------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 01123345678899999999999999999999874
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=308.31 Aligned_cols=251 Identities=18% Similarity=0.244 Sum_probs=198.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
-.++|++.+.||+|+||.||+|.+. .++..||+|++... ....+.+.+|+.+++.+. .|+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~hp 109 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-------------SHE 109 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC-------------CCT
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhc-------------CCC
Confidence 3578999999999999999999973 35678999998743 234567889999999983 689
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHH
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY---------------------KGIHIQNVRTIIKQVLEGL 156 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---------------------~~l~~~~~~~i~~ql~~~l 156 (393)
|++++++.+. .....++||||+ +++|.+++..... ..+++..+..++.||+.||
T Consensus 110 ~iv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL 185 (344)
T 1rjb_A 110 NIVNLLGACT----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM 185 (344)
T ss_dssp TBCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHH
T ss_pred CeeeEEEEEe----eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHH
Confidence 9999999887 556789999999 7799998876432 2378899999999999999
Q ss_pred HHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccc
Q psy12288 157 NYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236 (393)
Q Consensus 157 ~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~ 236 (393)
+|||++ |++||||||+||+++.++ .++|+|||++..
T Consensus 186 ~~LH~~-~ivH~Dikp~NIll~~~~-------------------------------------------~~kL~Dfg~~~~ 221 (344)
T 1rjb_A 186 EFLEFK-SCVHRDLAARNVLVTHGK-------------------------------------------VVKICDFGLARD 221 (344)
T ss_dssp HHHHHT-TEEETTCSGGGEEEETTT-------------------------------------------EEEECCCGGGSC
T ss_pred HHHHhC-CcccCCCChhhEEEcCCC-------------------------------------------cEEeCCCccCcc
Confidence 999998 999999999999998766 599999999876
Q ss_pred ccCCC-----CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 237 IDDHF-----ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 237 ~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
..... ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.... ..+...... +.
T Consensus 222 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~~~~~~~~-~~-- 292 (344)
T 1rjb_A 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD------ANFYKLIQN-GF-- 292 (344)
T ss_dssp GGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHHHHHT-TC--
T ss_pred cccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH------HHHHHHHhc-CC--
Confidence 54321 23346788999999999999999999999999999998 99999765421 111111110 00
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.+||.+||..||.+|||+.++++|
T Consensus 293 -------------------------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 293 -------------------------------------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp -------------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------------------------------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 011223456788999999999999999999999886
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=321.98 Aligned_cols=252 Identities=19% Similarity=0.304 Sum_probs=202.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.++||+|+||.||+|.+. ++..||||+++......+.+.+|+.+++.+ .|+|++++++.
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~l~~~ 251 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL--------------QHDKLVKLHAV 251 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTC--------------CCTTBCCEEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhC--------------CCCCEeeEEEE
Confidence 578999999999999999999875 467899999987666678889999999998 79999999887
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ....++||||+ +++|.+++.......++...+..++.|++.||+|||++ +++||||||+|||++.++
T Consensus 252 ~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~---- 321 (454)
T 1qcf_A 252 VT-----KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASL---- 321 (454)
T ss_dssp EC-----SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTC----
T ss_pred Ee-----CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCC----
Confidence 64 34588999999 78999998754333488899999999999999999998 999999999999998765
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||+++..... .....+|..|+|||++....+
T Consensus 322 ---------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 362 (454)
T 1qcf_A 322 ---------------------------------------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362 (454)
T ss_dssp ---------------------------------------CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCC
T ss_pred ---------------------------------------cEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCC
Confidence 4999999999865321 233446788999999999999
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++||||||+++|+|++ |+.||.+.+ .......+.. +.
T Consensus 363 ~~~~DvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~--~~-------------------------------- 402 (454)
T 1qcf_A 363 TIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRALER--GY-------------------------------- 402 (454)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHH--TC--------------------------------
T ss_pred CcHHHHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC--------------------------------
Confidence 999999999999999999 999997544 2222222211 10
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC--CCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH--PWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h--p~~~~~ 389 (393)
..+.+..++..+.++|.+||..||++|||++++++. .++...
T Consensus 403 -------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 403 -------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 011223456788999999999999999999998763 444433
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=311.75 Aligned_cols=260 Identities=17% Similarity=0.217 Sum_probs=200.3
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEE-----eCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCccccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSW-----DLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYN 93 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 93 (393)
.+.+...++|++.+.||+|+||.||+|. +..+++.||+|++... ......+.+|+.+++.+
T Consensus 23 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------------ 90 (327)
T 2yfx_A 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF------------ 90 (327)
T ss_dssp GSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC------------
T ss_pred hcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC------------
Confidence 4556677899999999999999999998 4567889999998643 22345677899999998
Q ss_pred CcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 94 TQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY-----KGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.|+|++++++.+. .....++||||+ +++|.+++..... ..++...+..++.|++.||+|||++ |++|
T Consensus 91 --~h~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H 163 (327)
T 2yfx_A 91 --NHQNIVRCIGVSL----QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIH 163 (327)
T ss_dssp --CCTTBCCEEEEEC----SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred --CCCCCCeEEEEEc----CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-Ceec
Confidence 7999999998887 556689999999 8899998876432 3488899999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FA 242 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~ 242 (393)
|||||+||+++.++. ...++|+|||++...... ..
T Consensus 164 ~dlkp~NIli~~~~~----------------------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~ 203 (327)
T 2yfx_A 164 RDIAARNCLLTCPGP----------------------------------------GRVAKIGDFGMARDIYRASYYRKGG 203 (327)
T ss_dssp SCCCGGGEEESCSST----------------------------------------TCCEEECCCHHHHHHHC------CC
T ss_pred CcCCHhHEEEecCCC----------------------------------------cceEEECccccccccccccccccCC
Confidence 999999999975442 114999999988654221 22
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||.... .......+.. +..
T Consensus 204 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~--~~~------------ 263 (327)
T 2yfx_A 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLEFVTS--GGR------------ 263 (327)
T ss_dssp GGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHT--TCC------------
T ss_pred CcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC------HHHHHHHHhc--CCC------------
Confidence 3456889999999999999999999999999999998 999997543 2222111111 000
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
...+...+..+.++|.+||..||.+|||+.++++|.|+
T Consensus 264 ---------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 264 ---------------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp ---------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 01123456788899999999999999999999998653
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=318.29 Aligned_cols=258 Identities=19% Similarity=0.258 Sum_probs=197.6
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
.++++|++.++||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.+ .+.+..+
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~--------------~~~i~~i 68 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQG--------------GTGIPNV 68 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTT--------------STTCCCE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcC--------------CCCCCeE
Confidence 56779999999999999999999999999999999887543 34568899999999943 2222222
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
..+. ......++||||++++|.+++.... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.+..
T Consensus 69 ~~~~---~~~~~~~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~-- 141 (483)
T 3sv0_A 69 RWFG---VEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRR-- 141 (483)
T ss_dssp EEEE---EETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGG--
T ss_pred EEEE---eeCCEEEEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCC--
Confidence 2222 2466789999999999999987543 4599999999999999999999998 9999999999999953211
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----------CCCCCCCCCchhH
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----------ADEIQTRQYRSVE 254 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----------~~~~~t~~y~aPE 254 (393)
...+||+|||++....... ....||+.|+|||
T Consensus 142 --------------------------------------~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 183 (483)
T 3sv0_A 142 --------------------------------------ANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVN 183 (483)
T ss_dssp --------------------------------------TTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred --------------------------------------CCeEEEEeCCcceeccCCccccccccccccccCCCccccCHH
Confidence 1159999999997654322 1457899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++|||||||++|+|++|+.||....... ....+..+....-..+.+
T Consensus 184 ~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~---------------------- 238 (483)
T 3sv0_A 184 THLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT---KKQKYEKISEKKVATSIE---------------------- 238 (483)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS---HHHHHHHHHHHHHHSCHH----------------------
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh---HHHHHHHHhhccccccHH----------------------
Confidence 9999999999999999999999999999998655322 122222221110000000
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+....+..+.+||.+||..||.+||++.+|++
T Consensus 239 ---------------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 239 ---------------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp ---------------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred ---------------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 011244578899999999999999999988765
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=310.10 Aligned_cols=261 Identities=19% Similarity=0.285 Sum_probs=180.2
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc--chhhHHHHH-HHHHhcccCCCCcccccCcccccce
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY--ADTARDEIV-LLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.-.++|++.+.||+|+||.||+|.+..+++.||||++...... ......|+. +++.+ .|+|++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~--------------~h~niv 84 (327)
T 3aln_A 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS--------------DCPYIV 84 (327)
T ss_dssp CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSC--------------CCTTBC
T ss_pred cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcC--------------CCCcEe
Confidence 3457899999999999999999999999999999998754221 223333443 33333 799999
Q ss_pred eccccceeecCCCeEEEEEEeeccccHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR---SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~---~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
++++.+. .....++||||+.+++.+++.. .....++...+..++.|++.||.+||++.|++||||||+||+++
T Consensus 85 ~~~~~~~----~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~ 160 (327)
T 3aln_A 85 QFYGALF----REGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD 160 (327)
T ss_dssp CEEEEEE----CSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE
T ss_pred eeeeEEE----eCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc
Confidence 9999887 5678999999998888877753 22345899999999999999999999855999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVL 256 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~ 256 (393)
.++ .+||+|||++...... .....||+.|+|||++
T Consensus 161 ~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~ 197 (327)
T 3aln_A 161 RSG-------------------------------------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERI 197 (327)
T ss_dssp TTT-------------------------------------------EEEECCCSSSCC----------------------
T ss_pred CCC-------------------------------------------CEEEccCCCceecccccccccCCCCccccCceee
Confidence 776 5999999998765432 2234689999999998
Q ss_pred ----hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 257 ----IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 257 ----~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
.+..++.++||||||+++|+|++|..||....... .. +.... .. ....
T Consensus 198 ~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~---~~~~~------------~~--------~~~~ 249 (327)
T 3aln_A 198 DPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQ---LTQVV------------KG--------DPPQ 249 (327)
T ss_dssp --------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------CCCC------------CS--------CCCC
T ss_pred ccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HH---HHHHh------------cC--------CCCC
Confidence 45568999999999999999999999997533110 00 00000 00 0000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.. .......+..+.+||.+||..||.+|||+.|+++||||..
T Consensus 250 ~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 250 LS--------------NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM 291 (327)
T ss_dssp CC--------------CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred CC--------------CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence 00 0011235678899999999999999999999999999964
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=305.39 Aligned_cols=255 Identities=16% Similarity=0.200 Sum_probs=196.3
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCC-------ceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDK-------TFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
...++|++.+.||+|+||.||+|.+..++ ..||+|++.... ...+.+.+|+.+++.+ .
T Consensus 5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l--------------~ 70 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL--------------S 70 (289)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS--------------C
T ss_pred echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC--------------C
Confidence 34578999999999999999999998877 469999986432 3456688999999998 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+. .+...++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++||||||+||
T Consensus 71 h~~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NI 144 (289)
T 4fvq_A 71 HKHLVLNYGVCV----CGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNI 144 (289)
T ss_dssp CTTBCCEEEEEC----CTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGE
T ss_pred CCCEeEEEEEEE----eCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceE
Confidence 999999999887 556688999999 689998887643 3488999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHH
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEV 255 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~ 255 (393)
+++.++... ......++|+|||++...... ....+|+.|+|||+
T Consensus 145 ll~~~~~~~-----------------------------------~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~ 188 (289)
T 4fvq_A 145 LLIREEDRK-----------------------------------TGNPPFIKLSDPGISITVLPK-DILQERIPWVPPEC 188 (289)
T ss_dssp EEEECCBGG-----------------------------------GTBCCEEEECCCCSCTTTSCH-HHHHHTTTTSCHHH
T ss_pred EEecCCccc-----------------------------------ccccceeeeccCcccccccCc-cccCCcCcccCHHH
Confidence 998776310 011124999999998654322 12346888999999
Q ss_pred Hhc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIG-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+ ..++.++||||||+++|+|++|..|+.... ...........
T Consensus 189 ~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~------~~~~~~~~~~~----------------------------- 233 (289)
T 4fvq_A 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL------DSQRKLQFYED----------------------------- 233 (289)
T ss_dssp HHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS------CHHHHHHHHHT-----------------------------
T ss_pred hCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc------chHHHHHHhhc-----------------------------
Confidence 987 668999999999999999999554443222 11111111111
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...++...+..+.++|.+||..||.+|||++|+++|
T Consensus 234 -------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 234 -------------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp -------------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred -------------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 111222334567899999999999999999999987
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-40 Score=300.19 Aligned_cols=246 Identities=20% Similarity=0.314 Sum_probs=198.2
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.+.||+|+||.||+|.+. ++..||+|.+.......+.+.+|+.+++.+ .|+|++++++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~~ 75 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------------QHQRLVRLYA 75 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC--------------CCTTBCCEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhC--------------CCcCcceEEE
Confidence 3468999999999999999999875 567899999987666677889999999999 7899999988
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. ....++|||++ +++|.+++.......++...+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 76 ~~~-----~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~--- 146 (279)
T 1qpc_A 76 VVT-----QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTL--- 146 (279)
T ss_dssp EEC-----SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTS---
T ss_pred EEc-----CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCC---
Confidence 764 33478999999 78999888654322488999999999999999999998 999999999999997665
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~ 260 (393)
.++|+|||++...... .....++..|+|||++.+..
T Consensus 147 ----------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 186 (279)
T 1qpc_A 147 ----------------------------------------SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186 (279)
T ss_dssp ----------------------------------------CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCE
T ss_pred ----------------------------------------CEEECCCcccccccCcccccccCCCCccCccChhhhccCC
Confidence 4999999998765432 22345678899999999888
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++||||||+++|+|++ |..||.+.+ .......+.. +.
T Consensus 187 ~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~--~~------------------------------- 227 (279)
T 1qpc_A 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMT------NPEVIQNLER--GY------------------------------- 227 (279)
T ss_dssp ECHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TC-------------------------------
T ss_pred CCchhhhHHHHHHHHHHHhCCCCCCcccC------HHHHHHHHhc--cc-------------------------------
Confidence 9999999999999999999 999997544 2222211111 00
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.+++.+||..||++|||++++++
T Consensus 228 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 228 --------RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00122345678899999999999999999999876
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=304.60 Aligned_cols=246 Identities=22% Similarity=0.296 Sum_probs=191.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceE----EEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFV----ALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----aiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.++||+|+||.||+|.+..+++.+ ++|.+... ......+.+|+.+++.+ .|+|+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l--------------~hp~i 79 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV--------------DNPHV 79 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC--------------CBTTB
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC--------------CCCCe
Confidence 579999999999999999999998888765 66655432 23346678899999988 79999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .+. .+++++++ +++|.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.
T Consensus 80 v~~~~~~~----~~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~ 152 (327)
T 3lzb_A 80 CRLLGICL----TST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKT 152 (327)
T ss_dssp CCCCEEEE----SSS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEE
T ss_pred eEEEEEEe----cCC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcC
Confidence 99999886 333 67888888 889999887643 4589999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVE 254 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE 254 (393)
++ .++|+|||++...... .....+|+.|+|||
T Consensus 153 ~~-------------------------------------------~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE 189 (327)
T 3lzb_A 153 PQ-------------------------------------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189 (327)
T ss_dssp TT-------------------------------------------EEEECCTTC----------------CCCGGGSCHH
T ss_pred CC-------------------------------------------CEEEccCcceeEccCccccccccCCCccccccCHH
Confidence 76 4999999999765322 22334577899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+..++.++||||||+++|+|++ |..||.+.... .... ......
T Consensus 190 ~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~-~~~~~~-------------------------- 236 (327)
T 3lzb_A 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------EISS-ILEKGE-------------------------- 236 (327)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GHHH-HHHTTC--------------------------
T ss_pred HHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH------HHHH-HHHcCC--------------------------
Confidence 9999999999999999999999999 99999765421 1111 111000
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|++||..||.+|||+.|+++.
T Consensus 237 --------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 237 --------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp --------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --------------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 011224456788999999999999999999999863
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=311.22 Aligned_cols=274 Identities=20% Similarity=0.211 Sum_probs=209.7
Q ss_pred CCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcc
Q psy12288 11 EYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
...++...|+.+++.+.++|++.+.||+|+||.||+|.+ +++.||||++... ....+.+|..+++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~-------- 92 (342)
T 1b6c_B 25 TSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR--EERSWFREAEIYQTVM-------- 92 (342)
T ss_dssp CTTCCSSSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHSC--------
T ss_pred ccCCCCCCceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch--hHHHHHHHHHHHHHhh--------
Confidence 345678889999999999999999999999999999987 5889999998754 2456678888888742
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh--------h
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLH--------T 161 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH--------~ 161 (393)
..|+|++++++.+..........++||||+ +++|.+++... .+++..+..++.|++.||+||| +
T Consensus 93 ----l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~ 165 (342)
T 1b6c_B 93 ----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165 (342)
T ss_dssp ----CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB
T ss_pred ----cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 179999999998874333334799999999 66999988764 4899999999999999999999 7
Q ss_pred cCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-
Q psy12288 162 QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH- 240 (393)
Q Consensus 162 ~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~- 240 (393)
. +++||||||+||+++.++ .++|+|||++......
T Consensus 166 ~-~ivH~Dlkp~NIll~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~ 201 (342)
T 1b6c_B 166 P-AIAHRDLKSKNILVKKNG-------------------------------------------TCCIADLGLAVRHDSAT 201 (342)
T ss_dssp C-EEECSCCSGGGEEECTTS-------------------------------------------CEEECCCTTCEEEETTT
T ss_pred C-CeeeCCCCHHHEEECCCC-------------------------------------------CEEEEECCCceeccccc
Confidence 7 999999999999998766 4999999998765432
Q ss_pred ------CCCCCCCCCCchhHHHhcCC------CCchhhHHhHHHHHHHHHhC----------CCCCCCCCCCCCCCcHHH
Q psy12288 241 ------FADEIQTRQYRSVEVLIGAG------YGPAADIWSTACMAFELATG----------DYLFDPKAGKEYSRDDDH 298 (393)
Q Consensus 241 ------~~~~~~t~~y~aPE~~~~~~------~~~~~DiwSlG~~l~ell~g----------~~pf~~~~~~~~~~~~~~ 298 (393)
.....+|+.|+|||++.+.. ++.++||||||+++|+|++| ..||........ ....
T Consensus 202 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--~~~~ 279 (342)
T 1b6c_B 202 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP--SVEE 279 (342)
T ss_dssp TEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHH
T ss_pred cccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc--cHHH
Confidence 23457899999999998763 33689999999999999999 778865443221 1111
Q ss_pred HHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH
Q psy12288 299 LAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA 378 (393)
Q Consensus 299 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 378 (393)
+..........|. . + .. -.+...+..+.+||.+||..||.+|||+.
T Consensus 280 ~~~~~~~~~~~~~-~------------------------~--------~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 325 (342)
T 1b6c_B 280 MRKVVCEQKLRPN-I------------------------P--------NR-WQSCEALRVMAKIMRECWYANGAARLTAL 325 (342)
T ss_dssp HHHHHTTSCCCCC-C------------------------C--------GG-GGTSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HHHHHHHHHhCCC-C------------------------c--------cc-ccchhHHHHHHHHHHHHhccChhhCCCHH
Confidence 1111110000000 0 0 00 01235667899999999999999999999
Q ss_pred HHhcC
Q psy12288 379 DCLRH 383 (393)
Q Consensus 379 ell~h 383 (393)
|+++|
T Consensus 326 ~i~~~ 330 (342)
T 1b6c_B 326 RIKKT 330 (342)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=300.00 Aligned_cols=254 Identities=20% Similarity=0.293 Sum_probs=189.8
Q ss_pred ccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 21 QIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
..++..+++|++.++||+|+||.||+|.+.. .||+|+++.... ..+.+.+|+.+++.+ .|
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h 79 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT--------------RH 79 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTC--------------CC
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhC--------------CC
Confidence 4667778899999999999999999997643 499999875432 235678899999888 78
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+|++++++.. .....++||||+ +++|.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+
T Consensus 80 ~~iv~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil 152 (289)
T 3og7_A 80 VNILLFMGYS-----TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIF 152 (289)
T ss_dssp TTBCCEEEEE-----CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEE
T ss_pred CcEEEEEeec-----cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEE
Confidence 9999888743 344588999999 788888875443 4589999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~ 251 (393)
++.++ .++|+|||++..... ......||+.|+
T Consensus 153 ~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~ 189 (289)
T 3og7_A 153 LHEDN-------------------------------------------TVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189 (289)
T ss_dssp EETTT-------------------------------------------EEEECCCC------------------CCCTTC
T ss_pred ECCCC-------------------------------------------CEEEccceeccccccccccccccccCCCcccc
Confidence 98776 599999999875432 123346899999
Q ss_pred hhHHHh---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 252 SVEVLI---GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 252 aPE~~~---~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|||++. +..++.++||||||+++|+|++|+.||.... ....+..........+.
T Consensus 190 aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~----------------- 246 (289)
T 3og7_A 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN------NRDQIIEMVGRGSLSPD----------------- 246 (289)
T ss_dssp CHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC------CHHHHHHHHHHTSCCCC-----------------
T ss_pred CchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc------hHHHHHHHhcccccCcc-----------------
Confidence 999997 5567889999999999999999999997654 22333322221111100
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...++..+.+||.+||..||.+|||+.++++.
T Consensus 247 -------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 247 -------------------LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp -------------------TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------------hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 001224556789999999999999999999999864
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=301.13 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=188.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||+|.+. ++.||+|.+... ...+.+.+|+.+++.+ .|+|++++++.+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l--------------~hp~iv~~~~~~ 70 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-SERKAFIVELRQLSRV--------------NHPNIVKLYGAC 70 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-THHHHHHHHHHHHHHC--------------CCTTBCCEEEBC
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-hHHHHHHHHHHHHhcC--------------CCCCcCeEEEEE
Confidence 57999999999999999999874 788999998743 3456788999999998 799999998877
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhh---cCCeeeccCCCCceEEeechh
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDY-KGIHIQNVRTIIKQVLEGLNYLHT---QCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~---~~~i~H~dlkp~NIl~~~~~~ 182 (393)
. + ..++||||+ +++|.+.+..... ..++...+..++.|++.||+|||+ + |++||||||+||+++.++.
T Consensus 71 ~----~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~ 143 (307)
T 2eva_A 71 L----N--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGT 143 (307)
T ss_dssp T----T--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTT
T ss_pred c----C--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCC
Confidence 5 2 268999999 7799998875432 236788999999999999999999 6 8999999999999986653
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||++...........||+.|+|||++.+..++
T Consensus 144 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 181 (307)
T 2eva_A 144 ------------------------------------------VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYS 181 (307)
T ss_dssp ------------------------------------------EEEECCCCC------------CCTTSSCHHHHTCCCCC
T ss_pred ------------------------------------------EEEEcccccccccccccccCCCCCceEChhhhCCCCCC
Confidence 47999999998766555566789999999999998899
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++||||||+++|+|++|+.||...... ....... ...+..+
T Consensus 182 ~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~--~~~~~~~-------------------------------- 223 (307)
T 2eva_A 182 EKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWA--VHNGTRP-------------------------------- 223 (307)
T ss_dssp THHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHH--HHTTCCC--------------------------------
T ss_pred cHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHH--HhcCCCC--------------------------------
Confidence 9999999999999999999999654321 1111000 0111110
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
......+..+.++|.+||..||.+|||+++++++
T Consensus 224 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 224 -------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp -------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1123455678899999999999999999999874
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=297.11 Aligned_cols=246 Identities=18% Similarity=0.225 Sum_probs=194.7
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.++|++.+.||+|+||.||+|.+..+ +..||+|.+.... ...+.+.+|+.+++.+ .|+|++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~ 76 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL--------------DHPHIV 76 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH--------------CCTTBC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC--------------CCCCcc
Confidence 46899999999999999999986543 4469999987542 2346678899999999 799999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. ....++|||++ +++|.+.+.... ..++...+..++.|++.||++||++ |++|+||||+||+++.+
T Consensus 77 ~~~~~~~-----~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~ 149 (281)
T 3cc6_A 77 KLIGIIE-----EEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASP 149 (281)
T ss_dssp CEEEEEC-----SSSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEET
T ss_pred eEEEEEc-----CCCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCC
Confidence 9998764 23468999999 689988886643 4489999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVL 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~ 256 (393)
+ .++|+|||++...... .....+|+.|+|||++
T Consensus 150 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 186 (281)
T 3cc6_A 150 E-------------------------------------------CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186 (281)
T ss_dssp T-------------------------------------------EEEECCCCGGGCC---------CCCCCGGGCCHHHH
T ss_pred C-------------------------------------------cEEeCccCCCcccccccccccccCCCCcceeCchhh
Confidence 6 5999999998765432 2234567889999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 257 IGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
.+..++.++||||||+++|+|++ |+.||..... ......+... ..
T Consensus 187 ~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~------~~~~~~~~~~-~~--------------------------- 232 (281)
T 3cc6_A 187 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN------KDVIGVLEKG-DR--------------------------- 232 (281)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG------GGHHHHHHHT-CC---------------------------
T ss_pred ccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh------HHHHHHHhcC-CC---------------------------
Confidence 99999999999999999999998 9999975442 2222211110 00
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.|++++
T Consensus 233 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 233 -------------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp -------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 11223456778899999999999999999999875
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-40 Score=319.41 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=200.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+.+++.+ .|+|++++++.
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~hp~iv~~~~~ 247 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL--------------RHEKLVQLYAV 247 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhC--------------CCCCEeeEEEE
Confidence 5789999999999999999998875 45699999987665667889999999999 89999999987
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. . ...++||||+ +++|.+++.......++..++..++.|++.||+|||++ |++||||||+|||++.++
T Consensus 248 ~~----~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~---- 317 (452)
T 1fmk_A 248 VS----E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENL---- 317 (452)
T ss_dssp EC----S-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGG----
T ss_pred Ec----C-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCC----
Confidence 64 2 4578999999 78999998654334588999999999999999999998 999999999999998666
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||+++..... .....+|..|+|||++.+..+
T Consensus 318 ---------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 358 (452)
T 1fmk_A 318 ---------------------------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358 (452)
T ss_dssp ---------------------------------------CEEECCCCTTC--------------CCGGGSCHHHHHHCCC
T ss_pred ---------------------------------------CEEECCCccceecCCCceecccCCcccccccCHhHHhcCCC
Confidence 4999999999765432 122345778999999999999
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++||||||+++|+|++ |..||.+.. ..+.+..+.. +.
T Consensus 359 ~~~sDvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~--~~-------------------------------- 398 (452)
T 1fmk_A 359 TIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVER--GY-------------------------------- 398 (452)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TC--------------------------------
T ss_pred CccccHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC--------------------------------
Confidence 999999999999999999 999997544 2222221111 10
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC--CCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH--PWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h--p~~~~~~ 390 (393)
..+.+..++..+.++|.+||..||++|||++++++. .++....
T Consensus 399 -------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 399 -------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred -------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 011234556788999999999999999999999874 6665443
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-40 Score=304.00 Aligned_cols=258 Identities=20% Similarity=0.272 Sum_probs=189.0
Q ss_pred CCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----chhhHHHHHHHHHhcccCCCCcc
Q psy12288 15 GGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----ADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 15 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
++..+...|..++ +|++.+.||+|+||.||+|.+..+++.||+|++...... .+.+.+|+.+++.+
T Consensus 22 ~~~~~~~~~~~~~-~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l--------- 91 (309)
T 2h34_A 22 DGTAESREGTQFG-PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL--------- 91 (309)
T ss_dssp ------------C-CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC---------
T ss_pred ccccccCCCcEec-cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc---------
Confidence 3334445555554 899999999999999999999999999999998754322 35577888888888
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeecc
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTD 169 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~d 169 (393)
.|+|++++++.+. .+...++|||++ +++|.+++... ..++...+..++.|++.||+|||++ |++|+|
T Consensus 92 -----~hp~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~d 159 (309)
T 2h34_A 92 -----QEPHVVPIHDFGE----IDGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA-GATHRD 159 (309)
T ss_dssp -----CCTTBCCEEEEEE----ETTEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSC
T ss_pred -----CCCCeeEEEEEEe----eCCeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCC
Confidence 7899999999887 466799999999 67999988765 3489999999999999999999998 999999
Q ss_pred CCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCC
Q psy12288 170 IKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEI 245 (393)
Q Consensus 170 lkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~ 245 (393)
|||+||+++.++ .++|+|||++...... .....
T Consensus 160 lkp~NIl~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~ 196 (309)
T 2h34_A 160 VKPENILVSADD-------------------------------------------FAYLVDFGIASATTDEKLTQLGNTV 196 (309)
T ss_dssp CCGGGEEECTTS-------------------------------------------CEEECSCCC----------------
T ss_pred CChHHEEEcCCC-------------------------------------------CEEEecCccCccccccccccccccC
Confidence 999999998766 4999999998765432 22456
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+|+.|+|||++.+..++.++||||||+++|+|++|+.||.... ...+..... ...+.
T Consensus 197 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~--~~~~~-------------- 253 (309)
T 2h34_A 197 GTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-------LSVMGAHIN--QAIPR-------------- 253 (309)
T ss_dssp CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-------HHHHHHHHH--SCCCC--------------
T ss_pred CCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHhc--cCCCC--------------
Confidence 8999999999998889999999999999999999999996433 111111111 11110
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-CHHHHhc
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-SAADCLR 382 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-t~~ell~ 382 (393)
....+...+..+.++|.+||..||.+|| +++++++
T Consensus 254 ----------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 254 ----------------------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp ----------------------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred ----------------------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 0012244567888999999999999999 8888775
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=296.07 Aligned_cols=246 Identities=17% Similarity=0.289 Sum_probs=196.6
Q ss_pred CCeEEEEE-EecccCceEEEEEEeC--CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 27 NFRYHVIR-KLGWGHFSTVWLSWDL--QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 27 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.++|.+.+ .||+|+||.||+|.+. .++..||+|+++... ...+.+.+|+.+++.+ .|+|++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~ 73 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL--------------DNPYIV 73 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC--------------CCCCEe
Confidence 35788877 9999999999999864 457789999997632 3346678999999999 789999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. ....++|||++ +++|.+++... ...+++..+..++.|++.||++||++ |++|+||||+||+++.+
T Consensus 74 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~ 146 (287)
T 1u59_A 74 RLIGVCQ-----AEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNR 146 (287)
T ss_dssp CEEEEEE-----SSSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEET
T ss_pred EEEEEec-----CCCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCC
Confidence 9998874 23489999999 67888887543 34589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE 254 (393)
+ .++|+|||++...... .....+|+.|+|||
T Consensus 147 ~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 183 (287)
T 1u59_A 147 H-------------------------------------------YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183 (287)
T ss_dssp T-------------------------------------------EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHH
T ss_pred C-------------------------------------------CEEECcccceeeeccCcceeeccccccccccccCHH
Confidence 6 5999999998765322 22335678899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
++.+..++.++||||||+++|+|++ |+.||..... ......+.. +.
T Consensus 184 ~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~i~~--~~------------------------- 230 (287)
T 1u59_A 184 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PEVMAFIEQ--GK------------------------- 230 (287)
T ss_dssp HHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT------HHHHHHHHT--TC-------------------------
T ss_pred HhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHhc--CC-------------------------
Confidence 9998889999999999999999998 9999975442 222111111 10
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...++...+..+.++|.+||..||.+||++.+++++
T Consensus 231 --------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 231 --------------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp --------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred --------------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011234566789999999999999999999999987
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-40 Score=306.45 Aligned_cols=268 Identities=20% Similarity=0.231 Sum_probs=203.6
Q ss_pred ccCCeeC-CeEEEEEEecccCceEEEEEE----eCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccC
Q psy12288 21 QIGDLFN-FRYHVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNT 94 (393)
Q Consensus 21 ~~~~~~~-~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~ 94 (393)
++++.+. ++|++.+.||+|+||.||+|+ +..+++.||+|++.... ...+.+.+|+.+++.+
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------------- 81 (327)
T 3lxl_A 15 QDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL------------- 81 (327)
T ss_dssp --CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-------------
T ss_pred ChhhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-------------
Confidence 4555664 799999999999999999998 56788999999987543 2345678999999998
Q ss_pred cccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 95 QASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 95 ~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+|++++++.+. .......++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ |++|+||||+
T Consensus 82 -~h~~i~~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~ 156 (327)
T 3lxl_A 82 -HSDFIVKYRGVSY--GPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAAR 156 (327)
T ss_dssp -CCTTBCCEEEEEE--CSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGG
T ss_pred -CCCceeEEEEEEe--cCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChh
Confidence 7899999988765 23566799999999 889998886643 3489999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCC
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQT 247 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t 247 (393)
||+++.++ .++|+|||++...... .....+|
T Consensus 157 NIl~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 193 (327)
T 3lxl_A 157 NILVESEA-------------------------------------------HVKIADFGLAKLLPLDKDYYVVREPGQSP 193 (327)
T ss_dssp GEEEEETT-------------------------------------------EEEECCGGGCEECCTTCSEEECSSCCCSC
T ss_pred hEEECCCC-------------------------------------------CEEEcccccceecccCCccceeeccCCcc
Confidence 99998877 5999999998765322 2334578
Q ss_pred CCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 248 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
..|+|||++.+..++.++||||||+++|+|++|..||..... ............+...
T Consensus 194 ~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~--------~~~~~~~~~~~~~~~~-------------- 251 (327)
T 3lxl_A 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA--------EFLRMMGCERDVPALS-------------- 251 (327)
T ss_dssp GGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH--------HHHHHCC----CCHHH--------------
T ss_pred ccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc--------hhhhhcccccccccHH--------------
Confidence 889999999998899999999999999999999999853221 0000000000000000
Q ss_pred CCeeeccCCCcchhHHHH--hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 328 GNFRRIDNLKPWGLYQVL--TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...... ......+...+..+.+||.+||..||.+|||++|++++
T Consensus 252 ------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 252 ------------RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp ------------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ------------HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000000 01112345667889999999999999999999999765
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=307.99 Aligned_cols=251 Identities=20% Similarity=0.323 Sum_probs=198.9
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
+...++|++.+.||+|+||.||+|.+. .+++.||+|.+..... ....+.+|+.+++.+ .
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~ 86 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF--------------N 86 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC--------------C
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc--------------C
Confidence 455679999999999999999999876 3577899999875432 234567888888888 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
|+|++++++.+. .+...++|||++ +++|.+++.... ...++...+..++.|++.||++||++ |++|
T Consensus 87 h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H 161 (322)
T 1p4o_A 87 CHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVH 161 (322)
T ss_dssp CTTBCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBC
T ss_pred CCCEeeeEEEEc----cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 899999998886 566789999999 679998886521 13468899999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FA 242 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~ 242 (393)
|||||+||+++.++ .++|+|||++...... ..
T Consensus 162 ~dikp~NIli~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~ 198 (322)
T 1p4o_A 162 RDLAARNCMVAEDF-------------------------------------------TVKIGDFGMTRDIYETDYYRKGG 198 (322)
T ss_dssp SCCSGGGEEECTTC-------------------------------------------CEEECCTTCCCGGGGGGCEEGGG
T ss_pred CCCccceEEEcCCC-------------------------------------------eEEECcCcccccccccccccccc
Confidence 99999999998765 4999999998755322 22
Q ss_pred CCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc
Q psy12288 243 DEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321 (393)
Q Consensus 243 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 321 (393)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+ .......+.. +..
T Consensus 199 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~--~~~------------ 258 (322)
T 1p4o_A 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFVME--GGL------------ 258 (322)
T ss_dssp SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHHHT--TCC------------
T ss_pred CCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC------HHHHHHHHHc--CCc------------
Confidence 3356888999999999989999999999999999999 899996543 1111111111 110
Q ss_pred cccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.|+++|
T Consensus 259 ---------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 259 ---------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp ---------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 01223456778899999999999999999999987
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-40 Score=300.34 Aligned_cols=245 Identities=18% Similarity=0.244 Sum_probs=188.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|+||.||+|.+ +++.||+|+++... ..+.+.+|+.+++.+ .|+|++++++.
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~E~~~l~~l--------------~h~~iv~~~~~ 82 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-TAQAFLAEASVMTQL--------------RHSNLVQLLGV 82 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC---HHHHHTHHHHTTC--------------CCTTBCCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-HHHHHHHHHHHHHhC--------------CCCCEeeEEEE
Confidence 36899999999999999999977 48899999987543 456788999999988 78999999987
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+.. .....++|||++ +++|.+++.......++...+..++.|++.||++||++ |++|+||||+||+++.++
T Consensus 83 ~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~---- 154 (278)
T 1byg_A 83 IVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDN---- 154 (278)
T ss_dssp ECC---C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTS----
T ss_pred EEc---CCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCC----
Confidence 641 344689999999 67999988765333378899999999999999999998 999999999999998665
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchh
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAA 265 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 265 (393)
.++|+|||++...........+++.|+|||.+.+..++.++
T Consensus 155 ---------------------------------------~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 195 (278)
T 1byg_A 155 ---------------------------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 195 (278)
T ss_dssp ---------------------------------------CEEECCCCC------------CCTTTSCHHHHHHCCCCHHH
T ss_pred ---------------------------------------cEEEeeccccccccccccCCCccccccCHHHhCCCCCCchh
Confidence 49999999988665555555678999999999999999999
Q ss_pred hHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHH
Q psy12288 266 DIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQV 344 (393)
Q Consensus 266 DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (393)
||||||+++|+|++ |..||..... ......+.. +.
T Consensus 196 Di~slG~il~~l~t~g~~p~~~~~~------~~~~~~~~~--~~------------------------------------ 231 (278)
T 1byg_A 196 DVWSFGILLWEIYSFGRVPYPRIPL------KDVVPRVEK--GY------------------------------------ 231 (278)
T ss_dssp HHHHHHHHHHHHHTTSCCSCTTSCG------GGHHHHHTT--TC------------------------------------
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhc--CC------------------------------------
Confidence 99999999999998 9999975441 111111100 00
Q ss_pred HhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 345 LTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
....+...+..+.++|.+||..||.+|||+.|+++
T Consensus 232 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 232 ---KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 01123455678899999999999999999999876
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=304.41 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=197.8
Q ss_pred eCCeEEEEEEecccCceEEEEEEeC-------CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDL-------QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... .....+.+|+.+++.+. .
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~ 99 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-------------K 99 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHC-------------C
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhh-------------c
Confidence 3579999999999999999999976 356789999987543 22356788999999983 6
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--------------KGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
|+||+++++.+. .....++||||+ +++|.+++..... ..++...+..++.|++.||+|||+
T Consensus 100 hp~iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 175 (334)
T 2pvf_A 100 HKNIINLLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175 (334)
T ss_dssp CTTBCCEEEEEC----SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEeeEEEEEc----cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999998876 566789999999 7799998876431 237889999999999999999999
Q ss_pred cCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-
Q psy12288 162 QCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH- 240 (393)
Q Consensus 162 ~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~- 240 (393)
+ |++||||||+||+++.++ .+||+|||++......
T Consensus 176 ~-~ivH~Dlkp~NIll~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~ 211 (334)
T 2pvf_A 176 Q-KCIHRDLAARNVLVTENN-------------------------------------------VMKIADFGLARDINNID 211 (334)
T ss_dssp T-TEECSCCSGGGEEECTTC-------------------------------------------CEEECCCTTCEECTTTS
T ss_pred C-CeeCCCCccceEEEcCCC-------------------------------------------CEEEccccccccccccc
Confidence 8 999999999999997666 4999999998765432
Q ss_pred ----CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHh
Q psy12288 241 ----FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315 (393)
Q Consensus 241 ----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 315 (393)
.....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.+ .......+.. +.
T Consensus 212 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~--~~------- 276 (334)
T 2pvf_A 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLKE--GH------- 276 (334)
T ss_dssp SEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHH--TC-------
T ss_pred cccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------HHHHHHHHhc--CC-------
Confidence 233456788999999999889999999999999999999 999997544 2222211111 00
Q ss_pred cCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.|++++
T Consensus 277 --------------------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 277 --------------------------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp --------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --------------------------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 011223456788999999999999999999999875
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=301.81 Aligned_cols=252 Identities=19% Similarity=0.248 Sum_probs=198.8
Q ss_pred eCCeEEEEEEecccCceEEEEEEe-----CCCCceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWD-----LQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
..++|++.+.||+|+||.||+|.+ ..+++.||+|++..... ....+.+|+.+++.+. .|+
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~hp 91 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-------------HHL 91 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-------------CCT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc-------------cCC
Confidence 357999999999999999999984 45678999999875432 2346788999999983 578
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--------------KGIHIQNVRTIIKQVLEGLNYLHTQC 163 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~l~~~~~~~i~~ql~~~l~~lH~~~ 163 (393)
|++++++.+.. .+...++||||+ +++|.+++..... ..++...+..++.|++.||.|||++
T Consensus 92 ~iv~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~- 167 (316)
T 2xir_A 92 NVVNLLGACTK---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR- 167 (316)
T ss_dssp TBCCEEEEECC---TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CeeeEEEEEec---CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-
Confidence 99999988752 345689999999 6799998876432 1278899999999999999999998
Q ss_pred CeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---
Q psy12288 164 RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--- 240 (393)
Q Consensus 164 ~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--- 240 (393)
|++||||||+||+++.++ .++|+|||++......
T Consensus 168 ~i~H~dikp~Nil~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~ 204 (316)
T 2xir_A 168 KCIHRDLAARNILLSEKN-------------------------------------------VVKICDFGLARDIYKDPDY 204 (316)
T ss_dssp TCCCSCCSGGGEEECGGG-------------------------------------------CEEECCCGGGSCTTTCTTS
T ss_pred CcccccCccceEEECCCC-------------------------------------------CEEECCCccccccccCccc
Confidence 999999999999998666 4999999998765332
Q ss_pred --CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcC
Q psy12288 241 --FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317 (393)
Q Consensus 241 --~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 317 (393)
.....+|+.|+|||++.+..++.++||||||+++|+|++ |..||...... ..+.........
T Consensus 205 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~~~~~~~--------- 269 (316)
T 2xir_A 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTR--------- 269 (316)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS------HHHHHHHHHTCC---------
T ss_pred eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh------HHHHHHhccCcc---------
Confidence 123356788999999999999999999999999999998 99999754421 111111111100
Q ss_pred cccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.|+++|
T Consensus 270 -------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 270 -------------------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp -------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11223456678899999999999999999999986
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=306.35 Aligned_cols=264 Identities=21% Similarity=0.226 Sum_probs=202.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
..++|++.+.||+|+||.||+|.+. +++.||+|.+.... ...+.+.+|+.+++.+ .|+|+++++
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~ 101 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFC--------------RHPHLVSLI 101 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSC--------------CCTTBCCEE
T ss_pred HHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhC--------------CCCCEeeEE
Confidence 4569999999999999999999864 68899999876542 2345678888888877 799999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+.+. .....++||||+ +++|.+.+..... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 102 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~ 176 (321)
T 2qkw_B 102 GFCD----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENF 176 (321)
T ss_dssp EECC----CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTC
T ss_pred EEEc----CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCC
Confidence 9886 566789999999 6788887754332 2488999999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVL 256 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~ 256 (393)
.+||+|||++...... .....||+.|+|||++
T Consensus 177 -------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 213 (321)
T 2qkw_B 177 -------------------------------------------VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYF 213 (321)
T ss_dssp -------------------------------------------CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHH
T ss_pred -------------------------------------------CEEEeecccccccccccccccccccCCCccccCHHHh
Confidence 4999999998754321 1233578999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+..++.++||||||+++|+|++|+.||......+.......... ....+... ....+ .
T Consensus 214 ~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------~~~~~---------~ 272 (321)
T 2qkw_B 214 IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE-SHNNGQLE-----------QIVDP---------N 272 (321)
T ss_dssp HHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHH-HHTTTCCC-----------SSSSS---------S
T ss_pred cCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhh-ccccccHH-----------HhcCh---------h
Confidence 999999999999999999999999999986654433221111000 00000000 00000 0
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.....+...+..+.+++.+||..||++|||+.|++++
T Consensus 273 ----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 273 ----------LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp ----------CTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----------hccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0012345778899999999999999999999999976
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=303.55 Aligned_cols=248 Identities=20% Similarity=0.250 Sum_probs=195.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceE--EEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFV--ALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--aiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|.+..++..+ |+|.++.. ......+.+|+.+++.+. .|+|++++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~hp~iv~~ 91 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-------------HHPNIINL 91 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC-------------CCTTBCCE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhcc-------------CCCchhhh
Confidence 47999999999999999999999888865 99988742 233466788999888873 68999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
++.+. .....++|||++ +++|.+++.... ...++...+..++.|++.||+|||++ |++||
T Consensus 92 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~ 166 (327)
T 1fvr_A 92 LGACE----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHR 166 (327)
T ss_dssp EEEEE----ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred ceeee----eCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCC
Confidence 99887 566799999999 779999886542 23589999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~ 246 (393)
||||+||+++.++ .++|+|||++...... .....+
T Consensus 167 dlkp~NIl~~~~~-------------------------------------------~~kL~Dfg~~~~~~~~~~~~~~~~ 203 (327)
T 1fvr_A 167 DLAARNILVGENY-------------------------------------------VAKIADFGLSRGQEVYVKKTMGRL 203 (327)
T ss_dssp CCSGGGEEECGGG-------------------------------------------CEEECCTTCEESSCEECCC----C
T ss_pred CCccceEEEcCCC-------------------------------------------eEEEcccCcCccccccccccCCCC
Confidence 9999999998766 4999999998754322 233456
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
++.|+|||++.+..++.++||||||+++|+|++ |..||.+.+ .......+.. +.
T Consensus 204 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~--~~----------------- 258 (327)
T 1fvr_A 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQ--GY----------------- 258 (327)
T ss_dssp CTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHGGG--TC-----------------
T ss_pred CccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc------HHHHHHHhhc--CC-----------------
Confidence 889999999998889999999999999999998 999997544 1111111100 00
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||++|++++
T Consensus 259 ----------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 259 ----------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp ----------------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 011223456788999999999999999999999876
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=296.19 Aligned_cols=247 Identities=13% Similarity=0.155 Sum_probs=192.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
-++|++.+.||+|+||.||+|.+. ++.||+|+++.... ..+.+.+|+.+++.+ .|+|++++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~ 72 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF--------------SHPNVLPV 72 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC--------------SCTTEECE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhc--------------CCCchhhe
Confidence 358999999999999999999884 88899999875432 234466777776666 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCceEEeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENILMCVD 180 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NIl~~~~ 180 (393)
++.+.. ......++||||+ +++|.+++.......+++..+..++.|++.||+|||++ + ++||||||+||+++.+
T Consensus 73 ~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~ 149 (271)
T 3kmu_A 73 LGACQS--PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDED 149 (271)
T ss_dssp EEEECT--TTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTT
T ss_pred EEEEcc--CCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCC
Confidence 998762 2236789999999 67999999876544689999999999999999999998 9 9999999999999876
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCC
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 260 (393)
+ .++++||++.... ......+|+.|+|||++.+..
T Consensus 150 ~-------------------------------------------~~~l~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~ 184 (271)
T 3kmu_A 150 M-------------------------------------------TARISMADVKFSF--QSPGRMYAPAWVAPEALQKKP 184 (271)
T ss_dssp S-------------------------------------------CEEEEGGGSCCTT--SCTTCBSCGGGSCHHHHHSCG
T ss_pred c-------------------------------------------ceeEEeccceeee--cccCccCCccccChhhhccCC
Confidence 6 3677777665432 223456799999999998765
Q ss_pred CCc---hhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 261 YGP---AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 261 ~~~---~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
++. ++||||||+++|+|++|+.||...+ .......+.. .+..
T Consensus 185 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~-~~~~---------------------------- 229 (271)
T 3kmu_A 185 EDTNRRSADMWSFAVLLWELVTREVPFADLS------NMEIGMKVAL-EGLR---------------------------- 229 (271)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC------HHHHHHHHHH-SCCC----------------------------
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCccccC------hHHHHHHHHh-cCCC----------------------------
Confidence 443 8999999999999999999997544 2222111111 1110
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..++...+..+.++|.+||..||.+|||++|+++.
T Consensus 230 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 230 -----------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp -----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11234566789999999999999999999999864
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=311.21 Aligned_cols=270 Identities=20% Similarity=0.240 Sum_probs=201.2
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.....++|++.+.||+|+||.||+|.+. +++.||+|++.... .....+.+|+.+++.+ .|+|+
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 89 (326)
T 3uim_A 25 LQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMA--------------VHRNL 89 (326)
T ss_dssp HHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTC--------------CCTTB
T ss_pred HHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhc--------------cCCCc
Confidence 3445679999999999999999999744 68899999987543 2234678898888887 79999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhhhcC--CeeeccCCCCce
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY--KGIHIQNVRTIIKQVLEGLNYLHTQC--RIIHTDIKPENI 175 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--~~l~~~~~~~i~~ql~~~l~~lH~~~--~i~H~dlkp~NI 175 (393)
+++++.+. .....++||||+ +++|.+.+..... ..+++..+..++.|++.||+|||+++ |++||||||+||
T Consensus 90 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Ni 165 (326)
T 3uim_A 90 LRLRGFCM----TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 165 (326)
T ss_dssp CCCCEEEC----CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGE
T ss_pred cceEEEEe----cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhE
Confidence 99999887 566788999999 7799988876432 23889999999999999999999854 899999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCc
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYR 251 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~ 251 (393)
+++.++ .++|+|||++...... .....||+.|+
T Consensus 166 l~~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~ 202 (326)
T 3uim_A 166 LLDEEF-------------------------------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 202 (326)
T ss_dssp EECTTC-------------------------------------------CEEECCCSSCEECCSSSSCEECCCCSCGGGC
T ss_pred EECCCC-------------------------------------------CEEeccCccccccCcccccccccccCCcCcc
Confidence 998765 4999999998765322 23345899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCee
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFR 331 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (393)
|||++.+..++.++||||||+++|+|++|..||......... ...... .+.+.... ....
T Consensus 203 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~---~~~~~~~~----------------~~~~ 262 (326)
T 3uim_A 203 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD-DVMLLD---WVKGLLKE----------------KKLE 262 (326)
T ss_dssp CHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS-CSBHHH---HHTTTTSS----------------CCST
T ss_pred CHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc-chhHHH---HHHHHhhc----------------hhhh
Confidence 999999988999999999999999999999999521100000 000000 00000000 0000
Q ss_pred eccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 332 RIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.... ......++...+..+.+++.+||..||.+|||++|+++|
T Consensus 263 ~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 305 (326)
T 3uim_A 263 ALVD---------VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305 (326)
T ss_dssp TSSC---------TTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred hhcC---------hhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence 0000 001122456778899999999999999999999999988
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=303.79 Aligned_cols=277 Identities=17% Similarity=0.207 Sum_probs=191.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.+.||+|+||.||+|.. +++.||||++.... ...+..|..++... ...|+|++++++.+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~------------~~~h~~i~~~~~~~ 76 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN--RQNFINEKNIYRVP------------LMEHDNIARFIVGD 76 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG--HHHHHHHHHHHTST------------TCCCTTBCCEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc--hhhHHHHHHHHHHH------------hccCcchhhheecc
Confidence 5799999999999999999966 68899999987543 23334444333321 12799999998766
Q ss_pred eeec-CCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------CeeeccCCCCceEE
Q psy12288 108 KIYS-RNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQC--------RIIHTDIKPENILM 177 (393)
Q Consensus 108 ~~~~-~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~--------~i~H~dlkp~NIl~ 177 (393)
.... .....+++||||+ +++|.+++.... .+...+..++.|++.||+|||+.+ |++||||||+|||+
T Consensus 77 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill 153 (336)
T 3g2f_A 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV 153 (336)
T ss_dssp EEECTTSCEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE
T ss_pred cccccCCCceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE
Confidence 5433 3455789999999 789999886643 688899999999999999999743 89999999999999
Q ss_pred eechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----------CCCCCC
Q psy12288 178 CVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----------FADEIQ 246 (393)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----------~~~~~~ 246 (393)
+.++ .+||+|||++...... .....|
T Consensus 154 ~~~~-------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~g 190 (336)
T 3g2f_A 154 KNDG-------------------------------------------TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190 (336)
T ss_dssp CTTS-------------------------------------------CEEECCCTTCEECSSSSCC---------CCTTS
T ss_pred cCCC-------------------------------------------cEEEeeccceeecccccccCccccccccccCCC
Confidence 8765 4999999999765321 223468
Q ss_pred CCCCchhHHHhc-------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh-HHHhcCc
Q psy12288 247 TRQYRSVEVLIG-------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK-EVLSQGK 318 (393)
Q Consensus 247 t~~y~aPE~~~~-------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~-~~~~~~~ 318 (393)
|+.|+|||++.+ ..++.++|||||||++|+|++|..||............. ....+..|. .......
T Consensus 191 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 265 (336)
T 3g2f_A 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF-----QTEVGNHPTFEDMQVLV 265 (336)
T ss_dssp CGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT-----HHHHCSSCCHHHHHHHH
T ss_pred ccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh-----hcccCCCchHHHHHhhh
Confidence 999999999987 345678999999999999999977664433222111110 011111111 1100000
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHH------hcCCCCCCC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC------LRHPWLNPR 389 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~ 389 (393)
.. .......+ ....-....+..+.+||.+||..||++|||++|+ +.++|-++-
T Consensus 266 ~~------~~~~~~~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~ 324 (336)
T 3g2f_A 266 SR------EKQRPKFP------------EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK 324 (336)
T ss_dssp TT------SCCCCCCC------------TTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred cc------cccCCCCC------------cccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence 00 00000000 0001123467789999999999999999999999 556777664
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=301.18 Aligned_cols=276 Identities=19% Similarity=0.251 Sum_probs=197.1
Q ss_pred CCCCccccccCCee---------CCeEEEEEEecccCceEEEEEE----eCCCCceEEEEEEeccc-ccchhhHHHHHHH
Q psy12288 13 RPGGYCPVQIGDLF---------NFRYHVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQ-VYADTARDEIVLL 78 (393)
Q Consensus 13 ~~~~~~~~~~~~~~---------~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l 78 (393)
+..-|.|...++.+ .++|++.+.||+|+||.||+|. +..+++.||+|++.... ...+.+.+|+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l 96 (326)
T 2w1i_A 17 TENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 96 (326)
T ss_dssp --------------------CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccCccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHH
Confidence 33445555555554 3469999999999999999998 46679999999987542 2345678999999
Q ss_pred HHhcccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q psy12288 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLN 157 (393)
Q Consensus 79 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~ 157 (393)
+.+ .|+|++++++.+... .....++|||++ +++|.+++.... ..++...+..++.|++.||+
T Consensus 97 ~~l--------------~h~~iv~~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~ 159 (326)
T 2w1i_A 97 KSL--------------QHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGME 159 (326)
T ss_dssp HTC--------------CCTTBCCEEEEECC------CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHH
T ss_pred HhC--------------CCCCeeeEEEEEEec--CCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHH
Confidence 998 789999998877522 234689999999 679999887653 45899999999999999999
Q ss_pred HhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccc
Q psy12288 158 YLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWI 237 (393)
Q Consensus 158 ~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~ 237 (393)
+||++ |++|+||||+||+++.++ .++|+|||++...
T Consensus 160 ~LH~~-~ivH~dikp~NIli~~~~-------------------------------------------~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 160 YLGTK-RYIHRDLATRNILVENEN-------------------------------------------RVKIGDFGLTKVL 195 (326)
T ss_dssp HHHHT-TEECSCCCGGGEEEEETT-------------------------------------------EEEECCCTTCEEC
T ss_pred HHHhC-CEeccCCCcceEEEcCCC-------------------------------------------cEEEecCcchhhc
Confidence 99998 999999999999998776 5999999998765
Q ss_pred cCC------CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCCh
Q psy12288 238 DDH------FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPK 311 (393)
Q Consensus 238 ~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~ 311 (393)
... .....++..|+|||.+.+..++.++||||||+++|+|++|..||.... .......+..+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~-----------~~~~~~~~~~~~ 264 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP-----------AEFMRMIGNDKQ 264 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-----------HHHHHHHCTTCC
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH-----------HHHHHhhccccc
Confidence 432 223456778999999999889999999999999999999998885211 111111111110
Q ss_pred HHHhcCcccccccCCCCCeeeccCCCcchhHHHHh--hhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 312 EVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLT--EKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..... ......+. ...+.+...+..+.++|++||..||.+|||+.|+++
T Consensus 265 ~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 265 GQMIV----------------------FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp THHHH----------------------HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhhH----------------------HHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00000 00000000 011233556778999999999999999999999885
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=304.98 Aligned_cols=262 Identities=24% Similarity=0.318 Sum_probs=197.3
Q ss_pred CeeCCeE-EEEEEecccCceEEEEEE----eCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 24 DLFNFRY-HVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 24 ~~~~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.++.++| +++++||+|+||.||+|. +..+++.||||++.... .....+.+|+.+++.+ .
T Consensus 26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~ 91 (318)
T 3lxp_A 26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL--------------Y 91 (318)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC--------------C
T ss_pred ceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC--------------C
Confidence 3455566 999999999999998875 34468899999998543 2345678999999999 7
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+|++++++.+... ....+++||||+ +++|.+++... .+++..+..++.|++.||++||++ |++|+||||+||
T Consensus 92 h~~iv~~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Ni 165 (318)
T 3lxp_A 92 HEHIIKYKGCCEDA--GAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNV 165 (318)
T ss_dssp CTTBCCEEEEEEET--TTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGE
T ss_pred CcchhhEEEEEecC--CCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheE
Confidence 99999999988632 356789999999 67988888654 389999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCC
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQ 249 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~ 249 (393)
+++.++ .++|+|||++...... .....+|..
T Consensus 166 l~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~ 202 (318)
T 3lxp_A 166 LLDNDR-------------------------------------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 202 (318)
T ss_dssp EECTTC-------------------------------------------CEEECCGGGCEECCTTCSEEEC---CCCCGG
T ss_pred EEcCCC-------------------------------------------CEEECCccccccccccccccccccCCCCCce
Confidence 997766 4999999998765432 233457888
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGN 329 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 329 (393)
|+|||++.+..++.++||||||+++|+|++|..||..... ......+.........
T Consensus 203 y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~------------- 258 (318)
T 3lxp_A 203 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT-----------KFLELIGIAQGQMTVL------------- 258 (318)
T ss_dssp GCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-----------HHHHHHCSCCHHHHHH-------------
T ss_pred eeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccch-----------hhhhhhcccccchhHH-------------
Confidence 9999999998899999999999999999999999853210 0011111100000000
Q ss_pred eeeccCCCcchhHHHH--hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 330 FRRIDNLKPWGLYQVL--TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 330 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...... ......+...+..+.+||++||..||.+|||++|+++
T Consensus 259 ----------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 259 ----------RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp ----------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----------HHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 000000 0112234566788999999999999999999999985
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=301.63 Aligned_cols=254 Identities=24% Similarity=0.271 Sum_probs=197.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+++|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.+ .|+|++++++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~~~ 93 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF--------------NHPNILRLVA 93 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC--------------CCTTBCCCCE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc--------------CCCCeeeEEE
Confidence 57999999999999999999999999999999987643 33456678899999988 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
.+..........++||||+ +++|.+.+... ....+++.++..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~- 171 (317)
T 2buj_A 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEG- 171 (317)
T ss_dssp EEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTS-
T ss_pred EEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCC-
Confidence 8875555667899999999 66998888652 234589999999999999999999998 999999999999997666
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------------CCCCCCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------------ADEIQTRQY 250 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------------~~~~~t~~y 250 (393)
.++|+|||++....... ....||+.|
T Consensus 172 ------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 209 (317)
T 2buj_A 172 ------------------------------------------QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209 (317)
T ss_dssp ------------------------------------------CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGG
T ss_pred ------------------------------------------CEEEEecCcchhcccccccccccccccccccccCCccc
Confidence 49999999876543211 123468999
Q ss_pred chhHHHhcCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCC
Q psy12288 251 RSVEVLIGAG---YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327 (393)
Q Consensus 251 ~aPE~~~~~~---~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 327 (393)
+|||++.+.. ++.++||||||+++|+|++|+.||........ .+..... ..
T Consensus 210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~--~~------------------- 263 (317)
T 2buj_A 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-----SVALAVQ--NQ------------------- 263 (317)
T ss_dssp CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-----CHHHHHH--CC-------------------
T ss_pred CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-----hhhHHhh--cc-------------------
Confidence 9999987654 68899999999999999999999942110000 0000000 00
Q ss_pred CCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+.+...+..+.++|.+||..||.+|||+.+++++
T Consensus 264 -------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 264 -------------------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp ---------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 0011123456788999999999999999999999986
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=294.76 Aligned_cols=244 Identities=17% Similarity=0.255 Sum_probs=193.0
Q ss_pred CCeEEEEE-EecccCceEEEEEE--eCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIR-KLGWGHFSTVWLSW--DLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~-~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.+ .||+|+||.||+|. ...+++.||+|++..... ..+.+.+|+.+++.+ .|+|+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 80 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL--------------DNPYI 80 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC--------------CCTTB
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC--------------CCCCE
Confidence 35899999 99999999999994 456678999999875432 245678899999998 78999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. ....++|||++ +++|.+++... ..++...+..++.|++.||+|||++ |++|+||||+||+++.
T Consensus 81 ~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~ 152 (291)
T 1xbb_A 81 VRMIGICE-----AESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVT 152 (291)
T ss_dssp CCEEEEEE-----SSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEE
T ss_pred EEEEEEEC-----CCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeC
Confidence 99998773 34578999999 68999888765 3489999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSV 253 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aP 253 (393)
++ .++|+|||++...... .....+|+.|+||
T Consensus 153 ~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 189 (291)
T 1xbb_A 153 QH-------------------------------------------YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 189 (291)
T ss_dssp TT-------------------------------------------EEEECCCTTCEECCTTCSEEEC----CCCGGGCCH
T ss_pred CC-------------------------------------------cEEEccCCcceeeccCCCcccccccCCCCceeeCh
Confidence 76 4999999998765432 2223457889999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|.+.+..++.++||||||+++|+|++ |+.||...+ .......+.. +.
T Consensus 190 E~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~--~~------------------------ 237 (291)
T 1xbb_A 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEK--GE------------------------ 237 (291)
T ss_dssp HHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TC------------------------
T ss_pred HHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--CC------------------------
Confidence 99998888999999999999999999 999997544 1111111110 10
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...++...+..+.++|.+||..||.+||++.++++
T Consensus 238 ---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 238 ---------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp ---------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01123455678899999999999999999999875
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=321.87 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=204.4
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
..++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+.+|+.+ .|+||+++++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l--------------~hpniv~~~~ 329 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL--------------RHEKLVQLYA 329 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHC--------------CCTTBCCEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhC--------------CCCCEeeEEE
Confidence 35789999999999999999998875 45699999987665667889999999999 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+. . ...++||||+ +++|.+++.......++..++..++.||+.||+|||++ +++||||||+|||++.++
T Consensus 330 ~~~----~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~--- 400 (535)
T 2h8h_A 330 VVS----E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENL--- 400 (535)
T ss_dssp EEC----S-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGG---
T ss_pred EEe----e-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCC---
Confidence 764 2 4588999999 78999998654334588999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhHHHhcCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAG 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~ 260 (393)
.+||+|||+++.... ......++..|+|||++....
T Consensus 401 ----------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 440 (535)
T 2h8h_A 401 ----------------------------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 440 (535)
T ss_dssp ----------------------------------------CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCC
T ss_pred ----------------------------------------cEEEcccccceecCCCceecccCCcCcccccCHHHhccCC
Confidence 499999999976542 123345678899999999999
Q ss_pred CCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 261 YGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
++.++|||||||++|+|++ |..||.+.. ..+.+..+.. +.
T Consensus 441 ~~~~sDvwSlGv~l~el~t~g~~P~~~~~------~~~~~~~i~~--~~------------------------------- 481 (535)
T 2h8h_A 441 FTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVER--GY------------------------------- 481 (535)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTCCSSTTCC------HHHHHHHHHT--TC-------------------------------
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC-------------------------------
Confidence 9999999999999999999 999997544 2222221111 10
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC--CCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH--PWLNPRR 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h--p~~~~~~ 390 (393)
....+..++..+.+||.+||..||++|||+++|++. .+|....
T Consensus 482 --------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 482 --------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 011234556788999999999999999999999875 5655443
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=301.59 Aligned_cols=247 Identities=17% Similarity=0.254 Sum_probs=190.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC----ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK----TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
..+|++.+.||+|+||.||+|.+..++ ..||+|++.... .....+.+|+.+++.+ .|+|+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i 108 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF--------------SHHNI 108 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC--------------CCTTB
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC--------------CCCCC
Confidence 468999999999999999999887653 359999987542 2234577899999988 79999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. .....++|||++ +++|.+++.... ..++...+..++.|++.||++||++ |++||||||+||+++.
T Consensus 109 v~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~ 182 (333)
T 1mqb_A 109 IRLEGVIS----KYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNS 182 (333)
T ss_dssp CCEEEEEC----SSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT
T ss_pred CcEEEEEe----cCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECC
Confidence 99998886 566799999999 678888886543 4589999999999999999999998 9999999999999976
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSV 253 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aP 253 (393)
++ .++|+|||++...... .....+|+.|+||
T Consensus 183 ~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 219 (333)
T 1mqb_A 183 NL-------------------------------------------VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219 (333)
T ss_dssp TC-------------------------------------------CEEECCCCC-----------------CCCGGGSCH
T ss_pred CC-------------------------------------------cEEECCCCcchhhccccccccccCCCCccccccCc
Confidence 65 4999999998765432 1123457789999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++.+..++.++||||||+++|+|++ |..||...+ .......+.. +.
T Consensus 220 E~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~--~~------------------------ 267 (333)
T 1mqb_A 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS------NHEVMKAIND--GF------------------------ 267 (333)
T ss_dssp HHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHT--TC------------------------
T ss_pred hhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHC--CC------------------------
Confidence 99999889999999999999999998 999996544 2222211111 00
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.++|.+||..||.+||++.+++++
T Consensus 268 ---------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 268 ---------------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp ---------------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ---------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011223456788899999999999999999998864
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-40 Score=311.87 Aligned_cols=246 Identities=17% Similarity=0.263 Sum_probs=186.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
.++|++.+.||+|+||.||+|++. .++..||||.++... .....+.+|+.+++.+ .|+||+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~niv 109 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF--------------DHPNII 109 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC--------------CCTTBC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC--------------CCCCCC
Confidence 468999999999999999999877 456789999987532 2345678899999888 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .....++||||+ +++|.+++.... ..++..++..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 110 ~~~~~~~----~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~ 183 (373)
T 2qol_A 110 RLEGVVT----KSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSN 183 (373)
T ss_dssp CEEEEEC----SSSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred eEEEEEe----eCCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCC
Confidence 9999886 566789999999 789988886543 4589999999999999999999998 99999999999999776
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC------CCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF------ADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~t~~y~aPE 254 (393)
+ .+||+|||++....... ....+|..|+|||
T Consensus 184 ~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE 220 (373)
T 2qol_A 184 L-------------------------------------------VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220 (373)
T ss_dssp C-------------------------------------------CEEECCC----------------------CTTSCHH
T ss_pred C-------------------------------------------CEEECcCccccccccCCccceeccCCCcCCCccChh
Confidence 6 49999999987654321 1223467899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
++.+..++.++||||||+++|+|++ |+.||...+ .......+.. +.
T Consensus 221 ~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~------~~~~~~~i~~--~~------------------------- 267 (373)
T 2qol_A 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS------NQDVIKAVDE--GY------------------------- 267 (373)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC------HHHHHHHHHT--TE-------------------------
T ss_pred hhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC-------------------------
Confidence 9999999999999999999999998 999997544 2222111111 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.++|.+||..||.+||++.|+++
T Consensus 268 --------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 268 --------------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp --------------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 01112345678899999999999999999999875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=297.05 Aligned_cols=259 Identities=20% Similarity=0.216 Sum_probs=188.9
Q ss_pred CCccccccCCee--CCeEEEEEEecccCceEEEEEEeCC-CCc--eEEEEEEecc----cccchhhHHHHHHHHHhcccC
Q psy12288 15 GGYCPVQIGDLF--NFRYHVIRKLGWGHFSTVWLSWDLQ-DKT--FVALKIVKSD----QVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 15 ~~~~~~~~~~~~--~~~y~~~~~lg~G~~g~V~~~~~~~-~~~--~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~ 85 (393)
+|..|......+ .++|++.+.||+|+||.||+|.+.. +++ .||+|+++.. ....+.+.+|+.+++.+
T Consensus 3 ~g~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---- 78 (291)
T 1u46_A 3 AGEGPLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL---- 78 (291)
T ss_dssp --------CCEECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC----
T ss_pred CCCccccccccccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC----
Confidence 455555444433 5699999999999999999998643 333 6899988643 22346678899999998
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
.|+|++++++.+. .. ..++|||++ +++|.+.+.... ..++...+..++.|++.||++||++ |
T Consensus 79 ----------~h~~i~~~~~~~~----~~-~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~ 141 (291)
T 1u46_A 79 ----------DHRNLIRLYGVVL----TP-PMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK-R 141 (291)
T ss_dssp ----------CCTTBCCEEEEEC----SS-SCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred ----------CCCCcccEEEEEc----cC-CceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC-C
Confidence 7999999998876 22 278999999 789998887643 3488999999999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---- 240 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---- 240 (393)
++|+||||+||+++.++ .++|+|||++......
T Consensus 142 i~H~dikp~Nili~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~ 178 (291)
T 1u46_A 142 FIHRDLAARNLLLATRD-------------------------------------------LVKIGDFGLMRALPQNDDHY 178 (291)
T ss_dssp EECSCCCGGGEEEEETT-------------------------------------------EEEECCCTTCEECCC-CCEE
T ss_pred cccCCCchheEEEcCCC-------------------------------------------CEEEccccccccccccccch
Confidence 99999999999998776 5999999998765432
Q ss_pred --CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcC
Q psy12288 241 --FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317 (393)
Q Consensus 241 --~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 317 (393)
.....+|..|+|||++.+..++.++||||||+++|+|++ |..||...+ ....+..+......
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~~~~--------- 243 (291)
T 1u46_A 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILHKIDKEGER--------- 243 (291)
T ss_dssp EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTSCCC---------
T ss_pred hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC------HHHHHHHHHccCCC---------
Confidence 123456778999999999888999999999999999999 999997554 22222222110000
Q ss_pred cccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 318 KKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.+++++
T Consensus 244 -------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 244 -------------------------------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp -------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------------------------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 01123456788999999999999999999999874
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=297.55 Aligned_cols=252 Identities=19% Similarity=0.211 Sum_probs=188.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC---CCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ---DKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++|++.+.||+|+||.||+|.... ++..||+|.+..... ..+.+.+|+.+++.+ .|+|+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l--------------~h~~i 98 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF--------------SHPNV 98 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC--------------CCTTB
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC--------------CCCCe
Confidence 4689999999999999999998765 456899999875422 235578899999998 79999
Q ss_pred eeccccceeecCC-CeEEEEEEeec-cccHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 101 IRLLNDFKIYSRN-GTHICMVFEVM-GYNLLRLIARS----DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 101 ~~~~~~~~~~~~~-~~~~~iv~e~~-~~~l~~~~~~~----~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
+++++.+...... ....++|||++ +++|.+++... ....+++..+..++.|++.||.|||++ |++||||||+|
T Consensus 99 v~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~N 177 (313)
T 3brb_A 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARN 177 (313)
T ss_dssp CCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGG
T ss_pred eeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcce
Confidence 9999988743221 23569999999 67998887432 234589999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCC
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQ 249 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~ 249 (393)
|+++.++ .++|+|||++...... .....+++.
T Consensus 178 Ili~~~~-------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 214 (313)
T 3brb_A 178 CMLRDDM-------------------------------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214 (313)
T ss_dssp EEECTTS-------------------------------------------CEEECSCSCC----------------CCGG
T ss_pred EEEcCCC-------------------------------------------cEEEeecCcceecccccccCcccccCCCcc
Confidence 9998765 4999999998765322 123356788
Q ss_pred CchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|+|||.+.+..++.++||||||+++|+|++ |..||..... ......+.. +.
T Consensus 215 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~--~~-------------------- 266 (313)
T 3brb_A 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN------HEMYDYLLH--GH-------------------- 266 (313)
T ss_dssp GSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHHHHT--TC--------------------
T ss_pred ccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHHc--CC--------------------
Confidence 999999999999999999999999999999 8999975542 111111111 10
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.+++++
T Consensus 267 -------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 267 -------------------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp -------------------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred -------------------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011223456788999999999999999999999875
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=295.20 Aligned_cols=247 Identities=19% Similarity=0.278 Sum_probs=190.4
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC---ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK---TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+|++.++||+|+||.||+|.+..++ ..||+|.+.... ...+.+.+|+.+++.+ .|+|+++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~ 90 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF--------------SHPNVLS 90 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC--------------CCTTBCC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC--------------CCCCEee
Confidence 48999999999999999999876543 358999887432 2345678899999998 7999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+.. .+...++||||+ +++|.+++.... ..++...+..++.|++.||++||++ |++||||||+||+++.++
T Consensus 91 ~~~~~~~---~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~ 165 (298)
T 3f66_A 91 LLGICLR---SEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKF 165 (298)
T ss_dssp CCEEECC---SSSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTC
T ss_pred eeeEEEc---CCCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCC
Confidence 9987541 455688999999 669988886533 4588999999999999999999998 999999999999997665
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVE 254 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE 254 (393)
.++|+|||++...... .....+|+.|+|||
T Consensus 166 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE 202 (298)
T 3f66_A 166 -------------------------------------------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202 (298)
T ss_dssp -------------------------------------------CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHH
T ss_pred -------------------------------------------CEEECcccccccccccchhccccccCCCCCccccChH
Confidence 4999999998755321 22345678899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
.+.+..++.++||||||+++|+|++ |.+||...+..+ ....+.. +.
T Consensus 203 ~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~------~~~~~~~--~~------------------------- 249 (298)
T 3f66_A 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD------ITVYLLQ--GR------------------------- 249 (298)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT------HHHHHHT--TC-------------------------
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH------HHHHHhc--CC-------------------------
Confidence 9999999999999999999999999 666775544221 1111111 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||++|+++.
T Consensus 250 --------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 250 --------------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp --------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001123345678899999999999999999998864
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-39 Score=304.23 Aligned_cols=211 Identities=19% Similarity=0.206 Sum_probs=168.3
Q ss_pred eCCeEEEEEEecccCceEEEEE-----EeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLS-----WDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~-----~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
-.++|++.++||+|+||.||+| .+..+++.||+|++... ....+..|..+++.+.+ ..|+++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~-----------~~~~~i 129 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKP-----------SMQHMF 129 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCG-----------GGGGGB
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhh-----------hhhhhh
Confidence 3579999999999999999999 46778999999998754 35667888999988842 258899
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS---DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~---~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
+++++.+. ..+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ ||+||||||+|||
T Consensus 130 v~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIl 204 (365)
T 3e7e_A 130 MKFYSAHL----FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFI 204 (365)
T ss_dssp CCEEEEEE----CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEE
T ss_pred hhhheeee----cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEE
Confidence 99998887 566789999999 78999988642 234589999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc-----CCCCCCCCCCCCc
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID-----DHFADEIQTRQYR 251 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~-----~~~~~~~~t~~y~ 251 (393)
++.+.... .........+||+|||+++... ......+||+.|+
T Consensus 205 l~~~~~~~--------------------------------~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~ 252 (365)
T 3e7e_A 205 LGNGFLEQ--------------------------------DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQ 252 (365)
T ss_dssp ECGGGTCC--------------------------------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCC
T ss_pred ecccccCc--------------------------------cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCC
Confidence 97622100 0000012259999999996542 2234567899999
Q ss_pred hhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy12288 252 SVEVLIGAGYGPAADIWSTACMAFELATGDYLFDP 286 (393)
Q Consensus 252 aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~ 286 (393)
|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 253 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 253 CVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp CHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 99999999999999999999999999999999953
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=292.54 Aligned_cols=246 Identities=18% Similarity=0.245 Sum_probs=191.0
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
.|++.++||+|+||.||+|.+..++. .||+|.+.... ...+.+.+|+.+++.+ .|+|++++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~iv~~ 87 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL--------------NHPNVLAL 87 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC--------------CCTTBCCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC--------------CCCCeeeE
Confidence 78888999999999999999766544 79999987432 2235677899999998 79999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+.. .+...+++||++ +++|.+.+.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 88 ~~~~~~---~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~- 161 (298)
T 3pls_A 88 IGIMLP---PEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESF- 161 (298)
T ss_dssp CEEECC---SSSCCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTC-
T ss_pred EEEEec---CCCCcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCC-
Confidence 988862 233458999998 889998886633 4588999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-------CCCCCCCCCCCchhHH
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-------HFADEIQTRQYRSVEV 255 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-------~~~~~~~t~~y~aPE~ 255 (393)
.++|+|||++..... ......+|+.|+|||.
T Consensus 162 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 199 (298)
T 3pls_A 162 ------------------------------------------TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199 (298)
T ss_dssp ------------------------------------------CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHH
T ss_pred ------------------------------------------cEEeCcCCCcccccCCcccccccCcCCCCCccccChhh
Confidence 499999999875422 2233456889999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCC-CCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~p-f~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++||||||+++|+|++|..| |...+ .......+.. ..
T Consensus 200 ~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~------~~~~~~~~~~-~~--------------------------- 245 (298)
T 3pls_A 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID------PFDLTHFLAQ-GR--------------------------- 245 (298)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------GGGHHHHHHT-TC---------------------------
T ss_pred hccCCCChhhchhhHHHHHHHHhhCCCCCCccCC------HHHHHHHhhc-CC---------------------------
Confidence 9999999999999999999999995555 43322 1111111111 00
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||++++++.
T Consensus 246 -------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 246 -------------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp -------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 011223456788999999999999999999998763
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=305.14 Aligned_cols=247 Identities=19% Similarity=0.264 Sum_probs=184.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC---ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK---TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
..|++.+.||+|+||.||+|....++ ..||+|.++... .....+.+|+.+++.+ .|+|+++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l--------------~hpnIv~ 154 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF--------------SHPNVLS 154 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC--------------CCTTBCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC--------------CCCCcce
Confidence 37999999999999999999876442 468999886432 2235567788877777 7999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+.. .....++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++||||||+||+++.++
T Consensus 155 ~~~~~~~---~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~ 229 (373)
T 3c1x_A 155 LLGICLR---SEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKF 229 (373)
T ss_dssp CCEEECC---CSSCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTC
T ss_pred EEEEEEc---CCCCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCC
Confidence 9987541 345678999999 679998886543 4578899999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVE 254 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE 254 (393)
.+||+|||+++..... .....+|+.|+|||
T Consensus 230 -------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE 266 (373)
T 3c1x_A 230 -------------------------------------------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266 (373)
T ss_dssp -------------------------------------------CEEECCC---------------------CCGGGSCHH
T ss_pred -------------------------------------------CEEEeeccccccccccccccccccCCCCCcccccChH
Confidence 4999999998755321 12334677899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
++.+..++.++||||||+++|+|++ |.+||...+..+ ....+. .+..
T Consensus 267 ~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~------~~~~~~--~~~~------------------------ 314 (373)
T 3c1x_A 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD------ITVYLL--QGRR------------------------ 314 (373)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC------HHHHHH--TTCC------------------------
T ss_pred HhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH------HHHHHH--cCCC------------------------
Confidence 9999999999999999999999999 778886554321 111111 0100
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...+..+.++|.+||..||.+|||+.|++++
T Consensus 315 ---------------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 315 ---------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp ---------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01123455678899999999999999999999875
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=317.06 Aligned_cols=243 Identities=17% Similarity=0.264 Sum_probs=191.5
Q ss_pred eEEEE-EEecccCceEEEEEEe--CCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 29 RYHVI-RKLGWGHFSTVWLSWD--LQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 29 ~y~~~-~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.+.+. ++||+|+||.||+|.+ ..+++.||||+++.... ..+.+.+|+.+++.+ .|+||++
T Consensus 369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l--------------~hpnIv~ 434 (635)
T 4fl3_A 369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL--------------DNPYIVR 434 (635)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC--------------CCTTBCC
T ss_pred hccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC--------------CCCCEee
Confidence 34444 4899999999999954 45678899999975432 246788999999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. . ...++||||+ +++|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 435 l~~~~~----~-~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~ 506 (635)
T 4fl3_A 435 MIGICE----A-ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQH 506 (635)
T ss_dssp EEEEEE----S-SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETT
T ss_pred EEEEEe----c-CCEEEEEEccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCC
Confidence 999775 2 3478999999 78999988664 3489999999999999999999998 999999999999998877
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~ 255 (393)
.+||+|||+++..... .....+|+.|+|||+
T Consensus 507 -------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~ 543 (635)
T 4fl3_A 507 -------------------------------------------YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543 (635)
T ss_dssp -------------------------------------------EEEECCTTHHHHTTC-------------CGGGSCHHH
T ss_pred -------------------------------------------CEEEEEcCCccccccCccccccccCCCCceeeeChhh
Confidence 4999999998765322 222345788999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|||||||++|+|++ |+.||.+.+ .......+.. +.
T Consensus 544 ~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------~~~~~~~i~~--~~-------------------------- 589 (635)
T 4fl3_A 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEK--GE-------------------------- 589 (635)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TC--------------------------
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC--------------------------
Confidence 999999999999999999999998 999997654 2222221111 10
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+..++..+.+||.+||..||++|||+.++++.
T Consensus 590 -------------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 590 -------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625 (635)
T ss_dssp -------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred -------------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 111234567789999999999999999999998753
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=316.09 Aligned_cols=244 Identities=17% Similarity=0.273 Sum_probs=192.8
Q ss_pred CeEEEEE-EecccCceEEEEEEeCC--CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIR-KLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~-~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+++.+.+ +||+|+||.||+|.+.. ++..||||+++... ...+.+.+|+.+++.+ .|+||++
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l--------------~hpniv~ 400 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL--------------DNPYIVR 400 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC--------------CCCCEee
Confidence 4666666 89999999999997764 45679999987542 2356788999999988 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. . ...++||||+ +++|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++
T Consensus 401 l~~~~~----~-~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~ 473 (613)
T 2ozo_A 401 LIGVCQ----A-EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRH 473 (613)
T ss_dssp EEEEEE----S-SSEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETT
T ss_pred EEEEec----c-CCeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCC
Confidence 999875 2 3489999999 77888887554 34589999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~ 255 (393)
.+||+|||+++..... .....+|+.|+|||+
T Consensus 474 -------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~ 510 (613)
T 2ozo_A 474 -------------------------------------------YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510 (613)
T ss_dssp -------------------------------------------EEEECCCSTTTTCC--------------CCTTSCHHH
T ss_pred -------------------------------------------cEEEeeccCcccccCCCceeeeccCCCCccceeCHhh
Confidence 5999999999865322 112345688999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|||||||++|||++ |+.||.+.+ ..+....+.. |.
T Consensus 511 ~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------~~~~~~~i~~--~~-------------------------- 556 (613)
T 2ozo_A 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------GPEVMAFIEQ--GK-------------------------- 556 (613)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------SHHHHHHHHT--TC--------------------------
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC------HHHHHHHHHc--CC--------------------------
Confidence 999999999999999999999998 999997655 2222221111 10
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...++..++..+.+||.+||..||.+||++.++++
T Consensus 557 -------------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 557 -------------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp -------------CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred -------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 11233456778999999999999999999999864
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=290.53 Aligned_cols=256 Identities=22% Similarity=0.278 Sum_probs=194.8
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
|...+.||+|+||.||+|.+ +++.||+|.+.... ...+.+.+|+.+++.+ .|+|+++++
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l--------------~h~~i~~~~ 96 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC--------------QHENLVELL 96 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC--------------CCTTBCCEE
T ss_pred cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc--------------CCCCeEEEE
Confidence 33458999999999999976 67899999886432 2245678999999999 799999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD-YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+.+. .....++|||++ +++|.+.+.... ...+++..+..++.|++.||+|||++ |++|+||||+||+++.++
T Consensus 97 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~~~~- 170 (307)
T 2nru_A 97 GFSS----DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLDEAF- 170 (307)
T ss_dssp EEEC----SSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTC-
T ss_pred EEEe----cCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEcCCC-
Confidence 9886 556789999999 789998886432 24588999999999999999999998 999999999999997665
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~ 257 (393)
.++|+|||++...... .....||+.|+|||.+.
T Consensus 171 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 208 (307)
T 2nru_A 171 ------------------------------------------TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR 208 (307)
T ss_dssp ------------------------------------------CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT
T ss_pred ------------------------------------------cEEEeecccccccccccccccccccCCCcCcCChHHhc
Confidence 4999999998755432 22346899999999987
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+. ++.++||||||+++|+|++|..||.......... .+..........-....
T Consensus 209 ~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------------------- 261 (307)
T 2nru_A 209 GE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL---DIKEEIEDEEKTIEDYI----------------------- 261 (307)
T ss_dssp TE-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT---HHHHHHHTTSCCHHHHS-----------------------
T ss_pred CC-CCccchhHHHHHHHHHHHHCCCCcccCcchHHHH---HHHHHhhhhhhhhhhhc-----------------------
Confidence 54 7899999999999999999999997655332211 11111110000000000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.......+...+..+.+++.+||..||.+|||+.+++++
T Consensus 262 -------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 262 -------DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp -------CSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred -------cccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 000112345677889999999999999999999999875
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=303.83 Aligned_cols=284 Identities=17% Similarity=0.138 Sum_probs=194.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhc---------ccCCCC
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVG---------RKSNVH 88 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~---------~~~~~~ 88 (393)
.++|++.++||+|+||.||+|++ +++.||||++..... ..+.+.+|+.+++.+. |.+.+.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46899999999999999999988 789999999875421 1266789999999996 322221
Q ss_pred ccc---ccCcccccceeccccceeecC---------CCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q psy12288 89 SSA---YNTQASEKVIRLLNDFKIYSR---------NGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 89 ~~~---~~~~~~~~i~~~~~~~~~~~~---------~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~ 155 (393)
... .....|+||+++++.|..... ....+++||||+ +|++++.+.. ..+++..++.++.||+.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHH
Confidence 111 011237888888888763110 256799999999 6666766644 348999999999999999
Q ss_pred HHHhh-hcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcc
Q psy12288 156 LNYLH-TQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNA 234 (393)
Q Consensus 156 l~~lH-~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~ 234 (393)
|+||| ++ ||+||||||+|||++.++.... .....+.. .........+||+|||++
T Consensus 174 L~~lH~~~-~ivHrDlKp~NILl~~~~~~~~-------~~~~~~~~----------------~~~~~~~~~vkL~DFG~a 229 (336)
T 2vuw_A 174 LAVAEASL-RFEHRDLHWGNVLLKKTSLKKL-------HYTLNGKS----------------STIPSCGLQVSIIDYTLS 229 (336)
T ss_dssp HHHHHHHH-CCBCSCCCGGGEEEEECSCSEE-------EEEETTEE----------------EEEECTTEEEEECCCTTC
T ss_pred HHHHHHhC-CEeECCCCHHHEEEeccCCcce-------eeeccCcc----------------ccccCCCceEEEeecccc
Confidence 99999 88 9999999999999987652000 00000000 000001125999999999
Q ss_pred ccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHH-HHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHH
Q psy12288 235 CWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACM-AFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEV 313 (393)
Q Consensus 235 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~-l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~ 313 (393)
+..... ..+||+.|+|||++.+.. +.++|||||+++ .++++.|..||..... .......+.......+.
T Consensus 230 ~~~~~~--~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~-- 299 (336)
T 2vuw_A 230 RLERDG--IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW-----LHYLTDKMLKQMTFKTK-- 299 (336)
T ss_dssp BEEETT--EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH-----HHHHHHHHHHTCCCSSC--
T ss_pred EecCCC--cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh-----hhHHHHhhhhhhccCcc--
Confidence 866532 347899999999998776 899999998776 7778889988842100 00011111110000000
Q ss_pred HhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh-cCCCCC
Q psy12288 314 LSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL-RHPWLN 387 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell-~hp~~~ 387 (393)
.....+...+..+.+||++||+.| |++|+| +||||+
T Consensus 300 ---------------------------------~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 300 ---------------------------------CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp ---------------------------------CCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred ---------------------------------cchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 000012457889999999999977 999999 999995
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=325.32 Aligned_cols=249 Identities=19% Similarity=0.260 Sum_probs=197.7
Q ss_pred ccccCCeeCCeEEEEEEecccCceEEEEEEeCC-CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQ-DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
++..|+.+.++|++.+.||+|+||.||+|.+.. +++.||||++.... .....+.+|+.+++.+
T Consensus 71 ~~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------------- 136 (681)
T 2pzi_A 71 QLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-------------- 136 (681)
T ss_dssp SSCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC--------------
T ss_pred CCCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc--------------
Confidence 467889999999999999999999999999976 78999999886432 2234567788888877
Q ss_pred ccccceeccccceeecCCC-eEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCC
Q psy12288 96 ASEKVIRLLNDFKIYSRNG-THICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPE 173 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~-~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~ 173 (393)
.|+||+++++.+......+ ...++||||+ +++|.+.+.. .+++.++..++.||+.||.|||++ ||+||||||+
T Consensus 137 ~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~ 211 (681)
T 2pzi_A 137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPE 211 (681)
T ss_dssp CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGG
T ss_pred CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChH
Confidence 7999999999988654433 2369999999 6777765533 489999999999999999999998 9999999999
Q ss_pred ceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchh
Q psy12288 174 NILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSV 253 (393)
Q Consensus 174 NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aP 253 (393)
||+++.+ .+||+|||++...... ....||+.|+||
T Consensus 212 NIll~~~--------------------------------------------~~kl~DFG~a~~~~~~-~~~~gt~~y~aP 246 (681)
T 2pzi_A 212 NIMLTEE--------------------------------------------QLKLIDLGAVSRINSF-GYLYGTPGFQAP 246 (681)
T ss_dssp GEEECSS--------------------------------------------CEEECCCTTCEETTCC-SCCCCCTTTSCT
T ss_pred HeEEeCC--------------------------------------------cEEEEecccchhcccC-CccCCCccccCH
Confidence 9999754 2899999999866543 456789999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+.. +.++|||||||++|+|++|..||.+...... +.
T Consensus 247 E~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----------------~~---------------------- 286 (681)
T 2pzi_A 247 EIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----------------PE---------------------- 286 (681)
T ss_dssp THHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----------------CT----------------------
T ss_pred HHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc-----------------cc----------------------
Confidence 9998764 8999999999999999999888864221110 00
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
.. .....+..+.++|.+||..||.+||+..+.+.|+|+
T Consensus 287 ----~~-----------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 287 ----DD-----------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp ----TC-----------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ----cc-----------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 00 001234578899999999999999998888888765
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=312.82 Aligned_cols=248 Identities=16% Similarity=0.261 Sum_probs=196.7
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCC---CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
...++|++.+.||+|+||.||+|.+..+ +..||+|.++... ...+.+.+|+.+++.+ .|+|
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l--------------~Hpn 452 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF--------------DHPH 452 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC--------------CCTT
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC--------------CCCC
Confidence 3457899999999999999999998754 4579999876432 2236678899999998 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|+++++.+. .+..++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ |++||||||+|||++
T Consensus 453 Iv~l~~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~ 525 (656)
T 2j0j_A 453 IVKLIGVIT-----ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVS 525 (656)
T ss_dssp BCCEEEEEC-----SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEE
T ss_pred CCeEEEEEe-----cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEe
Confidence 999998763 34578999999 689998887543 3588999999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVE 254 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE 254 (393)
.++ .+||+|||++....... ....+|+.|+|||
T Consensus 526 ~~~-------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE 562 (656)
T 2j0j_A 526 SND-------------------------------------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562 (656)
T ss_dssp ETT-------------------------------------------EEEECCCCCCCSCCC----------CCGGGCCHH
T ss_pred CCC-------------------------------------------CEEEEecCCCeecCCCcceeccCCCCCcceeCHH
Confidence 776 59999999998654321 2335678899999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
++.+..++.++||||||+++|+|++ |..||.+.. ..+.+..+.. +.
T Consensus 563 ~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~~~~~~~i~~--~~------------------------- 609 (656)
T 2j0j_A 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK------NNDVIGRIEN--GE------------------------- 609 (656)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHH--TC-------------------------
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHc--CC-------------------------
Confidence 9999999999999999999999997 999997654 2222222211 10
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...+..+.++|.+||..||.+|||+.++++.
T Consensus 610 --------------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 610 --------------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp --------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred --------------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 011234556788999999999999999999999863
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=292.59 Aligned_cols=262 Identities=16% Similarity=0.250 Sum_probs=193.2
Q ss_pred ccCCCCCCccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccC
Q psy12288 9 YMEYRPGGYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~ 85 (393)
++...+.....+...+...++|++.+.||+|+||.||+|.+.. .+|+|+++.. ....+.+.+|+.+++.+
T Consensus 14 ~~~~~~~~~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l---- 86 (319)
T 2y4i_B 14 FPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQT---- 86 (319)
T ss_dssp --------CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTC----
T ss_pred cCccccccccccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcC----
Confidence 3333334444445555566899999999999999999998753 4999988643 22345677888888887
Q ss_pred CCCcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q psy12288 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR 164 (393)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~ 164 (393)
.|+|++++++.+. .....++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ |
T Consensus 87 ----------~h~~iv~~~~~~~----~~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~ 150 (319)
T 2y4i_B 87 ----------RHENVVLFMGACM----SPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK-G 150 (319)
T ss_dssp ----------CCTTBCCCCEEEE----CSSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT-T
T ss_pred ----------CCCCEeEEEEEEe----cCCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-C
Confidence 7999999999887 566799999999 688888876543 4588999999999999999999998 9
Q ss_pred eeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----
Q psy12288 165 IIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----- 239 (393)
Q Consensus 165 i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----- 239 (393)
++||||||+||+++ ++ .++|+|||++.....
T Consensus 151 i~H~dlkp~NIl~~-~~-------------------------------------------~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 151 ILHKDLKSKNVFYD-NG-------------------------------------------KVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp CCCCCCCSTTEEEC----------------------------------------------CCEECCCSCCC---------
T ss_pred ccccCCChhhEEEe-CC-------------------------------------------CEEEeecCCccccccccccc
Confidence 99999999999997 33 389999998765421
Q ss_pred ---CCCCCCCCCCCchhHHHhc---------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhC
Q psy12288 240 ---HFADEIQTRQYRSVEVLIG---------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVG 307 (393)
Q Consensus 240 ---~~~~~~~t~~y~aPE~~~~---------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g 307 (393)
......||+.|+|||++.+ ..++.++||||||+++|+|++|..||.... .......+.. +
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~--~ 258 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP------AEAIIWQMGT--G 258 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC------HHHHHHHHHT--T
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHhcc--C
Confidence 1223457899999999975 347889999999999999999999997543 1222111111 1
Q ss_pred CCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 308 PIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 308 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..|. ......+..+.++|.+||..||.+|||+.++++.
T Consensus 259 ~~~~--------------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 296 (319)
T 2y4i_B 259 MKPN--------------------------------------LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM 296 (319)
T ss_dssp CCCC--------------------------------------CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred CCCC--------------------------------------CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1000 0011234568899999999999999999999875
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=282.82 Aligned_cols=239 Identities=15% Similarity=0.137 Sum_probs=183.0
Q ss_pred CCCCccccccCC-eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc----hhhHHHHHHHHHhcccCCC
Q psy12288 13 RPGGYCPVQIGD-LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA----DTARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 13 ~~~~~~~~~~~~-~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~ 87 (393)
.+..-.++..|+ .++++|++.+.||+|+||.||+|++..+++.||||++....... ..+.+|+.+++.+
T Consensus 15 ~~~~~~~~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------ 88 (286)
T 3uqc_A 15 APPDDVQLVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI------ 88 (286)
T ss_dssp -----CCCCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC------
T ss_pred CCCCCCcCCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC------
Confidence 334456688899 88899999999999999999999999999999999997653332 5678888888887
Q ss_pred CcccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
.|+|++++++.+. ..+..++||||+ +++|.+++... ....++..++.|++.||+|||++ |++
T Consensus 89 --------~hp~iv~~~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~-giv 151 (286)
T 3uqc_A 89 --------DKPGVARVLDVVH----TRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA-GVA 151 (286)
T ss_dssp --------CCTTBCCEEEEEE----ETTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred --------CCCCcceeeEEEE----ECCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 8999999999887 456799999999 78888887432 45667889999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCC
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ 246 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~ 246 (393)
||||||+||+++.++ .++|++++
T Consensus 152 H~Dikp~NIll~~~g-------------------------------------------~~kl~~~~-------------- 174 (286)
T 3uqc_A 152 LSIDHPSRVRVSIDG-------------------------------------------DVVLAYPA-------------- 174 (286)
T ss_dssp CCCCSGGGEEEETTS-------------------------------------------CEEECSCC--------------
T ss_pred cCCCCcccEEEcCCC-------------------------------------------CEEEEecc--------------
Confidence 999999999998776 37876443
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
|++ +++.++|||||||++|+|++|+.||.+.+.......... ...+..+
T Consensus 175 ---~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~-----~~~~~~~---------------- 223 (286)
T 3uqc_A 175 ---TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER-----DTAGQPI---------------- 223 (286)
T ss_dssp ---CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB-----CTTSCBC----------------
T ss_pred ---ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH-----HhccCCC----------------
Confidence 233 378999999999999999999999986653221000000 0000000
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+....+..+.++|.+||..||.+| |+.|+++.
T Consensus 224 --------------------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 224 --------------------EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp --------------------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred --------------------ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 0001123456788999999999999999 99998863
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-29 Score=252.47 Aligned_cols=183 Identities=17% Similarity=0.085 Sum_probs=126.8
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEeccc-----------ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-----------VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
...+.|+.|.+..++...+|+.+++|++.... ...+.+.+|+++|+.+. .|+|+++
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~-------------~~~~i~~ 306 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPP-------------AGFDAPA 306 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCC-------------TTCCCCC
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcC-------------CCCCeeE
Confidence 34567777777777777789999999986532 22356888999999984 6889999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. ++..+||||||+ |++|.+.+.... .++.. .|+.||+.||+|+|++ ||+||||||+|||++.++
T Consensus 307 ~~~~~e----d~~~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg 376 (569)
T 4azs_A 307 VLAHGE----NAQSGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQ 376 (569)
T ss_dssp EEEEEE----CSSEEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTS
T ss_pred EEEEEE----ECCEEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCC
Confidence 999988 788899999999 889999987653 35543 5889999999999998 999999999999998777
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||+++..... ....+||+.|+|||++.+
T Consensus 377 -------------------------------------------~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g 413 (569)
T 4azs_A 377 -------------------------------------------HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE 413 (569)
T ss_dssp -------------------------------------------CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------CEEEeecccCeeCCCCCccccCceechhhccHHHhCC
Confidence 4999999999865433 223468999999999876
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCC
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYL 283 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~p 283 (393)
. +..++|+||+|++++++.++..+
T Consensus 414 ~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 414 N-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ----------------CCCCTTHHH
T ss_pred C-CCCcccccccccchhhhccccch
Confidence 5 56789999999998877665433
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=209.15 Aligned_cols=178 Identities=15% Similarity=0.054 Sum_probs=131.6
Q ss_pred EEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---------cchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
...+.||+|+||.||+| ...+..+++|....... ..+.+.+|+.+++.+ .|+|++
T Consensus 339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l--------------~h~nIv 402 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV--------------KDFGIP 402 (540)
T ss_dssp ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG--------------GGGTCC
T ss_pred CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc--------------CCCCcC
Confidence 34568999999999999 34567888987643211 124468999999999 788888
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++..... .....++||||+ +++|.+++.. +..++.|++.||+|||++ ||+||||||+|||++.
T Consensus 403 ~~~~~~~----~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~- 466 (540)
T 3en9_A 403 APYIFDV----DLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK- 466 (540)
T ss_dssp CCCEEEE----ETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS-
T ss_pred ceEEEEE----eCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC-
Confidence 4433333 223358999999 6898888644 457999999999999998 9999999999999965
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----------CCCCCCCCC
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----------ADEIQTRQY 250 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----------~~~~~t~~y 250 (393)
. +||+|||+++...... ....||+.|
T Consensus 467 ~--------------------------------------------~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y 502 (540)
T 3en9_A 467 D--------------------------------------------LYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHE 502 (540)
T ss_dssp S--------------------------------------------EEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGG
T ss_pred e--------------------------------------------EEEEECccCEECCCccccccchhhhhhhhcCCCCc
Confidence 2 9999999998765421 234689999
Q ss_pred chhHHHhc--CCCCchhhHHhHHHHHHHHHhCCCCC
Q psy12288 251 RSVEVLIG--AGYGPAADIWSTACMAFELATGDYLF 284 (393)
Q Consensus 251 ~aPE~~~~--~~~~~~~DiwSlG~~l~ell~g~~pf 284 (393)
+|||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 503 ~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 503 KFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp GHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 99999987 55788899999988888877766555
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-22 Score=183.35 Aligned_cols=154 Identities=19% Similarity=0.252 Sum_probs=116.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------------------cchhhHHHHHHHHHhcccCCCCc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------------------YADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------------~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
.|.+.+.||+|+||.||+|.+ .+++.||+|+++.... ....+.+|+.+++.+.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~------- 162 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ------- 162 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-------
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-------
Confidence 344559999999999999999 8899999999864321 2345789999999983
Q ss_pred ccccCcccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
| +++.+.+. .+..++||||+ +++|.+ +. ......++.|++.||++||+. |++||
T Consensus 163 ---------~-~~v~~~~~-----~~~~~lvmE~~~g~~L~~-l~--------~~~~~~i~~qi~~~l~~lH~~-giiHr 217 (282)
T 1zar_A 163 ---------G-LAVPKVYA-----WEGNAVLMELIDAKELYR-VR--------VENPDEVLDMILEEVAKFYHR-GIVHG 217 (282)
T ss_dssp ---------T-SSSCCEEE-----EETTEEEEECCCCEEGGG-CC--------CSCHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred ---------C-CCcCeEEe-----ccceEEEEEecCCCcHHH-cc--------hhhHHHHHHHHHHHHHHHHHC-CCEeC
Confidence 2 34444332 23468999999 668776 31 134567999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~ 248 (393)
||||+|||++ ++ .++|+|||+++. +.
T Consensus 218 Dlkp~NILl~-~~-------------------------------------------~vkl~DFG~a~~----------~~ 243 (282)
T 1zar_A 218 DLSQYNVLVS-EE-------------------------------------------GIWIIDFPQSVE----------VG 243 (282)
T ss_dssp CCSTTSEEEE-TT-------------------------------------------EEEECCCTTCEE----------TT
T ss_pred CCCHHHEEEE-CC-------------------------------------------cEEEEECCCCeE----------CC
Confidence 9999999998 65 599999999863 44
Q ss_pred CCchhHHHhc----------CCCCchhhHHh
Q psy12288 249 QYRSVEVLIG----------AGYGPAADIWS 269 (393)
Q Consensus 249 ~y~aPE~~~~----------~~~~~~~DiwS 269 (393)
.++|||.+.. ..++..+|+|.
T Consensus 244 ~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 244 EEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 5789999854 23455556664
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=158.90 Aligned_cols=125 Identities=17% Similarity=0.170 Sum_probs=92.4
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCce--EEEEEEeccccc-------------------------chhhHHHHHHHHHh
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTF--VALKIVKSDQVY-------------------------ADTARDEIVLLKAV 81 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~~~~-------------------------~~~~~~E~~~l~~l 81 (393)
-|++.+.||+|+||.||+|.+..+|+. ||||+++..... ...+.+|+.+++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999998778888 999987643111 12567899999999
Q ss_pred cccCCCCcccccCcccccceeccccceeecCCCeEEEEEEeeccc------cHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q psy12288 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGY------NLLRLIARSDYKGIHIQNVRTIIKQVLEG 155 (393)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~------~l~~~~~~~~~~~l~~~~~~~i~~ql~~~ 155 (393)
.+.+. .+|. .+.. ...++||||+++ +|.+.... .+...+..++.|++.|
T Consensus 128 ~~~~i---------~~p~---~~~~--------~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~ 182 (258)
T 1zth_A 128 KEAGV---------SVPQ---PYTY--------MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVEN 182 (258)
T ss_dssp HHTTC---------CCCC---EEEE--------ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHH
T ss_pred HhCCC---------CCCe---EEEc--------CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHH
Confidence 54321 1121 2111 235799999953 56555322 2355778899999999
Q ss_pred HHHhh-hcCCeeeccCCCCceEEee
Q psy12288 156 LNYLH-TQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 156 l~~lH-~~~~i~H~dlkp~NIl~~~ 179 (393)
|.+|| +. |++||||||+|||++.
T Consensus 183 l~~lH~~~-givHrDlkp~NILl~~ 206 (258)
T 1zth_A 183 VKRLYQEA-ELVHADLSEYNIMYID 206 (258)
T ss_dssp HHHHHHTS-CEECSSCSTTSEEESS
T ss_pred HHHHHHHC-CEEeCCCCHHHEEEcC
Confidence 99999 87 9999999999999965
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.63 E-value=6.9e-16 Score=144.77 Aligned_cols=122 Identities=18% Similarity=0.241 Sum_probs=82.4
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccc---------------hh--------hHHHHHHHHHhcccCC
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYA---------------DT--------ARDEIVLLKAVGRKSN 86 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------~~--------~~~E~~~l~~l~~~~~ 86 (393)
|.+...||+|++|.||+|.+. +|+.||||+++...... .. ..+|...|..+.....
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999875 68899999986432110 00 1234455555521110
Q ss_pred CCcccccCcccccceeccccceeecCCCeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
.+...+ . ....++||||++ ..+..+ ........++.|++.+|.+||+. |+
T Consensus 176 ------------~vp~p~---~-----~~~~~LVME~i~G~~L~~l--------~~~~~~~~l~~qll~~l~~lH~~-gI 226 (397)
T 4gyi_A 176 ------------PVPEPI---A-----QSRHTIVMSLVDALPMRQV--------SSVPDPASLYADLIALILRLAKH-GL 226 (397)
T ss_dssp ------------SCCCEE---E-----EETTEEEEECCSCEEGGGC--------CCCSCHHHHHHHHHHHHHHHHHT-TE
T ss_pred ------------CCCeee---e-----ccCceEEEEecCCccHhhh--------cccHHHHHHHHHHHHHHHHHHHC-CC
Confidence 011111 1 011369999994 444322 22334567899999999999987 99
Q ss_pred eeccCCCCceEEeech
Q psy12288 166 IHTDIKPENILMCVDY 181 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~ 181 (393)
+||||||.|||++.++
T Consensus 227 VHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 227 IHGDFNEFNILIREEK 242 (397)
T ss_dssp ECSCCSTTSEEEEEEE
T ss_pred cCCCCCHHHEEEeCCC
Confidence 9999999999998876
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.9e-10 Score=101.88 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=78.7
Q ss_pred CCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 23 GDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+..+. .|++...++.|+.+.||++... +..+++|+..... .....+.+|..+++.+.. +..++
T Consensus 10 ~~~l~-~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~-------------~~~vP 73 (263)
T 3tm0_A 10 KKLIE-KYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-------------KLPVP 73 (263)
T ss_dssp HHHHT-TSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-------------TSCCC
T ss_pred HHHhc-cceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc-------------CCCCC
Confidence 34443 6999999999999999999643 6789999887422 234578999999999943 22344
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
++++... ..+..++|||++ |.++...+ .+......++.++..+++.||+
T Consensus 74 ~v~~~~~----~~~~~~lv~e~i~G~~l~~~~-------~~~~~~~~~~~~l~~~l~~LH~ 123 (263)
T 3tm0_A 74 KVLHFER----HDGWSNLLMSEADGVLCSEEY-------EDEQSPEKIIELYAECIRLFHS 123 (263)
T ss_dssp CEEEEEE----ETTEEEEEEECCSSEEHHHHC-------CTTTCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEe----cCCceEEEEEecCCeehhhcc-------CCcccHHHHHHHHHHHHHHHhC
Confidence 5554444 356789999999 55655432 1223345688899999999998
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.88 E-value=9.4e-09 Score=91.58 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=66.1
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
.|.+....+.|..+.||++.. .+|..+++|+.... ....+..|..+++.+.... + .+++++....
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~-~-----------~vP~~~~~~~ 85 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTG-V-----------PCAAVLDVVT 85 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTT-C-----------CBCCEEEEEE
T ss_pred CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCC-C-----------CCCeEEEecc
Confidence 466655545666799999954 45678999987653 3466889999999995421 1 1333444333
Q ss_pred eecCCCeEEEEEEeeccc-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 109 IYSRNGTHICMVFEVMGY-NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
.++..++|||++.| ++ . .. ... ...++.++...++.||..
T Consensus 86 ----~~~~~~~v~e~i~G~~l-~-~~-----~~~---~~~~~~~l~~~l~~lh~~ 126 (264)
T 1nd4_A 86 ----EAGRDWLLLGEVPGQDL-L-SS-----HLA---PAEKVSIMADAMRRLHTL 126 (264)
T ss_dssp ----CSSCEEEEEECCSSEET-T-TS-----CCC---HHHHHHHHHHHHHHHTTS
T ss_pred ----CCCCCEEEEEecCCccc-C-cC-----cCC---HhHHHHHHHHHHHHHhCC
Confidence 34558999999944 44 3 11 111 224566777777777753
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.69 E-value=2.1e-08 Score=91.81 Aligned_cols=106 Identities=16% Similarity=0.062 Sum_probs=63.9
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
+.++.|..+.||++. ..+++|+.... .....+.+|..+++.+.....+ ..|. .+.... ....
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v--------~vP~---~~~~~~-~~~~ 87 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPL--------PIPE---VVFTGM-PSET 87 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSS--------CCCC---EEEECC-CCSS
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCC--------CCCc---eEeecC-CCCC
Confidence 458899999999873 45888986533 2346788999999998543221 1222 221111 0011
Q ss_pred CeEEEEEEeecc-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 114 GTHICMVFEVMG-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 114 ~~~~~iv~e~~~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
....++||+++. ..+...... .++.++...++.++...++.||.
T Consensus 88 ~~~~~~vm~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~ 132 (304)
T 3sg8_A 88 YQMSFAGFTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHS 132 (304)
T ss_dssp CSCSCEEEECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHc
Confidence 123578899994 444332221 26667777777777777777775
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.68 E-value=3.7e-08 Score=92.37 Aligned_cols=112 Identities=10% Similarity=0.068 Sum_probs=70.6
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEe--ccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.++.++.|.++.||++... +..+++|+.. ... .....+.+|..+++.+... ...+++++...
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~------------~vpvP~~~~~~ 107 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGT------------DVPVAKMYALC 107 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTS------------SSCCCCEEEEE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcC------------CCCCCcEEEEC
Confidence 4678999999999999654 4567888765 322 2245788999999999542 12234444433
Q ss_pred eeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy12288 108 KIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT 161 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~ 161 (393)
... ...+..++|||++.|..+.. .....++..+...++.++..+|+.||.
T Consensus 108 ~~~-~~~g~~~~vme~v~G~~l~~---~~~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 108 EDE-SVIGRAFYIMEFVSGRVLWD---QSLPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CCT-TTTSSCEEEEECCCCBCCCC---TTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CccCCeEEEEEecCCeecCC---CccccCCHHHHHHHHHHHHHHHHHHhC
Confidence 311 11145789999995543211 112336778888899999999999996
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2e-05 Score=71.96 Aligned_cols=74 Identities=22% Similarity=0.123 Sum_probs=47.0
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
++.++.|....||+. +..+++|+... ......+..|..+|+.+.+...+ . +++.+.... .
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v--------~---VP~~~~~~~---~ 83 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKV--------N---IPQYVYIGK---R 83 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSS--------B---CCCEEEEEE---C
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCC--------C---CCCeEeecc---c
Confidence 356788888999988 45688887532 23356788999999999653211 1 222222221 2
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
..+..+++|+++.|
T Consensus 84 ~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 84 SDGNPFVGYRKVQG 97 (306)
T ss_dssp TTSCEEEEEECCCS
T ss_pred CCCceEEEEeccCC
Confidence 34557799999944
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00011 Score=65.51 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=50.5
Q ss_pred EecccCce-EEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecCC
Q psy12288 35 KLGWGHFS-TVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRN 113 (393)
Q Consensus 35 ~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 113 (393)
.+..|..| .||+......+..+.+|+-... ....+.+|...|+.+...- . +++++.... .
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~v----------P---VP~v~~~~~----~ 91 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFM----------P---LPTIKHFIR----T 91 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTS----------C---CCCEEEEEE----E
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCC----------C---cCeEEEEEE----E
Confidence 34445554 6899877777788999986643 3456788999999985321 1 334444333 3
Q ss_pred CeEEEEEEeec-cccHHHH
Q psy12288 114 GTHICMVFEVM-GYNLLRL 131 (393)
Q Consensus 114 ~~~~~iv~e~~-~~~l~~~ 131 (393)
++..++|||++ |.++.+.
T Consensus 92 ~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 92 PDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp TTEEEEEEECCCSEEHHHH
T ss_pred CCeEEEEEEeeCCcccccc
Confidence 45689999999 4444443
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00025 Score=67.08 Aligned_cols=51 Identities=22% Similarity=0.259 Sum_probs=35.3
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEeccc--------ccchhhHHHHHHHHHhcc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--------VYADTARDEIVLLKAVGR 83 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~E~~~l~~l~~ 83 (393)
.+.+|.|..+.||++....+++.+++|...... ........|..+++.+..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~ 93 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGE 93 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhh
Confidence 578999999999999766667789999764321 123456789999998853
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0031 Score=57.81 Aligned_cols=46 Identities=17% Similarity=0.160 Sum_probs=27.6
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 83 (393)
++.|+.|..+.||++... +..+++|+.... ......|..+++.+..
T Consensus 37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~---~~~~~~e~~~l~~L~~ 82 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP---EKKALFSIFAQDYLAK 82 (346)
T ss_dssp EEECC----CEEEEEEET--TEEEEEEEECSC---HHHHHHHHHHHHHHHH
T ss_pred eeeccccccCcEEEEEeC--CCCEEEEecCCC---HHHHHHHHHHHHHHHH
Confidence 356666778899998653 335889988753 2445567777777743
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0007 Score=62.88 Aligned_cols=53 Identities=11% Similarity=0.085 Sum_probs=36.7
Q ss_pred EEEEEe-cccCceEEEEEEeC---C---CCceEEEEEEeccc---c-cchhhHHHHHHHHHhcc
Q psy12288 31 HVIRKL-GWGHFSTVWLSWDL---Q---DKTFVALKIVKSDQ---V-YADTARDEIVLLKAVGR 83 (393)
Q Consensus 31 ~~~~~l-g~G~~g~V~~~~~~---~---~~~~vaiK~~~~~~---~-~~~~~~~E~~~l~~l~~ 83 (393)
...+.| +.|..+.+|+.... . ++..+++|+..... . ....+.+|..+++.+..
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~ 86 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGE 86 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhh
Confidence 345778 88889999988643 0 15578888765432 1 23567899999999854
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0069 Score=54.66 Aligned_cols=46 Identities=13% Similarity=-0.006 Sum_probs=32.3
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|+.|....+|++ ..+++|+............+|..+++.+...
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~ 68 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKA 68 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHT
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHc
Confidence 578888999999998 4588898765433333456799888888543
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.011 Score=56.03 Aligned_cols=26 Identities=19% Similarity=0.368 Sum_probs=21.1
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEE
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKI 60 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~ 60 (393)
++.+|.|..+.||++.. ++..+++|.
T Consensus 39 i~~l~~G~~n~vyrv~~--~~~~~vvK~ 64 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG--SSGSLVIKQ 64 (420)
T ss_dssp EEECCCSSSCEEEEEEC--SSCEEEEEE
T ss_pred EEEccCCCcEEEEEEEc--CCceEEEEE
Confidence 57889999999999954 466789994
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.028 Score=50.28 Aligned_cols=59 Identities=20% Similarity=0.148 Sum_probs=43.9
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~ 84 (393)
..+.+..-++.+|.|..+.||+... .+|+.|.+|+..... .....+..|...|+.+...
T Consensus 12 l~G~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~ 71 (288)
T 3f7w_A 12 LTGREVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRS 71 (288)
T ss_dssp HHCCCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCS
T ss_pred hcCCCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhh
Confidence 3345666788999999999999965 467889999865432 2234578899999999654
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.07 Score=48.31 Aligned_cols=50 Identities=12% Similarity=0.083 Sum_probs=32.2
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
-++.|+.|....+|++... ++ .+++|+.... ...+.+..|..+++.+...
T Consensus 26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~ 75 (322)
T 2ppq_A 26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAK 75 (322)
T ss_dssp EEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHT
T ss_pred EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHC
Confidence 3567788888999998654 23 5788987652 2345677899999888654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.1 Score=47.35 Aligned_cols=49 Identities=16% Similarity=0.150 Sum_probs=34.3
Q ss_pred EEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 34 RKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
..++ |....||++.. .+|+.+++|+..........+..|..+++.+...
T Consensus 32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~ 80 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVND 80 (328)
T ss_dssp EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHT
T ss_pred Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHc
Confidence 4456 77888998743 3456789999874433456677899999888643
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.031 Score=50.72 Aligned_cols=75 Identities=21% Similarity=0.257 Sum_probs=51.2
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
.+.|+.|....+|+... ++..+++|+.... ....+..|...|+.+..... ..+++.+....
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~-----------v~VP~vl~~~~---- 101 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTNS-----------INVPLVYGIGN---- 101 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTS-----------SBCCCEEEEEE----
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCC-----------CCcceEEEEee----
Confidence 57789999999999964 4567888987643 25667899999999854311 22334443332
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
..+..++|||++.+
T Consensus 102 ~~g~~~lvme~l~G 115 (312)
T 3jr1_A 102 SQGHSFLLLEALNK 115 (312)
T ss_dssp CSSEEEEEEECCCC
T ss_pred cCCceEEEEEeccC
Confidence 34568999999843
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.021 Score=53.08 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=31.7
Q ss_pred EEEecccCceEEEEEEeCC--------CCceEEEEEEecccccchhhHHHHHHHHHhcc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ--------DKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 83 (393)
...++.|....+|++.... .+..+++|+.............|..+++.+..
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~ 96 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSK 96 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHH
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHh
Confidence 4677888889999997643 12578889876433222334789999998854
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.18 Score=48.36 Aligned_cols=52 Identities=8% Similarity=-0.028 Sum_probs=35.2
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|+.|-...+|++....++..+++|+.............|..+++.+...
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~ 164 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNK 164 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhc
Confidence 5678889899999998765457788998754322222336899999999653
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.40 E-value=0.094 Score=44.53 Aligned_cols=99 Identities=11% Similarity=0.021 Sum_probs=58.4
Q ss_pred ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCC
Q psy12288 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205 (393)
Q Consensus 126 ~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (393)
-+|.+.+...+ .++++++++-++.|.+.+|.-+-.+..-..+=+.|..|++..+|+
T Consensus 33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~----------------------- 88 (229)
T 2yle_A 33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA----------------------- 88 (229)
T ss_dssp EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC-----------------------
T ss_pred ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc-----------------------
Confidence 36777776654 679999999999999999877621101112233457777776663
Q ss_pred CCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh
Q psy12288 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT 279 (393)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~ 279 (393)
+.+.+ ..+ ......+.+||... ...+.+.-|+|||+++|.-+-
T Consensus 89 --------------------V~f~~-~~s---------~~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 89 --------------------VTLAP-AAD---------DAGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp --------------------EEECC-C---------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred --------------------eeccc-ccc---------cccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 33332 110 01123455776653 234688899999999998885
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=95.28 E-value=0.05 Score=50.78 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=31.2
Q ss_pred EEEecccCceEEEEEEeCC-------CCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|..|-...+|++.... ++..+++|+............+|..+++.+...
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~ 113 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAER 113 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHT
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhc
Confidence 3567778888899997642 346788998643322345567899999998643
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.24 E-value=0.16 Score=48.26 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=36.4
Q ss_pred EEEecccCceEEEEEEeCC-------CCceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQ-------DKTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|+.|....+|++.... ++..+++|+.... ...+.+.+|..+++.+...
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~ 135 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSER 135 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhC
Confidence 5678889899999997653 2567889987432 1114566899999988643
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=94.62 E-value=0.18 Score=46.21 Aligned_cols=44 Identities=7% Similarity=0.021 Sum_probs=28.9
Q ss_pred EEEe--cccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcc
Q psy12288 33 IRKL--GWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 33 ~~~l--g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 83 (393)
++.+ |.|....||++... ++ .+++|+..... ...|+.+++.+..
T Consensus 26 ~~~l~~G~g~~N~vy~v~~~-~g-~~vLK~~~~~~-----~~~E~~~l~~L~~ 71 (339)
T 3i1a_A 26 AQFIQGGADTNAFAYQADSE-SK-SYFIKLKYGYH-----DEINLSIIRLLHD 71 (339)
T ss_dssp EEEETTTSCSSCEEEEEECS-SC-EEEEEEEECSS-----CCHHHHHHHHHHH
T ss_pred eEEeeccCccccceEEEEeC-CC-CEEEEEecCcc-----chHHHHHHHHHHh
Confidence 3445 34446889999643 34 78899876533 2578888888854
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=94.54 E-value=0.2 Score=45.53 Aligned_cols=47 Identities=9% Similarity=-0.115 Sum_probs=22.7
Q ss_pred EEecccCceE-EEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcc
Q psy12288 34 RKLGWGHFST-VWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 34 ~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 83 (393)
+.|+.|+... +|+... .++..+++|..... .......|+.+++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~--~~~~~~~e~~~l~~L~~ 71 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPE--EGGDTQPFVDLAQYLRN 71 (333)
T ss_dssp CC--------CCEEEEC-TTCCEEEEEECCTT--TTCCSHHHHHHHHHHHH
T ss_pred eECCCCCCCceEEEEEc-CCCCeEEEEECCCC--CCccccHHHHHHHHHHh
Confidence 4455554444 566643 22455666654332 12566788998888854
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=91.84 E-value=1.5 Score=41.37 Aligned_cols=52 Identities=6% Similarity=0.084 Sum_probs=36.1
Q ss_pred EEEecccCceEEEEEEeCCC-------CceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQD-------KTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.+..|-...+|++..... +..+++|+........-...+|..+++.+...
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~ 133 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNI 133 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHT
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhc
Confidence 46677788899999976531 56788898654433334457899999998643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 393 | ||||
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 7e-74 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-45 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-39 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 7e-37 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 9e-37 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-36 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-36 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 8e-35 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-34 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 7e-34 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 8e-34 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-33 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-33 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-33 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 6e-33 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-32 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-32 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-32 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-32 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 9e-32 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-30 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-30 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 5e-30 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-29 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-29 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-28 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-28 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-27 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-27 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-27 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-27 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-26 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-25 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-25 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 6e-25 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-24 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-23 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-22 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-21 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-21 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 8e-21 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-19 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 6e-19 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 9e-19 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-18 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 8e-18 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-17 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-17 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-16 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 7e-16 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-15 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 3e-15 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 6e-15 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 6e-15 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-14 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-14 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-14 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 7e-14 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-13 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-13 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-12 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-11 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-11 |
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 232 bits (592), Expect = 7e-74
Identities = 167/372 (44%), Positives = 227/372 (61%), Gaps = 41/372 (11%)
Query: 17 YCPVQIGDLF-NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEI 75
Y P G+ + + RY ++RKLGWGHFSTVWL+ D+ + T VA+KIV+ D+VY + A DEI
Sbjct: 1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEI 60
Query: 76 VLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARS 135
LL+ V N + + +++LL+ F NG H+ MVFEV+G NLL LI +
Sbjct: 61 KLLQRVNDADNTKEDSMG---ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY 117
Query: 136 DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHH 195
+++GI + V+ I KQ+L GL+Y+H +C IIHTDIKPEN+LM +
Sbjct: 118 EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV--------------- 162
Query: 196 KIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEV 255
+ I +KIADLGNACW D+H+ + IQTR+YRS EV
Sbjct: 163 ----------------------DSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEV 200
Query: 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
L+GA +G ADIWSTAC+ FEL TGD+LF+P G Y++DDDH+A I+EL+G +P +L
Sbjct: 201 LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR 260
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
GK T +F +G R I LK W L VLTEKY +SK EA + +DFL PML ++ + RA
Sbjct: 261 NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 320
Query: 376 SAADCLRHPWLN 387
A + HPWL
Sbjct: 321 DAGGLVNHPWLK 332
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (396), Expect = 2e-45
Identities = 69/366 (18%), Positives = 118/366 (32%), Gaps = 69/366 (18%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAV 81
+L + + I +LG G+ V+ +A K++ + E+ +L
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
S ++ F + I + E M L + + I
Sbjct: 62 --------------NSPYIVGFYGAF----YSDGEISICMEHMDGGSLDQVLK-KAGRIP 102
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
Q + + V++GL YL + +I+H D+KP NIL+ +
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE------------------- 143
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA-DEIQTRQYRSVEVLIGAG 260
+K+ D G + + D A + TR Y S E L G
Sbjct: 144 ------------------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y +DIWS E+A G Y P KE + + P + G+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
Y I L + + + + S + +F DF+ L N RA
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 381 LRHPWL 386
+ H ++
Sbjct: 296 MVHAFI 301
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 2e-39
Identities = 71/364 (19%), Positives = 135/364 (37%), Gaps = 79/364 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQD-KTFVALKIVK---SDQVYADTARDEIVLLKAVGRK 84
+Y + ++G G + V+ + DL++ FVALK V+ ++ + E+ +L+ +
Sbjct: 8 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKI-YSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
+ + V+RL + + + T + +VFE + +L + + G+ +
Sbjct: 68 EHPN-----------VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 116
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ ++ Q+L GL++LH+ ++H D+KP+NIL+ ++ K+
Sbjct: 117 TIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILV------------TSSGQIKL------ 157
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
L + T YR+ EVL+ + Y
Sbjct: 158 -----------------------ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYAT 194
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
D+WS C+ E+ LF D D L I++++G +E + R
Sbjct: 195 PVDLWSVGCIFAEMFRRKPLFRGS------SDVDQLGKILDVIGLPGEEDWPRDVALPRQ 248
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
+ + I+ D LL L N R SA L H
Sbjct: 249 AFHSKSAQPIEKFVTD---------------IDELGKDLLLKCLTFNPAKRISAYSALSH 293
Query: 384 PWLN 387
P+
Sbjct: 294 PYFQ 297
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (337), Expect = 7e-37
Identities = 71/362 (19%), Positives = 136/362 (37%), Gaps = 68/362 (18%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G F V+ + + VALK V + + TA EI +L+ + ++
Sbjct: 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V+ + Y+R I +VF+ ++L L++ K + +
Sbjct: 71 VVNLIEICRTKASP----------YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-I 119
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ +++ +L GL Y+H + +I+H D+K N+L+ K+
Sbjct: 120 KRVMQMLLNGLYYIH-RNKILHRDMKAANVLI------------TRDGVLKL-------- 158
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA-GYGPA 264
+DF L + + N+ + + + + T YR E+L+G YGP
Sbjct: 159 ----ADFGL----------ARAFSLAKNSQP--NRYTNRVVTLWYRPPELLLGERDYGPP 202
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
D+W C+ E+ T + + LA I +L G I EV
Sbjct: 203 IDLWGAGCIMAEMWTRSPIMQGN------TEQHQLALISQLCGSITPEVWPNVD------ 250
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
N+ + L+ + + + D + +L ++ R + D L H
Sbjct: 251 ----NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306
Query: 385 WL 386
+
Sbjct: 307 FF 308
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (339), Expect = 9e-37
Identities = 86/379 (22%), Positives = 143/379 (37%), Gaps = 74/379 (19%)
Query: 17 YCPVQIGDL-FNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADT 70
+ V++GD F RY ++ +G G V ++D VA+K + +Q +A
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 71 ARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF--KIYSRNGTHICMVFEVMGYNL 128
A E+VL+K V + +I LLN F + + +V E+M NL
Sbjct: 63 AYRELVLMKCVN--------------HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 108
Query: 129 LRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMA 188
++I + + + ++ Q+L G+ +LH IIH D+KP N + V D ++
Sbjct: 109 CQVI----QMELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSN--IVVKSDCTLKIL 161
Query: 189 RDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR 248
DF L + TR
Sbjct: 162 ----------------------DF-----------------GLARTAGTSFMMTPYVVTR 182
Query: 249 QYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGP 308
YR+ EV++G GY DIWS C+ E+ LF + D ++E +G
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR------DYIDQWNKVIEQLGT 236
Query: 309 IPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLH 368
E + + + T+R + + +K +AS D L ML
Sbjct: 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296
Query: 369 VNQKLRASAADCLRHPWLN 387
++ R S D L+HP++N
Sbjct: 297 IDPAKRISVDDALQHPYIN 315
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 134 bits (337), Expect = 2e-36
Identities = 62/363 (17%), Positives = 108/363 (29%), Gaps = 107/363 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGRKSNV 87
Y + +LG G F V + A K V + +T R EI + +
Sbjct: 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL------ 80
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
++ L + F + + M++E M L ++ +
Sbjct: 81 --------RHPTLVNLHDAF----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE 128
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
++QV +GL ++H +H D+KPENI+
Sbjct: 129 YMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNE----------------------- 164
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPAA 265
+K+ D G +D T ++ + EV G G
Sbjct: 165 ------------------LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 206
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
D+WS +++ L +G F + DD+ L ++ + S
Sbjct: 207 DMWSVGVLSYILLSGLSPFGGE------NDDETLRNVKSCDWNMDDSAFS---------- 250
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
S+ D DF+ +L + R + L HPW
Sbjct: 251 ------------------------GISE----DGKDFIRKLLLADPNTRMTIHQALEHPW 282
Query: 386 LNP 388
L P
Sbjct: 283 LTP 285
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (333), Expect = 5e-36
Identities = 59/367 (16%), Positives = 121/367 (32%), Gaps = 86/367 (23%)
Query: 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNV 87
Y + +G G F V+ + VA+K V D+ + + E+ +++ +
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------ 70
Query: 88 HSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHI--Q 143
++RL F ++ ++ +V + + + R+ +
Sbjct: 71 --------DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V+ + Q+ L Y+H+ I H DIKP+N+L+ D
Sbjct: 123 YVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPD----------------------- 158
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRS-VEVLIGAG 260
+K+ D G+A + + I +R YR+ +
Sbjct: 159 -------------------TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 199
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
Y + D+WS C+ EL G +F + D L I++++G +E
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDS------GVDQLVEIIKVLGTPTRE-------Q 246
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+R P + +K +V + + +L R + +
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTP------PEAIALCSRLLEYTPTARLTPLEA 300
Query: 381 LRHPWLN 387
H + +
Sbjct: 301 CAHSFFD 307
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (321), Expect = 8e-35
Identities = 78/366 (21%), Positives = 128/366 (34%), Gaps = 88/366 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKS 85
+ + K+G G + V+ + + VALK ++ D + TA EI LLK + +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V + +VFE + +L + + S GI + +
Sbjct: 63 IVK------------------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI 104
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ + Q+L+GL + H+ ++H D+KP+N+L+ +
Sbjct: 105 KSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEG------------------------ 139
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEVLIGAGY- 261
++K+AD G A + E+ T YR+ E+L+G Y
Sbjct: 140 -------------------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
A DIWS C+ E+ T LF + D L I +G + V
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGD------SEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
Y + R D K D L MLH + R SA L
Sbjct: 235 DYKPSFPKWARQDFSKVV-------------PPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 382 RHPWLN 387
HP+
Sbjct: 282 AHPFFQ 287
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (321), Expect = 2e-34
Identities = 59/362 (16%), Positives = 107/362 (29%), Gaps = 102/362 (28%)
Query: 29 RYHVIRK-LGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNV 87
Y V + LG G V ++ + + ALK+++ AR E+ L + +
Sbjct: 12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPH- 66
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVR 146
++R+++ ++ + +V E + G L I + +
Sbjct: 67 ------------IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 114
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
I+K + E + YLH I H D+KPEN+L
Sbjct: 115 EIMKSIGEAIQYLH-SINIAHRDVKPENLLYTSKRP------------------------ 149
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGPA 264
+ +K+ D G A H T Y + EVL Y +
Sbjct: 150 ----------------NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 193
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
D+WS + + L G F G S + + +Y
Sbjct: 194 CDMWSLGVIMYILLCGYPPFYSNHGLAIS------------------PGMKTRIRMGQYE 235
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHP 384
P + + + + +L R + + + HP
Sbjct: 236 FPNPEWSEVS----------------------EEVKMLIRNLLKTEPTQRMTITEFMNHP 273
Query: 385 WL 386
W+
Sbjct: 274 WI 275
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 7e-34
Identities = 60/359 (16%), Positives = 106/359 (29%), Gaps = 108/359 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ + R LG G F V+L+ + Q K +ALK++ Q+ ++ +
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ ++RL Y + T + ++ E + + Q T
Sbjct: 67 N----------ILRLYG----YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATY 111
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
I ++ L+Y H++ R+IH DIKPEN+L+ +
Sbjct: 112 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGE-------------------------- 144
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-TRQYRSVEVLIGAGYGPAADI 267
+KIAD G + + T Y E++ G + D+
Sbjct: 145 -----------------LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 187
Query: 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327
WS + +E G F+ + I + P V
Sbjct: 188 WSLGVLCYEFLVGKPPFEAN------TYQETYKRISRVEFTFPDFV-------------- 227
Query: 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
D + +L N R + L HPW+
Sbjct: 228 ----------------------------TEGARDLISRLLKHNPSQRPMLREVLEHPWI 258
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 126 bits (318), Expect = 8e-34
Identities = 68/372 (18%), Positives = 121/372 (32%), Gaps = 110/372 (29%)
Query: 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVL 77
V+ G +++ Y ++ +LG G F V + K + + T ++EI +
Sbjct: 21 EVKQGSVYD-YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 79
Query: 78 LKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD 136
+ + K+I L + F + + ++ E + G L IA D
Sbjct: 80 MNQL--------------HHPKLINLHDAF----EDKYEMVLILEFLSGGELFDRIAAED 121
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
YK + V ++Q EGL ++H + I+H DIKPENI+
Sbjct: 122 YK-MSEAEVINYMRQACEGLKHMH-EHSIVHLDIKPENIMCETKKAS------------- 166
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVE 254
SVKI D G A ++ T ++ + E
Sbjct: 167 ----------------------------SVKIIDFGLATKLNPDEIVKVTTATAEFAAPE 198
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
++ G D+W+ + + L +G F + D + L ++ ++
Sbjct: 199 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLETLQNVKRCDWEFDEDAF 252
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
S S + DF+ +L + R
Sbjct: 253 S----------------------------------SVSP----EAKDFIKNLLQKEPRKR 274
Query: 375 ASAADCLRHPWL 386
+ D L HPWL
Sbjct: 275 LTVHDALEHPWL 286
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 2e-33
Identities = 76/366 (20%), Positives = 129/366 (35%), Gaps = 93/366 (25%)
Query: 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVK------SDQVYADTARDEIVLLKAVGRKS 85
+ LG G F+TV+ + D VA+K +K + TA EI LL+ +
Sbjct: 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS--- 58
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+I LL+ + ++I +VF+ M +L +I + + ++
Sbjct: 59 -----------HPNIIGLLD----AFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHI 102
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ + L+GL YLH Q I+H D+KP N+L+ +
Sbjct: 103 KAYMLMTLQGLEYLH-QHWILHRDLKPNNLLLDENGV----------------------- 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA-GY 261
+K+AD G A + ++ TR YR+ E+L GA Y
Sbjct: 139 --------------------LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY 178
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
G D+W+ C+ EL D D L I E +G +E
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGD------SDLDQLTRIFETLGTPTEEQWPDMCSLP 232
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
Y T F+ + ++ + D D + + N R +A L
Sbjct: 233 DYVT----FKSFPGIPLHHIFSAAGD----------DLLDLIQGLFLFNPCARITATQAL 278
Query: 382 RHPWLN 387
+ + +
Sbjct: 279 KMKYFS 284
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 3e-33
Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 109/366 (29%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83
+L+ +Y + LG G F V + K K VK + EI +L
Sbjct: 2 ELYE-KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR- 59
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHI 142
++ L F+ + + M+FE + G ++ I S ++ ++
Sbjct: 60 -------------HRNILHLHESFE----SMEELVMIFEFISGLDIFERINTSAFE-LNE 101
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ + + + QV E L +LH I H DI+PENI+
Sbjct: 102 REIVSYVHQVCEALQFLH-SHNIGHFDIRPENIIYQTRRSST------------------ 142
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAG 260
+KI + G A + D+F +Y + EV
Sbjct: 143 -----------------------IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
A D+WS + + L +G F + + + +I+ +E
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAE------TNQQIIENIMNAEYTFDEEAFK----- 228
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
S + DF+ +L +K R +A++
Sbjct: 229 -----------------------------EISI----EAMDFVDRLLVKERKSRMTASEA 255
Query: 381 LRHPWL 386
L+HPWL
Sbjct: 256 LQHPWL 261
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 3e-33
Identities = 79/377 (20%), Positives = 137/377 (36%), Gaps = 90/377 (23%)
Query: 23 GDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK--SDQVYADTARDEIVLL 78
G +F+ RY + +G G + V ++D +K VA+K + Q Y EI +L
Sbjct: 1 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 60
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDY 137
E +I + + + + + +V +MG +L +L+
Sbjct: 61 LRF--------------RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT--- 103
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
+ + ++ + Q+L GL Y+H+ ++H D+KP N+L+ D
Sbjct: 104 QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD--------------- 147
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYR 251
+KI D G A D + + TR YR
Sbjct: 148 ----------------------------LKICDFGLARVADPDHDHTGFLTEYVATRWYR 179
Query: 252 SVEVLI-GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIP 310
+ E+++ GY + DIWS C+ E+ + +F K D L HI+ ++G
Sbjct: 180 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK------HYLDQLNHILGILGSPS 233
Query: 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVN 370
+E L+ N + + L + + A+ S D L ML N
Sbjct: 234 QEDLNCII----------NLKARNYLLSLPHKNKVPWNRLFPNAD-SKALDLLDKMLTFN 282
Query: 371 QKLRASAADCLRHPWLN 387
R L HP+L
Sbjct: 283 PHKRIEVEQALAHPYLE 299
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 6e-33
Identities = 64/368 (17%), Positives = 115/368 (31%), Gaps = 116/368 (31%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLLKAVGRKSNV 87
+ +I +LG G F V+ + + + A K++ + + EI +L +
Sbjct: 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------ 66
Query: 88 HSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRT 147
+++LL+ F ++ ++ E + + + + ++
Sbjct: 67 --------DHPNIVKLLDAF----YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 114
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ KQ L+ LNYLH +IIH D+K NIL +D D
Sbjct: 115 VCKQTLDALNYLH-DNKIIHRDLKAGNILFTLDGD------------------------- 148
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIG-----A 259
+K+AD G + I T + + EV++
Sbjct: 149 ------------------IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 190
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319
Y AD+WS E+A +
Sbjct: 191 PYDYKADVWSLGITLIEMAEIEPPHHEL-------------------------------- 218
Query: 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD 379
P +I +P L + WS +F DFL L N R + +
Sbjct: 219 -----NPMRVLLKIAKSEP----PTLAQPSRWSS----NFKDFLKKCLEKNVDARWTTSQ 265
Query: 380 CLRHPWLN 387
L+HP++
Sbjct: 266 LLQHPFVT 273
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (308), Expect = 2e-32
Identities = 81/383 (21%), Positives = 141/383 (36%), Gaps = 87/383 (22%)
Query: 15 GGYCPVQIGDL---FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYA 68
G+ ++ Y ++ +G G + V + D + VA+K + +++A
Sbjct: 2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 61
Query: 69 DTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGY 126
A E+ LLK + E VI LL+ F + T +V MG
Sbjct: 62 KRAYRELRLLKHM--------------RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT 107
Query: 127 NLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186
+L +L+ ++ + ++ ++ Q+L+GL Y+H IH D+KP N+ + D +
Sbjct: 108 DLGKLM---KHEKLGEDRIQFLVYQMLKGLRYIHAAGI-IHRDLKPGNLAVNEDCEL--- 160
Query: 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ 246
KI D G A D +
Sbjct: 161 ----------------------------------------KILDFGLARQADSEMTGYVV 180
Query: 247 TRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVEL 305
TR YR+ EV++ Y DIWS C+ E+ TG LF S D L I+++
Sbjct: 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK------GSDHLDQLKEIMKV 234
Query: 306 VGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLP 365
G P E + + + + + L+ +LT + + L
Sbjct: 235 TGTPPAEFVQRLQSDEAKN----YMKGLPELEKKDFASILTN-------ASPLAVNLLEK 283
Query: 366 MLHVNQKLRASAADCLRHPWLNP 388
ML ++ + R +A + L HP+
Sbjct: 284 MLVLDAEQRVTAGEALAHPYFES 306
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 122 bits (306), Expect = 2e-32
Identities = 63/360 (17%), Positives = 132/360 (36%), Gaps = 77/360 (21%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y ++RKLG G +S V+ + ++ + V +KI+K + + EI +L+ + N
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--KKIKREIKILENLRGGPN-- 91
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+I L + K +VFE + + + Y+ + ++R
Sbjct: 92 -----------IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFY 134
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ ++L+ L+Y H+ I+H D+KP N+++ +
Sbjct: 135 MYEILKALDYCHSMG-IMHRDVKPHNVMIDHE---------------------------- 165
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWI--DDHFADEIQTRQYRSVEVLIGA-GYGPAA 265
+++ D G A + + + +R ++ E+L+ Y +
Sbjct: 166 --------------HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 211
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
D+WS CM + F + D L I +++G K +
Sbjct: 212 DMWSLGCMLASMIFRKEPFFHG-----HDNYDQLVRIAKVLGT-EDLYDYIDKYNIELDP 265
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
+ + K W + ++ S + DFL +L + + R +A + + HP+
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSP----EALDFLDKLLRYDHQSRLTAREAMEHPY 321
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 2e-32
Identities = 70/376 (18%), Positives = 123/376 (32%), Gaps = 114/376 (30%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV-KSDQVYADTARDEIVLL 78
V +GD +Y K+G G TV+ + D+ VA++ + Q + +EI+++
Sbjct: 13 VSVGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
+ + ++ L+ + G + +V E + L +
Sbjct: 72 RENK--------------NPNIVNYLDSY----LVGDELWVVMEYLAGGSLTDVVTE--T 111
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + + ++ L+ L +LH ++IH DIK +NIL+ +D
Sbjct: 112 CMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSDNILLGMDG----------------- 153
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID---DHFADEIQTRQYRSVEV 255
SVK+ D G I + + T + + EV
Sbjct: 154 --------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
+ YGP DIWS MA E+ G+ + P L
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---------------------NENPLRAL- 225
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
+ N P L S F DFL L ++ + R
Sbjct: 226 --------------YLIATNGTPE-----LQNPEKLSA----IFRDFLNRCLDMDVEKRG 262
Query: 376 SAADCLRHPWLNPRRS 391
SA + L+H +L +
Sbjct: 263 SAKELLQHQFLKIAKP 278
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 3e-32
Identities = 64/371 (17%), Positives = 122/371 (32%), Gaps = 109/371 (29%)
Query: 22 IGDLFNFRY-HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYAD---TARDEIVL 77
+G + R+ ++G G F TV+ D + VA ++ ++ ++E +
Sbjct: 2 VGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEM 61
Query: 78 LKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDY 137
LK + ++R + ++ + I +V E+M L+ + +
Sbjct: 62 LKGL--------------QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-F 106
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQC-RIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
K + I+ +R+ +Q+L+GL +LHT+ IIH D+K +NI +
Sbjct: 107 KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP---------------- 150
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-TRQYRSVEV 255
SVKI DLG A FA + T ++ + E+
Sbjct: 151 --------------------------TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEM 184
Query: 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLS 315
Y + D+++ E+AT +Y + E + V P
Sbjct: 185 YEE-KYDESVDVYAFGMCMLEMATSEYPYS-----ECQNAAQIYRRVTSGVKPAS----- 233
Query: 316 QGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA 375
+ K + + + + N+ R
Sbjct: 234 -----------------------------------FDKVAIPEVKEIIEGCIRQNKDERY 258
Query: 376 SAADCLRHPWL 386
S D L H +
Sbjct: 259 SIKDLLNHAFF 269
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 9e-32
Identities = 81/366 (22%), Positives = 136/366 (37%), Gaps = 88/366 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKS 85
+Y + K+G G + TV+ + + + VALK V+ D+ +A EI LLK + K+
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
V + + +VFE +L + S + + V
Sbjct: 63 IVR------------------LHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIV 103
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ + Q+L+GL + H ++H D+KP+N+L+ + +
Sbjct: 104 KSFLFQLLKGLGFCH-SRNVLHRDLKPQNLLINRNGEL---------------------- 140
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAG-Y 261
K+A+ G A ++ E+ T YR +VL GA Y
Sbjct: 141 ---------------------KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
+ D+WS C+ ELA P + DD L I L+G +E K
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFP-----GNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
Y KP+ +Y T + + D L +L N R SA + L
Sbjct: 235 DY-------------KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
Query: 382 RHPWLN 387
+HP+ +
Sbjct: 282 QHPYFS 287
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (295), Expect = 1e-30
Identities = 85/382 (22%), Positives = 134/382 (35%), Gaps = 86/382 (22%)
Query: 13 RPGGYCPVQIGDLFNF--RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVY 67
RP Y ++ RY + +G G + +V ++D + VA+K + ++
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH 60
Query: 68 ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMG 125
A E+ LLK + E VI LL+ F + +V +MG
Sbjct: 61 AKRTYRELRLLKHM--------------KHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 106
Query: 126 YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185
+L ++ + + +V+ +I Q+L GL Y+H IIH D+KP N+ + D +
Sbjct: 107 ADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH-SADIIHRDLKPSNLAVNEDCEL-- 160
Query: 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI 245
KI D G A DD +
Sbjct: 161 -----------------------------------------KILDFGLARHTDDEMTGYV 179
Query: 246 QTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE 304
TR YR+ E+++ Y DIWS C+ EL TG LF D L I+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------HIDQLKLILR 233
Query: 305 LVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLL 364
LVG E+L + + + + V D L
Sbjct: 234 LVGTPGAELLKKISSESARNY----IQSLTQMPKMNFANVF-------IGANPLAVDLLE 282
Query: 365 PMLHVNQKLRASAADCLRHPWL 386
ML ++ R +AA L H +
Sbjct: 283 KMLVLDSDKRITAAQALAHAYF 304
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 3e-30
Identities = 59/370 (15%), Positives = 112/370 (30%), Gaps = 119/370 (32%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK---SDQVYADTARDEIVLLKAVGRKSN 86
Y V+ +G G + D + K + + E+ LL+ +
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL----- 60
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHI--Q 143
++R + R T + +V E G +L +I + + ++ +
Sbjct: 61 ---------KHPNIVRYYDRI--IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 109
Query: 144 NVRTIIKQVLEGLNYLHTQC----RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
V ++ Q+ L H + ++H D+KP N+ + +
Sbjct: 110 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN----------------- 152
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFA---DEIQTRQYRSVEVL 256
VK+ D G A ++ + + T Y S E +
Sbjct: 153 --------------------------VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 186
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
Y +DIWS C+ +EL F KE+ +
Sbjct: 187 NRMSYNEKSDIWSLGCLLYELCALMPPFT---------------------AFSQKELAGK 225
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
++ G FRRI Y +S + + + ML++ R S
Sbjct: 226 IRE--------GKFRRIP--------------YRYSD----ELNEIITRMLNLKDYHRPS 259
Query: 377 AADCLRHPWL 386
+ L +P +
Sbjct: 260 VEEILENPLI 269
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 114 bits (286), Expect = 5e-30
Identities = 65/370 (17%), Positives = 116/370 (31%), Gaps = 106/370 (28%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
F Y LG G S V A+KI+ + +A + L +A ++
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 60
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQN 144
++ +I+L + + T +VF++M L + + +
Sbjct: 61 DILRKVSG---HPNIIQLKDTY----ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKE 111
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
R I++ +LE + LH + I+H D+KPENIL+ D +
Sbjct: 112 TRKIMRALLEVICALH-KLNIVHRDLKPENILLDDDMN---------------------- 148
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGA--- 259
+K+ D G +C +D + + T Y + E++ +
Sbjct: 149 ---------------------IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 187
Query: 260 ---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
GYG D+WST + + L G F + + L I+
Sbjct: 188 NHPGYGKEVDMWSTGVIMYTLLAGSPPFW------HRKQMLMLRMIMSGNYQFGSPEWD- 240
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
+S D + L V + R +
Sbjct: 241 ---------------------------------DYSD----TVKDLVSRFLVVQPQKRYT 263
Query: 377 AADCLRHPWL 386
A + L HP+
Sbjct: 264 AEEALAHPFF 273
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (284), Expect = 1e-29
Identities = 61/367 (16%), Positives = 109/367 (29%), Gaps = 116/367 (31%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV--YADTARDEIVLLKAVGRKSN 86
+ +++ LG G + V L+ + + VA+KIV + + + EI + K +
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN---- 61
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVR 146
E V++ R G + E L D G+ + +
Sbjct: 62 ----------HENVVKFYGHR----REGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQ 106
Query: 147 TIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLD 206
Q++ G+ YLH I H DIKPEN+L+ +
Sbjct: 107 RFFHQLMAGVVYLH-GIGITHRDIKPENLLLDERDN------------------------ 141
Query: 207 STMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVEVLIGAGY 261
+KI+D G A + + + T Y + E+L +
Sbjct: 142 -------------------LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 262 -GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKT 320
D+WS + + G+ +D + S + E +
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWD-----QPSDSCQEYSDWKEKKTYLNP--------- 228
Query: 321 LRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC 380
+++ID S L +L N R + D
Sbjct: 229 ---------WKKID----------------------SAPLALLHKILVENPSARITIPDI 257
Query: 381 LRHPWLN 387
+ W N
Sbjct: 258 KKDRWYN 264
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 113 bits (283), Expect = 2e-29
Identities = 73/365 (20%), Positives = 129/365 (35%), Gaps = 90/365 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIV---KSDQVYADTARDEIVLLKAVGRKS 85
+YH + K+G G + V+ + + ALK + K D+ T EI +LK +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKEL---- 57
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+++L + + +VFE + +L +L+ + G+
Sbjct: 58 ----------KHSNIVKLYDVI----HTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTA 102
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
++ + Q+L G+ Y H R++H D+KP+N+L+ + +
Sbjct: 103 KSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGE----------------------- 138
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAG-Y 261
+KIAD G A + EI T YR+ +VL+G+ Y
Sbjct: 139 --------------------LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
DIWS C+ E+ G LF + D L I ++G + +
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGV------SEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL 381
+Y + + K D L ML ++ R +A L
Sbjct: 233 KYDPNFTVYEPLPWESFL-------------KGLDESGIDLLSKMLKLDPNQRITAKQAL 279
Query: 382 RHPWL 386
H +
Sbjct: 280 EHAYF 284
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 112 bits (280), Expect = 1e-28
Identities = 57/361 (15%), Positives = 105/361 (29%), Gaps = 109/361 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ +R++G G F V+ + D+++ VA+K + ++ +I+ +K
Sbjct: 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-- 73
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
I+ +V E + L+ K + + +
Sbjct: 74 --------HPNTIQYRG----CYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAV 120
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
L+GL YLH+ +IH D+K NIL+
Sbjct: 121 THGALQGLAYLHSH-NMIHRDVKAGNILLSEPGL-------------------------- 153
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAG---YGPAA 265
VK+ D G+A + + T + + EV++ Y
Sbjct: 154 -----------------VKLGDFGSASIMAPAN-SFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
D+WS ELA L HI + P +
Sbjct: 196 DVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNESPALQS------------- 236
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPW 385
HWS+ F +F+ L + R ++ L+H +
Sbjct: 237 -----------------------GHWSE----YFRNFVDSCLQKIPQDRPTSEVLLKHRF 269
Query: 386 L 386
+
Sbjct: 270 V 270
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 111 bits (277), Expect = 2e-28
Identities = 48/294 (16%), Positives = 97/294 (32%), Gaps = 51/294 (17%)
Query: 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGR 83
++ Y V R++G G F ++ +L + VA+K A RDE K +
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAG 59
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
+ + + + + G H +V +++G +L L+ + ++
Sbjct: 60 CTGI-----------------PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVK 101
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
V KQ+L + +H + +++ DIKP+N L+ K M
Sbjct: 102 TVAMAAKQMLARVQSIH-EKSLVYRDIKPDNFLIGRPNSKNANMIY-------------- 146
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGP 263
+ DF ++ + + + T +Y S+ +G
Sbjct: 147 -----VVDFGMVKFYRD---------PVTKQHIPYREKKNLSGTARYMSINTHLGREQSR 192
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQG 317
D+ + + G + G + + + I E P L G
Sbjct: 193 RDDLEALGHVFMYFLRGSLPWQ---GLKAATNKQKYERIGEKKQSTPLRELCAG 243
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 1e-27
Identities = 57/371 (15%), Positives = 107/371 (28%), Gaps = 120/371 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ + LG G FSTV L+ +L A+KI++ + + + + V + +
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-- 66
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRT 147
++L F ++ + LL+ I + R
Sbjct: 67 --------HPFFVKLYFTF----QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 112
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+++ L YLH + IIH D+KPENIL+ D
Sbjct: 113 YTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMH------------------------- 146
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQT-----RQYRSVEVLIGAGYG 262
++I D G A + QY S E+L
Sbjct: 147 ------------------IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 188
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
++D+W+ C+ ++L G F + I++L P++ + +
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFRAG------NEYLIFQKIIKLEYDFPEKFFPKAR---- 238
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC-- 380
D + +L ++ R +
Sbjct: 239 --------------------------------------DLVEKLLVLDATKRLGCEEMEG 260
Query: 381 ----LRHPWLN 387
HP+
Sbjct: 261 YGPLKAHPFFE 271
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 1e-27
Identities = 68/363 (18%), Positives = 121/363 (33%), Gaps = 98/363 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
Y +LG G F+ V + A K +K + + V + + R+ ++
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS---RRGVSREDIEREVSIL 67
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
VI L + N T + ++ E++ L ++ + + +
Sbjct: 68 KEI----QHPNVITLHEVY----ENKTDVILILELVAGGELFDF-LAEKESLTEEEATEF 118
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+KQ+L G+ YLH+ I H D+KPENI++
Sbjct: 119 LKQILNGVYYLHSLQ-IAHFDLKPENIMLLDR---------------------------- 149
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGYGPAAD 266
V +KI D G A ID + F + T ++ + E++ G AD
Sbjct: 150 -----------NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326
+WS + + L +G F + LA++ + E S
Sbjct: 199 MWSIGVITYILLSGASPFLGD------TKQETLANVSAVNYEFEDEYFS----------- 241
Query: 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386
+ S DF+ +L + K R + D L+HPW+
Sbjct: 242 -----------------------NTSA----LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
Query: 387 NPR 389
P+
Sbjct: 275 KPK 277
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 108 bits (269), Expect = 2e-27
Identities = 43/272 (15%), Positives = 83/272 (30%), Gaps = 54/272 (19%)
Query: 20 VQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLK 79
+++G+ RY + RK+G G F ++L D+ VA+K+ + E + K
Sbjct: 3 LRVGN----RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYK 57
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKG 139
+ + + + G + MV E++G +L L +
Sbjct: 58 MMQGGVGIPT-----------------IRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RK 99
Query: 140 IHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
++ V + Q++ + Y+H IH D+KP+N LM + D K
Sbjct: 100 FSLKTVLLLADQMISRIEYIH-SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA 259
+ + T +Y S+ +G
Sbjct: 159 ------------------------------ARTHQHIPYRENKNLTGTARYASINTHLGI 188
Query: 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKE 291
D+ S + G +
Sbjct: 189 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 220
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 107 bits (269), Expect = 3e-27
Identities = 65/363 (17%), Positives = 112/363 (30%), Gaps = 110/363 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGRKSN 86
Y LG G FS V L+ D + + VA+K + + +EI +L +
Sbjct: 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI----- 64
Query: 87 VHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNV 145
++ L + + +G H+ ++ +++ G L I ++
Sbjct: 65 ---------KHPNIVALDDIY----ESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDA 109
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+I QVL+ + YLH I+H D+KPEN+L +
Sbjct: 110 SRLIFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDE----------------------- 145
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYGP 263
D + I+D G + D + T Y + EVL Y
Sbjct: 146 -----------------DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 188
Query: 264 AADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRY 323
A D WS +A+ L G F + D I++
Sbjct: 189 AVDCWSIGVIAYILLCGYPPFYDE------NDAKLFEQILKAEYEFDSPYWD-------- 234
Query: 324 FTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
S DF+ ++ + + R + L+H
Sbjct: 235 --------------------------DISD----SAKDFIRHLMEKDPEKRFTCEQALQH 264
Query: 384 PWL 386
PW+
Sbjct: 265 PWI 267
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 3e-26
Identities = 67/370 (18%), Positives = 114/370 (30%), Gaps = 122/370 (32%)
Query: 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLL 78
+Y V LG G F +V+ + D VA+K V+ D++ E+VLL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 79 KAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYK 138
K V S+ S VIRLL+ F ++ E ++
Sbjct: 62 KKV---SSGFSG---------VIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG 105
Query: 139 GIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIG 198
+ + R+ QVLE + + H ++H DIK ENIL+ ++
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLN------------------ 146
Query: 199 MKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-TRQYRSVEVLI 257
+K+ D G+ + D + TR Y E +
Sbjct: 147 ------------------------RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 258 GAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316
Y G +A +WS + +++ GD F +H I+ + V
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPF------------EHDEEIIRGQVFFRQRV--- 227
Query: 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS 376
+S+ + L + R +
Sbjct: 228 ---------------------------------------SSECQHLIRWCLALRPSDRPT 248
Query: 377 AADCLRHPWL 386
+ HPW+
Sbjct: 249 FEEIQNHPWM 258
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 102 bits (254), Expect = 2e-25
Identities = 67/376 (17%), Positives = 112/376 (29%), Gaps = 105/376 (27%)
Query: 19 PVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVK----SDQVYADTARDE 74
P + D RY + LG+G S V L+ DL+ VA+K+++ D + R E
Sbjct: 2 PSHLSD----RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 57
Query: 75 IVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIAR 134
A+ ++ + + + + G +V E + LR I
Sbjct: 58 AQNAAALN--------------HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH 103
Query: 135 SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKH 194
+ + +I + LN+ H IIH D+KP NI+ +
Sbjct: 104 -TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIM-------ISATNAVKVMD 154
Query: 195 HKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVE 254
I + S +S ++ I T QY S E
Sbjct: 155 FGIARAIADSGNSVTQTAAV------------------------------IGTAQYLSPE 184
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
G +D++S C+ +E+ TG+ F +A+ PIP
Sbjct: 185 QARGDSVDARSDVYSLGCVLYEVLTGEPPF-------TGDSPVSVAYQHVREDPIPPSAR 237
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
+G S D +L L N + R
Sbjct: 238 HEG---------------------------------LSA----DLDAVVLKALAKNPENR 260
Query: 375 ASAADCLRHPWLNPRR 390
A +R +
Sbjct: 261 YQTAAEMRADLVRVHN 276
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 101 bits (253), Expect = 5e-25
Identities = 64/366 (17%), Positives = 108/366 (29%), Gaps = 120/366 (32%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKS 85
+ ++R LG G F V L + + A+K++K + V + DE ++L V
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--- 62
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+IR+ F ++ I M+ + + L + R +
Sbjct: 63 -----------HPFIIRMWGTF----QDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVA 106
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
+ +V L YLH++ II+ D+KPENIL L
Sbjct: 107 KFYAAEVCLALEYLHSKD-IIYRDLKPENIL----------------------------L 137
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAA 265
D +KI D G A ++ D T Y + EV+ Y +
Sbjct: 138 DKNG---------------HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSI 182
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
D WS + +E+ G F +
Sbjct: 183 DWWSFGILIYEMLAGYTPFY---------------------DSNTMKT------------ 209
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR-----ASAADC 380
++L + + D D L ++ + R D
Sbjct: 210 ---------------YEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 254
Query: 381 LRHPWL 386
HPW
Sbjct: 255 KNHPWF 260
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 6e-25
Identities = 61/363 (16%), Positives = 110/363 (30%), Gaps = 110/363 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ + + LG G F V+L+ + F A+K +K D V D + ++ K V + H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ + F ++ M + + G +L+ I +
Sbjct: 63 ---------PFLTHMFCTF--QTKENLFFVMEY-LNGGDLMYHIQSC--HKFDLSRATFY 108
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+++ GL +LH I++ D+K +NIL+ D
Sbjct: 109 AAEIILGLQFLH-SKGIVYRDLKLDNILLDKDGHI------------------------- 142
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWI---DDHFADEIQTRQYRSVEVLIGAGYGPAA 265
KIAD G D T Y + E+L+G Y +
Sbjct: 143 ------------------KIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSV 184
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
D WS + +E+ G F + +D++ L H + + P L +
Sbjct: 185 DWWSFGVLLYEMLIGQSPF-------HGQDEEELFHSIRMDNPFYPRWLEK--------- 228
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA-DCLRHP 384
+ D L+ + + R D +HP
Sbjct: 229 --------------------------------EAKDLLVKLFVREPEKRLGVRGDIRQHP 256
Query: 385 WLN 387
Sbjct: 257 LFR 259
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 100 bits (249), Expect = 4e-24
Identities = 58/371 (15%), Positives = 103/371 (27%), Gaps = 116/371 (31%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRK 84
+ V R +G G F V+ A+K + ++ A +E ++L V
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
++ + F + + ++M L + +
Sbjct: 65 DCPF-----------IVCMSYAF----HTPDKLSFILDLMNGGDLHYHLS-QHGVFSEAD 108
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
+R +++ GL ++H + +++ D+KP NIL
Sbjct: 109 MRFYAAEIILGLEHMHNRF-VVYRDLKPANIL---------------------------- 139
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-TRQYRSVEVLI-GAGYG 262
LD V+I+DLG AC T Y + EVL G Y
Sbjct: 140 LDEHG---------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYD 184
Query: 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLR 322
+AD +S CM F+L G F
Sbjct: 185 SSADWFSLGCMLFKLLRGHSPFR------------------------------------- 207
Query: 323 YFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----A 377
Q + + L + +S + L +L + R A
Sbjct: 208 ----QHKTKDKHEIDRMTLTMAVELPDSFSP----ELRSLLEGLLQRDVNRRLGCLGRGA 259
Query: 378 ADCLRHPWLNP 388
+ P+
Sbjct: 260 QEVKESPFFRS 270
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.0 bits (241), Expect = 1e-23
Identities = 43/356 (12%), Positives = 92/356 (25%), Gaps = 111/356 (31%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+++ +G G F V L VA+K +K+D E ++ +
Sbjct: 8 ELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-EASVMTQL------- 57
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRT 147
+++LL + + +V E M +L+ + + +
Sbjct: 58 -------RHSNLVQLLG---VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 107
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
V E + YL +H D+ N+L+ D
Sbjct: 108 FSLDVCEAMEYLE-GNNFVHRDLAARNVLVSEDN-------------------------- 140
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADI 267
K++D G ++ + E L + +D+
Sbjct: 141 -----------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 183
Query: 268 WSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQ 327
WS + +E+ + + P K+V+ + +K + P
Sbjct: 184 WSFGILLWEIYSFGRVPYP--------------------RIPLKDVVPRVEKGYKMDAPD 223
Query: 328 GNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
+ + H++ +R S
Sbjct: 224 ----------------------GCPP----AVYEVMKNCWHLDAAMRPSFLQLREQ 253
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 94.9 bits (235), Expect = 2e-22
Identities = 58/367 (15%), Positives = 103/367 (28%), Gaps = 120/367 (32%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRK 84
++ I+ LG G F V L + A+KI+ +V + +E +L+AV
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQN 144
V + ++ +++ MV E + + +
Sbjct: 102 FLVK------------------LEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPH 142
Query: 145 VRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMS 204
R Q++ YLH +I+ D+KPEN+L+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY---------------------- 179
Query: 205 LDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPA 264
+++ D G A + T + + E+++ GY A
Sbjct: 180 ---------------------IQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKA 218
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
D W+ + +E+A G F + IV P
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFAD------QPIQIYEKIVSGKVRFPSHF----------- 261
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVN-----QKLRASAAD 379
+SD D L +L V+ L+ D
Sbjct: 262 -------------------------------SSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 380 CLRHPWL 386
H W
Sbjct: 291 IKNHKWF 297
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.2 bits (228), Expect = 2e-21
Identities = 57/365 (15%), Positives = 104/365 (28%), Gaps = 115/365 (31%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ ++ LG G F V L + + A+KI++ + + A V V + +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR--- 63
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+ L K + +C V E L + + R
Sbjct: 64 -------HPFLTAL----KYAFQTHDRLCFVMEYANGGELFFHLSRERV-FTEERARFYG 111
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
+++ L YLH +++ DIK EN+++ D
Sbjct: 112 AEIVSALEYLH-SRDVVYRDIKLENLMLDKDGH--------------------------- 143
Query: 210 SDFSLLDPANEVYDISVKIADLGNA---CWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266
+KI D G T +Y + EVL YG A D
Sbjct: 144 ----------------IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 187
Query: 267 IWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326
W + +E+ G F Y++D + L
Sbjct: 188 WWGLGVVMYEMMCGRLPF-------YNQDHERL--------------------------- 213
Query: 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR-----ASAADCL 381
+L E+ + + + + L +L + K R + A + +
Sbjct: 214 --------------FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 382 RHPWL 386
H +
Sbjct: 260 EHRFF 264
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.1 bits (223), Expect = 3e-21
Identities = 51/359 (14%), Positives = 104/359 (28%), Gaps = 113/359 (31%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++++G G F V L + L +K VA+K ++ + + +E ++ +
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS------ 58
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
K+++L IC+VFE M + L R+ + + +
Sbjct: 59 --------HPKLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 106
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
V EG+ YL C +IH D+ N L+ +
Sbjct: 107 CLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQV-------------------------- 139
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ----TRQYRSVEVLIGAGYGPA 264
+K++D G ++ D ++ S EV + Y
Sbjct: 140 -----------------IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
+D+WS + +E+ + + EV+ R +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYE--------------------NRSNSEVVEDISTGFRLY 222
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
P+ ++ + + R + + LR
Sbjct: 223 KPRL--------------------------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.4 bits (221), Expect = 8e-21
Identities = 56/371 (15%), Positives = 107/371 (28%), Gaps = 115/371 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ KLG G F VW+ T VA+K +K + + E ++K +
Sbjct: 18 SLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------ 70
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
EK+++L + + S +I + + +LL + K + + + +
Sbjct: 71 --------HEKLVQL---YAVVSEEPIYIVTEY-MSKGSLLDFLKGETGKYLRLPQLVDM 118
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
Q+ G+ Y+ +H D++ NIL+ +
Sbjct: 119 AAQIASGMAYVERMN-YVHRDLRAANILVGENLV-------------------------- 151
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ----TRQYRSVEVLIGAGYGPA 264
K+AD G A I+D+ Q ++ + E + +
Sbjct: 152 -----------------CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 194
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324
+D+WS + EL T + P G + +EVL Q ++ R
Sbjct: 195 SDVWSFGILLTELTTKGRVPYP--------------------GMVNREVLDQVERGYRMP 234
Query: 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR-- 382
P D + + R +
Sbjct: 235 CPPE--------------------------CPESLHDLMCQCWRKEPEERPTFEYLQAFL 268
Query: 383 HPWLNPRRSHY 393
+ Y
Sbjct: 269 EDYFTSTEPQY 279
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.7 bits (209), Expect = 2e-19
Identities = 46/263 (17%), Positives = 89/263 (33%), Gaps = 69/263 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
++ +LG G F VW+ + T VA+K +K + D E L+K +
Sbjct: 14 TLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL------- 65
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRT 147
++++RL I ++ E M +L+ + + I +
Sbjct: 66 -------QHQRLVRLYAVV-----TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 148 IIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDS 207
+ Q+ EG+ ++ + IH D++ NIL+
Sbjct: 114 MAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSC------------------------ 148
Query: 208 TMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ----TRQYRSVEVLIGAGYGP 263
KIAD G A I+D+ + ++ + E + +
Sbjct: 149 -------------------KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 264 AADIWSTACMAFELATGDYLFDP 286
+D+WS + E+ T + P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYP 212
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.9 bits (207), Expect = 6e-19
Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 77/268 (28%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD---EIVLLKAVGRKS 85
+ V +++G G F TV+ + VA+K++ + E+ +L+ +
Sbjct: 9 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ Y+T + +V + + L + +
Sbjct: 66 ILLFMGYST-------------------APQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 106
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
I +Q +G++YLH + IIH D+K NI L
Sbjct: 107 IDIARQTAQGMDYLHAKS-IIHRDLKSNNIF----------------------------L 137
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADE-----IQTRQYRSVEVLIGAG 260
D++VKI D G A + + + EV+
Sbjct: 138 HE---------------DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 261 ---YGPAADIWSTACMAFELATGDYLFD 285
Y +D+++ + +EL TG +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYS 210
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 83.6 bits (206), Expect = 9e-19
Identities = 46/300 (15%), Positives = 92/300 (30%), Gaps = 73/300 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ KLG G + V+ + VA+K +K D + + E ++K +
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI------- 70
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+++LL +I F G NLL + + + + + +
Sbjct: 71 -------KHPNLVQLLGVC--TREPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYM 120
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
Q+ + YL + IH D+ N L +
Sbjct: 121 ATQISSAMEYLE-KKNFIHRDLAARNCL----------------------------VGEN 151
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGYGPA 264
VK+AD G + + A ++ + E L +
Sbjct: 152 H---------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 265 ADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE--LVGPIPKEVLSQGKKTLR 322
+D+W+ + +E+AT P D + ++E P+ + + +R
Sbjct: 197 SDVWAFGVLLWEIATYGMSPYP------GIDLSQVYELLEKDYRMERPEGCPEKVYELMR 250
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.0 bits (202), Expect = 2e-18
Identities = 48/358 (13%), Positives = 99/358 (27%), Gaps = 113/358 (31%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+++LG G F V + + VA+K++K + D +E ++ +
Sbjct: 6 LTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-------- 56
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+ EK+++L I ++ E M L R Q + +
Sbjct: 57 ------SHEKLVQLYG----VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
K V E + YL ++ +H D+ N L ++
Sbjct: 107 KDVCEAMEYLESKQ-FLHRDLAARNCL----------------------------VNDQG 137
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVEVLIGAGYGPAA 265
VK++D G + ++ D ++ EVL+ + + +
Sbjct: 138 ---------------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 266 DIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325
DIW+ + +E+ + + E + LR +
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE--------------------RFTNSETAEHIAQGLRLYR 222
Query: 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383
P + + H R + L +
Sbjct: 223 PHL--------------------------ASEKVYTIMYSCWHEKADERPTFKILLSN 254
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.4 bits (200), Expect = 8e-18
Identities = 54/378 (14%), Positives = 112/378 (29%), Gaps = 125/378 (33%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK---TFVALKIVKSDQV-----YADTARDEIVLLKA 80
+ +++ LG G + V+L + A+K++K + + R E +L+
Sbjct: 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84
Query: 81 VGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGI 140
+ + ++ L F + T + ++ + + L +
Sbjct: 85 IRQSPF-------------LVTLHYAF----QTETKLHLILDYINGGELFTHLSQRER-F 126
Query: 141 HIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
V+ + +++ L +LH II+ DIK ENIL+ +
Sbjct: 127 TEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGH------------------ 167
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ----YRSVEVL 256
V + D G + + Y + +++
Sbjct: 168 -------------------------VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 202
Query: 257 IG--AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
G +G+ A D WS + +EL TG F E + + I++ P P+E+
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD--GEKNSQAEISRRILKSEPPYPQEM- 259
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
++ D + +L + K R
Sbjct: 260 -----------------------------------------SALAKDLIQRLLMKDPKKR 278
Query: 375 AS-----AADCLRHPWLN 387
A + H +
Sbjct: 279 LGCGPRDADEIKEHLFFQ 296
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.7 bits (198), Expect = 1e-17
Identities = 51/368 (13%), Positives = 99/368 (26%), Gaps = 95/368 (25%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVH 88
+ +G G F VW VA+KI S + + EI + R N+
Sbjct: 4 TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVML-RHENI- 59
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRT 147
+ + + T + +V + +L + R + ++ +
Sbjct: 60 ------------LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIK 104
Query: 148 IIKQVLEGLNYLHTQC-------RIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMK 200
+ GL +LH + I H D+K +NIL+ I
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV------------KKNGTCCI--- 149
Query: 201 LPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGA- 259
+D L + D ID + T++Y + EVL +
Sbjct: 150 ---------ADLGLAVRHDSATD------------TIDIAPNHRVGTKRYMAPEVLDDSI 188
Query: 260 -----GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
ADI++ + +E+A + + D +
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP------------ 236
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
+ + + + S A + + N R
Sbjct: 237 --------------SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 282
Query: 375 ASAADCLR 382
+A +
Sbjct: 283 LTALRIKK 290
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 79.9 bits (196), Expect = 2e-17
Identities = 36/269 (13%), Positives = 73/269 (27%), Gaps = 61/269 (22%)
Query: 29 RYHVIRKLGWGHFSTVWL-----SWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAV 81
+R +G G F V+ + T VA+K++K + + E L+
Sbjct: 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73
Query: 82 GRKSNVHSSAYNTQASEKVIRLL-----NDFKIYSRNGTHICMVFEVMGYNLLRLIARSD 136
+ V + + + H + ++
Sbjct: 74 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 133
Query: 137 YKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHK 196
+ I +QV G+ YL + + +H D+ N L+ +
Sbjct: 134 PPPLSCAEQLCIARQVAAGMAYLS-ERKFVHRDLATRNCLVGENMV-------------- 178
Query: 197 IGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ-----YR 251
VKIAD G + I + +
Sbjct: 179 -----------------------------VKIADFGLSRNIYSADYYKADGNDAIPIRWM 209
Query: 252 SVEVLIGAGYGPAADIWSTACMAFELATG 280
E + Y +D+W+ + +E+ +
Sbjct: 210 PPESIFYNRYTTESDVWAYGVVLWEIFSY 238
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 77.1 bits (189), Expect = 2e-16
Identities = 39/264 (14%), Positives = 80/264 (30%), Gaps = 75/264 (28%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSDQVYADTAR--DEIVLLKAVGR 83
+ + +G G F V + + FVA+K +KS E ++
Sbjct: 27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-- 84
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
VI L T + ++ E M L R + +
Sbjct: 85 ------------DHPNVIHLEGVV----TKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 128
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
+ +++ + G+ YL +H D+ NIL+ +
Sbjct: 129 QLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLV--------------------- 166
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQ--------YRSVEV 255
K++D G + +++D +D T + + E
Sbjct: 167 ----------------------CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 204
Query: 256 LIGAGYGPAADIWSTACMAFELAT 279
+ + A+D+WS + +E+ +
Sbjct: 205 IQYRKFTSASDVWSYGIVMWEVMS 228
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.3 bits (184), Expect = 7e-16
Identities = 45/269 (16%), Positives = 88/269 (32%), Gaps = 54/269 (20%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDL-------QDKTFVALKIVKSDQVYADTAR--DEIVLLK 79
R + + LG G F V L+ + T VA+K++KSD D + E+ ++K
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 80 AVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGT--HICMVFEVMGYNLLRLIARSDY 137
+G+ N+ + + ++ Y+ G G + +
Sbjct: 74 MIGKHKNIINLLGACTQDGPLYVIVE----YASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 138 KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKI 197
+ + +++ + QV G+ YL + IH D+ N+L+ D KI
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLA-SKKCIHRDLAARNVLVTEDN------------VMKI 176
Query: 198 GMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLI 257
+A + + ++ + E L
Sbjct: 177 AD--------------------------FGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 210
Query: 258 GAGYGPAADIWSTACMAFELATGDYLFDP 286
Y +D+WS + +E+ T P
Sbjct: 211 DRIYTHQSDVWSFGVLLWEIFTLGGSPYP 239
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.0 bits (181), Expect = 2e-15
Identities = 42/281 (14%), Positives = 80/281 (28%), Gaps = 85/281 (30%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK-----TFVALKIVK--SDQVYADTARDEIVLLKAV 81
+ LG G F V + VA+K++K +D + E+ ++ +
Sbjct: 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL------------ 129
G N+ + LL I ++FE Y L
Sbjct: 98 GSHENI-------------VNLLG----ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFS 140
Query: 130 ----------RLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179
RL D + +++ QV +G+ +L +H D+ N+L+
Sbjct: 141 EDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE-FKSCVHRDLAARNVLVTH 199
Query: 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD 239
+ DF L + V+
Sbjct: 200 GK------------------------VVKICDFGLARDIMSDSNYVVRGNARL------- 228
Query: 240 HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATG 280
++ + E L Y +D+WS + +E+ +
Sbjct: 229 -------PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 262
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.2 bits (179), Expect = 3e-15
Identities = 42/263 (15%), Positives = 90/263 (34%), Gaps = 62/263 (23%)
Query: 34 RKLGWGHFSTVWLSWD--LQDKTFVALKIVK--SDQVYADTARDEIVLLKAVGRKSNVHS 89
+LG G+F +V + + VA+K++K +++ + E ++ +
Sbjct: 15 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD------- 67
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+ ++RL+ + + +V E+ G L + I + NV ++
Sbjct: 68 -------NPYIVRLIGVCQ-----AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 115
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
QV G+ YL + +H D+ N+L+ + + +
Sbjct: 116 HQVSMGMKYLEEK-NFVHRDLAARNVLLVNRH------------------------YAKI 150
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIWS 269
SDF L + + W ++ + E + + +D+WS
Sbjct: 151 SDFGL---SKALGADDSYYTARSAGKW----------PLKWYAPECINFRKFSSRSDVWS 197
Query: 270 TACMAFE-LATGDYLFDPKAGKE 291
+E L+ G + G E
Sbjct: 198 YGVTMWEALSYGQKPYKKMKGPE 220
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.5 bits (177), Expect = 6e-15
Identities = 38/206 (18%), Positives = 65/206 (31%), Gaps = 49/206 (23%)
Query: 29 RYHVIRKLGWGHFSTVWL-----SWDLQDKTFVALKIVK--SDQVYADTARDEIVLLKAV 81
R + LG G F V VA+K++K + + E+ +L +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGI 140
G N+ + LL G ++ E +LL + R I
Sbjct: 84 GNHMNI-------------VNLLG----ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 126
Query: 141 HIQN----------------VRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL-------M 177
+ + + QV +G+ +L IH D+ NIL
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-SKNCIHRDLAARNILLTHGRITK 185
Query: 178 CVDYDKVRRMARDATKHHKIGMKLPM 203
D+ R + D+ K +LP+
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPV 211
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.5 bits (177), Expect = 6e-15
Identities = 47/272 (17%), Positives = 91/272 (33%), Gaps = 73/272 (26%)
Query: 27 NFRYHVIRKLGWGHFSTVWLSWDLQD---KTFVALKIVK--SDQVYADTARDEIVLLKAV 81
+ H +G GHF V+ L + K A+K + +D E +++K
Sbjct: 26 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
+ V+ LL I R+ +V M + LR R++
Sbjct: 86 --------------SHPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 128
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
++++ QV +G+ +L ++ + +H D+ N ++
Sbjct: 129 VKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLD----------------------- 164
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-------TRQYRSVE 254
+VK+AD G A + D D + ++ ++E
Sbjct: 165 --------------------EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 204
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDP 286
L + +D+WS + +EL T P
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (172), Expect = 2e-14
Identities = 48/305 (15%), Positives = 85/305 (27%), Gaps = 69/305 (22%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK---TFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85
++ KLG G F V VA+K +K D + A D+ +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 86 NVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNV 145
+ +IRL + MV E+ L R + +
Sbjct: 69 D----------HRNLIRLYGVVL-----TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 146 RTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSL 205
QV EG+ YL ++ IH D+ N+L+
Sbjct: 114 SRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDL----------------------- 149
Query: 206 DSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ------TRQYRSVEVLIGA 259
VKI D G + + + + + E L
Sbjct: 150 --------------------VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 260 GYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGK 318
+ A+D W +E+ T G + G + D + P+++ +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMV 249
Query: 319 KTLRY 323
+ +
Sbjct: 250 QCWAH 254
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (172), Expect = 2e-14
Identities = 36/261 (13%), Positives = 78/261 (29%), Gaps = 72/261 (27%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDK---TFVALKIVK--SDQVYADTARDEIVLLKAVGR 83
R + R +G G F V + + VA+K K + + E + ++
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD- 66
Query: 84 KSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQ 143
+++L+ + ++ E+ LR + + +
Sbjct: 67 -------------HPHIVKLIGVI-----TENPVWIIMELCTLGELRSFLQVRKYSLDLA 108
Query: 144 NVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPM 203
++ Q+ L YL R +H DI N+L
Sbjct: 109 SLILYAYQLSTALAYLE-SKRFVHRDIAARNVL--------------------------- 140
Query: 204 SLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ----TRQYRSVEVLIGA 259
+ S VK+ D G + +++D + ++ + E +
Sbjct: 141 -VSSND---------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 260 GYGPAADIWSTACMAFELATG 280
+ A+D+W +E+
Sbjct: 185 RFTSASDVWMFGVCMWEILMH 205
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (172), Expect = 3e-14
Identities = 43/277 (15%), Positives = 85/277 (30%), Gaps = 82/277 (29%)
Query: 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARD----EIVLLKAVGRK 84
+G G+F V + +D + I + + + E+ +L +G
Sbjct: 11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 70
Query: 85 SNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDY------ 137
N +I LL + + ++ + E NLL + +S
Sbjct: 71 PN-------------IINLLGACE----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 113
Query: 138 --------KGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMAR 189
+ Q + V G++YL Q + IH D+ NIL+ +Y
Sbjct: 114 FAIANSTASTLSSQQLLHFAADVARGMDYLS-QKQFIHRDLAARNILVGENYV------- 165
Query: 190 DATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ--T 247
KIAD G + + + +
Sbjct: 166 ------------------------------------AKIADFGLSRGQEVYVKKTMGRLP 189
Query: 248 RQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLF 284
++ ++E L + Y +D+WS + +E+ +
Sbjct: 190 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 226
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.0 bits (168), Expect = 7e-14
Identities = 50/369 (13%), Positives = 105/369 (28%), Gaps = 126/369 (34%)
Query: 34 RKLGWGHFSTVWLSWDLQDKT--FVALKIVK---SDQVYADTARDEIVLLKAVGRKSNVH 88
++LG G+F TV + K VA+KI+K +D D E +++ +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD------ 66
Query: 89 SSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTI 148
+ ++R++ + +V E+ L + + +N+ +
Sbjct: 67 --------NPYIVRMIGICEA-----ESWMLVMEMAELGPLNKY-LQQNRHVKDKNIIEL 112
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ QV G+ YL +H D+ N+L+ +
Sbjct: 113 VHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHY-------------------------- 145
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ------TRQYRSVEVLIGAGYG 262
KI+D G + + ++ + E + +
Sbjct: 146 -----------------AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 263 PAADIWSTACMAFE-LATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL 321
+D+WS + +E + G + G EV + +K
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYR---------------------GMKGSEVTAMLEKGE 227
Query: 322 RYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD-- 379
R P + + D + + + R A
Sbjct: 228 RMGCPA----------------------GCPR----EMYDLMNLCWTYDVENRPGFAAVE 261
Query: 380 -CLRHPWLN 387
LR+ + +
Sbjct: 262 LRLRNYYYD 270
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.3 bits (166), Expect = 2e-13
Identities = 44/260 (16%), Positives = 85/260 (32%), Gaps = 62/260 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ I+ LG G F TV+ + + V + + + A + + +L ++V
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 69
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTII 149
+ V RLL + + ++ ++M + L R I Q +
Sbjct: 70 -------NPHVCRLLGICL-----TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 117
Query: 150 KQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTM 209
Q+ +G+NYL R++H D+ N+L+
Sbjct: 118 VQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQH--------------------------- 149
Query: 210 SDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVEVLIGAGYGPA 264
VKI D G A + + ++ ++E ++ Y
Sbjct: 150 ----------------VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 193
Query: 265 ADIWSTACMAFELATGDYLF 284
+D+WS +EL T
Sbjct: 194 SDVWSYGVTVWELMTFGSKP 213
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.4 bits (161), Expect = 5e-13
Identities = 36/307 (11%), Positives = 86/307 (28%), Gaps = 80/307 (26%)
Query: 29 RYHVIRKLGWGHFSTVWLSW----DLQDKTFVALKIVKSDQVYADTAR--DEIVLLKAVG 82
+ +G G F V+ + + VA+K +K+ E ++
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67
Query: 83 RKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHI 142
+ + + + ++ E M L R +
Sbjct: 68 HHNIIR------------------LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV 109
Query: 143 QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLP 202
+ +++ + G+ YL +H D+ NIL+ +
Sbjct: 110 LQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLV-------------------- 148
Query: 203 MSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ------TRQYRSVEVL 256
K++D G + ++D ++ + E +
Sbjct: 149 -----------------------CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 185
Query: 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVE-LVGPIPKEVLS 315
+ A+D+WS + +E+ T + + + + I + P P + S
Sbjct: 186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWE-----LSNHEVMKAINDGFRLPTPMDCPS 240
Query: 316 QGKKTLR 322
+ +
Sbjct: 241 AIYQLMM 247
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 63.3 bits (153), Expect = 2e-12
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 59/248 (23%)
Query: 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHS 89
+ + +G G S V+ + + +K K +++ +H
Sbjct: 2 DAIGKLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGD-------LHF 53
Query: 90 SAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLL-RLIARSDYKGIHIQNVRTI 148
S +++ R L G + V+ G +L LI + + ++N +
Sbjct: 54 SVLAIRSARNEFRALQKL-----QGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEV 108
Query: 149 IKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDST 208
+ +LE + + I+H D+ N+L
Sbjct: 109 LDMILEEVAKFY-HRGIVHGDLSQYNVL-------------------------------- 135
Query: 209 MSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAADIW 268
V + + I D + + + EI R R++ Y DI
Sbjct: 136 ------------VSEEGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDIN 183
Query: 269 STACMAFE 276
S +
Sbjct: 184 SAIDRILQ 191
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.6 bits (151), Expect = 1e-11
Identities = 51/369 (13%), Positives = 105/369 (28%), Gaps = 106/369 (28%)
Query: 29 RYHVIRKLGWGHFSTVWLSWD-----LQDKTFVALKIVKSDQVYADTAR--DEIVLLKAV 81
R + + LG G F V + VA+K++K +++ E+ +L +
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
G NV + + ++ + + + G + + +A D
Sbjct: 74 GHHLNVVNLLGACTKPGGPLMVIVE---FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130
Query: 142 I--QNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGM 199
+ +++ QV +G+ +L ++ + IH D+ NIL+
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNV----------------- 172
Query: 200 KLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ-----TRQYRSVE 254
VKI D G A I + ++ + E
Sbjct: 173 --------------------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL 314
+ Y +D+WS + +E+ + P I +E
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV-------------------KIDEEFC 247
Query: 315 SQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLR 374
+ K+ R P + +L H R
Sbjct: 248 RRLKEGTRMRAPDY--------------------------TTPEMYQTMLDCWHGEPSQR 281
Query: 375 ASAADCLRH 383
+ ++ + H
Sbjct: 282 PTFSELVEH 290
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.2 bits (150), Expect = 2e-11
Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 65/264 (24%)
Query: 29 RYHVIRKLGWGHFSTVWLSWD-----LQDKTFVALKIVK--SDQVYADTARDEIVLLKAV 81
+ + R+LG G F V+ + +T VA+K V + +E ++K
Sbjct: 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80
Query: 82 GRKSNVHSSAYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIH 141
V +Q ++ G + + +
Sbjct: 81 NCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRP----AMANNPVLAPPS 131
Query: 142 IQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKL 201
+ + + ++ +G+ YL+ + +H D+ N ++ D+
Sbjct: 132 LSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFT------------------- 171
Query: 202 PMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTR-----QYRSVEVL 256
VKI D G I + + ++ S E L
Sbjct: 172 ------------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 207
Query: 257 IGAGYGPAADIWSTACMAFELATG 280
+ +D+WS + +E+AT
Sbjct: 208 KDGVFTTYSDVWSFGVVLWEIATL 231
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 393 | |||
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.88 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.81 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.51 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.69 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.57 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.55 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.88 |
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-55 Score=397.44 Aligned_cols=254 Identities=23% Similarity=0.314 Sum_probs=206.6
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
-++|++.++||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++.+ .||||++++
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l--------------~HpnIv~~~ 69 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML--------------NHENVVKFY 69 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTC--------------CCTTBCCEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhC--------------CCCCEeeEe
Confidence 468999999999999999999999999999999987532 2346788999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+. +++.+++||||+ +|+|.+.+... ..+++.+++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 70 ~~~~----~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~~-- 140 (271)
T d1nvra_ 70 GHRR----EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERD-- 140 (271)
T ss_dssp EEEE----ETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTC--
T ss_pred eeec----cCceeEEEEeccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCCC--
Confidence 9998 567899999999 78998887543 4599999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||++..... .....+||+.|+|||++.+
T Consensus 141 -----------------------------------------~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~ 179 (271)
T d1nvra_ 141 -----------------------------------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179 (271)
T ss_dssp -----------------------------------------CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHC
T ss_pred -----------------------------------------CEEEccchhheeeccCCccccccceeeCcCccCHhHhcC
Confidence 499999999986532 2345679999999999998
Q ss_pred CCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 259 AGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 259 ~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
.++ +.++|||||||++|+|++|+.||...+... ............+
T Consensus 180 ~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~------~~~~~~~~~~~~~--------------------------- 226 (271)
T d1nvra_ 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------QEYSDWKEKKTYL--------------------------- 226 (271)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS------HHHHHHHTTCTTS---------------------------
T ss_pred CCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH------HHHHHHhcCCCCC---------------------------
Confidence 876 678999999999999999999997544211 1111111100000
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
......++.+.+||.+||+.||++|||++|+++||||+.-
T Consensus 227 ------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 227 ------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp ------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred ------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 0113456788899999999999999999999999999753
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-55 Score=398.90 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=214.1
Q ss_pred cCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 22 IGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.|+ ..++|++.++||+|+||.||+|++..+|+.||||++.... ...+.+.+|+.+++.+ .||||
T Consensus 15 ~~d-p~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l--------------~HpnI 79 (293)
T d1yhwa1 15 VGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN--------------KNPNI 79 (293)
T ss_dssp SSC-TTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC--------------CCTTB
T ss_pred CCC-cccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhC--------------CCCCE
Confidence 344 3568999999999999999999999999999999987543 3446688999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. ...++++||||+ +++|.+++... .+++.+++.++.||+.||+|||++ ||+||||||+|||++.
T Consensus 80 v~~~~~~~----~~~~~~ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~ 151 (293)
T d1yhwa1 80 VNYLDSYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGM 151 (293)
T ss_dssp CCEEEEEE----ETTEEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT
T ss_pred eeEeEEEE----ECCEEEEEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECC
Confidence 99999988 566799999999 78888877653 499999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHH
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVL 256 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~ 256 (393)
++ .+||+|||+++.... .....+||+.|+|||++
T Consensus 152 ~~-------------------------------------------~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~ 188 (293)
T d1yhwa1 152 DG-------------------------------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188 (293)
T ss_dssp TC-------------------------------------------CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHH
T ss_pred CC-------------------------------------------cEeeccchhheeeccccccccccccCCCccChhhh
Confidence 76 499999999987643 23456799999999999
Q ss_pred hcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 257 IGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 257 ~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
.+.+++.++|||||||++|+|++|+.||.+.+ ....+..+.....+
T Consensus 189 ~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~~~~~~~~---------------------------- 234 (293)
T d1yhwa1 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN------PLRALYLIATNGTP---------------------------- 234 (293)
T ss_dssp SSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHHCSC----------------------------
T ss_pred cCCCCCchhceehHhHHHHHHhhCCCCCCCCC------HHHHHHHHHhCCCC----------------------------
Confidence 99999999999999999999999999997554 33333333221110
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+...+..+.+||.+||..||.+|||++|+++||||+..
T Consensus 235 -----------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~ 276 (293)
T d1yhwa1 235 -----------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (293)
T ss_dssp -----------CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred -----------CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 011234566789999999999999999999999999999743
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-55 Score=392.77 Aligned_cols=249 Identities=24% Similarity=0.414 Sum_probs=211.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|++..+++.||+|++... ......+.+|+.+++.+ .||||+++
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l--------------~hpnIv~~ 71 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL--------------RHPNILRL 71 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC--------------CCTTBCCE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc--------------CCCCCCeE
Confidence 5799999999999999999999999999999998642 23346678899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++++. +...+++||||+ +|+|.+.+.... .+++.+++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 72 ~~~~~----~~~~~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~~- 143 (263)
T d2j4za1 72 YGYFH----DATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAG- 143 (263)
T ss_dssp EEEEE----CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTS-
T ss_pred EEEEE----ECCEEEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCCC-
Confidence 99998 677899999999 789999887653 489999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||++...... .....||+.|+|||++.+.++
T Consensus 144 ------------------------------------------~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~ 181 (263)
T d2j4za1 144 ------------------------------------------ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 181 (263)
T ss_dssp ------------------------------------------CEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCC
T ss_pred ------------------------------------------CEeecccceeeecCCCcccccCCCCcccCHHHHcCCCC
Confidence 4999999999866433 334578999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|+.||.+.+ ....+..+..
T Consensus 182 ~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~------------------------------------- 218 (263)
T d2j4za1 182 DEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISR------------------------------------- 218 (263)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHT-------------------------------------
T ss_pred CchhhhhhHhHHHHHHhcCCCCCCCCC------HHHHHHHHHc-------------------------------------
Confidence 999999999999999999999997544 2222222211
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....++...++.+.+||.+||+.||.+|||++|+++||||++
T Consensus 219 -----~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 219 -----VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp -----TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred -----CCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence 122234456778899999999999999999999999999964
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-54 Score=390.23 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=210.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
+.|++++.||+|+||.||+|++..+++.||||++... ....+.+.+|+.+|+.+ .||||+++++.
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~l~~~ 77 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--------------DHPNIVKLLDA 77 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC--------------CCCCCCeEEEE
Confidence 5799999999999999999999999999999998753 34457789999999999 89999999999
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ..+.+++||||+ +|+|..++.... ..+++.+++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 78 ~~----~~~~~~lvmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~~---- 147 (288)
T d2jfla1 78 FY----YENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDG---- 147 (288)
T ss_dssp EE----ETTEEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTS----
T ss_pred Ee----eCCeEEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCCC----
Confidence 87 567899999999 788888776543 4599999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHh-----
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLI----- 257 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~----- 257 (393)
.+||+|||++..... ......||+.|+|||++.
T Consensus 148 ---------------------------------------~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~ 188 (288)
T d2jfla1 148 ---------------------------------------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 188 (288)
T ss_dssp ---------------------------------------CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTT
T ss_pred ---------------------------------------CEEEEechhhhccCCCcccccccccccccCCHHHHhhcccC
Confidence 499999999876532 234567999999999985
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+.+++.++|||||||++|+|++|+.||.+.+ ....+..+... ..|
T Consensus 189 ~~~y~~k~DiwSlGvilyemltg~~Pf~~~~------~~~~~~~i~~~--~~~--------------------------- 233 (288)
T d2jfla1 189 DRPYDYKADVWSLGITLIEMAEIEPPHHELN------PMRVLLKIAKS--EPP--------------------------- 233 (288)
T ss_dssp TSSTTTHHHHHHHHHHHHHHHHSSCTTTTSC------GGGHHHHHHHS--CCC---------------------------
T ss_pred CCCCChhhhHHHHHHHHHHHhhCCCCCCCCC------HHHHHHHHHcC--CCC---------------------------
Confidence 3457899999999999999999999997655 22333333221 110
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+...+..+.+||++||+.||.+|||++|+++||||+..
T Consensus 234 ----------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 234 ----------TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp ----------CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred ----------CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 011224556789999999999999999999999999999754
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.5e-54 Score=396.44 Aligned_cols=261 Identities=25% Similarity=0.392 Sum_probs=200.5
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.+.++|++.+.||+|+||.||+|++..+++.||||++.... .....+.+|+.+|+.+ .||||+
T Consensus 5 edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l--------------~HpnIv 70 (307)
T d1a06a_ 5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI--------------KHPNIV 70 (307)
T ss_dssp SCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTC--------------CCTTBC
T ss_pred CCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC--------------CCCCCC
Confidence 446778999999999999999999999999999999987543 2345678899999998 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .++.+++||||+ +++|.+++... ..+++.++..++.||+.||+|||++ |++||||||+||++...
T Consensus 71 ~l~~~~~----~~~~~~lvmE~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~ 143 (307)
T d1a06a_ 71 ALDDIYE----SGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSL 143 (307)
T ss_dssp CEEEEEE----CSSEEEEEECCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSS
T ss_pred cEEEEEE----ECCEEEEEEeccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeeccc
Confidence 9999987 677899999999 78999998764 4599999999999999999999998 99999999999999542
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchhHHHhc
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~ 258 (393)
.. .+.+||+|||++..... .....+||+.|+|||++.+
T Consensus 144 ~~----------------------------------------~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~ 183 (307)
T d1a06a_ 144 DE----------------------------------------DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 183 (307)
T ss_dssp ST----------------------------------------TCCEEECCC------------------CTTSCHHHHTT
T ss_pred CC----------------------------------------CceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcC
Confidence 21 12599999999986543 2345679999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.+++.++|||||||++|+|++|++||.+.+ .......+.......+.
T Consensus 184 ~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~~~~~~~~~--------------------------- 230 (307)
T d1a06a_ 184 KPYSKAVDCWSIGVIAYILLCGYPPFYDEN------DAKLFEQILKAEYEFDS--------------------------- 230 (307)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHTTCCCCCT---------------------------
T ss_pred CCCCcHHHhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHhccCCCCCC---------------------------
Confidence 999999999999999999999999997544 23333333221111111
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
+.....++.+.+||.+||..||.+|||++|+++||||++.
T Consensus 231 -----------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 270 (307)
T d1a06a_ 231 -----------PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270 (307)
T ss_dssp -----------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred -----------ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 1123456788999999999999999999999999999864
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-54 Score=403.03 Aligned_cols=290 Identities=23% Similarity=0.336 Sum_probs=210.5
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
..++|+++++||+|+||.||+|++..+++.||+|+++.. ......+.+|+.+|+.+ .||||+++
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l--------------~HpnIv~l 69 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC--------------NSPYIVGF 69 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC--------------CCTTBCCE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC--------------CCCCCCcE
Confidence 467999999999999999999999999999999998753 23345678899999888 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++|. ...++++||||+ +++|.+++.+.. .+++..++.++.|++.||.|||++.||+||||||+|||++.++
T Consensus 70 ~~~~~----~~~~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~- 142 (322)
T d1s9ja_ 70 YGAFY----SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG- 142 (322)
T ss_dssp EEEEE----CSSEEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC-
T ss_pred EEEEE----ECCEEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCC-
Confidence 99998 677899999999 789998887653 4899999999999999999999733899999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-CCCCCCCCCCCchhHHHhcCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||+|..... .....+||+.|+|||++.+.++
T Consensus 143 ------------------------------------------~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y 180 (322)
T d1s9ja_ 143 ------------------------------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180 (322)
T ss_dssp ------------------------------------------CEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCC
T ss_pred ------------------------------------------CEEEeeCCCccccCCCccccccCCccccCchHHcCCCC
Confidence 499999999986543 3445689999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++||||+||++|||++|+.||.+.+.. ...........|......... ....... .............
T Consensus 181 ~~~~DiWSlGvil~ell~G~~Pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~ 250 (322)
T d1s9ja_ 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAK-----ELELMFGCQVEGDAAETPPRP-RTPGRPL----SSYGMDSRPPMAI 250 (322)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCCSSCCCTT-----HHHHHC-----------------------------------CCCCH
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHHhcCCcccCCccc-ccccccc----cccccccccchhH
Confidence 99999999999999999999999865532 111111222222111100000 0000000 0000000001111
Q ss_pred HHHHhh-----hccCC-hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 342 YQVLTE-----KYHWS-KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 342 ~~~~~~-----~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...... ....+ ...+.++.+||.+||+.||.+|||++|+|+||||+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~ 303 (322)
T d1s9ja_ 251 FELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303 (322)
T ss_dssp HHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred HHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence 111110 00111 235678999999999999999999999999999964
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-53 Score=388.45 Aligned_cols=261 Identities=26% Similarity=0.435 Sum_probs=216.5
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.+.++|++.++||+|+||.||+|++..+|+.||||++++... ..+.+.+|+.+|+.+ .|
T Consensus 7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l--------------~H 72 (293)
T d1jksa_ 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI--------------QH 72 (293)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC--------------CC
T ss_pred CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC--------------CC
Confidence 356799999999999999999999999999999999864321 235678999999999 89
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
|||+++++++. +...+++||||+ +|+|.+++.... .+++..++.++.|++.||+|||++ +++||||||+||+
T Consensus 73 pnIv~~~~~~~----~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nil 145 (293)
T d1jksa_ 73 PNVITLHEVYE----NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIM 145 (293)
T ss_dssp TTBCCEEEEEE----CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEE
T ss_pred CCCCcEEEEEE----ECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEE
Confidence 99999999987 678899999999 789999887653 499999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVE 254 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE 254 (393)
++.++.. ...+|++|||++.... .......+|+.|+|||
T Consensus 146 l~~~~~~---------------------------------------~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE 186 (293)
T d1jksa_ 146 LLDRNVP---------------------------------------KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186 (293)
T ss_dssp ESCSSSS---------------------------------------SCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHH
T ss_pred EecCCCc---------------------------------------ccceEecchhhhhhcCCCccccccCCCCcccCHH
Confidence 9766520 1249999999998654 2344567899999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++|||||||++|+|++|+.||.+.+ ....+..+.......+...
T Consensus 187 ~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~--------------------- 239 (293)
T d1jksa_ 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVNYEFEDEY--------------------- 239 (293)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHTTCCCCCHHH---------------------
T ss_pred HHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC------HHHHHHHHHhcCCCCCchh---------------------
Confidence 9999889999999999999999999999998655 3344444433222222211
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
+...+..+.+||++||+.||.+|||++|+++||||++.
T Consensus 240 -----------------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 240 -----------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp -----------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred -----------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 12356788899999999999999999999999999864
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8e-53 Score=397.75 Aligned_cols=333 Identities=50% Similarity=0.908 Sum_probs=273.9
Q ss_pred ccccccCCeeCC-eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 17 YCPVQIGDLFNF-RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 17 ~~~~~~~~~~~~-~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
|+|+.+|+.|.+ ||+++++||+|+||.||+|++..+|+.||||+++.+....+...+|+.+++.+.+.+.+.. ...
T Consensus 1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~---~~~ 77 (362)
T d1q8ya_ 1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE---DSM 77 (362)
T ss_dssp CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHH---HHH
T ss_pred CCCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhh---hhc
Confidence 789999999974 6999999999999999999999999999999998776666778899999999977655432 223
Q ss_pred ccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
.|+|++++++.+..........++.++...++............+++..++.++.|++.||+|||+..||+||||||+||
T Consensus 78 ~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NI 157 (362)
T d1q8ya_ 78 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV 157 (362)
T ss_dssp HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred CcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHe
Confidence 67899999998876554444455555555666666666666667899999999999999999999833999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHH
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEV 255 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~ 255 (393)
|++.++.. .....++++|||.+..........+||+.|+|||+
T Consensus 158 ll~~~~~~-------------------------------------~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~ 200 (362)
T d1q8ya_ 158 LMEIVDSP-------------------------------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEV 200 (362)
T ss_dssp EEEEEETT-------------------------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHH
T ss_pred eeeccCcc-------------------------------------cccceeeEeecccccccccccccccccccccChhh
Confidence 99876531 11224899999999877777777889999999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+....++.++|+||+||++++|++|+.||............+.+...+..+|..|.+..........++...........
T Consensus 201 ~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (362)
T d1q8ya_ 201 LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK 280 (362)
T ss_dssp HHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCC
T ss_pred ccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhcccc
Confidence 99999999999999999999999999999887776667788889999999999999998888877777777777777777
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
...+...........++...+..+.+||.+||++||.+||||+|+|+||||++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 281 LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 334 (362)
T ss_dssp CCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred ccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence 777777788888888889999999999999999999999999999999999865
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.2e-53 Score=399.60 Aligned_cols=259 Identities=24% Similarity=0.397 Sum_probs=215.6
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+-++|++++.||+|+||.||+|++..+|+.||||++.... ...+.+.+|+.+|+.+ .|+||++++
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~~~ 89 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL--------------RHPTLVNLH 89 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHT--------------CCTTBCCEE
T ss_pred CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhC--------------CCCCCCcEE
Confidence 4468999999999999999999999999999999987542 3346678999999999 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+++. +.+.+++||||+ +|+|.+.+.... ..+++.+++.++.||+.||+|||++ |++||||||+|||++.+.
T Consensus 90 ~~~~----~~~~~~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~-- 161 (350)
T d1koaa2 90 DAFE----DDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKR-- 161 (350)
T ss_dssp EEEE----ETTEEEEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTT--
T ss_pred EEEE----ECCEEEEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCC--
Confidence 9987 567899999999 789998885543 4599999999999999999999998 999999999999996443
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC--CCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF--ADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+.+||+|||+++...... ....||+.|+|||++.+.++
T Consensus 162 ---------------------------------------~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~ 202 (350)
T d1koaa2 162 ---------------------------------------SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 202 (350)
T ss_dssp ---------------------------------------SCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCB
T ss_pred ---------------------------------------CCeEEEeecchheecccccccceecCcccccCHHHHcCCCC
Confidence 1249999999998765432 24578999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|+.||.+.+ ..+.+..+.......+...
T Consensus 203 ~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~---------------------------- 248 (350)
T d1koaa2 203 GYYTDMWSVGVLSYILLSGLSPFGGEN------DDETLRNVKSCDWNMDDSA---------------------------- 248 (350)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCSCCGG----------------------------
T ss_pred ChhHhhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCccc----------------------------
Confidence 999999999999999999999997654 4444444443322222111
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....+..+.+||++||+.||.+|||++|+|+||||+..
T Consensus 249 ----------~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~ 286 (350)
T d1koaa2 249 ----------FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 286 (350)
T ss_dssp ----------GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred ----------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 13456788999999999999999999999999999864
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-54 Score=386.64 Aligned_cols=259 Identities=25% Similarity=0.378 Sum_probs=208.8
Q ss_pred CCeeCCeE-EEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 23 GDLFNFRY-HVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 23 ~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
|...+.+| ++.++||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+++|+.+ .||
T Consensus 3 g~~~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l--------------~Hp 68 (270)
T d1t4ha_ 3 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL--------------QHP 68 (270)
T ss_dssp EECTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC--------------CCT
T ss_pred CcCCCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC--------------CCC
Confidence 44445556 77889999999999999999999999999987542 2345678999999998 899
Q ss_pred cceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC--eeeccCCCCce
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCR--IIHTDIKPENI 175 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~--i~H~dlkp~NI 175 (393)
||+++++++.........+++||||+ +++|.+++.+. ..+++.+++.++.||+.||+|||++ + |+||||||+||
T Consensus 69 nIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NI 145 (270)
T d1t4ha_ 69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNI 145 (270)
T ss_dssp TBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGE
T ss_pred CeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhc
Confidence 99999999986666678899999999 78999988765 3489999999999999999999998 8 99999999999
Q ss_pred EEee-chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchh
Q psy12288 176 LMCV-DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aP 253 (393)
|++. ++ .+||+|||+++..... ....+||+.|+||
T Consensus 146 Ll~~~~~-------------------------------------------~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aP 182 (270)
T d1t4ha_ 146 FITGPTG-------------------------------------------SVKIGDLGLATLKRASFAKAVIGTPEFMAP 182 (270)
T ss_dssp EESSTTS-------------------------------------------CEEECCTTGGGGCCTTSBEESCSSCCCCCG
T ss_pred eeeCCCC-------------------------------------------CEEEeecCcceeccCCccCCcccCccccCH
Confidence 9964 33 4999999999755433 3356799999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+ +++.++|||||||++|+|++|+.||.... ....+...+. .+..|..
T Consensus 183 E~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~------~~~~~~~~i~-~~~~~~~--------------------- 233 (270)
T d1t4ha_ 183 EMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRRVT-SGVKPAS--------------------- 233 (270)
T ss_dssp GGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHHHT-TTCCCGG---------------------
T ss_pred HHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcc------cHHHHHHHHH-cCCCCcc---------------------
Confidence 99875 59999999999999999999999996543 2222211111 1111111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLN 387 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 387 (393)
++...++++.+||.+||..||++|||++|+++||||+
T Consensus 234 -----------------~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 234 -----------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp -----------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred -----------------cCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 1233456788999999999999999999999999996
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-53 Score=389.33 Aligned_cols=250 Identities=23% Similarity=0.362 Sum_probs=210.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.+++.+ .||||+++
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~l 73 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--------------DHPFFVKL 73 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC--------------CSTTBCCE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc--------------CCCCeeEE
Confidence 5799999999999999999999999999999998743 23346688999999999 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. +...+++||||+ +|+|.+++... +.+++..++.++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 74 ~~~~~----~~~~~~ivmEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~~~- 145 (288)
T d1uu3a_ 74 YFTFQ----DDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDM- 145 (288)
T ss_dssp EEEEE----CSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTS-
T ss_pred EEEEE----ECCEEEEEEEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCCCc-
Confidence 99987 677899999999 78999888765 3499999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHHHh
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||+++..... ....+||+.|+|||++.
T Consensus 146 ------------------------------------------~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~ 183 (288)
T d1uu3a_ 146 ------------------------------------------HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 183 (288)
T ss_dssp ------------------------------------------CEEECCCTTCEECC----------CCCCGGGCCHHHHH
T ss_pred ------------------------------------------eEEecccccceecccCCcccccccccCCccccCceeec
Confidence 4999999999865322 23457999999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++|||||||++|+|++|+.||.+.+ ....+..+.
T Consensus 184 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~---------------------------------- 223 (288)
T d1uu3a_ 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EYLIFQKII---------------------------------- 223 (288)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH----------------------------------
T ss_pred cCCCCcccceehhhHHHHHHhhCCCCCCCcC------HHHHHHHHH----------------------------------
Confidence 9999999999999999999999999997654 222222221
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHH------HhcCCCCCCC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAAD------CLRHPWLNPR 389 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e------ll~hp~~~~~ 389 (393)
.....++...++.+.+||.+||+.||.+|||++| +++||||+++
T Consensus 224 --------~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 224 --------KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp --------TTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred --------cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 1222344556778899999999999999999988 5889999986
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-52 Score=386.00 Aligned_cols=289 Identities=26% Similarity=0.424 Sum_probs=230.1
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCC-CceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQD-KTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
+++|+++++||+|+||.||+|++..+ ++.||||+++.. ........+|+.+++.+... .||||++
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~-----------~HpnIv~ 74 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF-----------EHPNVVR 74 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT-----------CCTTBCC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhc-----------CCCCcce
Confidence 46899999999999999999999766 678999998643 22345667899998887432 6999999
Q ss_pred ccccceeec-CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYS-RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.|.... ....+.+++||++.+++...........++++.++.++.|++.||+|||++ +|+||||||+|||++.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~~~~ 153 (305)
T d1blxa_ 75 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSG 153 (305)
T ss_dssp EEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTC
T ss_pred eeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEcCCC
Confidence 999986543 345789999999977777666665666799999999999999999999998 999999999999998766
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcC
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+|++|||++.... .......||+.|+|||++.+.
T Consensus 154 -------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~ 190 (305)
T d1blxa_ 154 -------------------------------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 190 (305)
T ss_dssp -------------------------------------------CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTC
T ss_pred -------------------------------------------CeeecchhhhhhhcccccCCCcccChhhcCcchhcCC
Confidence 49999999987543 334567899999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
+++.++||||+||++|+|++|++||.+.+ ..+++..+....|..+...+.................
T Consensus 191 ~y~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 256 (305)
T d1blxa_ 191 SYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ-------- 256 (305)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCC--------
T ss_pred CCChhehhhchHHHHHHHHHCCCCCCCCC------HHHHHHHHHHhhCCCchhcccccccchhhhhcccccc--------
Confidence 99999999999999999999999998766 7788888989888876655433222211111111000
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
....+....++.+.+||++||..||++|||++|+|+||||+++.+
T Consensus 257 -------~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~ 301 (305)
T d1blxa_ 257 -------PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 301 (305)
T ss_dssp -------CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred -------chhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence 111233456678899999999999999999999999999998743
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.6e-53 Score=397.57 Aligned_cols=259 Identities=24% Similarity=0.389 Sum_probs=215.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc-ccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ-VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.++|+++++||+|+||.||+|++..+++.||||++.... .....+.+|+.+|+.+ .||||+++++
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l--------------~HpnIv~~~~ 93 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL--------------HHPKLINLHD 93 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC--------------CSTTBCCEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhC--------------CCCCCCcEEE
Confidence 468999999999999999999999999999999987543 2345677899999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+|. .+..+++||||+ +++|.+.+.... ..+++.+++.++.||+.||+|||++ ||+||||||+|||++.+.
T Consensus 94 ~~~----~~~~~~ivmE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~--- 164 (352)
T d1koba_ 94 AFE----DKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKK--- 164 (352)
T ss_dssp EEE----CSSEEEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTT---
T ss_pred EEE----ECCEEEEEEEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccC---
Confidence 987 678899999999 789888765543 4599999999999999999999998 999999999999997432
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+.+||+|||++...... .....||+.|+|||++.+..++
T Consensus 165 --------------------------------------~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 206 (352)
T d1koba_ 165 --------------------------------------ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVG 206 (352)
T ss_dssp --------------------------------------CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBC
T ss_pred --------------------------------------CCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCC
Confidence 125999999999876543 2335789999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|..||.+.+ ....+..+.......|..
T Consensus 207 ~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~~~~------------------------------ 250 (352)
T d1koba_ 207 FYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWEFDED------------------------------ 250 (352)
T ss_dssp HHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCCCCSS------------------------------
T ss_pred CccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCcc------------------------------
Confidence 99999999999999999999997655 444444444332222211
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.....+.++.+||.+||+.||.+|||++|+|+||||++..
T Consensus 251 --------~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~ 290 (352)
T d1koba_ 251 --------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 290 (352)
T ss_dssp --------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred --------cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence 1134567889999999999999999999999999998754
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-53 Score=397.66 Aligned_cols=298 Identities=27% Similarity=0.421 Sum_probs=236.8
Q ss_pred CCccccccCCe---eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCC
Q psy12288 15 GGYCPVQIGDL---FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVH 88 (393)
Q Consensus 15 ~~~~~~~~~~~---~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~ 88 (393)
+||++.+++.. +.++|+++++||+|+||.||+|.+..+|+.||||+++... ...+.+.+|+.+|+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l------- 74 (346)
T d1cm8a_ 2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM------- 74 (346)
T ss_dssp CSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-------
T ss_pred CCcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-------
Confidence 58999999987 8899999999999999999999999999999999987432 2345678899999999
Q ss_pred cccccCcccccceeccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCee
Q psy12288 89 SSAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRII 166 (393)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~ 166 (393)
.|+|+++++++|...+. ...++++||||++.++....... .+++..++.++.||+.||+|||++ ||+
T Consensus 75 -------~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~-~Ii 143 (346)
T d1cm8a_ 75 -------RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA-GII 143 (346)
T ss_dssp -------CBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEE
T ss_pred -------CCCCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence 89999999998874332 33468999999988888877653 499999999999999999999998 999
Q ss_pred eccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCC
Q psy12288 167 HTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQ 246 (393)
Q Consensus 167 H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~ 246 (393)
||||||+|||++.++ .+|++|||++...........+
T Consensus 144 HrDiKp~NIL~~~~~-------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~ 180 (346)
T d1cm8a_ 144 HRDLKPGNLAVNEDC-------------------------------------------ELKILDFGLARQADSEMTGYVV 180 (346)
T ss_dssp CCCCCGGGEEECTTC-------------------------------------------CEEECCCTTCEECCSSCCSSCS
T ss_pred ccccCcchhhccccc-------------------------------------------ccccccccceeccCCccccccc
Confidence 999999999998776 4999999999988877788899
Q ss_pred CCCCchhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
|+.|+|||++.+. .++.++||||+||++|+|++|++||.+.+ ....+..+....+..|...............
T Consensus 181 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (346)
T d1cm8a_ 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD------HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 254 (346)
T ss_dssp CGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHH
T ss_pred cccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCC------hHHHHHHHHhccCCCcHHHHhhhcchhhhhh
Confidence 9999999999875 46899999999999999999999998766 7788888999999988877654322110000
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
... ...... ..........++.+.+||.+||..||.+|||++|+|+||||+.+.
T Consensus 255 ~~~----~~~~~~-------~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 255 MKG----LPELEK-------KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHH----SCCCCC-------CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hcc----CCcccc-------cchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 000 000000 000011234567889999999999999999999999999998764
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1e-52 Score=388.17 Aligned_cols=250 Identities=25% Similarity=0.425 Sum_probs=214.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++++.||+|+||.||+|++..+|+.||||+++.. ....+.+.+|+.+++.+ .||||+++
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~~ 69 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV--------------THPFIIRM 69 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC--------------CBTTBCCE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc--------------cCcChhhe
Confidence 4799999999999999999999999999999998743 23346678999999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++++. ....+++||||+ ++++...+.... .+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 70 ~~~~~----~~~~~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~~g- 141 (316)
T d1fota_ 70 WGTFQ----DAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNG- 141 (316)
T ss_dssp EEEEE----CSSEEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTS-
T ss_pred eeeEe----eCCeeeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcCCC-
Confidence 99998 678899999999 778777776653 488999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||+++.........+||+.|+|||++.+.+++
T Consensus 142 ------------------------------------------~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~ 179 (316)
T d1fota_ 142 ------------------------------------------HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYN 179 (316)
T ss_dssp ------------------------------------------CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBC
T ss_pred ------------------------------------------CEEEecCccceEeccccccccCcccccCHHHHcCCCCC
Confidence 49999999999887777778899999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|+.||.+.+ .......+..
T Consensus 180 ~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i~~-------------------------------------- 215 (316)
T d1fota_ 180 KSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILN-------------------------------------- 215 (316)
T ss_dssp TTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHH--------------------------------------
T ss_pred chhhccccchhHHHHHhCCCCCCCcC------HHHHHHHHHc--------------------------------------
Confidence 99999999999999999999997654 2233222222
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...+..+.++|.+||..||.+|+ |++++++||||+++
T Consensus 216 ----~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 216 ----AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred ----CCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 22223445667889999999999999996 89999999999985
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-53 Score=387.32 Aligned_cols=283 Identities=27% Similarity=0.446 Sum_probs=225.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|+++++||+|+||.||+|.+..+++.||||+++... ...+.+.+|+.+++.+ .|+||++++
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l--------------~Hp~Iv~~~ 67 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--------------NHPNIVKLL 67 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTC--------------CCTTBCCEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC--------------CCCcEEEec
Confidence 58999999999999999999999999999999986432 2356788999999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .++.+++||||+++++...+.......+++.+++.++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~~~--- 139 (298)
T d1gz8a_ 68 DVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG--- 139 (298)
T ss_dssp EEEE----ETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTS---
T ss_pred cccc----cccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecccC---
Confidence 9998 56789999999988888887766667799999999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||.++.... ......||+.|+|||++....+
T Consensus 140 ----------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~ 179 (298)
T d1gz8a_ 140 ----------------------------------------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179 (298)
T ss_dssp ----------------------------------------CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSS
T ss_pred ----------------------------------------cceeccCCcceeccCCcccceeecccceeeehhhhccccC
Confidence 499999999876543 2344578999999999888764
Q ss_pred -CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 -GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 -~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|||||||++|+|++|+.||.+.+ ..+++..+....+..+...+......... ...........
T Consensus 180 ~~~~~DiwSlGvily~m~~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 247 (298)
T d1gz8a_ 180 YSTAVDIWSLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGTPDEVVWPGVTSMPDY------KPSFPKWARQD 247 (298)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTC------CTTSCCCCCCC
T ss_pred CCccccccccchhhhHHhhCCCCCCCCC------HHHHHHHHHHhcCCCchhhcccccccccc------ccccccccccc
Confidence 889999999999999999999998665 66778888887777554333221111110 00000000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRRS 391 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 391 (393)
... .....+..+.+||++||..||.+|||++|+++||||+++.+
T Consensus 248 ~~~-------~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 248 FSK-------VVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp HHH-------HSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred hhh-------hccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 000 11245578899999999999999999999999999998754
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-53 Score=383.66 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=196.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.+.||+|+||.||+|++..+|+.||+|.+..... ..+.+.+|+.+++.+ .||||++++
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~~~ 69 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL--------------KHPNIVRYY 69 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC--------------CCTTBCCEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC--------------CCCCEeeEE
Confidence 579999999999999999999999999999999875432 235577888888888 899999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCC-----eeeccCCCCceE
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--DYKGIHIQNVRTIIKQVLEGLNYLHTQCR-----IIHTDIKPENIL 176 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~l~~~~~~~i~~ql~~~l~~lH~~~~-----i~H~dlkp~NIl 176 (393)
+.+.. ..+..+++||||+ +|+|.+++... ....+++..++.++.||+.||.|||++ + |+||||||+|||
T Consensus 70 ~~~~~--~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~~~~~~IiHrDiKp~NIl 146 (269)
T d2java1 70 DRIID--RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVF 146 (269)
T ss_dssp EEEEC------CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHH-CC---------CCGGGEE
T ss_pred EEEEe--CCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCCCCEEeCcCchhhcC
Confidence 98852 2455689999999 78999887542 234589999999999999999999987 5 999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchh
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSV 253 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aP 253 (393)
++.++ .+||+|||+++..... .....||+.|+||
T Consensus 147 l~~~~-------------------------------------------~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~AP 183 (269)
T d2java1 147 LDGKQ-------------------------------------------NVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 183 (269)
T ss_dssp ECTTS-------------------------------------------CEEECCHHHHHHC-----------CCCSCCCH
T ss_pred cCCCC-------------------------------------------cEEEeeccceeecccCCCccccCCCCcccCCH
Confidence 98776 4999999999865432 3346789999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+..++.++|||||||++|+|++|+.||.+.+ ..+....+.. +..
T Consensus 184 E~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~------~~~~~~~i~~--~~~------------------------ 231 (269)
T d2java1 184 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKELAGKIRE--GKF------------------------ 231 (269)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH--TCC------------------------
T ss_pred HHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC------HHHHHHHHHc--CCC------------------------
Confidence 99999999999999999999999999999997544 2222222221 111
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 386 (393)
..++...++.+.+||++||..||.+|||++|+++|||+
T Consensus 232 ---------------~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 232 ---------------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp ---------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ---------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 01234456788999999999999999999999999996
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-53 Score=396.44 Aligned_cols=305 Identities=29% Similarity=0.416 Sum_probs=229.6
Q ss_pred CccccccCC-ee--CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCc
Q psy12288 16 GYCPVQIGD-LF--NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHS 89 (393)
Q Consensus 16 ~~~~~~~~~-~~--~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~ 89 (393)
.|+|+.+|+ .| .++|+++++||+|+||.||+|++..+|+.||||++.... .....+.+|+.+++.+
T Consensus 2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-------- 73 (355)
T d2b1pa1 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------- 73 (355)
T ss_dssp CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC--------
T ss_pred CCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc--------
Confidence 588999999 44 489999999999999999999999999999999997543 2234578999999999
Q ss_pred ccccCcccccceeccccceeecC--CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeee
Q psy12288 90 SAYNTQASEKVIRLLNDFKIYSR--NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIH 167 (393)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H 167 (393)
.|+||++++++|...+. ...++|+||||+.++++..+. ..+++..++.++.||+.||+|||++ ||+|
T Consensus 74 ------~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~-giiH 142 (355)
T d2b1pa1 74 ------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIH 142 (355)
T ss_dssp ------CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred ------CCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhc-cccc
Confidence 89999999999875432 457899999999888888764 3489999999999999999999998 9999
Q ss_pred ccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCC
Q psy12288 168 TDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEI 245 (393)
Q Consensus 168 ~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~ 245 (393)
|||||+|||++.++ .++++|||+++.... ......
T Consensus 143 rDlKP~Nil~~~~~-------------------------------------------~~kl~df~~~~~~~~~~~~~~~~ 179 (355)
T d2b1pa1 143 RDLKPSNIVVKSDC-------------------------------------------TLKILDFGLARTAGTSFMMTPYV 179 (355)
T ss_dssp SCCCGGGEEECTTC-------------------------------------------CEEECCCCC--------------
T ss_pred ccCCcccccccccc-------------------------------------------ceeeechhhhhcccccccccccc
Confidence 99999999998776 489999998775543 334557
Q ss_pred CCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 246 QTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
+|+.|+|||++.+..++.++||||+||++|+|++|++||.+.+ .......+....+..+.+.+.........+.
T Consensus 180 ~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 253 (355)
T d2b1pa1 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253 (355)
T ss_dssp -CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHTTSCHHHHHHH
T ss_pred ccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCC------HHHHHHHHHHhccCCCHHHHHHhhhhHHHHh
Confidence 8999999999999999999999999999999999999998766 7788888888888777776655443322222
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
..............................+..+.+||++||..||++||||+|+|+||||+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~ 316 (355)
T d2b1pa1 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316 (355)
T ss_dssp HTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred hcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 111100000000000000000000112346788999999999999999999999999999975
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-52 Score=388.54 Aligned_cols=250 Identities=22% Similarity=0.351 Sum_probs=214.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++++.||+|+||.||+|++..+++.||||++.+. ......+.+|+.+|+.+ .||||+++
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l--------------~hp~Iv~l 70 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--------------RHPFLTAL 70 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC--------------CCTTBCCE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC--------------CCCCEEEE
Confidence 4699999999999999999999999999999998753 22346678899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.|. +...+++||||+ +|+|...+.... .++++.++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 71 ~~~~~----~~~~~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~g- 142 (337)
T d1o6la_ 71 KYAFQ----THDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDG- 142 (337)
T ss_dssp EEEEE----CSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTS-
T ss_pred Eeeec----cccccccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCCC-
Confidence 99998 778899999999 889988887763 489999999999999999999998 999999999999998777
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhcC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIGA 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~ 259 (393)
.+||+|||+++.... .....+||+.|+|||++.+.
T Consensus 143 ------------------------------------------~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~ 180 (337)
T d1o6la_ 143 ------------------------------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180 (337)
T ss_dssp ------------------------------------------CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred ------------------------------------------CEEEeecccccccccCCcccccceeCHHHhhhhhccCC
Confidence 499999999986533 23456799999999999999
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
+++.++|||||||++|+|++|++||.+.+ .......
T Consensus 181 ~y~~~~DiwSlGvilyeml~G~~pf~~~~------~~~~~~~-------------------------------------- 216 (337)
T d1o6la_ 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFEL-------------------------------------- 216 (337)
T ss_dssp CBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHH--------------------------------------
T ss_pred CCChhhcccchhhHHHHHHHCCCCCCCcC------HHHHHHH--------------------------------------
Confidence 99999999999999999999999997655 2222222
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
+......++...++.+.+||++||+.||.+||+ ++|+++||||+++
T Consensus 217 ----i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 217 ----ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp ----HHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred ----HhcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 222233445667788999999999999999994 9999999999875
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.2e-52 Score=391.10 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=215.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|+++++||+|+||.||+|++..+|+.||||++... ....+.+.+|+.+|+.+ .||||+++
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l--------------~hpnIv~~ 106 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--------------NFPFLVKL 106 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC--------------CCTTBCCE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc--------------CCCcEeec
Confidence 5899999999999999999999999999999998743 23345678899999998 89999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++.+. .....++|||++ ++++...+.... .+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 107 ~~~~~----~~~~~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~g- 178 (350)
T d1rdqe_ 107 EFSFK----DNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQG- 178 (350)
T ss_dssp EEEEE----CSSEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTS-
T ss_pred ccccc----cccccccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCCC-
Confidence 99987 677899999999 888888887663 499999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||+++..........||+.|+|||++.+.+++
T Consensus 179 ------------------------------------------~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~ 216 (350)
T d1rdqe_ 179 ------------------------------------------YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYN 216 (350)
T ss_dssp ------------------------------------------CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBC
T ss_pred ------------------------------------------CEEeeeceeeeecccccccccCccccCCHHHHcCCCCC
Confidence 49999999999887777778899999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|+.||.+.+ ....+..+..
T Consensus 217 ~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i~~-------------------------------------- 252 (350)
T d1rdqe_ 217 KAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVS-------------------------------------- 252 (350)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH--------------------------------------
T ss_pred ccccccchhHHHHHHHhCCCCCCCcC------HHHHHHHHhc--------------------------------------
Confidence 99999999999999999999997544 2333333322
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
....++...++.+.+||++||..||.+|+ |++|+++||||++.
T Consensus 253 ----~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 253 ----GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred ----CCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 12223445677889999999999999995 99999999999875
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-52 Score=378.94 Aligned_cols=250 Identities=26% Similarity=0.430 Sum_probs=206.7
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc-------cchhhHHHHHHHHHhcccCCCCcccccCcccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV-------YADTARDEIVLLKAVGRKSNVHSSAYNTQASE 98 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 98 (393)
++++|++.++||+|+||.||+|++..+++.||||++..... ...++.+|+.+++.+.+ .|+
T Consensus 2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~------------~h~ 69 (273)
T d1xwsa_ 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS------------GFS 69 (273)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS------------SSC
T ss_pred CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc------------CCC
Confidence 46789999999999999999999999999999999875321 23456799999999942 489
Q ss_pred cceeccccceeecCCCeEEEEEEeec-c-ccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceE
Q psy12288 99 KVIRLLNDFKIYSRNGTHICMVFEVM-G-YNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENIL 176 (393)
Q Consensus 99 ~i~~~~~~~~~~~~~~~~~~iv~e~~-~-~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl 176 (393)
||+++++.+. ..+..++|||++ + +++.+.+... ..+++++++.++.||+.||+|||++ ||+||||||+|||
T Consensus 70 nIv~~~~~~~----~~~~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIl 142 (273)
T d1xwsa_ 70 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENIL 142 (273)
T ss_dssp SBCCEEEEEE----CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEE
T ss_pred CccEEEEEEe----eCCeEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceE
Confidence 9999999987 677899999998 3 5777777665 3499999999999999999999998 9999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-CCCCCCCCCCCchhHH
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-HFADEIQTRQYRSVEV 255 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~t~~y~aPE~ 255 (393)
++.+.. .+||+|||++..... ......||+.|+|||+
T Consensus 143 l~~~~~------------------------------------------~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~ 180 (273)
T d1xwsa_ 143 IDLNRG------------------------------------------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180 (273)
T ss_dssp EETTTT------------------------------------------EEEECCCTTCEECCSSCBCCCCSCGGGSCHHH
T ss_pred EecCCC------------------------------------------eEEECccccceecccccccccccCCCcCCHHH
Confidence 985532 599999999976543 3445679999999999
Q ss_pred HhcCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGY-GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~-~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+.++ +.++|||||||++|+|++|+.||...+ .+..
T Consensus 181 ~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------------~i~~------------------------------ 218 (273)
T d1xwsa_ 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIR------------------------------ 218 (273)
T ss_dssp HHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHH------------------------------
T ss_pred HcCCCCCCcccccccceeeehhHhhCCCCCCCch------------HHhh------------------------------
Confidence 988765 678999999999999999999996321 0110
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
....++...++++.+||++||..||++|||++|+++||||++..
T Consensus 219 ------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~ 262 (273)
T d1xwsa_ 219 ------------GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 262 (273)
T ss_dssp ------------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred ------------cccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence 11112334567889999999999999999999999999999864
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-53 Score=389.47 Aligned_cols=258 Identities=25% Similarity=0.410 Sum_probs=216.6
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
+-++|++.+.||+|+||.||+|.+..+++.||||+++........+.+|+.+|+.+ .|+||+++++
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l--------------~HpnIv~~~~ 68 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA--------------RHRNILHLHE 68 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS--------------CCTTBCCEEE
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhC--------------CCCCCCeEEE
Confidence 44689999999999999999999999999999999987665566788999999998 8999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+|. +...+++||||+ +++|.+.+.... ..+++++++.++.||+.||+|||++ ||+||||||+|||++.+..
T Consensus 69 ~~~----~~~~~~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~-- 140 (321)
T d1tkia_ 69 SFE----SMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRS-- 140 (321)
T ss_dssp EEE----ETTEEEEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSC--
T ss_pred EEE----ECCEEEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCc--
Confidence 997 567899999999 679999886543 3589999999999999999999998 9999999999999975431
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCCCCCCchhHHHhcCCCC
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
..++++|||++...... .....+|+.|+|||.+.+..++
T Consensus 141 ---------------------------------------~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~ 181 (321)
T d1tkia_ 141 ---------------------------------------STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181 (321)
T ss_dssp ---------------------------------------CCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEEC
T ss_pred ---------------------------------------eEEEEcccchhhccccCCcccccccccccccchhccCCCCC
Confidence 25899999998765432 2344689999999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|+|++|..||.+.+ ..+.+..+....-.+|....
T Consensus 182 ~~~DiWSlGvily~ll~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~---------------------------- 227 (321)
T d1tkia_ 182 TATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYTFDEEAF---------------------------- 227 (321)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCCCHHHH----------------------------
T ss_pred chhhcccHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCChhhc----------------------------
Confidence 99999999999999999999997655 44444544443333333221
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
...+..+.+||++||..||.+|||++|+++||||+.
T Consensus 228 ----------~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~ 263 (321)
T d1tkia_ 228 ----------KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263 (321)
T ss_dssp ----------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred ----------cCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence 234667889999999999999999999999999964
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-52 Score=383.37 Aligned_cols=275 Identities=28% Similarity=0.445 Sum_probs=216.5
Q ss_pred EEEEecccCceEEEEEEeCCCCceEEEEEEecccc------cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 32 VIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV------YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
.+++||+|+||.||+|++..+++.||||+++.... ....+.+|+.+++.+ .|+||+++++
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l--------------~hpnIv~~~~ 67 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL--------------SHPNIIGLLD 67 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC--------------CCTTBCCEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC--------------CCCCEeEEEe
Confidence 46899999999999999999999999999864321 235678999999999 8999999999
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
++. .++++++||||+.+++...+.... ..+++.+++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 68 ~~~----~~~~~~ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~~~~---- 137 (299)
T d1ua2a_ 68 AFG----HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENG---- 137 (299)
T ss_dssp EEC----CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTC----
T ss_pred eec----cCCceeehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEecCCC----
Confidence 987 667799999999766666665433 4589999999999999999999998 999999999999998766
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-CC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-GY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~ 261 (393)
.+||+|||++...... ....+||+.|+|||++... .+
T Consensus 138 ---------------------------------------~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 178 (299)
T d1ua2a_ 138 ---------------------------------------VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY 178 (299)
T ss_dssp ---------------------------------------CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCC
T ss_pred ---------------------------------------ccccccCccccccCCCcccccceecChhhccHHHHccCCCC
Confidence 4999999999766432 3345789999999999765 57
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|.+||.+.+ ..+++..+.+..|..+.+.+............ . .......
T Consensus 179 ~~~~DiwSlGvil~el~~g~~pf~~~~------~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~ 245 (299)
T d1ua2a_ 179 GVGVDMWAVGCILAELLLRVPFLPGDS------DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF----K---SFPGIPL 245 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC----C---CCCCCCH
T ss_pred ChhhhhhhcchHHHHHHhCcCCCCCCC------HHHHHHHHHHhcCCCChhhccchhccchhhhh----c---cCCCCCh
Confidence 999999999999999999999998766 77888899998887766544332221111100 0 0001100
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.. .....+..+.+||.+||+.||++||||+|+|+||||++.
T Consensus 246 ~~-------~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 286 (299)
T d1ua2a_ 246 HH-------IFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 286 (299)
T ss_dssp HH-------HCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred HH-------hcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence 11 112346789999999999999999999999999999875
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-52 Score=383.94 Aligned_cols=253 Identities=22% Similarity=0.313 Sum_probs=204.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
.++|+++++||+|+||.||+|++..+++.||||++..... ..+.+.+|+.+|+.+ .||||++
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l--------------~HpnIv~ 79 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL--------------RHPNTIQ 79 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC--------------CCCCEee
Confidence 3469999999999999999999999999999999875432 224577899999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
+++++. ....+++||||+.++++..+.... ..+++.+++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 80 ~~~~~~----~~~~~~iv~E~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~- 152 (309)
T d1u5ra_ 80 YRGCYL----REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPG- 152 (309)
T ss_dssp EEEEEE----ETTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTT-
T ss_pred EEEEEE----ECCEEEEEEEecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECCCC-
Confidence 999987 567899999999544444433322 4599999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhc---C
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIG---A 259 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~---~ 259 (393)
.+||+|||++..... .....||+.|+|||++.+ .
T Consensus 153 ------------------------------------------~~Kl~DFG~a~~~~~-~~~~~GT~~Y~APE~~~~~~~~ 189 (309)
T d1u5ra_ 153 ------------------------------------------LVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEG 189 (309)
T ss_dssp ------------------------------------------EEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHTTTTSC
T ss_pred ------------------------------------------CEEEeecccccccCC-CCccccCccccCHHHHhccCCC
Confidence 599999999986543 345679999999999975 3
Q ss_pred CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcc
Q psy12288 260 GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPW 339 (393)
Q Consensus 260 ~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (393)
+++.++|||||||++|+|++|..||.+.+ ....+..+.. +..|.
T Consensus 190 ~y~~~~DiwSlGvilyel~~g~~Pf~~~~------~~~~~~~i~~--~~~~~---------------------------- 233 (309)
T d1u5ra_ 190 QYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQ--NESPA---------------------------- 233 (309)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SCCCC----------------------------
T ss_pred CcCchhhhhhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHh--CCCCC----------------------------
Confidence 58899999999999999999999997544 3333333222 11110
Q ss_pred hhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 340 GLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
..+...++.+.+||.+||+.||.+|||++|+|+||||..-
T Consensus 234 ----------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~ 273 (309)
T d1u5ra_ 234 ----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (309)
T ss_dssp ----------CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred ----------CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence 0113456788999999999999999999999999999753
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.4e-51 Score=373.46 Aligned_cols=256 Identities=25% Similarity=0.382 Sum_probs=212.0
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc----------chhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY----------ADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
|.++|++.+.||+|+||.||+|++..+++.||||++...... .+.+.+|+.+++.+.
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------------- 67 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS------------- 67 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 457999999999999999999999999999999998754321 235678999999992
Q ss_pred ccccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCc
Q psy12288 96 ASEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPEN 174 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~N 174 (393)
.|+||+++++++. +++++++||||+ +++|.+++... ..+++.+++.++.||+.||+|||++ ||+||||||+|
T Consensus 68 ~hpnIv~~~~~~~----~~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~N 140 (277)
T d1phka_ 68 GHPNIIQLKDTYE----TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPEN 140 (277)
T ss_dssp TCTTBCCEEEEEE----CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGG
T ss_pred CCCCeEEEEeecc----cCcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccce
Confidence 4999999999998 778899999999 78999998765 3599999999999999999999998 99999999999
Q ss_pred eEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCch
Q psy12288 175 ILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRS 252 (393)
Q Consensus 175 Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~a 252 (393)
|+++.++ .+||+|||+++.... ......||+.|+|
T Consensus 141 ill~~~~-------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~ 177 (277)
T d1phka_ 141 ILLDDDM-------------------------------------------NIKLTDFGFSCQLDPGEKLREVCGTPSYLA 177 (277)
T ss_dssp EEECTTC-------------------------------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCC
T ss_pred EEEcCCC-------------------------------------------CeEEccchheeEccCCCceeeeeccCCCCC
Confidence 9998776 499999999987643 3445678999999
Q ss_pred hHHHhc------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCC
Q psy12288 253 VEVLIG------AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTP 326 (393)
Q Consensus 253 PE~~~~------~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 326 (393)
||.+.+ ..++.++||||+||++|+|++|+.||.+.+ ..+....+....-..+..
T Consensus 178 PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~-------------- 237 (277)
T d1phka_ 178 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRMIMSGNYQFGSP-------------- 237 (277)
T ss_dssp HHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCTT--------------
T ss_pred HHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC------HHHHHHHHHhCCCCCCCc--------------
Confidence 999974 246889999999999999999999997654 333333333211111110
Q ss_pred CCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 327 QGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
.....++++.+||.+||+.||.+|||++|+++||||+.
T Consensus 238 ------------------------~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~ 275 (277)
T d1phka_ 238 ------------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275 (277)
T ss_dssp ------------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred ------------------------ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence 11356678999999999999999999999999999975
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-51 Score=383.68 Aligned_cols=293 Identities=22% Similarity=0.373 Sum_probs=229.8
Q ss_pred CccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCc
Q psy12288 16 GYCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQ 95 (393)
Q Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 95 (393)
+..|.+.++. +|+.+++||+|+||.||+|++..+++.||||++..+. ....+|+.+|+.+
T Consensus 11 ~~~p~~~~~~---~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l-------------- 70 (350)
T d1q5ka_ 11 GQGPDRPQEV---SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL-------------- 70 (350)
T ss_dssp SSSSCCCEEE---EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---SSCCHHHHHHHHC--------------
T ss_pred CCCCCCcccC---CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc---hHHHHHHHHHHhc--------------
Confidence 3345555544 8999999999999999999999999999999987643 3446899999999
Q ss_pred ccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 96 ASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIAR--SDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 96 ~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~--~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
.|+|++++++.|.... .+..++++||||+++++...+.. .....+++.+++.++.||+.||+|||++ ||+|||||
T Consensus 71 ~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiK 149 (350)
T d1q5ka_ 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIK 149 (350)
T ss_dssp CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCC
T ss_pred CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCC
Confidence 8999999999986543 24567899999998776665532 2335699999999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCC
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQ 249 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~ 249 (393)
|+|||++.++. .+||+|||++.... ......+||+.
T Consensus 150 p~NILl~~~~~------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~ 187 (350)
T d1q5ka_ 150 PQNLLLDPDTA------------------------------------------VLKLCDFGSAKQLVRGEPNVSYICSRY 187 (350)
T ss_dssp GGGEEECTTTC------------------------------------------CEEECCCTTCEECCTTSCCCSCCSCTT
T ss_pred cceEEEecCCC------------------------------------------ceeEecccchhhccCCccccccccccc
Confidence 99999986642 48999999987653 33445688999
Q ss_pred CchhHHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCC
Q psy12288 250 YRSVEVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQG 328 (393)
Q Consensus 250 y~aPE~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 328 (393)
|+|||.+.+. .++.++||||+||++|||++|+.||...+ ..+++..+.+..|..+.+.+............
T Consensus 188 y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~-- 259 (350)
T d1q5ka_ 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS------GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF-- 259 (350)
T ss_dssp SCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCC---CCCC--
T ss_pred ccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCC------HHHHHHHHHHHhCCChHHhhhhhccchhhccc--
Confidence 9999998764 68999999999999999999999998766 77889999999999888776654332211110
Q ss_pred CeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 329 NFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.......... ......++.+.+||.+||..||.+||||.|+|+||||++.+
T Consensus 260 -----~~~~~~~~~~------~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 260 -----PQIKAHPWTK------VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp -----CCCCCCCGGG------TSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred -----cccccCchhh------hcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence 0000000000 11234567889999999999999999999999999998754
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-52 Score=389.19 Aligned_cols=262 Identities=22% Similarity=0.364 Sum_probs=210.9
Q ss_pred eCCeEEEEE-EecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 26 FNFRYHVIR-KLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 26 ~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+-++|++.. .||+|+||.||+|++..+++.||||+++. .....+|+.++..+. .|+||++++
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~-------------~hpnIv~l~ 71 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRAS-------------QCPHIVRIV 71 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHT-------------TSTTBCCEE
T ss_pred cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhc-------------CCCCCCeEE
Confidence 345799875 59999999999999999999999999875 356788998876552 799999999
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
++|......+.++++||||| +|+|.+++.......+++.+++.++.||+.||+|||++ ||+||||||+|||++.+..
T Consensus 72 ~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~- 149 (335)
T d2ozaa1 72 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRP- 149 (335)
T ss_dssp EEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSST-
T ss_pred EEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCccccccccccccccccc-
Confidence 99986655678899999999 78999999876555699999999999999999999998 9999999999999976432
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc--CCCCCCCCCCCCchhHHHhcCCC
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID--DHFADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~ 261 (393)
...+||+|||+++... .......||+.|+|||++.+..+
T Consensus 150 ---------------------------------------~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y 190 (335)
T d2ozaa1 150 ---------------------------------------NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 190 (335)
T ss_dssp ---------------------------------------TCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGG
T ss_pred ---------------------------------------cccccccccceeeeccCCCccccccCCcccCCcHHHcCCCC
Confidence 1259999999998653 33455689999999999999889
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|+|++|++||.+.+..... ..+.... .
T Consensus 191 ~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~------~~~~~~i-----------~----------------------- 230 (335)
T d2ozaa1 191 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------PGMKTRI-----------R----------------------- 230 (335)
T ss_dssp SHHHHHHHHHHHHHHHTTSSCSCEETTCC--------------CC-----------C-----------------------
T ss_pred CHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH------HHHHHHH-----------h-----------------------
Confidence 99999999999999999999999765532210 0000000 0
Q ss_pred HHHHhhhccCC----hhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 342 YQVLTEKYHWS----KAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 342 ~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
.....++ ...++.+.+||++||+.||++|||+.|+++||||.+.
T Consensus 231 ----~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 231 ----MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 278 (335)
T ss_dssp ----SCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred ----cCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence 0000011 3456789999999999999999999999999999653
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.5e-51 Score=383.61 Aligned_cols=256 Identities=22% Similarity=0.355 Sum_probs=206.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|++..+|+.||||++.... .....+.+|...++.+.+ ..||||+++
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~-----------~~hpnIv~l 72 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-----------GDCPFIVCM 72 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS-----------SCCTTBCCE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc-----------CCCCcEEEE
Confidence 47999999999999999999999999999999986432 122334556555555532 279999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechh
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYD 182 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~ 182 (393)
++++. ..+.+++||||+ +++|...+... ..+++..++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 73 ~~~~~----~~~~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~g- 144 (364)
T d1omwa3 73 SYAFH----TPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHG- 144 (364)
T ss_dssp EEEEE----CSSEEEEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSSS-
T ss_pred EEEEE----ECCEEEEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCCC-
Confidence 99987 677899999999 78999988765 3488999999999999999999998 999999999999998776
Q ss_pred HHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-CCCCCCCCCCchhHHHhc-CC
Q psy12288 183 KVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-FADEIQTRQYRSVEVLIG-AG 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~-~~ 260 (393)
.+||+|||+++..... .....||+.|+|||++.. ..
T Consensus 145 ------------------------------------------~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~ 182 (364)
T d1omwa3 145 ------------------------------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVA 182 (364)
T ss_dssp ------------------------------------------CEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCC
T ss_pred ------------------------------------------cEEEeeeceeeecCCCcccccccccccchhHHhhcCCC
Confidence 4999999999866543 445679999999999975 46
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|||||||++|+|++|+.||.+.+... . ..+....
T Consensus 183 ~~~~~DiwSlGvilyemltG~~Pf~~~~~~~------~-~~~~~~~---------------------------------- 221 (364)
T d1omwa3 183 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------K-HEIDRMT---------------------------------- 221 (364)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC------H-HHHHHHS----------------------------------
T ss_pred CCcccchhHHHHHHHHHHhCCCCCCCCCHHH------H-HHHHHhc----------------------------------
Confidence 8999999999999999999999997654321 1 1111110
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcC-----HHHHhcCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRAS-----AADCLRHPWLNPR 389 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~ 389 (393)
......++...++.+.+||.+||..||.+||| |+|+++||||+++
T Consensus 222 ----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 222 ----LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp ----SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred ----ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 01111233456778999999999999999999 7999999999986
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-51 Score=377.09 Aligned_cols=250 Identities=22% Similarity=0.339 Sum_probs=208.5
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc----ccchhhHHHHHHHH-HhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ----VYADTARDEIVLLK-AVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~-~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|++.++||+|+||.||+|.+..+++.||||++.++. ...+.+..|..++. .+ .||||++
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~--------------~hp~Iv~ 67 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW--------------EHPFLTH 67 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT--------------TCTTBCC
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhC--------------CCCcEEE
Confidence 57999999999999999999999999999999997532 22344566666554 55 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++++. .+..+++||||+ +|+|..++.... .+++.+++.++.||+.||+|||++ |++||||||+|||++.++
T Consensus 68 ~~~~~~----~~~~~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~~~~ 140 (320)
T d1xjda_ 68 MFCTFQ----TKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDG 140 (320)
T ss_dssp EEEEEE----CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTS
T ss_pred EEEEEc----cCCceeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeecCCC
Confidence 999998 778899999999 789999887653 489999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC---CCCCCCCCCCCchhHHHhc
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD---HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||+++.... ......||+.|+|||++.+
T Consensus 141 -------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (320)
T d1xjda_ 141 -------------------------------------------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG 177 (320)
T ss_dssp -------------------------------------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred -------------------------------------------ceeccccchhhhcccccccccccCCCCCcCCHHHHcC
Confidence 499999999976532 2344578999999999999
Q ss_pred CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCc
Q psy12288 259 AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKP 338 (393)
Q Consensus 259 ~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (393)
.+++.++|||||||++|+|++|+.||.+.+ .......+.
T Consensus 178 ~~~~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~----------------------------------- 216 (320)
T d1xjda_ 178 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIR----------------------------------- 216 (320)
T ss_dssp CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-----------------------------------
T ss_pred CCCCchhhhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHH-----------------------------------
Confidence 999999999999999999999999997654 222222221
Q ss_pred chhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH-HHhcCCCCCCC
Q psy12288 339 WGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA-DCLRHPWLNPR 389 (393)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-ell~hp~~~~~ 389 (393)
.....++...++.+.+||++||+.||.+|||+. |+++||||+++
T Consensus 217 -------~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 217 -------MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp -------HCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred -------cCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 112223455677899999999999999999995 89999999875
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=7.4e-51 Score=371.72 Aligned_cols=278 Identities=26% Similarity=0.449 Sum_probs=219.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|+++++||+|+||.||+|++. +++.||||+++.. ....+.+.+|+.+|+.+ .|+||++++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l--------------~hpnIv~~~ 66 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKEL--------------KHSNIVKLY 66 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC--------------CCTTBCCEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC--------------CCCcEEeee
Confidence 58999999999999999999886 7789999998653 23356788999999998 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....+++|+++++++...+.... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 67 ~~~~----~~~~~~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~~--- 137 (286)
T d1ob3a_ 67 DVIH----TKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREG--- 137 (286)
T ss_dssp EEEE----CSSCEEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTS---
T ss_pred eecc----cCCceeEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCCC---
Confidence 9998 677799999999777777765543 5699999999999999999999998 999999999999998776
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcC-C
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGA-G 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~ 260 (393)
.+|++|||.+...... .....+++.|+|||.+.+. .
T Consensus 138 ----------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~ 177 (286)
T d1ob3a_ 138 ----------------------------------------ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177 (286)
T ss_dssp ----------------------------------------CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCS
T ss_pred ----------------------------------------CEEecccccceecccCccccceecccchhhhHHHHhCCCC
Confidence 4999999998765432 3344689999999999865 4
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++|||||||++|+|++|+.||.+.+ ..+++..+....|..+...+.......+..... ......
T Consensus 178 ~~~~~DiwslGv~l~el~~G~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---- 244 (286)
T d1ob3a_ 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKYDPNF---TVYEPL---- 244 (286)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC---CCCCCC----
T ss_pred CCcceeehhcCcHHHHHHHCCCCCCCCC------HHHHHHHHHHhhCCCChhhccchhhhhhccccc---ccccCc----
Confidence 6999999999999999999999998765 677888888888876654443322221111100 000000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+....+..+.+||++||..||++|||++|+++||||++
T Consensus 245 ------~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 245 ------PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp ------CGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ------chhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 011122345678899999999999999999999999999974
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-49 Score=367.74 Aligned_cols=286 Identities=25% Similarity=0.415 Sum_probs=218.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc---cccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD---QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|+++++||+|+||.||+|++..+|+.||||++... ......+.+|+.+|+.+ .|+|+++++
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l--------------~h~nii~~~ 75 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL--------------KHENVVNLI 75 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHC--------------CCTTBCCEE
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh--------------cCCCccceE
Confidence 5899999999999999999999999999999987543 23345678999999999 788999998
Q ss_pred ccceee----cCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 105 NDFKIY----SRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 105 ~~~~~~----~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
+.+... ....++.++|||++++++....... ...+++..++.++.|++.||.|||++ ||+||||||+|||++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~-~~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~ 153 (318)
T d3blha1 76 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRD 153 (318)
T ss_dssp EEEEC----------CEEEEEECCCEEHHHHHTCT-TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT
T ss_pred eeeecccccccccCceEEEEEeccCCCccchhhhc-ccccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCC
Confidence 887532 1234578999999987777765443 35589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-------CCCCCCCCCCCchh
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-------HFADEIQTRQYRSV 253 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-------~~~~~~~t~~y~aP 253 (393)
+ .+|++|||++..... .....+||+.|+||
T Consensus 154 ~-------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aP 190 (318)
T d3blha1 154 G-------------------------------------------VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190 (318)
T ss_dssp S-------------------------------------------CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCH
T ss_pred C-------------------------------------------cEEeeecceeeecccccccccccccceecCHHHhhH
Confidence 6 499999999875532 22335689999999
Q ss_pred HHHhcC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGA-GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~-~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++.+. .++.++||||+||++|+|++|+.||.+.+ ....+..+....+..+.+............ ....
T Consensus 191 E~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~ 260 (318)
T d3blha1 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT------EQHQLALISQLCGSITPEVWPNVDNYELYE----KLEL 260 (318)
T ss_dssp HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTCCCC-----------C
T ss_pred HHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC------HHHHHHHHHHhcCCCChhhccccchhhhhh----hhcc
Confidence 999875 58999999999999999999999997655 778888888888887765543322111110 0000
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNP 388 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 388 (393)
....+......+.. ...+..+++||.+||..||++||||+|+|+||||+.
T Consensus 261 -~~~~~~~~~~~~~~-----~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~ 310 (318)
T d3blha1 261 -VKGQKRKVKDRLKA-----YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 310 (318)
T ss_dssp -CSSCCBCHHHHHHH-----HHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred -cccccccchhhhcc-----ccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence 00111111112211 123567889999999999999999999999999985
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=5.3e-50 Score=373.14 Aligned_cols=295 Identities=21% Similarity=0.354 Sum_probs=218.6
Q ss_pred ccccccCCeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcc
Q psy12288 17 YCPVQIGDLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQA 96 (393)
Q Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 96 (393)
.+++..++ .++|+++++||+|+||.||+|++..+++.||||+++.. ..+.+.+|+.+|+.+. .
T Consensus 26 ~~~~~~~~--~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~-------------~ 88 (328)
T d3bqca1 26 SHVVEWGN--QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR-------------G 88 (328)
T ss_dssp GCCCCCCC--GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHT-------------T
T ss_pred hcccCCCC--CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhcc-------------C
Confidence 34454443 47899999999999999999999999999999998753 3567889999999983 5
Q ss_pred cccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCce
Q psy12288 97 SEKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENI 175 (393)
Q Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NI 175 (393)
|+||+++++.|.. .....+++||||+ +++|.... ..+++.+++.++.||+.||+|||++ ||+||||||+||
T Consensus 89 hpnIv~~~~~~~~--~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NI 160 (328)
T d3bqca1 89 GPNIITLADIVKD--PVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNV 160 (328)
T ss_dssp STTBCCEEEEEEC--TTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGE
T ss_pred CCCCcEEEEEEEe--cCCCceeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccce
Confidence 8999999998863 2445689999999 55654432 3499999999999999999999998 999999999999
Q ss_pred EEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC--CCCCCCCCCCCchh
Q psy12288 176 LMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD--HFADEIQTRQYRSV 253 (393)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~--~~~~~~~t~~y~aP 253 (393)
|++.++. .++|+|||++..... ......+|+.|+||
T Consensus 161 Li~~~~~------------------------------------------~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aP 198 (328)
T d3bqca1 161 MIDHEHR------------------------------------------KLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 198 (328)
T ss_dssp EEETTTT------------------------------------------EEEECCGGGCEECCTTCCCCSCCSCGGGCCH
T ss_pred EEcCCCC------------------------------------------eeeecccccceeccCCCcccccccCccccCc
Confidence 9986542 489999999976543 34556789999999
Q ss_pred HHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHH-hcCc-ccccccCCCCCe
Q psy12288 254 EVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVL-SQGK-KTLRYFTPQGNF 330 (393)
Q Consensus 254 E~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~-~~~~-~~~~~~~~~~~~ 330 (393)
|.+.+.. ++.++||||+||++|+|++|..||..... ...+...+....|....... .... .....+..
T Consensus 199 E~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~-----~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~---- 269 (328)
T d3bqca1 199 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD-----NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND---- 269 (328)
T ss_dssp HHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS-----HHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGG----
T ss_pred ccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCch-----hHHHHHHHHHHHCCchhhhhhhhcccccCcccch----
Confidence 9998764 79999999999999999999999975442 44556666666664222111 1110 00000000
Q ss_pred eeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 331 RRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
............. .........++++.+||++||+.||++|||++|+|+||||+++.
T Consensus 270 --~~~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~ 326 (328)
T d3bqca1 270 --ILGRHSRKRWERF-VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326 (328)
T ss_dssp --TCCCCCCCCGGGG-CCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred --hcccccccchhhc-ccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 0000000000000 00011234567899999999999999999999999999999874
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-49 Score=363.19 Aligned_cols=247 Identities=19% Similarity=0.249 Sum_probs=206.6
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|+||.||+|.+..+++.||||+++.+....+.+.+|+.+|+.+ .||||+++++.+
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l--------------~HpnIv~~~~~~ 82 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------------KHPNLVQLLGVC 82 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHC--------------CCTTBCCEEEEE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhC--------------CCCCEecCCccE
Confidence 589999999999999999999999999999999987777778899999999999 899999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .++..++||||+ +|++...+.......+++..+..++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 83 ~----~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~~----- 152 (287)
T d1opja_ 83 T----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENH----- 152 (287)
T ss_dssp C----SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGG-----
T ss_pred e----eCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCCC-----
Confidence 7 566789999999 78999998776666789999999999999999999998 999999999999998776
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCC----CCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHF----ADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||+++...... ....||+.|+|||++.+..++
T Consensus 153 --------------------------------------~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~ 194 (287)
T d1opja_ 153 --------------------------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194 (287)
T ss_dssp --------------------------------------CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCS
T ss_pred --------------------------------------cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCC
Confidence 49999999998664332 223468899999999999999
Q ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhH
Q psy12288 263 PAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLY 342 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (393)
.++|||||||++|||++|..||.... ....+..+... +.
T Consensus 195 ~k~DiwS~Gv~l~ell~~~~p~~~~~------~~~~~~~~i~~-~~---------------------------------- 233 (287)
T d1opja_ 195 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK-DY---------------------------------- 233 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHT-TC----------------------------------
T ss_pred chhhhhhHHHHHHHHHhCCCCCCCcc------hHHHHHHHHhc-CC----------------------------------
Confidence 99999999999999999776664332 12222222110 10
Q ss_pred HHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 343 QVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+||.+||..||.+|||++|+++
T Consensus 234 -----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 234 -----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 11233456678999999999999999999999976
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.5e-49 Score=359.77 Aligned_cols=257 Identities=26% Similarity=0.367 Sum_probs=202.0
Q ss_pred eeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccc----cchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 25 LFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQV----YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
.++++|++.+.||+|+||.||+|++..+++.||||+++.+.. ....+.+|+.+++.+ .|+|+
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~--------------~hpni 69 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL--------------NHPAI 69 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC--------------CCTTB
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc--------------CCCCC
Confidence 467799999999999999999999999999999999975432 234578899999998 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+......+..+++||||+ +++|...+... ..+++.+++.++.||+.||+|||++ |++||||||+|||++.
T Consensus 70 v~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~ 146 (277)
T d1o6ya_ 70 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISA 146 (277)
T ss_dssp CCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEET
T ss_pred CcccceeeeccCCCceEEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCc
Confidence 999999987776777899999999 78888887665 3489999999999999999999998 9999999999999987
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------CCCCCCCCCCCchh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSV 253 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~t~~y~aP 253 (393)
++ ..+++|||.+..... .....+||+.|+||
T Consensus 147 ~~-------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aP 183 (277)
T d1o6ya_ 147 TN-------------------------------------------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 183 (277)
T ss_dssp TS-------------------------------------------CEEECCCTTCEECC----------------TTCCH
T ss_pred cc-------------------------------------------cceeehhhhhhhhccccccccccccccCcccccCH
Confidence 76 489999998765422 23345789999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+..++.++|||||||++|+|++|++||.+.+ ..+.+..+... ++.+..
T Consensus 184 E~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~~~~~-~~~~~~--------------------- 235 (277)
T d1o6ya_ 184 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVRE-DPIPPS--------------------- 235 (277)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHC-CCCCGG---------------------
T ss_pred HHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC------HHHHHHHHHhc-CCCCCc---------------------
Confidence 99999999999999999999999999999997654 22332222221 111110
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-CHHHHhcCCCC
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-SAADCLRHPWL 386 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-t~~ell~hp~~ 386 (393)
......+..+.+||.+||..||.+|| |++++ .|+|.
T Consensus 236 ----------------~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~ 272 (277)
T d1o6ya_ 236 ----------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLV 272 (277)
T ss_dssp ----------------GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred ----------------hhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence 01234567889999999999999999 55554 45554
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-49 Score=373.73 Aligned_cols=300 Identities=28% Similarity=0.408 Sum_probs=226.7
Q ss_pred CCCCccccccCCee--CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCC
Q psy12288 13 RPGGYCPVQIGDLF--NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNV 87 (393)
Q Consensus 13 ~~~~~~~~~~~~~~--~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~ 87 (393)
||+-|.+.--++++ .++|+++++||+|+||.||+|++..+|+.||||++.... ...+.+.+|+.+|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l------ 74 (348)
T d2gfsa1 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM------ 74 (348)
T ss_dssp CCCEEEEECSSSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC------
T ss_pred CCCcEEEecCCccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc------
Confidence 34444443335455 479999999999999999999999999999999987543 2235678899999999
Q ss_pred CcccccCcccccceeccccceeec--CCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 88 HSSAYNTQASEKVIRLLNDFKIYS--RNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
.|+|++++++++.... .+....++++++.+++|.+++.. ..+++.+++.++.||+.||+|||++ ||
T Consensus 75 --------~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~-gi 142 (348)
T d2gfsa1 75 --------KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA-DI 142 (348)
T ss_dssp --------CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred --------CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 8899999998886432 23344556555559999988754 3499999999999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCC
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEI 245 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~ 245 (393)
+||||||+|||++.++ .++++|||.+...........
T Consensus 143 iHrDiKp~NILi~~~~-------------------------------------------~~kl~dfg~a~~~~~~~~~~~ 179 (348)
T d2gfsa1 143 IHRDLKPSNLAVNEDC-------------------------------------------ELKILDFGLARHTDDEMTGYV 179 (348)
T ss_dssp CCCCCCGGGEEECTTC-------------------------------------------CEEECCC----CCTGGGSSSC
T ss_pred cccccCCccccccccc-------------------------------------------cccccccchhcccCccccccc
Confidence 9999999999998776 499999999988777777788
Q ss_pred CCCCCchhHHHhcCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCccccccc
Q psy12288 246 QTRQYRSVEVLIGAG-YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYF 324 (393)
Q Consensus 246 ~t~~y~aPE~~~~~~-~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~ 324 (393)
||+.|+|||.+.+.. ++.++|||||||++|+|++|++||.+.+ .......+....+..+.+............
T Consensus 180 g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------HIDQLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp HHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred ccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence 999999999988765 5899999999999999999999998766 777788888888887776554322110000
Q ss_pred CCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 325 TPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.... ........... .....+..+.+||++||+.||.+|||++|+|+||||++..
T Consensus 254 ~~~~----~~~~~~~~~~~-------~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~ 308 (348)
T d2gfsa1 254 YIQS----LTQMPKMNFAN-------VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308 (348)
T ss_dssp HHTT----SCCCCCCCHHH-------HSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hhhh----cccCCCcchhh-------hcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence 0000 00000000000 0124567889999999999999999999999999998754
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-49 Score=369.16 Aligned_cols=284 Identities=26% Similarity=0.418 Sum_probs=214.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
+++|+++++||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+|+.+ .|+|+++++
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l--------------~hp~iv~~~ 72 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF--------------RHENIIGIN 72 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC--------------CCTTBCCCC
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHc--------------CCCCCCcEE
Confidence 479999999999999999999999999999999987432 2345678999999999 889999999
Q ss_pred ccceeecC-CCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSR-NGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+.+..... ...+.+++++.++++|.+++... .+++..++.++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~~~~-- 146 (345)
T d1pmea_ 73 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTC-- 146 (345)
T ss_dssp EEECCSSTTTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTC--
T ss_pred EEEeeccccccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEECCCC--
Confidence 88764322 23456777777799999998764 499999999999999999999998 999999999999998766
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC------CCCCCCCCCCCchhHHHh
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD------HFADEIQTRQYRSVEVLI 257 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||++..... .....+||+.|+|||++.
T Consensus 147 -----------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~ 185 (345)
T d1pmea_ 147 -----------------------------------------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 185 (345)
T ss_dssp -----------------------------------------CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTT
T ss_pred -----------------------------------------CEEEcccCceeeccCCCccceeeccccccceechHHHhh
Confidence 499999999875432 134557899999999985
Q ss_pred c-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccc-cccCCCCCeeeccC
Q psy12288 258 G-AGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTL-RYFTPQGNFRRIDN 335 (393)
Q Consensus 258 ~-~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 335 (393)
. ..++.++||||+||++|+|++|+.||.+.+ ..+.........+..+........... ..+. .....
T Consensus 186 ~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 254 (345)
T d1pmea_ 186 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH------YLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPH 254 (345)
T ss_dssp TBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHH-----HTSCC
T ss_pred cCCCCCchhhhhccCceehHHhhCCCCCCCCC------HHHHHHHHhhhccCCChhhhhhhhhhhhhccc-----ccCCc
Confidence 4 457899999999999999999999997665 566677777777766554432211100 0000 00000
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPR 389 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 389 (393)
....... ......+..+.+||.+||+.||.+|||++|+|+||||+..
T Consensus 255 ~~~~~~~-------~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 255 KNKVPWN-------RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp CCCCCHH-------HHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred cCCCCHH-------HhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 0000000 0112345678999999999999999999999999999854
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-48 Score=355.34 Aligned_cols=282 Identities=27% Similarity=0.422 Sum_probs=217.3
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|+++++||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.+ .|+|+++++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l--------------~h~niv~~~ 67 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL--------------KHKNIVRLH 67 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC--------------CCTTBCCEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc--------------CcCCEEeec
Confidence 58999999999999999999999999999999987543 2346678999999988 899999999
Q ss_pred ccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 105 NDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
+.+. .....+++++++.+..+..+... ...+++..++.++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 68 ~~~~----~~~~~~iv~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~~~--- 138 (292)
T d1unla_ 68 DVLH----SDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNG--- 138 (292)
T ss_dssp EEEE----CSSEEEEEEECCSEEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC---
T ss_pred cccc----cccceeEEeeecccccccccccc-ccccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCcccccccCC---
Confidence 9887 67789999999955444444333 24589999999999999999999998 999999999999998666
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC---CCCCCCCCCCchhHHHhcCC-
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH---FADEIQTRQYRSVEVLIGAG- 260 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~- 260 (393)
.+|++|||.+...... .....+++.|+|||++.+..
T Consensus 139 ----------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 178 (292)
T d1unla_ 139 ----------------------------------------ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178 (292)
T ss_dssp ----------------------------------------CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSC
T ss_pred ----------------------------------------ceeeeecchhhcccCCCccceeeccccchhhhhHhccCCC
Confidence 4999999999866432 23446788999999998765
Q ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 261 YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 261 ~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
++.++||||+||++|+|++|..||.... ...+++..+....+..+...+....+..........
T Consensus 179 ~~~~~DiwSlG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 242 (292)
T d1unla_ 179 YSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY----------- 242 (292)
T ss_dssp CCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC-----------
T ss_pred CCchhhccccchHHHHHhhCCCCCCCCC-----CHHHHHHHHHhhcCCCChhhhhhhhhcccccccccc-----------
Confidence 6899999999999999999999875332 155667777777777655433222222111110000
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcCCCCCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRHPWLNPRR 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 390 (393)
.............++.+.+||++||+.||.+||||+|+|+||||++..
T Consensus 243 --~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~ 290 (292)
T d1unla_ 243 --PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp --CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred --cccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence 000011112245567889999999999999999999999999998753
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-48 Score=352.06 Aligned_cols=245 Identities=19% Similarity=0.325 Sum_probs=193.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|+||.||+|.+. +++.||||+++.+....+.+.+|+.+++.+ .||||+++++++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l--------------~HpnIv~~~g~~ 69 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------------SHPKLVQLYGVC 69 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHC--------------CCTTBCCEEEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhc--------------CCCCccccccee
Confidence 57999999999999999999876 567899999987776778899999999999 899999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. .+...++||||+ +|+|.+++.... ..++++.+..++.|++.||+|||++ +|+||||||+|||++.++
T Consensus 70 ~----~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~~----- 138 (263)
T d1sm2a_ 70 L----EQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQ----- 138 (263)
T ss_dssp C----SSSSCEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGGG-----
T ss_pred c----cCCceEEEEEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCCC-----
Confidence 7 556789999999 788888876543 4588999999999999999999998 999999999999998877
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||+++..... .....||+.|+|||++.+..++
T Consensus 139 --------------------------------------~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~ 180 (263)
T d1sm2a_ 139 --------------------------------------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180 (263)
T ss_dssp --------------------------------------CEEECSCC------------------CTTSCCHHHHTTCCCC
T ss_pred --------------------------------------CeEecccchheeccCCCceeecceecCcccCChHHhcCCCCC
Confidence 4999999998765432 2234679999999999999999
Q ss_pred chhhHHhHHHHHHHHHhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELATG-DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|||||||++|||+++ .+||...+ ....+..+.. +.
T Consensus 181 ~k~DVwS~Gvil~el~t~~~~~~~~~~------~~~~~~~i~~--~~--------------------------------- 219 (263)
T d1sm2a_ 181 SKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDIST--GF--------------------------------- 219 (263)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTCSCC------HHHHHHHHHH--TC---------------------------------
T ss_pred chhhhcchHHHHHHHHHCCCCCCCCCC------HHHHHHHHHh--cC---------------------------------
Confidence 999999999999999994 55554332 2222222211 11
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+..++..+.+||.+||..||++|||++|+++|
T Consensus 220 ------~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 220 ------RLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ------CCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 011224456788999999999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-49 Score=357.73 Aligned_cols=250 Identities=19% Similarity=0.317 Sum_probs=202.0
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.++||+|+||.||+|.+. +++.||||+++......+.+.+|+.+++.+ .|+||+++++.
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l--------------~HpnIv~~~g~ 76 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------------QHQRLVRLYAV 76 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhC--------------CCCCEeEEEee
Confidence 368999999999999999999875 677899999987766678899999999999 89999999986
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. ....++||||+ +|+|.+.+.......+++..+..++.||+.||.|||++ +|+||||||+|||++.++
T Consensus 77 ~~-----~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~~~---- 146 (272)
T d1qpca_ 77 VT-----QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTL---- 146 (272)
T ss_dssp EC-----SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTS----
T ss_pred ec-----cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeeccc----
Confidence 64 23468999999 78888876554434589999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||+++..... .....+|+.|+|||++.+..+
T Consensus 147 ---------------------------------------~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~ 187 (272)
T d1qpca_ 147 ---------------------------------------SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187 (272)
T ss_dssp ---------------------------------------CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEE
T ss_pred ---------------------------------------ceeeccccceEEccCCccccccccCCcccccChHHHhCCCC
Confidence 4999999999866432 234568899999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCC-CCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELATGDYL-FDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~p-f~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|||||||++|||++|..| |...+ ....+..+.. +.
T Consensus 188 ~~~sDvwS~Gvvl~ellt~~~~~~~~~~------~~~~~~~i~~--~~-------------------------------- 227 (272)
T d1qpca_ 188 TIKSDVWSFGILLTEIVTHGRIPYPGMT------NPEVIQNLER--GY-------------------------------- 227 (272)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TC--------------------------------
T ss_pred CchhhhhhhHHHHHHHHhCCCCCCCCCC------HHHHHHHHHh--cC--------------------------------
Confidence 9999999999999999996544 43322 2222222111 10
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc--CCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR--HPWLN 387 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~ 387 (393)
....+...+..+.+||.+||+.||.+|||++|+++ |+||.
T Consensus 228 -------~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 228 -------RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------CCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 01123455678899999999999999999999998 77775
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-48 Score=350.17 Aligned_cols=245 Identities=20% Similarity=0.316 Sum_probs=203.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|+||.||+|+++ ++..||||+++.+....+.+.+|+.+++.+ .|+||+++++.+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l--------------~HpnIv~~~g~~ 68 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------------SHEKLVQLYGVC 68 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTC--------------CCTTBCCEEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhc--------------CCCceeeEEEEE
Confidence 46889999999999999999985 778899999998777778899999999999 899999999988
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
. ....+++||||+ +|++..++.... ..+++..+.+++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 69 ~----~~~~~~iv~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~~~----- 137 (258)
T d1k2pa_ 69 T----KQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQG----- 137 (258)
T ss_dssp C----CSSSEEEEEECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECTTC-----
T ss_pred e----eCCceEEEEEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcCCC-----
Confidence 7 566799999999 688888765543 4488999999999999999999998 999999999999998766
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCCC
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGYG 262 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~ 262 (393)
.+||+|||+++..... .....+|+.|+|||.+.+..++
T Consensus 138 --------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 179 (258)
T d1k2pa_ 138 --------------------------------------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179 (258)
T ss_dssp --------------------------------------CEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCC
T ss_pred --------------------------------------cEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCC
Confidence 4999999999765432 2235678999999999999999
Q ss_pred chhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 263 PAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 263 ~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
.++|||||||++|||++ |+.||.+.+ ..+....+.. +.
T Consensus 180 ~ksDiwS~G~~l~el~t~g~~Pf~~~~------~~~~~~~i~~--~~--------------------------------- 218 (258)
T d1k2pa_ 180 SKSDIWAFGVLMWEIYSLGKMPYERFT------NSETAEHIAQ--GL--------------------------------- 218 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTSC------HHHHHHHHHT--TC---------------------------------
T ss_pred cceeecccchhhHhHHhcCCCCCCCCC------HHHHHHHHHh--CC---------------------------------
Confidence 99999999999999998 899997655 2222222211 10
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+...+...+..+.+||.+||+.||++|||++++++|
T Consensus 219 ------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 219 ------RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred ------CCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 011234455788999999999999999999999987
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-48 Score=357.91 Aligned_cols=249 Identities=19% Similarity=0.260 Sum_probs=199.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc-----eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT-----FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.++||+|+||.||+|++..+++ .||+|.+... ......+.+|+.++..+. .|+||
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~HpnI 103 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-------------SHENI 103 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC-------------CCTTB
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhc-------------CCCcE
Confidence 589999999999999999999876543 6999988643 334566789999999883 68999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC---------------------CCCCCHHHHHHHHHHHHHHHHH
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD---------------------YKGIHIQNVRTIIKQVLEGLNY 158 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------------------~~~l~~~~~~~i~~ql~~~l~~ 158 (393)
+++++.+. ....+++||||+ +|+|.+++.... ...+++..++.++.|++.||+|
T Consensus 104 v~l~~~~~----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y 179 (325)
T d1rjba_ 104 VNLLGACT----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 179 (325)
T ss_dssp CCEEEEEC----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEe----eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 99999987 566799999999 889999986542 1247889999999999999999
Q ss_pred hhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccccc
Q psy12288 159 LHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWID 238 (393)
Q Consensus 159 lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~ 238 (393)
||++ +|+||||||+||+++.++ .+||+|||+|+...
T Consensus 180 LH~~-~IiHRDlKp~Nill~~~~-------------------------------------------~~Kl~DFGla~~~~ 215 (325)
T d1rjba_ 180 LEFK-SCVHRDLAARNVLVTHGK-------------------------------------------VVKICDFGLARDIM 215 (325)
T ss_dssp HHHT-TEEETTCSGGGEEEETTT-------------------------------------------EEEECCCGGGSCGG
T ss_pred HHhC-CeeeccCchhccccccCC-------------------------------------------eEEEeecccccccc
Confidence 9998 999999999999998776 59999999997654
Q ss_pred CCC-----CCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChH
Q psy12288 239 DHF-----ADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKE 312 (393)
Q Consensus 239 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 312 (393)
... ....||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+. ...+..+... +.
T Consensus 216 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~------~~~~~~~~~~-~~---- 284 (325)
T d1rjba_ 216 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV------DANFYKLIQN-GF---- 284 (325)
T ss_dssp GCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC------SHHHHHHHHT-TC----
T ss_pred CCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH------HHHHHHHHhc-CC----
Confidence 322 23457899999999999999999999999999999997 8999976552 2222222221 00
Q ss_pred HHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 313 VLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.+||.+||+.||++|||++||++|
T Consensus 285 -----------------------------------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 285 -----------------------------------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp -----------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----------------------------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 111234556789999999999999999999999986
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-48 Score=349.65 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=203.3
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceecccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLND 106 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 106 (393)
.++|++.+.||+|+||.||+|.+..+ +.||||+++......+.+.+|+.+++.+ .|+||+++++.
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l--------------~h~nIv~~~g~ 80 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKL--------------RHEKLVQLYAV 80 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHC--------------CCTTBCCEEEE
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhc--------------ccCCEeEEEEE
Confidence 36899999999999999999988765 5699999987776678899999999999 89999999997
Q ss_pred ceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 107 FKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 107 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
+. . ...++||||+ +|++...+.......+++.++..++.||+.||+|||++ |++||||||+|||++.++
T Consensus 81 ~~----~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~~---- 150 (285)
T d1fmka3 81 VS----E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENL---- 150 (285)
T ss_dssp EC----S-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGG----
T ss_pred Ee----c-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCCC----
Confidence 64 2 3468999999 77888887665445689999999999999999999998 999999999999998776
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHhcCCC
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+||+|||+++..... .....+|+.|+|||++....+
T Consensus 151 ---------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 191 (285)
T d1fmka3 151 ---------------------------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 191 (285)
T ss_dssp ---------------------------------------CEEECCCCTTC--------------CCGGGSCHHHHHHCCC
T ss_pred ---------------------------------------cEEEcccchhhhccCCCceeeccccccccccChHHHhCCCC
Confidence 4999999999765322 233568999999999999999
Q ss_pred CchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchh
Q psy12288 262 GPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGL 341 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
+.++|||||||++|||++|..||..... ....+..+.. +.
T Consensus 192 ~~ksDI~S~Giil~el~t~~~p~~~~~~-----~~~~~~~i~~--~~--------------------------------- 231 (285)
T d1fmka3 192 TIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVER--GY--------------------------------- 231 (285)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHT--TC---------------------------------
T ss_pred CcHHhhhcchHHHHHHHhCCCCCCCCCC-----HHHHHHHHHh--cC---------------------------------
Confidence 9999999999999999996555543221 2222222211 10
Q ss_pred HHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc--CCCCCCCCCC
Q psy12288 342 YQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR--HPWLNPRRSH 392 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~~~~~~ 392 (393)
..+.+...+..+.+||.+||+.||++|||++++++ ++||......
T Consensus 232 ------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~ 278 (285)
T d1fmka3 232 ------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278 (285)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred ------CCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCC
Confidence 11233456678999999999999999999999998 8999876543
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-47 Score=349.07 Aligned_cols=248 Identities=17% Similarity=0.281 Sum_probs=198.7
Q ss_pred CeEEEEEE-ecccCceEEEEEEeCCC--CceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRK-LGWGHFSTVWLSWDLQD--KTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~-lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|.+.+. ||+|+||.||+|.+..+ +..||||+++... ...+.+.+|+.+|+.+ .||||++
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~ 73 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL--------------DNPYIVR 73 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC--------------CCTTBCC
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC--------------CCCCEee
Confidence 57888884 99999999999987654 4579999987532 3346788999999999 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++++. . ..+++||||+ +|+|.+++.... ..+++.++..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 74 l~g~~~----~-~~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~~ 146 (285)
T d1u59a_ 74 LIGVCQ----A-EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRH 146 (285)
T ss_dssp EEEEEE----S-SSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETT
T ss_pred Eeeeec----c-CeEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccCC
Confidence 999875 2 2478999999 678888775433 4589999999999999999999998 999999999999998877
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHH
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEV 255 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~ 255 (393)
.+||+|||+++..... .....||+.|+|||+
T Consensus 147 -------------------------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~ 183 (285)
T d1u59a_ 147 -------------------------------------------YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 183 (285)
T ss_dssp -------------------------------------------EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHH
T ss_pred -------------------------------------------ceeeccchhhhcccccccccccccccccCccccChHH
Confidence 5999999999865432 223467899999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|||||||++|||++ |+.||.+.+ ..+....+.. |.
T Consensus 184 ~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~------~~~~~~~i~~--~~-------------------------- 229 (285)
T d1u59a_ 184 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------GPEVMAFIEQ--GK-------------------------- 229 (285)
T ss_dssp HHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------THHHHHHHHT--TC--------------------------
T ss_pred HhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC--------------------------
Confidence 999999999999999999999998 999997654 2222222211 11
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHH---hcCCCC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADC---LRHPWL 386 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el---l~hp~~ 386 (393)
..+.+...+..+.+||.+||..||++|||+.++ |+|+|+
T Consensus 230 -------------~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 230 -------------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp -------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------------CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 112345567789999999999999999999887 566765
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-48 Score=350.99 Aligned_cols=247 Identities=20% Similarity=0.299 Sum_probs=193.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEeccc---ccchhhHHHHHHHHHhcccCCCCcccccCcccccceecc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQ---VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLL 104 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~ 104 (393)
++|++.++||+|+||.||+|+.. ..||||+++... ...+.+.+|+.+++.+ .|+||++++
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l--------------~HpnIv~~~ 70 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT--------------RHVNILLFM 70 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTC--------------CCTTBCCEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhC--------------CCCCEeeee
Confidence 57899999999999999999754 359999987432 2345678899999998 899999998
Q ss_pred ccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 105 NDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 105 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
+... ...+++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++
T Consensus 71 ~~~~-----~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~~-- 141 (276)
T d1uwha_ 71 GYST-----APQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-- 141 (276)
T ss_dssp EEEC-----SSSCEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTS--
T ss_pred EEEe-----ccEEEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCCC--
Confidence 7653 34578999999 789999886543 4589999999999999999999998 999999999999998776
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-----CCCCCCCCCCCchhHHHhc
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-----HFADEIQTRQYRSVEVLIG 258 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~ 258 (393)
.+||+|||+++.... ......||+.|+|||++.+
T Consensus 142 -----------------------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~ 180 (276)
T d1uwha_ 142 -----------------------------------------TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180 (276)
T ss_dssp -----------------------------------------SEEECCCCCSCC------------CCCCGGGCCHHHHTT
T ss_pred -----------------------------------------CEEEccccceeeccccCCcccccccccCcccCCHHHHhc
Confidence 499999999876532 1234578999999999975
Q ss_pred C---CCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 259 A---GYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 259 ~---~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
. +++.++|||||||++|||++|+.||.+.+ ....+...... +..+..
T Consensus 181 ~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~------~~~~~~~~~~~-~~~~p~----------------------- 230 (276)
T d1uwha_ 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN------NRDQIIFMVGR-GYLSPD----------------------- 230 (276)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHH-TSCCCC-----------------------
T ss_pred ccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC------hHHHHHHHHhc-CCCCCc-----------------------
Confidence 3 47899999999999999999999997654 23333222221 111110
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+..++..+.+||.+||..||.+|||++|++++
T Consensus 231 ------------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 231 ------------LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp ------------GGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ------------chhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 011234566789999999999999999999999876
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.3e-48 Score=352.79 Aligned_cols=246 Identities=17% Similarity=0.274 Sum_probs=189.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc---eEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT---FVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|++.++||+|+||.||+|++..+++ .||||.+.... ...+.+.+|+.+|+.+ .||||++
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~HpnIv~ 91 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF--------------DHPNVIH 91 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC--------------CCTTBCC
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC--------------CCCCCcc
Confidence 689999999999999999999987764 58888876432 2345688999999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++++. .++.+++||||+ +|+|.+++.... ..+++.++..++.||+.||+|||++ +++||||||+|||++.++
T Consensus 92 l~g~~~----~~~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl~~~~ 165 (299)
T d1jpaa_ 92 LEGVVT----KSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNL 165 (299)
T ss_dssp EEEEEC----SSSSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTC
T ss_pred EEEEEe----eCCEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEECCCC
Confidence 999886 566799999999 778887776543 4589999999999999999999998 999999999999998776
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--------CCCCCCCCCCchh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--------FADEIQTRQYRSV 253 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--------~~~~~~t~~y~aP 253 (393)
.+||+|||+++..... .....+|+.|+||
T Consensus 166 -------------------------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aP 202 (299)
T d1jpaa_ 166 -------------------------------------------VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 202 (299)
T ss_dssp -------------------------------------------CEEECCC-----------------------CGGGSCH
T ss_pred -------------------------------------------cEEECCcccceEccCCCCcceeeecccccCCccccCH
Confidence 4999999999765322 1123568899999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|.+.+..++.++|||||||++|||++ |+.||.+.+ ....+..+.. +.
T Consensus 203 E~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~------~~~~~~~i~~--~~------------------------ 250 (299)
T d1jpaa_ 203 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT------NQDVINAIEQ--DY------------------------ 250 (299)
T ss_dssp HHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHT--TC------------------------
T ss_pred HHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC------------------------
Confidence 99999999999999999999999998 899997654 2222222211 11
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.+||.+||..||.+|||+.|++++
T Consensus 251 ---------------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 251 ---------------RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp ---------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ---------------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 011234566788999999999999999999888764
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-47 Score=354.09 Aligned_cols=255 Identities=21% Similarity=0.340 Sum_probs=206.4
Q ss_pred CeEEEEEEecccCceEEEEEEeC---CCCceEEEEEEecc-----cccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDL---QDKTFVALKIVKSD-----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
++|+++++||+|+||.||+|++. .+|+.||||+++.. ....+.+.+|+.+++.+. .|+|
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~-------------h~pn 90 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-------------QSPF 90 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH-------------TCTT
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhcc-------------CCCe
Confidence 57999999999999999999874 46889999998643 223466889999999993 2378
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEe
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMC 178 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~ 178 (393)
|+++++.+. .....+++|||+ +++|...+.... .+++..+..++.||+.||+|||++ +++||||||+||+++
T Consensus 91 Iv~~~~~~~----~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~ 163 (322)
T d1vzoa_ 91 LVTLHYAFQ----TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLD 163 (322)
T ss_dssp BCCEEEEEE----ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEC
T ss_pred EEEeeeeec----cCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeec
Confidence 999998887 566899999999 789999887764 478899999999999999999998 999999999999998
Q ss_pred echhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC----CCCCCCCCCCCchhH
Q psy12288 179 VDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD----HFADEIQTRQYRSVE 254 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~t~~y~aPE 254 (393)
.++ .++|+|||++..... ......|++.|++||
T Consensus 164 ~~~-------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe 200 (322)
T d1vzoa_ 164 SNG-------------------------------------------HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 200 (322)
T ss_dssp TTS-------------------------------------------CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHH
T ss_pred CCC-------------------------------------------CEEEeeccchhhhcccccccccccccccccchhH
Confidence 776 499999999876532 233457899999999
Q ss_pred HHhcCC--CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 255 VLIGAG--YGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 255 ~~~~~~--~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
.+.+.. ++.++|||||||++|+|++|+.||.+.+... ....+...
T Consensus 201 ~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~---~~~~i~~~------------------------------ 247 (322)
T d1vzoa_ 201 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---SQAEISRR------------------------------ 247 (322)
T ss_dssp HHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC---CHHHHHHH------------------------------
T ss_pred HhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHh------------------------------
Confidence 998754 6889999999999999999999998765432 11111111
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCc-----CHHHHhcCCCCCCC
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRA-----SAADCLRHPWLNPR 389 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~ell~hp~~~~~ 389 (393)
.......++...+..+.+||++||..||.+|| |++|+++||||+++
T Consensus 248 -----------~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 248 -----------ILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp -----------HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred -----------cccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 11122234456778999999999999999999 58999999999875
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-47 Score=346.84 Aligned_cols=241 Identities=18% Similarity=0.279 Sum_probs=190.5
Q ss_pred EEecccCceEEEEEEeCC--CCceEEEEEEecccc---cchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccce
Q psy12288 34 RKLGWGHFSTVWLSWDLQ--DKTFVALKIVKSDQV---YADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFK 108 (393)
Q Consensus 34 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (393)
++||+|+||.||+|.+.. +++.||||+++.... ..+.+.+|+.+|+.+ .||||+++++++.
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l--------------~HpnIv~~~g~~~ 78 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL--------------DNPYIVRMIGICE 78 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC--------------CCTTBCCEEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC--------------CCCCCceEEEEec
Confidence 369999999999997654 457899999874322 245688999999998 8999999999875
Q ss_pred eecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhHh
Q psy12288 109 IYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRRM 187 (393)
Q Consensus 109 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~ 187 (393)
.+ ..++||||+ +|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++
T Consensus 79 ----~~-~~~lvmE~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~~------ 144 (277)
T d1xbba_ 79 ----AE-SWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQH------ 144 (277)
T ss_dssp ----SS-SEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETT------
T ss_pred ----cC-CEEEEEEcCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhcccccC------
Confidence 22 368999999 78999888765 3489999999999999999999998 999999999999998877
Q ss_pred hhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhHHHhcCCC
Q psy12288 188 ARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVEVLIGAGY 261 (393)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~ 261 (393)
.+|++|||+++..... .....||+.|+|||++.+..+
T Consensus 145 -------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~ 187 (277)
T d1xbba_ 145 -------------------------------------YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187 (277)
T ss_dssp -------------------------------------EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEE
T ss_pred -------------------------------------cccccchhhhhhccccccccccccccCCCceecCchhhcCCCC
Confidence 5999999999765322 223468899999999999999
Q ss_pred CchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcch
Q psy12288 262 GPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWG 340 (393)
Q Consensus 262 ~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (393)
+.++|||||||++|||++ |+.||.+.+ .......+.. |.
T Consensus 188 ~~~sDiwS~Gv~l~ellt~g~~Pf~~~~------~~~~~~~i~~--~~-------------------------------- 227 (277)
T d1xbba_ 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEK--GE-------------------------------- 227 (277)
T ss_dssp EHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--TC--------------------------------
T ss_pred CchhhhccchhhhhHHhhCCCCCCCCCC------HHHHHHHHHc--CC--------------------------------
Confidence 999999999999999998 899997644 2222221111 11
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHh---cCCCC
Q psy12288 341 LYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCL---RHPWL 386 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell---~hp~~ 386 (393)
..+++...+..+.+||.+||+.||++|||+++++ +|+|+
T Consensus 228 -------~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 269 (277)
T d1xbba_ 228 -------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269 (277)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence 1123355677899999999999999999999984 56554
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-47 Score=341.70 Aligned_cols=245 Identities=16% Similarity=0.265 Sum_probs=189.8
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC---ceEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCccccccee
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK---TFVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIR 102 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~ 102 (393)
++|++.+.||+|+||.||+|.+..++ ..||||.++.. ....+.+.+|+.+++.+ .||||++
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l--------------~HpnIv~ 72 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--------------DHPHIVK 72 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC--------------CCTTBCC
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhC--------------CCCCEee
Confidence 68999999999999999999987654 46888887643 22346678999999998 8999999
Q ss_pred ccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeech
Q psy12288 103 LLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDY 181 (393)
Q Consensus 103 ~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~ 181 (393)
+++.+. .+.+++||||+ +|++.+++.... ..+++..++.++.||+.||+|||++ +++||||||+||+++.++
T Consensus 73 l~~~~~-----~~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~~ 145 (273)
T d1mp8a_ 73 LIGVIT-----ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSND 145 (273)
T ss_dssp EEEEEC-----SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETT
T ss_pred EEEEEe-----cCeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCCC
Confidence 999874 34588999999 778887765543 4589999999999999999999998 999999999999998877
Q ss_pred hHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----CCCCCCCCCCchhHHHh
Q psy12288 182 DKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||+++..... .....||+.|+|||++.
T Consensus 146 -------------------------------------------~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~ 182 (273)
T d1mp8a_ 146 -------------------------------------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182 (273)
T ss_dssp -------------------------------------------EEEECC-------------------CCGGGCCHHHHH
T ss_pred -------------------------------------------cEEEccchhheeccCCcceeccceecCcccchhhHhc
Confidence 5999999999865422 23346789999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCC
Q psy12288 258 GAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNL 336 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (393)
+..++.++|||||||++|||++ |.+||.+.+. ......+.. +.
T Consensus 183 ~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~------~~~~~~i~~--~~---------------------------- 226 (273)
T d1mp8a_ 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIEN--GE---------------------------- 226 (273)
T ss_dssp HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG------GGHHHHHHT--TC----------------------------
T ss_pred cCCCCCccccccchHHHHHHHhcCCCCCCCCCH------HHHHHHHHc--CC----------------------------
Confidence 9999999999999999999998 8999976552 222222211 11
Q ss_pred CcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 337 KPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+++...+..+.+||.+||+.||.+|||++||++|
T Consensus 227 -----------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 227 -----------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp -----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 112345567789999999999999999999999876
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-46 Score=342.83 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=193.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCc----eEEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKT----FVALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
++|+++++||+|+||.||+|.+..+++ .||+|.++.. ....+.+.+|+.+++.+ .||||+
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------~HpnIv 74 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV--------------DNPHVC 74 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHC--------------CCTTBC
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhC--------------CCCCEe
Confidence 369999999999999999999988876 5888887643 23346788999999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++++. ++. .+++++++ +++|.+.+.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+
T Consensus 75 ~l~g~~~----~~~-~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~ 147 (317)
T d1xkka_ 75 RLLGICL----TST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTP 147 (317)
T ss_dssp CEEEEEE----SSS-EEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEET
T ss_pred eEEEEEe----cCC-eeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCC
Confidence 9999886 333 45666766 889988876653 4589999999999999999999998 99999999999999887
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCCCCCCchhHH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQTRQYRSVEV 255 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~t~~y~aPE~ 255 (393)
+ .+||+|||+++..... .....||+.|+|||+
T Consensus 148 ~-------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~ 184 (317)
T d1xkka_ 148 Q-------------------------------------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184 (317)
T ss_dssp T-------------------------------------------EEEECCCSHHHHTTTTCC--------CCTTTSCHHH
T ss_pred C-------------------------------------------CeEeeccccceecccccccccccccccCccccChHH
Confidence 7 5999999998865332 223357999999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 256 LIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
+.+..++.++|||||||++|||++ |.+||.+.+. ..... ++.. |.
T Consensus 185 l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~------~~~~~-~i~~-~~-------------------------- 230 (317)
T d1xkka_ 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------SEISS-ILEK-GE-------------------------- 230 (317)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG------GGHHH-HHHH-TC--------------------------
T ss_pred HhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH------HHHHH-HHHc-CC--------------------------
Confidence 999999999999999999999998 8899875542 11111 1111 11
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+.+...+..+.+||.+||..||.+|||+.|+++|
T Consensus 231 -------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 231 -------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp -------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -------------CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 112334566788999999999999999999999987
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-46 Score=337.10 Aligned_cols=246 Identities=17% Similarity=0.227 Sum_probs=188.0
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCC----ceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccce
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDK----TFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVI 101 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~ 101 (393)
+.|++.++||+|+||.||+|.+..++ ..||||.+.... .....+.+|+.+++.+ .|+||+
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l--------------~H~nIv 72 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF--------------SHHNII 72 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC--------------CCTTBC
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhc--------------CCCCEe
Confidence 46999999999999999999887654 469999986432 2234578899999999 899999
Q ss_pred eccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeec
Q psy12288 102 RLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVD 180 (393)
Q Consensus 102 ~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~ 180 (393)
++++.+. .....++|||++ ++++.+.+.... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 73 ~~~g~~~----~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~ 146 (283)
T d1mqba_ 73 RLEGVIS----KYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSN 146 (283)
T ss_dssp CEEEEEC----SSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred eeeEEEe----cCCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCC
Confidence 9999887 566789999999 667776665543 4589999999999999999999998 99999999999999877
Q ss_pred hhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchhH
Q psy12288 181 YDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSVE 254 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aPE 254 (393)
+ .+||+|||+++..... .....||+.|+|||
T Consensus 147 ~-------------------------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE 183 (283)
T d1mqba_ 147 L-------------------------------------------VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 183 (283)
T ss_dssp C-------------------------------------------CEEECCCCC-----------------CCCGGGSCHH
T ss_pred C-------------------------------------------eEEEcccchhhcccCCCccceEeccCCCCccccCHH
Confidence 6 4999999999765322 12345789999999
Q ss_pred HHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeecc
Q psy12288 255 VLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRID 334 (393)
Q Consensus 255 ~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
++.+..++.++|||||||++|||+++..||..... ....+..+.. |.
T Consensus 184 ~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~-----~~~~~~~i~~--~~-------------------------- 230 (283)
T d1mqba_ 184 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----NHEVMKAIND--GF-------------------------- 230 (283)
T ss_dssp HHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHT--TC--------------------------
T ss_pred HHccCCCCCcccccccHHHHHHHHhCCCCccccCC-----HHHHHHHHhc--cC--------------------------
Confidence 99999999999999999999999996555533221 1111111111 10
Q ss_pred CCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 335 NLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..+.+...+..+.+||.+||..||++|||+.|+++
T Consensus 231 -------------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 231 -------------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp -------------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------------CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 11223456678899999999999999999999876
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-46 Score=337.41 Aligned_cols=245 Identities=18% Similarity=0.250 Sum_probs=191.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
++|++.++||+|+||.||+|.. +++.||||+++.+ ...+.+.+|+.+++.+ .|+||+++++.+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~-~~~~~~~~E~~~l~~l--------------~HpnIv~~~g~~ 69 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-ATAQAFLAEASVMTQL--------------RHSNLVQLLGVI 69 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-C--HHHHHTHHHHTTC--------------CCTTBCCEEEEE
T ss_pred HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcH-HHHHHHHHHHHHHHhC--------------CCCCEeeEEEEE
Confidence 4799999999999999999987 4778999999754 3457789999999998 899999999977
Q ss_pred eeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHhH
Q psy12288 108 KIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVRR 186 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~ 186 (393)
.. ..+.+++||||+ +|+|.+++.......+++..++.++.||+.||+|||+. +++||||||+||+++.++
T Consensus 70 ~~---~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~~~----- 140 (262)
T d1byga_ 70 VE---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDN----- 140 (262)
T ss_dssp CC---C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTS-----
T ss_pred Ee---cCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecCCC-----
Confidence 41 334579999999 88999998654333488999999999999999999998 999999999999998777
Q ss_pred hhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCCchhHHHhcCCCCchhh
Q psy12288 187 MARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQYRSVEVLIGAGYGPAAD 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 266 (393)
.++++|||+++..........+|..|+|||++.+..++.++|
T Consensus 141 --------------------------------------~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sD 182 (262)
T d1byga_ 141 --------------------------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 182 (262)
T ss_dssp --------------------------------------CEEECCCCC------------CCTTTSCHHHHHHCCCCHHHH
T ss_pred --------------------------------------CEeecccccceecCCCCccccccccCCChHHHhCCCCChHHH
Confidence 499999999987766666667899999999999999999999
Q ss_pred HHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCCcchhHHHH
Q psy12288 267 IWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVL 345 (393)
Q Consensus 267 iwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (393)
||||||++|||++ |++||...+ .......+.. +
T Consensus 183 IwSfG~il~el~t~~~~p~~~~~------~~~~~~~i~~--~-------------------------------------- 216 (262)
T d1byga_ 183 VWSFGILLWEIYSFGRVPYPRIP------LKDVVPRVEK--G-------------------------------------- 216 (262)
T ss_dssp HHHHHHHHHHHHTTSCCSCTTSC------GGGHHHHHTT--T--------------------------------------
T ss_pred HHhHHHHHHHHHHCCCCCCCCCC------HHHHHHHHHc--C--------------------------------------
Confidence 9999999999998 788886544 2222211100 0
Q ss_pred hhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 346 TEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
.+.+++...++.+.+||++||..||.+|||+.+++++
T Consensus 217 -~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 217 -YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -CCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 1122345566789999999999999999999999875
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.4e-45 Score=335.38 Aligned_cols=260 Identities=22% Similarity=0.263 Sum_probs=197.2
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec-cc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL-LN 105 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~-~~ 105 (393)
+++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+..|+.+++.+ .|++++.. ..
T Consensus 6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l--------------~~~~~i~~~~~ 70 (299)
T d1ckia_ 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM--------------QGGVGIPTIRW 70 (299)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHS--------------TTSTTCCCEEE
T ss_pred CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHc--------------cCCCcccEEEE
Confidence 458999999999999999999999999999999887543 346788999999998 34443333 33
Q ss_pred cceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHHh
Q psy12288 106 DFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKVR 185 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~~ 185 (393)
.+. .+...++|||++++++...+.... ..+++..+..++.|++.||+|||++ ||+||||||+|||++..+.
T Consensus 71 ~~~----~~~~~~ivme~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~--- 141 (299)
T d1ckia_ 71 CGA----EGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKK--- 141 (299)
T ss_dssp EEE----ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGG---
T ss_pred EEe----cCCEEEEEEEEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCC---
Confidence 333 566789999999999888776543 4599999999999999999999998 9999999999999865432
Q ss_pred HhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchhHH
Q psy12288 186 RMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSVEV 255 (393)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aPE~ 255 (393)
...++++|||+++..... .....||+.|+|||.
T Consensus 142 -------------------------------------~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 184 (299)
T d1ckia_ 142 -------------------------------------GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184 (299)
T ss_dssp -------------------------------------TTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHH
T ss_pred -------------------------------------CceeeeeccCcceeccccccccceeccccCCcCCCccccCHHH
Confidence 125999999999865422 223478999999999
Q ss_pred HhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccC
Q psy12288 256 LIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDN 335 (393)
Q Consensus 256 ~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
+.+.+++.++|||||||++|+|++|+.||........... ........-..|.+
T Consensus 185 ~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~---~~~~~~~~~~~~~~----------------------- 238 (299)
T d1ckia_ 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTPIE----------------------- 238 (299)
T ss_dssp HTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC----------HHHHHHHHHHSCHH-----------------------
T ss_pred HhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH---HHHhhcccCCCChh-----------------------
Confidence 9999999999999999999999999999986654322111 11111100000110
Q ss_pred CCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHH---HHhcCCCCC
Q psy12288 336 LKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAA---DCLRHPWLN 387 (393)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~---ell~hp~~~ 387 (393)
......+.++.+||.+||..||.+||+++ ++|+|+|.+
T Consensus 239 --------------~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~ 279 (299)
T d1ckia_ 239 --------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279 (299)
T ss_dssp --------------HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------------HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence 11234567889999999999999999986 556776543
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-45 Score=339.48 Aligned_cols=250 Identities=20% Similarity=0.272 Sum_probs=187.1
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.++||+|+||.||+|.+.. +++.||||+++... .....+.+|...+..+. .|+|+
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~-------------~h~~i 79 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-------------HHLNV 79 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC-------------CCTTB
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc-------------CCCeE
Confidence 589999999999999999998754 35689999987432 22345667778787773 56778
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCe
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQCRI 165 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~~~i 165 (393)
+.+++.+. ..+..+++||||+ +|+|.+++.... ...+++.++..++.|++.||+|||++ +|
T Consensus 80 v~~~~~~~---~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~i 155 (299)
T d1ywna1 80 VNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KC 155 (299)
T ss_dssp CCEEEEEC---STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred EEeeeeec---cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 77776654 2455689999999 789999886432 13478999999999999999999998 99
Q ss_pred eeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----
Q psy12288 166 IHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----- 240 (393)
Q Consensus 166 ~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----- 240 (393)
+||||||+|||++.++ .+||+|||+++.....
T Consensus 156 vHrDlKp~NILl~~~~-------------------------------------------~~Kl~DFGla~~~~~~~~~~~ 192 (299)
T d1ywna1 156 IHRDLAARNILLSEKN-------------------------------------------VVKICDFGLARDIYKDPDYVR 192 (299)
T ss_dssp CCSCCCGGGEEECGGG-------------------------------------------CEEECC------CCSCTTSCC
T ss_pred cCCcCCccceeECCCC-------------------------------------------cEEEccCcchhhccccccccc
Confidence 9999999999998776 4999999999754322
Q ss_pred CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcc
Q psy12288 241 FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATG-DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKK 319 (393)
Q Consensus 241 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 319 (393)
.....||+.|+|||++.+..++.++|||||||++|||++| .+||..... ...+...... |.
T Consensus 193 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~------~~~~~~~~~~-~~----------- 254 (299)
T d1ywna1 193 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI------DEEFCRRLKE-GT----------- 254 (299)
T ss_dssp TTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC------SHHHHHHHHH-TC-----------
T ss_pred cCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH------HHHHHHHHhc-CC-----------
Confidence 2234689999999999999999999999999999999986 567765442 1222222111 11
Q ss_pred cccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 320 TLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
....+...++.+.++|.+||+.||.+|||++|+++|
T Consensus 255 ----------------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 255 ----------------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp ----------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----------------------------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 112334566788999999999999999999999987
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=3.1e-44 Score=328.31 Aligned_cols=261 Identities=18% Similarity=0.242 Sum_probs=202.6
Q ss_pred CeeCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 24 DLFNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
|+++.+|++.++||+|+||.||+|++..+++.||||++... .....+.+|++.++.+. .+++++.+
T Consensus 1 ~vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~~~~e~~~~~~l~-------------~~~~i~~~ 66 (293)
T d1csna_ 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLA-------------GCTGIPNV 66 (293)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTT-------------TCTTCCCE
T ss_pred CCCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccc-cCcHHHHHHHHHHHHhc-------------CCCCCCEE
Confidence 46788999999999999999999999999999999988654 34567889999999994 34667777
Q ss_pred cccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhH
Q psy12288 104 LNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDK 183 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~ 183 (393)
.+.+. .+...++|||+++++|.+.+.... ..++..++..++.|++.||++||++ ||+||||||+|||++.+...
T Consensus 67 ~~~~~----~~~~~~~vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~ 140 (293)
T d1csna_ 67 YYFGQ----EGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSK 140 (293)
T ss_dssp EEEEE----ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSST
T ss_pred EEEee----cCCccEEEEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccc
Confidence 76665 567889999999999998886543 4589999999999999999999998 99999999999999754310
Q ss_pred HhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC----------CCCCCCCCCCchh
Q psy12288 184 VRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH----------FADEIQTRQYRSV 253 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~t~~y~aP 253 (393)
....++|+|||+++..... ....+||+.|+||
T Consensus 141 --------------------------------------~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aP 182 (293)
T d1csna_ 141 --------------------------------------NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 182 (293)
T ss_dssp --------------------------------------TTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred --------------------------------------cCCceEEcccceeEEcccCccccceeecccCceEEchhhcCH
Confidence 0125999999999765321 2234799999999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeec
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRI 333 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
|++.+..++.++|||||||++|+|++|+.||.+..... .......+....-..|...
T Consensus 183 E~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~~-------------------- 239 (293)
T d1csna_ 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT---NKQKYERIGEKKQSTPLRE-------------------- 239 (293)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC---HHHHHHHHHHHHHHSCHHH--------------------
T ss_pred HHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchh---HHHHHHHHHhccCCCChHH--------------------
Confidence 99999999999999999999999999999997655332 2222222211110011100
Q ss_pred cCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 334 DNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
+....++++.+++..|+..+|.+||+.+.+.+
T Consensus 240 -----------------l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 240 -----------------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp -----------------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred -----------------hcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 11234567889999999999999999776543
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-45 Score=332.15 Aligned_cols=245 Identities=21% Similarity=0.227 Sum_probs=187.9
Q ss_pred CeEEEEEEecccCceEEEEEEeCCC-C--ceEEEEEEecc----cccchhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQD-K--TFVALKIVKSD----QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~-~--~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.+.||+|+||.||+|+...+ + ..||||+++.. ....+.+.+|+.+|+.+ .|+||
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l--------------~H~nI 73 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL--------------DHRNL 73 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC--------------CCTTB
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC--------------CCCCE
Confidence 4699999999999999999986543 3 36899988643 22245678999999999 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEee
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCV 179 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~ 179 (393)
+++++.+. + ...++||||+ ++++.+.+.... ..+++..++.++.|++.||.|||++ +|+||||||+||+++.
T Consensus 74 v~~~g~~~----~-~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~ 146 (273)
T d1u46a_ 74 IRLYGVVL----T-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLAT 146 (273)
T ss_dssp CCEEEEEC----S-SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEE
T ss_pred EEEEEEEe----e-cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhcccc
Confidence 99999885 2 2468999999 788887776543 3499999999999999999999998 9999999999999988
Q ss_pred chhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC------CCCCCCCCCCchh
Q psy12288 180 DYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH------FADEIQTRQYRSV 253 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~------~~~~~~t~~y~aP 253 (393)
++ .+||+|||+++..... .....+|..|+||
T Consensus 147 ~~-------------------------------------------~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aP 183 (273)
T d1u46a_ 147 RD-------------------------------------------LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183 (273)
T ss_dssp TT-------------------------------------------EEEECCCTTCEECCC-CCEEEC-----CCGGGCCH
T ss_pred cc-------------------------------------------ceeeccchhhhhcccCCCcceecCccccCcccCCH
Confidence 77 5999999999865332 1233567899999
Q ss_pred HHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeee
Q psy12288 254 EVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRR 332 (393)
Q Consensus 254 E~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
|++.+..++.++|||||||++|||++ |+.||.+.+ ..+.+..+... +..
T Consensus 184 E~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~------~~~~~~~i~~~-~~~----------------------- 233 (273)
T d1u46a_ 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILHKIDKE-GER----------------------- 233 (273)
T ss_dssp HHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTS-CCC-----------------------
T ss_pred HHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC------HHHHHHHHHhC-CCC-----------------------
Confidence 99999999999999999999999998 899997655 33333322211 110
Q ss_pred ccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 333 IDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+||.+||..||.+|||++||++
T Consensus 234 ----------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 234 ----------------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp ----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----------------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 1123455678899999999999999999999874
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-44 Score=332.34 Aligned_cols=247 Identities=19% Similarity=0.289 Sum_probs=196.4
Q ss_pred CCeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.+.||+|+||.||+|+... +++.||||+++... ...+.+.+|+.+++.+ .|+|
T Consensus 12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l--------------~h~n 77 (301)
T d1lufa_ 12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF--------------DNPN 77 (301)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC--------------CCTT
T ss_pred HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc--------------CCCC
Confidence 3589999999999999999998753 46789999987533 2245688999999998 8999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHH
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD----------------------YKGIHIQNVRTIIKQVLEGL 156 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------------~~~l~~~~~~~i~~ql~~~l 156 (393)
++++++.+. .....+++||++ +++|.+++.... ...++...+..++.|++.||
T Consensus 78 iv~~~~~~~----~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl 153 (301)
T d1lufa_ 78 IVKLLGVCA----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM 153 (301)
T ss_dssp BCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred cccceeeec----cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHh
Confidence 999999887 566789999999 789888875422 22378889999999999999
Q ss_pred HHhhhcCCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCcccc
Q psy12288 157 NYLHTQCRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACW 236 (393)
Q Consensus 157 ~~lH~~~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~ 236 (393)
+|||++ +++||||||+|||++.++ .+||+|||+++.
T Consensus 154 ~ylH~~-~ivHrDlKp~NILld~~~-------------------------------------------~~Kl~DFGls~~ 189 (301)
T d1lufa_ 154 AYLSER-KFVHRDLATRNCLVGENM-------------------------------------------VVKIADFGLSRN 189 (301)
T ss_dssp HHHHHT-TCCCSCCSGGGEEECGGG-------------------------------------------CEEECCCSCHHH
T ss_pred hhcccC-CeEeeEEcccceEECCCC-------------------------------------------cEEEccchhhee
Confidence 999998 999999999999998776 499999999875
Q ss_pred ccC-----CCCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy12288 237 IDD-----HFADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELATGD-YLFDPKAGKEYSRDDDHLAHIVELVGPIP 310 (393)
Q Consensus 237 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~-~pf~~~~~~~~~~~~~~~~~~~~~~g~~p 310 (393)
... ......+|+.|+|||.+.+..++.++|||||||++|||++|. +||...+ ..+.+..+.+ +..
T Consensus 190 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~------~~e~~~~v~~--~~~- 260 (301)
T d1lufa_ 190 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA------HEEVIYYVRD--GNI- 260 (301)
T ss_dssp HTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHT--TCC-
T ss_pred ccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC------HHHHHHHHHc--CCC-
Confidence 422 123456789999999999999999999999999999999985 5776544 2222222211 111
Q ss_pred hHHHhcCcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 311 KEVLSQGKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
.+.+...+..+.+||.+||+.||.+|||+.||++
T Consensus 261 --------------------------------------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 261 --------------------------------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp --------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------------------------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 1123456678899999999999999999999975
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-44 Score=331.11 Aligned_cols=248 Identities=21% Similarity=0.297 Sum_probs=193.9
Q ss_pred CCeEEEEEEecccCceEEEEEEeCCCC-------ceEEEEEEecccc--cchhhHHHHHHHHHhcccCCCCcccccCccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDLQDK-------TFVALKIVKSDQV--YADTARDEIVLLKAVGRKSNVHSSAYNTQAS 97 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 97 (393)
.++|++.+.||+|+||.||+|+...++ ..||||+++.+.. ....+.+|...+..+. .|
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~-------------~H 78 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-------------KH 78 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC-------------CC
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc-------------CC
Confidence 468999999999999999999876654 3799999875433 3356677888888873 69
Q ss_pred ccceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 98 EKVIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD--------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 98 ~~i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
+||+++++++. .+...++||||+ +|++.+++.... ...+++.++..++.||+.||+|||++
T Consensus 79 pnIv~~~~~~~----~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~ 154 (299)
T d1fgka_ 79 KNIINLLGACT----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK 154 (299)
T ss_dssp TTBCCEEEEEC----SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEecccccc----cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC
Confidence 99999999997 567799999999 889999886543 23489999999999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
+++||||||+|||++.++ .+||+|||+++.....
T Consensus 155 -~ivHrDiKp~NiLl~~~~-------------------------------------------~~kl~dfg~~~~~~~~~~ 190 (299)
T d1fgka_ 155 -KCIHRDLAARNVLVTEDN-------------------------------------------VMKIADFGLARDIHHIDY 190 (299)
T ss_dssp -TCCCSCCSGGGEEECTTC-------------------------------------------CEEECSTTCCCCGGGCCT
T ss_pred -CEEeeeecccceeecCCC-------------------------------------------CeEeccchhhcccccccc
Confidence 999999999999998776 4999999998865432
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....+|+.|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+ ..... ..+.. +..
T Consensus 191 ~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~------~~~~~-~~i~~-~~~------- 255 (299)
T d1fgka_ 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELF-KLLKE-GHR------- 255 (299)
T ss_dssp TCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHH-HHHHT-TCC-------
T ss_pred ccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC------HHHHH-HHHHc-CCC-------
Confidence 223467889999999999999999999999999999998 788886544 11111 11111 111
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
..++...+..+.+||.+||+.||++|||+.|+++
T Consensus 256 --------------------------------~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 256 --------------------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp --------------------------------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------------------------------CCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 1123445678899999999999999999999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=333.10 Aligned_cols=248 Identities=20% Similarity=0.234 Sum_probs=196.2
Q ss_pred CeEEEEEEecccCceEEEEEEeCCCCce--EEEEEEecc--cccchhhHHHHHHHHHhcccCCCCcccccCcccccceec
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQDKTF--VALKIVKSD--QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRL 103 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~ 103 (393)
++|++.++||+|+||.||+|.+..++.. ||||.+... ....+.+.+|+.+|..+. .|+||+++
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-------------~HpnIv~~ 76 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-------------HHPNIINL 76 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC-------------CCTTBCCE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhcc-------------CCCCEeeE
Confidence 5799999999999999999999888774 677877532 234567889999999872 59999999
Q ss_pred cccceeecCCCeEEEEEEeec-cccHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeec
Q psy12288 104 LNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--------------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHT 168 (393)
Q Consensus 104 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--------------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~ 168 (393)
++++. ..+..++||||+ +|+|.+++... ....+++..+..++.||+.||.|||++ +++||
T Consensus 77 ~~~~~----~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHr 151 (309)
T d1fvra_ 77 LGACE----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHR 151 (309)
T ss_dssp EEEEE----ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred EEEEe----cCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-Ccccc
Confidence 99987 567899999999 78999988643 234589999999999999999999998 99999
Q ss_pred cCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--CCCCCC
Q psy12288 169 DIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH--FADEIQ 246 (393)
Q Consensus 169 dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~ 246 (393)
||||+|||++.++ .+||+|||+++..... .....+
T Consensus 152 Dlkp~NIL~~~~~-------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~g 188 (309)
T d1fvra_ 152 DLAARNILVGENY-------------------------------------------VAKIADFGLSRGQEVYVKKTMGRL 188 (309)
T ss_dssp CCSGGGEEECGGG-------------------------------------------CEEECCTTCEESSCEECCC----C
T ss_pred ccccceEEEcCCC-------------------------------------------ceEEccccccccccccccccceec
Confidence 9999999998776 4999999998765432 223468
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhCC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATGD-YLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g~-~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
|..|+|||.+.+..++.++|||||||++|||++|. +||.+.+ ..+....+.. +.
T Consensus 189 t~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~------~~~~~~~i~~--~~----------------- 243 (309)
T d1fvra_ 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQ--GY----------------- 243 (309)
T ss_dssp CTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHGGG--TC-----------------
T ss_pred CCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC------HHHHHHHHHh--cC-----------------
Confidence 99999999999999999999999999999999965 5675443 1111111100 10
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
+.+.+...++.+.+||.+||+.||++|||++|+++|
T Consensus 244 ----------------------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 244 ----------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp ----------------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----------------------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 112334566789999999999999999999999986
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-44 Score=328.25 Aligned_cols=264 Identities=20% Similarity=0.217 Sum_probs=190.3
Q ss_pred eCCeEEEEEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 26 FNFRYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
|+++|.+.++||+|+||.||+|+. +|+.||||++.... ......|.+++.... ..|+||+++++
T Consensus 1 ~~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~--~~~~~~e~ei~~~~~------------~~HpnIv~~~~ 64 (303)
T d1vjya_ 1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVM------------LRHENILGFIA 64 (303)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHTSTT------------CCCTTBCCEEE
T ss_pred CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc--hhHHHHHHHHHHHhh------------CCCCcCcceEE
Confidence 457899999999999999999976 68899999987543 233334443332211 17999999999
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhh--------cCCeeeccCCCCceE
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHT--------QCRIIHTDIKPENIL 176 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~--------~~~i~H~dlkp~NIl 176 (393)
.+.........+++||||+ +|+|...+.+. +++++.+..++.|++.||+|+|+ + ||+||||||+|||
T Consensus 65 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~-~IvHrDlKp~NIL 140 (303)
T d1vjya_ 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNIL 140 (303)
T ss_dssp EEEEECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCCGGGEE
T ss_pred EEEeCCCcceEEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CeeccccCccceE
Confidence 9987666667899999999 78999888764 48899999999999999999996 4 8999999999999
Q ss_pred EeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccC-------CCCCCCCCCC
Q psy12288 177 MCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDD-------HFADEIQTRQ 249 (393)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~-------~~~~~~~t~~ 249 (393)
++.++ .+||+|||++..... ......||+.
T Consensus 141 l~~~~-------------------------------------------~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~ 177 (303)
T d1vjya_ 141 VKKNG-------------------------------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177 (303)
T ss_dssp ECTTS-------------------------------------------CEEECCCTTCEEEETTTTEECC----CCSCGG
T ss_pred EcCCC-------------------------------------------CeEEEecCccccccCCCcceeccccceecccC
Confidence 98776 499999999876532 1234578999
Q ss_pred CchhHHHhcCC------CCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCC-----cHHHHHHHHHHhCCCChHHHhcCc
Q psy12288 250 YRSVEVLIGAG------YGPAADIWSTACMAFELATGDYLFDPKAGKEYSR-----DDDHLAHIVELVGPIPKEVLSQGK 318 (393)
Q Consensus 250 y~aPE~~~~~~------~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~g~~p~~~~~~~~ 318 (393)
|+|||++.+.. ++.++|||||||++|||++|..||...+...... .......+....-.
T Consensus 178 y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 247 (303)
T d1vjya_ 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE---------- 247 (303)
T ss_dssp GCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT----------
T ss_pred cCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhc----------
Confidence 99999987642 4678999999999999999998885433221100 00001111110000
Q ss_pred ccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 319 KTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
..+++ . . + ....+.+....+.+|+.+||..||++|||+.|++++
T Consensus 248 ---~~~~p-----~---~-~---------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 248 ---QKLRP-----N---I-P---------NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp ---SCCCC-----C---C-C---------GGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred ---cccCC-----C---C-C---------cccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 00000 0 0 0 000012345678899999999999999999999864
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=327.31 Aligned_cols=249 Identities=19% Similarity=0.280 Sum_probs=198.8
Q ss_pred CCeEEEEEEecccCceEEEEEEeC-----CCCceEEEEEEeccc--ccchhhHHHHHHHHHhcccCCCCcccccCccccc
Q psy12288 27 NFRYHVIRKLGWGHFSTVWLSWDL-----QDKTFVALKIVKSDQ--VYADTARDEIVLLKAVGRKSNVHSSAYNTQASEK 99 (393)
Q Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (393)
.++|++.++||+|+||.||+|.+. .+++.||||+++... .....+.+|+.+++.+. .|+|
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~-------------~Hpn 88 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-------------NHMN 88 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-------------CCTT
T ss_pred HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc-------------CCCC
Confidence 369999999999999999999853 456789999997543 23445788999999983 6999
Q ss_pred ceeccccceeecCCCeEEEEEEeec-cccHHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy12288 100 VIRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARSD----------------YKGIHIQNVRTIIKQVLEGLNYLHTQ 162 (393)
Q Consensus 100 i~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------~~~l~~~~~~~i~~ql~~~l~~lH~~ 162 (393)
|+++++.+. .....++||||+ ++++.+++.... ...+++..+..++.||+.||+|||++
T Consensus 89 Iv~~~g~~~----~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~ 164 (311)
T d1t46a_ 89 IVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 164 (311)
T ss_dssp BCCEEEEEC----SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEe----eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 999999987 566789999999 788888876532 22488899999999999999999998
Q ss_pred CCeeeccCCCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC--
Q psy12288 163 CRIIHTDIKPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-- 240 (393)
Q Consensus 163 ~~i~H~dlkp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-- 240 (393)
+++||||||+||+++.++ .++++|||.++.....
T Consensus 165 -~ivHrDLKp~NIl~~~~~-------------------------------------------~~ki~DfG~~~~~~~~~~ 200 (311)
T d1t46a_ 165 -NCIHRDLAARNILLTHGR-------------------------------------------ITKICDFGLARDIKNDSN 200 (311)
T ss_dssp -TCCCSCCSGGGEEEETTT-------------------------------------------EEEECCCGGGSCTTSCTT
T ss_pred -CeeecccccccccccccC-------------------------------------------cccccccchheeccCCCc
Confidence 999999999999998776 4999999999865432
Q ss_pred ---CCCCCCCCCCchhHHHhcCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhc
Q psy12288 241 ---FADEIQTRQYRSVEVLIGAGYGPAADIWSTACMAFELAT-GDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQ 316 (393)
Q Consensus 241 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 316 (393)
.....||+.|+|||++.+..++.++|||||||++|||++ |.+||...+ ....+..+... +..
T Consensus 201 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~------~~~~~~~~i~~-~~~------- 266 (311)
T d1t46a_ 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP------VDSKFYKMIKE-GFR------- 266 (311)
T ss_dssp SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------SSHHHHHHHHH-TCC-------
T ss_pred ceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhc-CCC-------
Confidence 223467999999999999999999999999999999998 666675544 22223322221 110
Q ss_pred CcccccccCCCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc
Q psy12288 317 GKKTLRYFTPQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR 382 (393)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 382 (393)
...+...+..+.+||.+||..||.+|||++||++
T Consensus 267 --------------------------------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 267 --------------------------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp --------------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------------------------------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 1122345678899999999999999999999885
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-44 Score=330.99 Aligned_cols=255 Identities=20% Similarity=0.299 Sum_probs=202.7
Q ss_pred CeEEEEEEecccCceEEEEEEeCC-----CCceEEEEEEeccccc--chhhHHHHHHHHHhcccCCCCcccccCcccccc
Q psy12288 28 FRYHVIRKLGWGHFSTVWLSWDLQ-----DKTFVALKIVKSDQVY--ADTARDEIVLLKAVGRKSNVHSSAYNTQASEKV 100 (393)
Q Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i 100 (393)
++|++.++||+|+||.||+|.+.. +++.||||+++..... ...+.+|+.+++.+ .|+||
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l--------------~h~nI 85 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF--------------NCHHV 85 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC--------------CCTTB
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc--------------CCCCE
Confidence 689999999999999999998753 3568999998754322 23467899999988 89999
Q ss_pred eeccccceeecCCCeEEEEEEeec-cccHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCC
Q psy12288 101 IRLLNDFKIYSRNGTHICMVFEVM-GYNLLRLIARS--------DYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIK 171 (393)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--------~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlk 171 (393)
+++++.+. .....++||||+ +|++.+++... ....++...+..++.|++.||.|||++ +|+|||||
T Consensus 86 v~~~~~~~----~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk 160 (308)
T d1p4oa_ 86 VRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLA 160 (308)
T ss_dssp CCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCS
T ss_pred eeeeeEEe----cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEc
Confidence 99999887 556789999999 88888877532 122367888999999999999999998 99999999
Q ss_pred CCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-----CCCCCC
Q psy12288 172 PENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-----FADEIQ 246 (393)
Q Consensus 172 p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~ 246 (393)
|+|||++.+. ++||+|||+++..... .....+
T Consensus 161 ~~NiLld~~~-------------------------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~ 197 (308)
T d1p4oa_ 161 ARNCMVAEDF-------------------------------------------TVKIGDFGMTRDIYETDYYRKGGKGLL 197 (308)
T ss_dssp GGGEEECTTC-------------------------------------------CEEECCTTCCCGGGGGGCEEGGGSSEE
T ss_pred CCceeecCCc-------------------------------------------eEEEeecccceeccCCcceeeccceec
Confidence 9999998776 4999999999765332 223467
Q ss_pred CCCCchhHHHhcCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccC
Q psy12288 247 TRQYRSVEVLIGAGYGPAADIWSTACMAFELATG-DYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFT 325 (393)
Q Consensus 247 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 325 (393)
|+.|+|||.+.+..++.++||||||+++|||++| .+||.+.+ ....+..+.. +.
T Consensus 198 t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~------~~~~~~~i~~--~~----------------- 252 (308)
T d1p4oa_ 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFVME--GG----------------- 252 (308)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHHHT--TC-----------------
T ss_pred ccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHh--CC-----------------
Confidence 8999999999999999999999999999999998 57776544 2222222211 11
Q ss_pred CCCCeeeccCCCcchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhc------CCCCCCCCC
Q psy12288 326 PQGNFRRIDNLKPWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLR------HPWLNPRRS 391 (393)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~~~~ 391 (393)
..+.+...+..+.++|.+||+.||.+|||++|+++ +|+|++..-
T Consensus 253 ----------------------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~~~~ 302 (308)
T d1p4oa_ 253 ----------------------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 302 (308)
T ss_dssp ----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCS
T ss_pred ----------------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcCCCC
Confidence 11123455678999999999999999999999998 788876543
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-43 Score=322.53 Aligned_cols=245 Identities=20% Similarity=0.270 Sum_probs=189.3
Q ss_pred EEEEEecccCceEEEEEEeCCCC---ceEEEEEEec--ccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccc
Q psy12288 31 HVIRKLGWGHFSTVWLSWDLQDK---TFVALKIVKS--DQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLN 105 (393)
Q Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~ 105 (393)
...++||+|+||.||+|.+..++ ..||||.++. +....+.+.+|+.+|+.+ .|+||+++++
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l--------------~HpnIv~~~g 95 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF--------------SHPNVLSLLG 95 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC--------------CCTTBCCCCE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC--------------CCCCEeEEeE
Confidence 34688999999999999987653 3689999864 233346789999999999 8999999998
Q ss_pred cceeecCCCeEEEEEEeec-cccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccCCCCceEEeechhHH
Q psy12288 106 DFKIYSRNGTHICMVFEVM-GYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDIKPENILMCVDYDKV 184 (393)
Q Consensus 106 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dlkp~NIl~~~~~~~~ 184 (393)
.+.. ..+..++||||+ ++++.+++... ...++...+..++.|++.||.|+|+. +|+||||||+|||++.++
T Consensus 96 ~~~~---~~~~~~lv~E~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~~~~--- 167 (311)
T d1r0pa_ 96 ICLR---SEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKF--- 167 (311)
T ss_dssp EEEE---TTTEEEEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTC---
T ss_pred EEEe---cCCceEEEEEEeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeECCCC---
Confidence 7652 345789999999 67777766544 34577888999999999999999998 999999999999998766
Q ss_pred hHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCC-------CCCCCCCCCCchhHHHh
Q psy12288 185 RRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDH-------FADEIQTRQYRSVEVLI 257 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~ 257 (393)
.+||+|||+++..... .....||..|+|||.+.
T Consensus 168 ----------------------------------------~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 207 (311)
T d1r0pa_ 168 ----------------------------------------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 207 (311)
T ss_dssp ----------------------------------------CEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHH
T ss_pred ----------------------------------------CEEEecccchhhccccccccceecccccccccccChHHHh
Confidence 4999999999765322 22346789999999999
Q ss_pred cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHHHHhCCCChHHHhcCcccccccCCCCCeeeccCCC
Q psy12288 258 GAGYGPAADIWSTACMAFELATGDYLFDPKAGKEYSRDDDHLAHIVELVGPIPKEVLSQGKKTLRYFTPQGNFRRIDNLK 337 (393)
Q Consensus 258 ~~~~~~~~DiwSlG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
+..++.++||||||+++|||++|..||....... +....+. .|..
T Consensus 208 ~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-----~~~~~i~--~g~~---------------------------- 252 (311)
T d1r0pa_ 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLL--QGRR---------------------------- 252 (311)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCSCC-----------CHHHHH--TTCC----------------------------
T ss_pred cCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-----HHHHHHH--cCCC----------------------------
Confidence 9999999999999999999999888875433111 0011110 1110
Q ss_pred cchhHHHHhhhccCChhhHHHHHHHHHhccccCCCCCcCHHHHhcC
Q psy12288 338 PWGLYQVLTEKYHWSKAEASDFADFLLPMLHVNQKLRASAADCLRH 383 (393)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 383 (393)
...+...++.+.+||.+||..||.+||++.|+++|
T Consensus 253 -----------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 253 -----------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp -----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----------CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 11223456788999999999999999999999998
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=5.7e-24 Score=180.79 Aligned_cols=163 Identities=17% Similarity=0.191 Sum_probs=109.9
Q ss_pred EEEEEEecccCceEEEEEEeCCCCceEEEEEEeccccc-------------------chhhHHHHHHHHHhcccCCCCcc
Q psy12288 30 YHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVY-------------------ADTARDEIVLLKAVGRKSNVHSS 90 (393)
Q Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------------~~~~~~E~~~l~~l~~~~~~~~~ 90 (393)
|.+.++||+|+||.||+|.+. +|+.||||+++..... ......|...+..+
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l--------- 71 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL--------- 71 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT---------
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc---------
Confidence 467899999999999999885 6889999987532111 01123455566665
Q ss_pred cccCcccccceeccccceeecCCCeEEEEEEeeccccHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCeeeccC
Q psy12288 91 AYNTQASEKVIRLLNDFKIYSRNGTHICMVFEVMGYNLLRLIARSDYKGIHIQNVRTIIKQVLEGLNYLHTQCRIIHTDI 170 (393)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~~~i~H~dl 170 (393)
.+.+++..++... .+++||++++.... .++...+..++.|++.++++||++ |++||||
T Consensus 72 -----~~~~v~~~~~~~~--------~~lvme~~~~~~~~--------~l~~~~~~~i~~ql~~~l~~lH~~-giiHrDi 129 (191)
T d1zara2 72 -----QGLAVPKVYAWEG--------NAVLMELIDAKELY--------RVRVENPDEVLDMILEEVAKFYHR-GIVHGDL 129 (191)
T ss_dssp -----TTSSSCCEEEEET--------TEEEEECCCCEEGG--------GCCCSCHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred -----cCCCcceEEEecC--------CEEEEEeecccccc--------chhhHHHHHHHHHHHHHHHHHhhC-CEEEccC
Confidence 3444444433211 36899999654221 155566788999999999999998 9999999
Q ss_pred CCCceEEeechhHHhHhhhhhhcccccCCcCCCCCCCCCCCCCCCCCCcccccceEEEeecCccccccCCCCCCCCCCCC
Q psy12288 171 KPENILMCVDYDKVRRMARDATKHHKIGMKLPMSLDSTMSDFSLLDPANEVYDISVKIADLGNACWIDDHFADEIQTRQY 250 (393)
Q Consensus 171 kp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~t~~y 250 (393)
||+|||++.++ ++|+|||.+.....+.. ..|
T Consensus 130 KP~NILv~~~~--------------------------------------------~~liDFG~a~~~~~~~~-----~~~ 160 (191)
T d1zara2 130 SQYNVLVSEEG--------------------------------------------IWIIDFPQSVEVGEEGW-----REI 160 (191)
T ss_dssp STTSEEEETTE--------------------------------------------EEECCCTTCEETTSTTH-----HHH
T ss_pred ChhheeeeCCC--------------------------------------------EEEEECCCcccCCCCCc-----HHH
Confidence 99999998554 88999999865432211 111
Q ss_pred chh--H---HHhcCCCCchhhHHhHHHH
Q psy12288 251 RSV--E---VLIGAGYGPAADIWSTACM 273 (393)
Q Consensus 251 ~aP--E---~~~~~~~~~~~DiwSlG~~ 273 (393)
... + .+....|+.++|+||+.--
T Consensus 161 l~rd~~~~~~~f~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 161 LERDVRNIITYFSRTYRTEKDINSAIDR 188 (191)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence 111 1 1123457889999997543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.81 E-value=0.00014 Score=62.36 Aligned_cols=79 Identities=11% Similarity=0.047 Sum_probs=49.7
Q ss_pred eEEEEEEecccCceEEEEEEeCCCCceEEEEEEecc-cccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccc
Q psy12288 29 RYHVIRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD-QVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDF 107 (393)
Q Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 107 (393)
.|++.+..+-++.+.||+.. .++..+.+|+.... ......+.+|..+++.+.... -+++++...
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~v-------------pvP~vl~~~ 79 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKL-------------PVPKVLHFE 79 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTS-------------CCCCEEEEE
T ss_pred ceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccC-------------CCCcEEEEE
Confidence 56666665545567899884 34556778877543 334556788999999885321 123333333
Q ss_pred eeecCCCeEEEEEEeeccc
Q psy12288 108 KIYSRNGTHICMVFEVMGY 126 (393)
Q Consensus 108 ~~~~~~~~~~~iv~e~~~~ 126 (393)
. .++..++||++++|
T Consensus 80 ~----~~~~~~lv~~~l~G 94 (263)
T d1j7la_ 80 R----HDGWSNLLMSEADG 94 (263)
T ss_dssp E----ETTEEEEEEECCSS
T ss_pred e----cCCceEEEEEeccc
Confidence 2 44568899999944
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.51 E-value=0.00028 Score=64.37 Aligned_cols=51 Identities=22% Similarity=0.259 Sum_probs=34.7
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecc--------cccchhhHHHHHHHHHhcc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSD--------QVYADTARDEIVLLKAVGR 83 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~~ 83 (393)
.+.||.|....||++....+++.+++|.-... .....+...|..+|+.+..
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~ 89 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGE 89 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHT
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhh
Confidence 56799999999999988877888999964321 1223456679999988853
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.69 E-value=0.0061 Score=51.18 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=45.7
Q ss_pred EEecccCc-eEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccCCCCcccccCcccccceeccccceeecC
Q psy12288 34 RKLGWGHF-STVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKSNVHSSAYNTQASEKVIRLLNDFKIYSR 112 (393)
Q Consensus 34 ~~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 112 (393)
+.+..|.. +.||+... .++..+.+|..... ....+..|..+++.+..... . +++++....
T Consensus 16 ~~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~--~~~~l~~E~~~l~~L~~~gv---------p---vP~v~~~~~---- 76 (255)
T d1nd4a_ 16 AQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGV---------P---CAAVLDVVT---- 76 (255)
T ss_dssp EECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTC---------C---BCCEEEEEE----
T ss_pred EEcCCcccCCeEEEEEe-CCCCEEEEEeCCcc--CHhHHHHHHHHHHHHHhcCC---------C---CCceeeecc----
Confidence 34455553 67898854 35666888876543 34567889999998854321 1 333333322
Q ss_pred CCeEEEEEEeeccc
Q psy12288 113 NGTHICMVFEVMGY 126 (393)
Q Consensus 113 ~~~~~~iv~e~~~~ 126 (393)
.++..+++|+++.|
T Consensus 77 ~~~~~~~v~~~i~G 90 (255)
T d1nd4a_ 77 EAGRDWLLLGEVPG 90 (255)
T ss_dssp CSSCEEEEEECCSS
T ss_pred cccceEEEEEeeec
Confidence 44567899999943
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.57 E-value=0.009 Score=52.44 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=33.1
Q ss_pred eEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 42 STVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 42 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
..||++.. .+|+.+++|+........+.+..|...+..+....
T Consensus 36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~g 78 (325)
T d1zyla1 36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDE 78 (325)
T ss_dssp SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTT
T ss_pred ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 57999854 46788999998766555677888999999986543
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.55 E-value=0.023 Score=51.11 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=36.3
Q ss_pred EEEecccCceEEEEEEeCCC-------CceEEEEEEecccccchhhHHHHHHHHHhccc
Q psy12288 33 IRKLGWGHFSTVWLSWDLQD-------KTFVALKIVKSDQVYADTARDEIVLLKAVGRK 84 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 84 (393)
++.|+-|-...+|++..... .+.|.+++.-. ........+|..+++.++..
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~~idr~~E~~i~~~ls~~ 104 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PETESHLVAESVIFTLLSER 104 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCCHHHHHHHHHHHHHHHHT
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cchhhHHHHHHHHHHHHHhC
Confidence 46788899999999986542 35677777653 32334567899999998643
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.88 E-value=0.5 Score=40.28 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=31.0
Q ss_pred EEEecccCceEEEEEEeCCCCceEEEEEEecccccchhhHHHHHHHHHhcccC
Q psy12288 33 IRKLGWGHFSTVWLSWDLQDKTFVALKIVKSDQVYADTARDEIVLLKAVGRKS 85 (393)
Q Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 85 (393)
.+.|..|--...|+.... +| .+++|++... ...+.+..|+.++..+....
T Consensus 23 ~~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g 72 (316)
T d2ppqa1 23 YKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKG 72 (316)
T ss_dssp EEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTT
T ss_pred eecCCCCcccCeEEEEEC-CC-cEEEEEcCCC-CCHHHHHHHHHHHHhhhhcc
Confidence 456677777788988654 33 4789988643 24566777888888886653
|