Psyllid ID: psy12347

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
Protein Sequence
LTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTRT
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHcccccEEEEccccEEEEHHHHHHHHHHccccccccccEEEEEEcccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHccEEEEEEEEcccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHcccccEEEEccccEEEEHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHcccccccEEEcccccccEEEEEEEcccccHHHHHHHHHHHHHHHEEEEEcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHHcccccccccEEEEHEEEccccccccccccEEccHHHccccccccccccccEEEcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccccccccccccHHcccccccHHHHHHHHHHccccccccccccccccccccHHHcEEEcccccccEEccccccccEEEEEEEcccccHHHHHHHHHHHcHHEEEEEEEccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHcc
Coil and Loop (DISEMBL)
ltssdstwqsssdllppddstrlinltnfeflinppcldtVYLVLIHSAPYNYERRRLirntwgprvslyffigetdpsnqtrldiesetyhdivqgrfwdsyrnltYKHTMVFKWVVyncphvkyvfkldddVFMNVIQLDELLtrtlsphgtrnlLMCSIVWekspvlrtyrsKWRVSfseyrdhfypphchgnillySPDVVFKLYQHLqtdqeyfwvddVFITGIVFSKlnlthakfswwpghdepivslfnnwdlrkydphkTLFALlwepdfvrltssdstwqsssdllppddstrlinltnfeflinppcldtVYLVLIHsapynydkrrlirntwgtRVSVYFFIgetdpsnqtrldiesetyhdivqgrfwdsyrnltYKHTMVFKWVVyncphvkyvlklDDDVFMNVIQLDELLTRT
Flexible Loop (DISEMBL)
ltssdstwqsssdllppddSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFigetdpsnqtrLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLtrtlsphgtrnllmcsivwekspvlrTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLtssdstwqsssdllppdDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFigetdpsnqtrLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTRT
Low Complexity Region (SEG)
ltssdstwqsssdllppddsTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRltssdstwqsssdllppddsTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTRT
Disordered region (IsUnstruct)
*********************RLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLT******************TRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDEL****
Disordered Region (DISOPRED)
********************TRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR*
Disordered Region (DISEMBL)
**************LPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLTS**********LLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTRT
Disordered Region (DISPRO)
*********SSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTRT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYERRRLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	428	2.2.26 [Sep-21-2011]
Q99NB2	377	Lactosylceramide 1,3-N-ac	yes	N/A	0.485	0.551	0.324	3e-24
Q864U8	377	Lactosylceramide 1,3-N-ac	yes	N/A	0.492	0.559	0.343	4e-24
Q9MYM7	326	Beta-1,3-galactosyltransf	N/A	N/A	0.490	0.644	0.336	2e-23
Q7JK26	326	Beta-1,3-galactosyltransf	no	N/A	0.490	0.644	0.336	2e-23
Q7JK25	326	Beta-1,3-galactosyltransf	N/A	N/A	0.490	0.644	0.336	2e-23
O54904	326	Beta-1,3-galactosyltransf	yes	N/A	0.490	0.644	0.336	2e-23
Q9Y5Z6	326	Beta-1,3-galactosyltransf	yes	N/A	0.490	0.644	0.336	2e-23
Q7JK24	326	Beta-1,3-galactosyltransf	N/A	N/A	0.490	0.644	0.336	2e-23
Q9BYG0	378	Lactosylceramide 1,3-N-ac	no	N/A	0.509	0.576	0.309	2e-23
Q8BGY6	376	Lactosylceramide 1,3-N-ac	no	N/A	0.455	0.518	0.334	9e-23

>sp|Q99NB2|B3GN5_RAT Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Rattus norvegicus GN=B3gnt5 PE=2 SV=2

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 112/225 (49%), Gaps = 17/225 (7%)

Query: 39  DTVYLVLIHSAPYNYERRRLIRNTWG----------PRVSLYFFIGETDPSN----QTRL 84
           D + L+ I +AP NYERR  IR TWG            + + F +G   P      Q RL
Sbjct: 86  DVLLLLFIKTAPENYERRSAIRKTWGNENYVQSQLNANIKILFALGTPHPLKGKELQKRL 145

Query: 85  DIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL 144
             E + YHDI+Q  F DS+ NLT+K  + F W    CPH +++   DDD+F+++  L E 
Sbjct: 146 IWEDQVYHDIIQQDFTDSFHNLTFKFLLQFGWANTFCPHARFLMTADDDIFIHMPNLIEY 205

Query: 145 LTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDV 204
           L + L   G R+  +   V    P +R   SK+ V +  Y+   YP +  G   + S DV
Sbjct: 206 L-QGLEQVGVRDFWIGH-VHRGGPPVRDKSSKYYVPYEMYKWPAYPDYTAGAAYVVSNDV 263

Query: 205 VFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE 249
             K+Y+  QT     ++DDVF+ G+  +K+ +      ++ G  +
Sbjct: 264 AAKIYEASQTLNSSMYIDDVFM-GLCANKVGVVPQDHVFFSGEGK 307

Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 6

>sp|Q864U8|B3GN5_PIG Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Sus scrofa GN=B3GNT5 PE=2 SV=1

 Score =  112 bits (281), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 25/236 (10%)

Query: 29  FEFLIN----PPCLDTVYLVLIHSAPYNYERRRLIRNTWG----------PRVSLYFFIG 74
           +++LIN        D + L+ + +AP NY RR  IRNTWG            +   F +G
Sbjct: 71  YQYLINHEEKCQAQDVLLLLFVKTAPENYNRRSAIRNTWGNEKYVQSQLNANIKTLFVLG 130

Query: 75  E-TDP----SNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFK 129
             +DP      Q RL  E   Y DI+Q  F DS+ NLT K  + FKW    CPH K++  
Sbjct: 131 TPSDPLMRERLQRRLVWEDHMYSDIIQQDFVDSFYNLTLKFLLQFKWANSFCPHAKFLMT 190

Query: 130 LDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFY 189
            DDD+F+++  L E L ++L   G ++  +   V   +P +R   SK+ VS+  Y+   Y
Sbjct: 191 ADDDIFIHMPNLIEYL-QSLEQMGVQDFWI-GRVHHGAPPVRDKSSKYYVSYDMYQWPAY 248

Query: 190 PPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL---THAKFS 242
           P +  G   + S DV  K+Y+  QT     ++DDVF+ G+  +K+ L   +HA FS
Sbjct: 249 PDYTAGAAYVISGDVATKVYEASQTLNSSLYIDDVFM-GLCANKIGLVPQSHAFFS 303

Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|Q9MYM7|B3GT1_PONPY Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 21  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYERRRLIRNTWGP-------RVSL 69
           TR IN  +FEFLIN P  C   +   ++LI +    ++ R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 70  YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 188 FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL 236
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGI 277

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK26|B3GT1_PANTR Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 21  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYERRRLIRNTWGP-------RVSL 69
           TR IN  +FEFLIN P  C   +   ++LI +    ++ R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 70  YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 188 FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL 236
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGI 277

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK25|B3GT1_PANPA Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 21  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYERRRLIRNTWGP-------RVSL 69
           TR IN  +FEFLIN P  C   +   ++LI +    ++ R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 70  YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 188 FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL 236
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGI 277

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan paniscus (taxid: 9597)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|O54904|B3GT1_MOUSE Beta-1,3-galactosyltransferase 1 OS=Mus musculus GN=B3galt1 PE=2 SV=2

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 21  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYERRRLIRNTWGP-------RVSL 69
           TR IN  +FEFLIN P  C   +   ++LI +    ++ R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 70  YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 188 FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL 236
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGI 277

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9Y5Z6|B3GT1_HUMAN Beta-1,3-galactosyltransferase 1 OS=Homo sapiens GN=B3GALT1 PE=2 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 21  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYERRRLIRNTWGP-------RVSL 69
           TR IN  +FEFLIN P  C   +   ++LI +    ++ R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 70  YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 188 FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL 236
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGI 277

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK24|B3GT1_GORGO Beta-1,3-galactosyltransferase 1 OS=Gorilla gorilla gorilla GN=B3GALT1 PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 21  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYERRRLIRNTWGP-------RVSL 69
           TR IN  +FEFLIN P  C   +   ++LI +    ++ R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 70  YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 188 FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL 236
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGI 277

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Gorilla gorilla gorilla (taxid: 9595)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9BYG0|B3GN5_HUMAN Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Homo sapiens GN=B3GNT5 PE=1 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 120/239 (50%), Gaps = 21/239 (8%)

Query: 29  FEFLIN----PPCLDTVYLVLIHSAPYNYERRRLIRNTWG----------PRVSLYFFIG 74
           +++LIN        D + L+ + +AP NY+RR  IR TWG            +   F +G
Sbjct: 73  YQYLINHKEKCQAQDVLLLLFVKTAPENYDRRSGIRRTWGNENYVRSQLNANIKTLFALG 132

Query: 75  ETDPSN----QTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKL 130
             +P      Q +L  E + Y+DI+Q  F DS+ NLT K  M F W    CPH K++   
Sbjct: 133 TPNPLEGEELQRKLAWEDQRYNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTA 192

Query: 131 DDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYP 190
           DDD+F+++  L E L ++L   G ++  +   V   +P +R   SK+ VS+  Y+   YP
Sbjct: 193 DDDIFIHMPNLIEYL-QSLEQIGVQDFWI-GRVHRGAPPIRDKSSKYYVSYEMYQWPAYP 250

Query: 191 PHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE 249
            +  G   + S DV  K+Y+  QT     ++DDVF+ G+  +K+ +      ++ G  +
Sbjct: 251 DYTAGAAYVISGDVAAKVYEASQTLNSSLYIDDVFM-GLCANKIGIVPQDHVFFSGEGK 308

Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Probably plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|Q8BGY6|B3GN5_MOUSE Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Mus musculus GN=B3gnt5 PE=2 SV=1

 Score =  108 bits (269), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 39  DTVYLVLIHSAPYNYERRRLIRNTWG----------PRVSLYFFIGETDPSN----QTRL 84
           D + L+ I +AP NY RR  IR TWG            + + F +G   P      Q RL
Sbjct: 85  DVLLLLFIKTAPENYGRRSAIRKTWGNENYVQSQLNANIKILFALGTPGPLKGKELQKRL 144

Query: 85  DIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL 144
             E + Y DI+Q  F DS+ NLT K  + F W    CPH K++   DDD+F+++  L E 
Sbjct: 145 IGEDQVYKDIIQQDFIDSFHNLTSKFLLQFSWANTFCPHAKFLMTADDDIFIHMPNLIEY 204

Query: 145 LTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDV 204
           L + L   G R+  +   V    P +R   SK+ V +  Y+   YP +  G   + S DV
Sbjct: 205 L-QGLEQIGVRDFWIGH-VHRGGPPVRDKSSKYYVPYEMYKWPAYPDYTAGAAYVVSRDV 262

Query: 205 VFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL 236
             K+Y+  QT     ++DDVF+ G+  +K+ +
Sbjct: 263 AAKIYEASQTLNSSMYIDDVFM-GLCANKVGI 293

Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	428
307174938	357	UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc	0.572	0.686	0.460	6e-56
332025130	357	UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc	0.593	0.711	0.452	7e-56
307211407	358	UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc	0.572	0.684	0.456	1e-54
340711970	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.565	0.679	0.450	5e-53
350402524	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.565	0.679	0.446	9e-53
328779723	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.560	0.674	0.453	3e-52
380030215	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.560	0.674	0.453	3e-52
383859071	357	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.572	0.686	0.440	1e-51
328712545	350	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.628	0.768	0.422	5e-51
91079969	344	PREDICTED: similar to AGAP006142-PA [Tri	0.551	0.686	0.432	4e-50

>gi|307174938|gb|EFN65178.1| UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Camponotus floridanus]

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 117/254 (46%), Positives = 163/254 (64%), Gaps = 9/254 (3%)

Query: 15  LPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYERRRLIRNTWG---PRVS 68
           LP DD T LIN+T+F F++N  PC  T  + L+L+HSAP N+ +R ++R TWG   P V+
Sbjct: 74  LPSDDKTTLINITDFRFIMNHNPCNRTQPLLLMLVHSAPGNFPKRHVVRETWGQQAPDVT 133

Query: 69  LYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
           L F +G ++   Q+RL+ E++ Y D++QG F D+YRN+TYKH M  KW  Y CP  KY+ 
Sbjct: 134 LLFLVGYSE-EYQSRLEEENKKYQDLIQGNFLDAYRNMTYKHVMGLKWATYYCPSAKYIL 192

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHF 188
           KLDDDVF+++  + + LTR LSP G R L++C ++   S V R++RSKWRVS  EY    
Sbjct: 193 KLDDDVFVHLPAMLDFLTRGLSPWGARRLILCDLL-SASTVKRSWRSKWRVSPQEYPGRL 251

Query: 189 YPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHD 248
           YP +C G  +LYSPD VF LY+  Q  + YFW+DDV +TG +  K+NLT      W    
Sbjct: 252 YPTYCAGWAILYSPDSVFILYREAQ-KEPYFWIDDVHVTGTLARKVNLTQTSLHSWVLTT 310

Query: 249 EPIVSLFNNWDLRK 262
           E +  L +N   R+
Sbjct: 311 ESMRDLLSNPSARR 324

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025130|gb|EGI65310.1| UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Acromyrmex echinatior]

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/263 (45%), Positives = 167/263 (63%), Gaps = 9/263 (3%)

Query: 6   STWQSSSDLLPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYERRRLIRNT 62
           ST   S + LP DD + LIN+T+F F++N  PC  T  + L+L+HSAP N+ +R ++R T
Sbjct: 65  STQSYSINELPSDDKSTLINITDFRFIMNHNPCNRTQPLLLMLVHSAPGNFPKRHVVRET 124

Query: 63  WG---PRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVY 119
           WG   P V+L F +G ++   Q++L+ E+E Y D++QG F D+YRN+TYKH M  KW  Y
Sbjct: 125 WGQQAPDVTLLFLVGYSE-KYQSKLEKENEKYQDLIQGNFLDAYRNMTYKHVMGLKWATY 183

Query: 120 NCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRV 179
            CP  KY+ KLDDDVF+++  + + LT  LSP G R L++C ++   S V R++RSKWRV
Sbjct: 184 YCPSAKYILKLDDDVFVHLPAMLDFLTHGLSPWGARRLILCDLL-SASAVKRSWRSKWRV 242

Query: 180 SFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHA 239
           S  EY    YP +C G  +LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT  
Sbjct: 243 SPREYPGRLYPAYCAGWAILYSPDSVFILYREAQ-KEPYFWIDDVHITGTLARKVNLTQT 301

Query: 240 KFSWWPGHDEPIVSLFNNWDLRK 262
               W    E +  L +N + R+
Sbjct: 302 SLHSWVLTTESMRDLLSNPNTRR 324

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211407|gb|EFN87534.1| UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Harpegnathos saltator]

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/254 (45%), Positives = 159/254 (62%), Gaps = 9/254 (3%)

Query: 15  LPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYERRRLIRNTWG---PRVS 68
           LP DD + LIN+ +F F IN  PC  T  + L+L+HSAP N+ +R ++R TWG   P V+
Sbjct: 75  LPSDDKSTLINIKDFRFTINHSPCNRTQPLLLMLVHSAPENFLKRHVVRETWGQQTPDVT 134

Query: 69  LYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
           L F IG ++   Q++L+ E++ Y D++QG F D+YRN+TYKH M  KW  Y CP  KY+ 
Sbjct: 135 LLFLIGYSE-KYQSKLEEENKKYQDLIQGNFLDAYRNMTYKHVMGLKWATYYCPSAKYIL 193

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHF 188
           KLDDDVF+++  + + LT  LSP G R L++C ++   S V R++RSKWRVS  EY    
Sbjct: 194 KLDDDVFVHLPAMLDFLTHGLSPWGARRLILCDLL-SASAVKRSWRSKWRVSPQEYPGRL 252

Query: 189 YPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHD 248
           YP +C G  +LYSPD VF LY+  Q  + YFW+DDV ITG +  K NLT      W    
Sbjct: 253 YPAYCAGWAILYSPDSVFILYREAQ-KEPYFWIDDVHITGTLARKANLTQTSLHSWVLTS 311

Query: 249 EPIVSLFNNWDLRK 262
           E +  L +N   R+
Sbjct: 312 ESMRDLLSNPGARR 325

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711970|ref|XP_003394538.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Bombus terrestris]

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 113/251 (45%), Positives = 159/251 (63%), Gaps = 9/251 (3%)

Query: 18  DDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYERRRLIRNTWG---PRVSLYF 71
            D + LI++ +F F IN  PC  T  + L+L+HSAP N+ +R ++R TWG   P V+L F
Sbjct: 76  GDKSTLIDIKDFRFTINNDPCNRTHPLLLMLVHSAPENFVKRNVVRETWGQQSPEVALLF 135

Query: 72  FIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLD 131
           F+G +D   QT L+ E+  + D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ KLD
Sbjct: 136 FVGSSD-EYQTMLEEENRKFKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYILKLD 194

Query: 132 DDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPP 191
           DDVF++V  + + LTR LSP G R L++C ++     V R++RSKWRVS  EY    YP 
Sbjct: 195 DDVFVHVPAMLDFLTRDLSPWGARRLILCDLL-PTGTVKRSWRSKWRVSPQEYPGRHYPA 253

Query: 192 HCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPI 251
           +C G  +LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT     +    +E +
Sbjct: 254 YCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSLHYLVLTNENM 312

Query: 252 VSLFNNWDLRK 262
             L +N + R+
Sbjct: 313 QDLLSNPNSRR 323

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350402524|ref|XP_003486516.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Bombus impatiens]

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 112/251 (44%), Positives = 159/251 (63%), Gaps = 9/251 (3%)

Query: 18  DDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYERRRLIRNTWG---PRVSLYF 71
            D + LI++ +F F IN  PC  T  + L+L+HSAP N+ +R ++R TWG   P V+L F
Sbjct: 76  GDKSTLIDIKDFRFTINNDPCNRTHPLLLMLVHSAPENFVKRNVVRETWGQQSPEVALLF 135

Query: 72  FIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLD 131
           F+G +D   QT L+ E+  + D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ KLD
Sbjct: 136 FVGSSD-EYQTMLEEENRKFKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYILKLD 194

Query: 132 DDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPP 191
           DDVF+++  + + LTR LSP G R L++C ++     V R++RSKWRVS  EY    YP 
Sbjct: 195 DDVFVHIPAMLDFLTRDLSPWGARRLILCDLL-PTGTVKRSWRSKWRVSPREYPGRHYPA 253

Query: 192 HCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPI 251
           +C G  +LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT     +    +E +
Sbjct: 254 YCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSLHYLVLTNENM 312

Query: 252 VSLFNNWDLRK 262
             L +N + R+
Sbjct: 313 QDLLSNPNSRR 323

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779723|ref|XP_001120247.2| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Apis mellifera]

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/249 (45%), Positives = 157/249 (63%), Gaps = 9/249 (3%)

Query: 15  LPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYERRRLIRNTWGPR---VS 68
           LP  D + LI++ +F F IN  PC  T  + L+L+HSAP N+ +R ++R TWG +   V+
Sbjct: 73  LPFGDKSTLIDIKDFRFTINNDPCNGTHLLLLMLVHSAPENFVKRNVVRETWGQQSSNVA 132

Query: 69  LYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
           L FF+G +D   QT L+ E+  Y D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ 
Sbjct: 133 LLFFVGSSD-EYQTMLEEENRKYKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYIL 191

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHF 188
           KLDDDVF+++  + + LTR LSP G R L++C +      V R++RSKWRVS  EY    
Sbjct: 192 KLDDDVFVHIPAMLDFLTRDLSPWGARRLILCDL-HPTGTVKRSWRSKWRVSPQEYPGRH 250

Query: 189 YPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHD 248
           YP +C G  +LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT     +    +
Sbjct: 251 YPAYCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSLHYLMLTN 309

Query: 249 EPIVSLFNN 257
           E +  L +N
Sbjct: 310 ENMQDLLSN 318

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030215|ref|XP_003698749.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Apis florea]

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/249 (45%), Positives = 157/249 (63%), Gaps = 9/249 (3%)

Query: 15  LPPDDSTRLINLTNFEFLINP-PCLDT--VYLVLIHSAPYNYERRRLIRNTWGPR---VS 68
           LP  D + LI++ +F F IN  PC  T  + L+L+HSAP N+ +R ++R TWG +   V+
Sbjct: 73  LPFGDKSTLIDIKDFRFTINNNPCNGTHLLLLMLVHSAPENFVKRNVVRETWGQQSSNVA 132

Query: 69  LYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
           L FF+G +D   QT L+ E+  Y D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ 
Sbjct: 133 LLFFVGSSD-EYQTMLEEENRKYKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYIL 191

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHF 188
           KLDDDVF+++  + + LTR LSP G R L++C +      V R++RSKWRVS  EY    
Sbjct: 192 KLDDDVFVHIPAMLDFLTRDLSPWGARRLILCDL-HPTGTVKRSWRSKWRVSPQEYPGRH 250

Query: 189 YPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHD 248
           YP +C G  +LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT     +    +
Sbjct: 251 YPAYCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSLHYLMLTN 309

Query: 249 EPIVSLFNN 257
           E +  L +N
Sbjct: 310 ENMQDLLSN 318

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859071|ref|XP_003705021.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Megachile rotundata]

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/254 (44%), Positives = 160/254 (62%), Gaps = 9/254 (3%)

Query: 15  LPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYERRRLIRNTWG---PRVS 68
           LP  D + LI++ +F+F IN  PC  T  + L+L+HSAP N+ +R ++R TWG   P V+
Sbjct: 74  LPFGDRSTLIDIKDFKFTINHDPCNRTHPLLLMLVHSAPENFVKRNVVRETWGQQSPDVT 133

Query: 69  LYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
           L F +G +D   QT+L+ E+  + D++QG F D+YRN+TYKH M  KW  Y+CP  KYV 
Sbjct: 134 LLFLVGWSD-EYQTKLEEENRRFKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYVL 192

Query: 129 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHF 188
           KLDDDVF+++  + + LT  LSP G R L++C ++     V R++RSKWRVS  EY    
Sbjct: 193 KLDDDVFVHIPAMMDFLTHGLSPWGARRLILCDLL-SAGTVKRSWRSKWRVSPQEYPGRH 251

Query: 189 YPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHD 248
           YP +C G  +LYSPD VF LY+  Q  + YFW+DDV ITG +  K+N+T     +    +
Sbjct: 252 YPAYCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNITQTSLHYLVLTN 310

Query: 249 EPIVSLFNNWDLRK 262
           E +  L +N   R+
Sbjct: 311 ENMQDLLSNPSSRR 324

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328712545|ref|XP_003244837.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Acyrthosiphon pisum]

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/291 (42%), Positives = 168/291 (57%), Gaps = 22/291 (7%)

Query: 15  LPPDDSTRLINLTNFEFLINPPCLDT---VYLVLIHSAPYNYERRRLIRNTWGPRVSLYF 71
           L   D   LI+L +F F IN    +    + + L+H+AP +Y +R+ IR+TW   +   F
Sbjct: 60  LADTDLHSLIDLPSFNFNINQKVCNNNTKLIMALVHTAPGHYAKRQAIRDTWAKMIPTLF 119

Query: 72  FIGETDPSNQTRLDI--ESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFK 129
           F+G  D SN T+ D+  E++ Y DIVQG F D YRNLTYKH MV KW +Y CP  +Y+ K
Sbjct: 120 FMGLPD-SNITQSDVVLENKIYSDIVQGDFIDCYRNLTYKHVMVLKWTLYYCPCARYLLK 178

Query: 130 LDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFY 189
            DDD  +N   L E+L   LSP G RNLLMC +++  S V R+YRSKWRVS+SEY + +Y
Sbjct: 179 TDDDTLVNAPYLLEILNHRLSPLGARNLLMCQLMFS-SMVKRSYRSKWRVSYSEYPNRWY 237

Query: 190 PPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE 249
           P +C G  ++YSPDV++KLY   Q    YFW+DDV ITG +  K N+T          + 
Sbjct: 238 PIYCRGWAIMYSPDVIYKLYTEAQV-SPYFWIDDVHITGTIADKQNITQTDLGTLAVDES 296

Query: 250 PIVSLFNNWDLRKYDPHKTLFALLWEPDFVRLTSSDSTWQSSSDLLPPDDS 300
            +V         K    K LF LL + D     S  + W++   LL P+D+
Sbjct: 297 DVVG-------DKNISRKFLFCLLTKAD----ESMRTFWKT---LLQPNDT 333

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079969|ref|XP_969838.1| PREDICTED: similar to AGAP006142-PA [Tribolium castaneum] gi|270004605|gb|EFA01053.1| hypothetical protein TcasGA2_TC003969 [Tribolium castaneum]

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/245 (43%), Positives = 157/245 (64%), Gaps = 9/245 (3%)

Query: 2   TSSDSTWQSSSDLLPPDDSTRLINLTNFEF-LINPPCLDT--VYLVLIHSAPYNYERRRL 58
           TS+ S++      L  DD  +LINL NF F ++N PC  +  + LVL+HS P ++  R++
Sbjct: 44  TSNTSSYSYPVQNLSQDDYHQLINLKNFTFTILNKPCNGSSPILLVLVHSNPKHFATRKV 103

Query: 59  IRNTWGP---RVSLYFFIGETDPSN-QTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVF 114
           +R TWG    +V + F +G       + +++ E+E + D++QG F D+YRN+TYKH MVF
Sbjct: 104 LRTTWGKNSLQVKVLFMLGLVKSHRLKVQIEKENEEFGDLIQGSFLDTYRNMTYKHVMVF 163

Query: 115 KWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYR 174
           K+ +Y+CP  KY+ K DDD+F+N+  +   LT  L P G   ++ C++  E SPV+R   
Sbjct: 164 KYAIYHCPQAKYILKTDDDIFVNMPLMLNFLTEDLLPFGGSRMIFCTL-EENSPVVRKTG 222

Query: 175 SKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKL 234
           SKWRVSF+EY    YP +C G ++LYSP+VVF LY+  Q   +YFW+DDV ITGI+  K+
Sbjct: 223 SKWRVSFTEYPAEKYPTYCLGWVILYSPNVVFDLYKEAQ-KTDYFWIDDVHITGILVEKI 281

Query: 235 NLTHA 239
           +LT  
Sbjct: 282 HLTRV 286

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	428
FB|FBgn0035558	434	CG11357 [Drosophila melanogast	0.481	0.474	0.433	1.5e-42
UNIPROTKB|E1C4T5	326	B3GALT1 "Uncharacterized prote	0.507	0.665	0.340	2.8e-27
UNIPROTKB|F1PGN6	326	B3GALT1 "Uncharacterized prote	0.507	0.665	0.340	3.5e-27
UNIPROTKB|F1N0D5	326	B3GALT1 "Uncharacterized prote	0.507	0.665	0.340	4.5e-27
UNIPROTKB|Q9Y5Z6	326	B3GALT1 "Beta-1,3-galactosyltr	0.507	0.665	0.340	4.5e-27
UNIPROTKB|F1S1X0	326	B3GALT1 "Uncharacterized prote	0.507	0.665	0.340	4.5e-27
MGI|MGI:1349403	326	B3galt1 "UDP-Gal:betaGlcNAc be	0.507	0.665	0.340	4.5e-27
RGD|1311898	326	B3galt1 "UDP-Gal:betaGlcNAc be	0.507	0.665	0.340	4.5e-27
ZFIN|ZDB-GENE-120215-203	328	si:dkey-276l13.6 "si:dkey-276l	0.488	0.637	0.352	1.5e-26
RGD|70955	377	B3gnt5 "UDP-GlcNAc:betaGal bet	0.469	0.533	0.339	8.4e-26

FB|FBgn0035558 CG11357 [Drosophila melanogaster (taxid:7227)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 97/224 (43%), Positives = 135/224 (60%)

Query:    23 LINLTNFEFLINPP-C-LDTVYLVLIHSAPYNYERRRLIRNTWGPR-------VSLYFFI 73
             L++L NF +LI+ P C  D   L+L+HSA  N E+RR+IR TW  R       + +YF +
Sbjct:   115 LMDLPNFVYLIDQPACDKDVRALILVHSAVRNIEKRRIIRETWANRSYIDQTPLKVYFLV 174

Query:    74 GETDPSN---QTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKL 130
             G     +   Q  L  E+  + D++QG F D+YRN+TYKH M  KW    C H + + K+
Sbjct:   175 GGVSAKSEKWQQFLGRENHLHGDLIQGNFKDAYRNMTYKHVMALKWFNEKCAHAQLLVKV 234

Query:   131 DDDVFMNVIQLDELLTRTLSPHGTR----NLLMCSIVWEKSPVLRTYRSKWRVSFSEYRD 186
             DDDVFMN  QL + L     P  +     NL++C  V   S V R+YRSKWRV++ EY +
Sbjct:   235 DDDVFMNTPQLVKYLATPSLPEYSMLRDPNLMLCRSV-HHSRVKRSYRSKWRVTYKEYPN 293

Query:   187 HFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIV 230
              FYP +C G  ++Y+P+VV +LY+  Q  + YFWVDDV ITGI+
Sbjct:   294 RFYPEYCPGMAIVYAPEVVRRLYEAAQKSK-YFWVDDVLITGIL 336

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 82/241 (34%), Positives = 124/241 (51%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGP-------RVSL 69
             TR IN  +F+FLIN P  C  +V +LV++ S  +  ++ R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFDFLINEPNKCEKSVPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:    70 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATYCSKAKYVM 174

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+ + L P+   R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPNTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 243
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   244 W 244
             W
Sbjct:   288 W 288

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

UNIPROTKB|F1PGN6 B3GALT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 82/241 (34%), Positives = 123/241 (51%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGP-------RVSL 69
             TR IN  +FEFLIN P  C  ++ +LV++ S  +  ++ R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKSIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:    70 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 243
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   244 W 244
             W
Sbjct:   288 W 288

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|F1N0D5 B3GALT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 82/241 (34%), Positives = 122/241 (50%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGP-------RVSL 69
             TR IN  +FEFLIN P  C   + +LV++ S  +  ++ R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPTKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:    70 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCAKAKYVM 174

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 243
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   244 W 244
             W
Sbjct:   288 W 288

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|Q9Y5Z6 B3GALT1 "Beta-1,3-galactosyltransferase 1" [Homo sapiens (taxid:9606)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 82/241 (34%), Positives = 122/241 (50%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGP-------RVSL 69
             TR IN  +FEFLIN P  C   + +LV++ S  +  ++ R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:    70 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 243
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   244 W 244
             W
Sbjct:   288 W 288

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IDA

GO:0016021 "integral to membrane" evidence=NAS

GO:0006486 "protein glycosylation" evidence=IEA;IDA

GO:0030259 "lipid glycosylation" evidence=NAS

UNIPROTKB|F1S1X0 B3GALT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 82/241 (34%), Positives = 122/241 (50%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGP-------RVSL 69
             TR IN  +FEFLIN P  C   + +LV++ S  +  ++ R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:    70 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 243
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   244 W 244
             W
Sbjct:   288 W 288

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

MGI|MGI:1349403 B3galt1 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1" [Mus musculus (taxid:10090)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 82/241 (34%), Positives = 122/241 (50%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGP-------RVSL 69
             TR IN  +FEFLIN P  C   + +LV++ S  +  ++ R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:    70 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 243
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   244 W 244
             W
Sbjct:   288 W 288

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006486 "protein glycosylation" evidence=ISO

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=ISO;IDA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

RGD|1311898 B3galt1 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1" [Rattus norvegicus (taxid:10116)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 82/241 (34%), Positives = 122/241 (50%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGP-------RVSL 69
             TR IN  +FEFLIN P  C   + +LV++ S  +  ++ R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:    70 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 243
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   244 W 244
             W
Sbjct:   288 W 288

GO:0000139 "Golgi membrane" evidence=IEA;ISO

GO:0006486 "protein glycosylation" evidence=IEA;ISO

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA;ISO

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-120215-203 si:dkey-276l13.6 "si:dkey-276l13.6" [Danio rerio (taxid:7955)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 81/230 (35%), Positives = 116/230 (50%)

Query:    21 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YERRRLIRNTWGPR-------VSL 69
             TR +N  NF+FLIN P  C  T  +LVL+ S  +  ++ R+ IR TWG         +  
Sbjct:    57 TRTLNPHNFKFLINEPKKCESTTPFLVLLISTNHKEFDARQAIRETWGDENTFSNVHILT 116

Query:    70 YFFIG-ETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 128
              F +G  T+P     ++ ES+ +HDI+   F DSY NLT K  M  +WV   CP+ +YV 
Sbjct:   117 LFLLGYSTEPVLNQMVEQESQIFHDILVEDFVDSYHNLTLKTLMGMRWVSLFCPNAQYVM 176

Query:   129 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH 187
             K D D+F+N   +D L+   L P+   R       V    P+ R   SKW +    Y D 
Sbjct:   177 KTDSDIFVN---MDNLVFNLLRPNAKPRRRFFTGHVINGGPI-RDVHSKWFMPRELYPDS 232

Query:   188 FYPPHCHGNILLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL 236
              YPP C G   +YS D+   LY+  L T      ++DV++ G+   KL +
Sbjct:   233 RYPPFCSGTGYVYSGDMAELLYKTSLHT--RLLHLEDVYV-GLCLRKLGI 279

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

RGD|70955 B3gnt5 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5" [Rattus norvegicus (taxid:10116)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 75/221 (33%), Positives = 111/221 (50%)

Query:    39 DTVYLVLIHSAPYNYERRRLIRNTWG----------PRVSLYFFIGETDPSN----QTRL 84
             D + L+ I +AP NYERR  IR TWG            + + F +G   P      Q RL
Sbjct:    86 DVLLLLFIKTAPENYERRSAIRKTWGNENYVQSQLNANIKILFALGTPHPLKGKELQKRL 145

Query:    85 DIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL 144
               E + YHDI+Q  F DS+ NLT+K  + F W    CPH +++   DDD+F+++  L E 
Sbjct:   146 IWEDQVYHDIIQQDFTDSFHNLTFKFLLQFGWANTFCPHARFLMTADDDIFIHMPNLIEY 205

Query:   145 LTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDV 204
             L + L   G R+  +   V    P +R   SK+ V +  Y+   YP +  G   + S DV
Sbjct:   206 L-QGLEQVGVRDFWI-GHVHRGGPPVRDKSSKYYVPYEMYKWPAYPDYTAGAAYVVSNDV 263

Query:   205 VFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLT---HAKFS 242
               K+Y+  QT     ++DDVF+ G+  +K+ +    H  FS
Sbjct:   264 AAKIYEASQTLNSSMYIDDVFM-GLCANKVGVVPQDHVFFS 303

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005622 "intracellular" evidence=ISO

GO:0006486 "protein glycosylation" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA;ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0008457 "beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity" evidence=IEA;ISO

GO:0008917 "lipopolysaccharide N-acetylglucosaminyltransferase activity" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0047256 "lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	428
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	6e-35
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	3e-19
PLN03133	636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	3e-12
PLN03133	636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	1e-04

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  127 bits (322), Expect = 6e-35
 Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 19/198 (9%)

Query: 54  ERRRLIRNTWGP-------RVSLYFFIGETDPSNQTRLDI---ESETYHDIVQGRFWDSY 103
            RR  IR TW         R+   F +G +  ++    D+   E++ Y DIV   F D+Y
Sbjct: 1   ARRNAIRKTWMNKGNSEGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVDFEDTY 60

Query: 104 RNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIV 163
            NLT+K      + V   P  KY+ K+DDDV+    +L  LL R               V
Sbjct: 61  ENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNINP--SESSFYGYV 118

Query: 164 WEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLY---QHLQTDQEYFW 220
            ++ PV+R  +SKW V  S+Y    YPP+  G   L S D    L    +H +    +  
Sbjct: 119 MKEGPVIRNKKSKWYVPPSDYPCSRYPPYASGPFYLLSRDAAELLLKASKHRR----FLQ 174

Query: 221 VDDVFITGIVFSKLNLTH 238
           ++DV++TGI+   L ++ 
Sbjct: 175 IEDVYVTGILADDLGISR 192

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score = 85.1 bits (211), Expect = 3e-19
 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 10/104 (9%)

Query: 334 DKRRLIRNTWG-------TRVSVYFFIGETDPSNQTRLDI---ESETYHDIVQGRFWDSY 383
            +R  IR TW         R+   F +G +  ++    D+   E++ Y DIV   F D+Y
Sbjct: 1   ARRNAIRKTWMNKGNSEGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVDFEDTY 60

Query: 384 RNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR 427
            NLT+K      + V   P  KY+ K+DDDV+    +L  LL R
Sbjct: 61  ENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDR 104

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional

 Score = 68.3 bits (167), Expect = 3e-12
 Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 22/214 (10%)

Query: 11  SSDLLPPDDSTRLINLTNFEFLINPPC--LDTVYLVL-IHSAPYNYERRRLIRNTW---- 63
           +S L   +DS  +I+L   E L +PP      + L + + S   N++RR  +R TW    
Sbjct: 356 ASGLPTSEDSEHVIDL---EALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYD 412

Query: 64  ---GPRVSLYFFIG-ETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVY 119
                 V++ FF+G   +      L  E+ TY DI    F D Y  +T+K T+       
Sbjct: 413 AVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWK-TLAICIFGT 471

Query: 120 NCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRV 179
                KYV K DDD F+ V ++   L RT   HG   LL   I  +  P      SKW +
Sbjct: 472 EVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHG---LLYGLINSDSQPHRNPD-SKWYI 527

Query: 180 SFSEYRDHFYPPHCHGNILLYSPDV---VFKLYQ 210
           S  E+ +  YPP  HG   + S D+   V+K ++
Sbjct: 528 SPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRHK 561

Length = 636

>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 18/146 (12%)

Query: 291 SSDLLPPDDSTRLINLTNFEFLINPPC--LDTVYLVL-IHSAPYNYDKRRLIRNTW---- 343
           +S L   +DS  +I+L   E L +PP      + L + + S   N+ +R  +R TW    
Sbjct: 356 ASGLPTSEDSEHVIDL---EALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYD 412

Query: 344 ---GTRVSVYFFIG-ETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVY 399
                 V+V FF+G   +      L  E+ TY DI    F D Y  +T+K T+       
Sbjct: 413 AVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWK-TLAICIFGT 471

Query: 400 NCPHVKYVLKLDDDVFMNVIQLDELL 425
                KYV+K DDD F+ V   DE+L
Sbjct: 472 EVVSAKYVMKTDDDAFVRV---DEVL 494

Length = 636

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	428
KOG2287|consensus	349		100.0
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288|consensus	274		100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	99.97
KOG2287|consensus	349		99.96
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	99.95
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	99.95
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	99.93
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	99.85
KOG2288|consensus	274		99.82
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.8
KOG2246|consensus	364		99.63
PLN03153	537	hypothetical protein; Provisional	99.2
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	98.85
KOG2246|consensus	364		98.71
PLN03153	537	hypothetical protein; Provisional	97.35
KOG3708|consensus	681		96.97
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	96.62
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	95.66
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	95.48
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	94.95
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	94.93
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	94.76
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	94.48
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	94.23
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	93.8
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	93.23
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	92.82
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	92.54
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	92.28
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	91.84
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	91.77
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	91.68
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	91.15
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	91.01
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	90.22
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	90.01
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	89.47
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	88.61
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	88.28
PRK11204	420	N-glycosyltransferase; Provisional	88.24
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	87.92
COG1216	305	Predicted glycosyltransferases [General function p	87.76
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	87.6
PRK10714	325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	84.3
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	82.06
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	81.35
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	80.78

>KOG2287|consensus

Probab=100.00  E-value=8.1e-50  Score=397.90  Aligned_cols=218  Identities=33%  Similarity=0.565  Sum_probs=194.9

Q ss_pred             CCCCCccccc-cC-CCCCC---cEEEEEEcCCCCHHHHHHHHHHhcc-------cceEEEEecCCC-h-hHHHHHHHHHh
Q psy12347         24 INLTNFEFLI-NP-PCLDT---VYLVLIHSAPYNYERRRLIRNTWGP-------RVSLYFFIGETD-P-SNQTRLDIESE   89 (428)
Q Consensus        24 ~~~~~~~~~~-~~-~C~~~---~lli~V~S~~~~~~~R~~IR~TW~~-------~~~~~F~vG~~~-~-~~~~~l~~E~~   89 (428)
                      .+...+.+++ .+ .|...   +++++|+|+++|+++|++||+|||+       .++++|++|.+. + +++..|.+|++
T Consensus        74 ~~~~~~~~~l~~p~~~~~~~~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~  153 (349)
T KOG2287|consen   74 ADFQKFFYLLYLPEICDPDRPPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEAR  153 (349)
T ss_pred             hhhccChhhhcCChhhcCCCCceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHH
Confidence            4555555555 33 44443   8999999999999999999999999       699999999993 2 55899999999


Q ss_pred             hCCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcc
Q psy12347         90 TYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPV  169 (428)
Q Consensus        90 ~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~  169 (428)
                      .||||||+||.|+|.|||+|+++++.|+..+||+++|++|+|||+|||+++|+++|.+...  ..+..++|.+ ..+.+|
T Consensus       154 ~ygDIi~~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~--~~~~~~~G~v-~~~~~p  230 (349)
T KOG2287|consen  154 LYGDIIQVDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLND--PSSDLYYGRV-IQNAPP  230 (349)
T ss_pred             HhCCEEEEecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCC--CCcceEEEee-cccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999842  4678888888 777999


Q ss_pred             cccCCCCcccCccccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecCCCC
Q psy12347        170 LRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWP  245 (428)
Q Consensus       170 ~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~~~~  245 (428)
                      +|+..+|||||+++||+..||+||+|+|||+|+++|++|++++.+ .+++++|||++||.+++.+||.+.+.+.+.
T Consensus       231 ~R~~~~KwyVp~~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~-~~~~~iEDV~~g~~l~~~~gi~~~~~~~~~  305 (349)
T KOG2287|consen  231 IRDKTSKWYVPESEYPCSVYPPYASGPGYVISGDAARRLLKASKH-LKFFPIEDVFVGGCLAEDLGIKPVNHPGFF  305 (349)
T ss_pred             CCCCCCCCccCHHHCCCCCCCCcCCCceeEecHHHHHHHHHHhcC-CCccchHHHHHHHHHHHhcCCCcccCcccc
Confidence            999999999999999999999999999999999999999999998 999999999995555555699999998743

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=2e-48  Score=404.60  Aligned_cols=218  Identities=31%  Similarity=0.442  Sum_probs=188.0

Q ss_pred             CCCC-CCCCcCCCCCCccccccCCCCCC---cEEEEEEcCCCCHHHHHHHHHHhcc-------cceEEEEecCC-ChhHH
Q psy12347         14 LLPP-DDSTRLINLTNFEFLINPPCLDT---VYLVLIHSAPYNYERRRLIRNTWGP-------RVSLYFFIGET-DPSNQ   81 (428)
Q Consensus        14 ~l~~-~~~~~~~~~~~~~~~~~~~C~~~---~lli~V~S~~~~~~~R~~IR~TW~~-------~~~~~F~vG~~-~~~~~   81 (428)
                      +||- +++.++++...   +..++|+..   +|+|+|+|+|+|+++|+|||+|||+       .++++|++|.+ +...+
T Consensus       358 ~~p~~~~~~~~~d~e~---lkAppL~~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~  434 (636)
T PLN03133        358 GLPTSEDSEHVIDLEA---LKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVN  434 (636)
T ss_pred             CCCCCCchhcccchHH---hcCCCCCCCCceEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHH
Confidence            4442 34455555333   346678754   9999999999999999999999998       58899999999 77889


Q ss_pred             HHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEE
Q psy12347         82 TRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCS  161 (428)
Q Consensus        82 ~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~  161 (428)
                      ..|++|+++||||||+||.|+|+|||+|+++++.|+. +|++++|+||+|||+|||+++|+++|....   ..+.+++|.
T Consensus       435 ~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~-~c~~akFilK~DDDvFVnv~~Ll~~L~~~~---~~~~Ly~G~  510 (636)
T PLN03133        435 EELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGT-EVVSAKYVMKTDDDAFVRVDEVLASLKRTN---VSHGLLYGL  510 (636)
T ss_pred             HHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHHHH-hCCCceEEEEcCCceEEcHHHHHHHHHhcC---CCCceEEEE
Confidence            9999999999999999999999999999999999985 688999999999999999999999997653   245677777


Q ss_pred             EeecCCcccccCCCCcccCccccCCCCCcCccccceEEeCHHHHHHHHHHhh--ccCCCCCcchhhhHHHHHH---hcCC
Q psy12347        162 IVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQ--TDQEYFWVDDVFITGIVFS---KLNL  236 (428)
Q Consensus       162 ~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~--~~~~~~~~eDv~itG~~~~---~~~i  236 (428)
                      + ..+..|+|++.+|||+|.++||.+.|||||+|+|||||+++|+.|+.++.  . .++|++||||+ |+|++   +.|+
T Consensus       511 v-~~~~~PiRd~~sKWYVs~~eyp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~-l~~f~lEDVyv-Gi~l~~l~k~gl  587 (636)
T PLN03133        511 I-NSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGR-LKMFKLEDVAM-GIWIAEMKKEGL  587 (636)
T ss_pred             e-ccCCCcccCCCCCCCCCHHHCCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcc-cCcCChhhHhH-HHHHHHhcccCC
Confidence            6 77888999999999999999999999999999999999999999998763  5 89999999998 99976   4566


Q ss_pred             ceeec
Q psy12347        237 THAKF  241 (428)
Q Consensus       237 ~~~~~  241 (428)
                      .+.+.
T Consensus       588 ~v~~~  592 (636)
T PLN03133        588 EVKYE  592 (636)
T ss_pred             Cceee
Confidence            65443

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=2e-48  Score=359.16  Aligned_cols=185  Identities=42%  Similarity=0.718  Sum_probs=172.8

Q ss_pred             HHHHHHHHHhcc-------cceEEEEecCC---ChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCCC
Q psy12347         54 ERRRLIRNTWGP-------RVSLYFFIGET---DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPH  123 (428)
Q Consensus        54 ~~R~~IR~TW~~-------~~~~~F~vG~~---~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~  123 (428)
                      ++|++||+|||+       +++++|++|.+   ++..+..|++|+++|+||||+||.|+|+|||+|++++|+|+.++|++
T Consensus         1 ~rR~~IR~TW~~~~~~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~   80 (195)
T PF01762_consen    1 ERRQAIRETWGNQRNFKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWASKHCPN   80 (195)
T ss_pred             ChHHHHHHHHhcccccCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHHhhCCc
Confidence            589999999998       88999999999   45678889999999999999999999999999999999999999999


Q ss_pred             ccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCccccceEEeCHH
Q psy12347        124 VKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPD  203 (428)
Q Consensus       124 ~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~~  203 (428)
                      ++|++|+|||+|||+++|.++|.+... ....+.++|+. ..+.+|.|++.+|||+|.++||...||+||+|+||+||++
T Consensus        81 ~~~v~k~DDD~~vn~~~l~~~L~~~~~-~~~~~~~~g~~-~~~~~~~r~~~~kw~v~~~~y~~~~yP~y~~G~~yvls~~  158 (195)
T PF01762_consen   81 AKYVLKVDDDVFVNPDRLVSFLKSLKQ-DPSKNSIYGGC-IKNGPPIRDPSSKWYVSEEEYPDDYYPPYCSGGGYVLSSD  158 (195)
T ss_pred             hhheeecCcEEEEehHHhhhhhhhccc-Ccccccccccc-ccCCccccccccCceeeeeecccccCCCcCCCCeEEecHH
Confidence            999999999999999999999998721 14567788888 7778899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        204 VVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       204 ~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      +++.|+.++.. .+.+++|||++ |+|+.++||+++|++
T Consensus       159 ~v~~i~~~~~~-~~~~~~eDv~i-Gi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  159 VVKRIYKASSH-TPFFPLEDVFI-GILAEKLGIKPIHDP  195 (195)
T ss_pred             HHHHHHHHhhc-CCCCCchHHHH-HHHHHHCCCCccCCC
Confidence            99999999999 99999999999 999999999998874

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=4.1e-47  Score=374.27  Aligned_cols=201  Identities=20%  Similarity=0.263  Sum_probs=179.5

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc------------cceEEEEecCC---ChhHHHHHHHHHhhCCCEEEecccCcCCc
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP------------RVSLYFFIGET---DPSNQTRLDIESETYHDIVQGRFWDSYRN  105 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~------------~~~~~F~vG~~---~~~~~~~l~~E~~~~~DIl~~d~~D~y~n  105 (428)
                      +++|+|+|+|+|++||++||+|||+            .++++|++|.+   +...+++|++|+++|||||++||+|+|.|
T Consensus       140 ~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~N  219 (408)
T PLN03193        140 LMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLE  219 (408)
T ss_pred             EEEEEEeCCCCCHHHHHHHHHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEeccccccc
Confidence            9999999999999999999999996            48999999998   45788999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCcccc-
Q psy12347        106 LTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEY-  184 (428)
Q Consensus       106 lt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y-  184 (428)
                      ||+||+++|+|+.++| +++|+||+|||+|||+++|+++|....   ..+++|+|.+ . .. |+|+..++||.+++.| 
T Consensus       220 LT~KTl~~f~wA~~~~-dAkF~mK~DDDvfVnv~~L~~~L~~~~---~~~rlYiG~m-~-~g-Pvr~~~~~ky~epe~w~  292 (408)
T PLN03193        220 LSAKTKTYFATAVAMW-DADFYVKVDDDVHVNIATLGETLVRHR---KKPRVYIGCM-K-SG-PVLSQKGVRYHEPEYWK  292 (408)
T ss_pred             chHHHHHHHHHHHHcC-CCeEEEEcCCCceEcHHHHHHHHHhcC---CCCCEEEEec-c-cC-ccccCCCCcCcCccccc
Confidence            9999999999999988 899999999999999999999997662   2345777766 3 33 5677666677776766 


Q ss_pred             ---CCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecCCCCCCCCc
Q psy12347        185 ---RDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEP  250 (428)
Q Consensus       185 ---~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~~~~~~~~~  250 (428)
                         +++.|||||+|+|||||+++++.|+.+... .+.+++||||+ |+|+..++|+++|.+.||+...+
T Consensus       293 ~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~-L~~y~~EDV~v-G~Wl~~L~V~~vdd~~fcc~~~~  359 (408)
T PLN03193        293 FGENGNKYFRHATGQLYAISKDLASYISINQHV-LHKYANEDVSL-GSWFIGLDVEHIDDRRLCCGTPP  359 (408)
T ss_pred             ccCccccCCCCCCcceEEehHHHHHHHHhChhh-hcccCcchhhh-hhHhccCCceeeecccccCCCCc
Confidence               679999999999999999999999988887 88899999998 99999999999999999987544

>KOG2288|consensus

Probab=100.00  E-value=1.9e-35  Score=270.85  Aligned_cols=200  Identities=24%  Similarity=0.309  Sum_probs=182.8

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc------------cceEEEEecCC--ChhHHHHHHHHHhhCCCEEEec-ccCcCCc
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP------------RVSLYFFIGET--DPSNQTRLDIESETYHDIVQGR-FWDSYRN  105 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~------------~~~~~F~vG~~--~~~~~~~l~~E~~~~~DIl~~d-~~D~y~n  105 (428)
                      +++|+|.|+++..+||+++|+||+.            ++.++|++|..  +....++|++|.++|+|.+.+| .+|.|.+
T Consensus        12 l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~~~~g~~~~r~ie~E~~~~~DfllLd~h~E~Y~~   91 (274)
T KOG2288|consen   12 LLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGTATLGASLDRALEEENAQHGDFLLLDRHEEAYEE   91 (274)
T ss_pred             EEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEeccCCccHHHHHHHHHHHHhcCCeEeechhHHHHHH
Confidence            8999999999999999999999998            89999999995  8889999999999999999999 9999999


Q ss_pred             hhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccC
Q psy12347        106 LTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYR  185 (428)
Q Consensus       106 lt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~  185 (428)
                      |+.||+.++.++..++ +++|++|+|||+|||+..|...|.+...   .+..|+|.  .++++|+-++.+|||.|+. +-
T Consensus        92 Ls~Kt~~~f~~A~~~~-daeFyvKvDDDv~v~l~~L~~~la~~r~---~pr~YiGc--mksg~v~~~~~~kw~EpeW-kf  164 (274)
T KOG2288|consen   92 LSAKTKAFFSAAVAHW-DAEFYVKVDDDVYVRLARLGTLLARERS---HPRLYIGC--MKSGPVLTQPGGKWYEPEW-KF  164 (274)
T ss_pred             HHHHHHHHHHHHHHhc-cceEEEEccccceecHHHHHHHHHhhcc---CCceEEEE--ecCCccccCCCCcccChhh-hc
Confidence            9999999999999999 8999999999999999999999998832   35566665  4888888888999999983 33


Q ss_pred             CCC--CcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecCCCCCCCC
Q psy12347        186 DHF--YPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE  249 (428)
Q Consensus       186 ~~~--yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~~~~~~~~  249 (428)
                      +..  |.+|+.|++|+||++++..|..+.+. ...+..|||.+ |.|+..++|++.|.+.+|+...
T Consensus       165 g~~g~YfrhA~G~~YvlS~dLa~yi~in~~l-L~~y~nEDVSl-GaW~~gldV~h~dd~rlC~~~~  228 (274)
T KOG2288|consen  165 GDNGNYFRHATGGGYVLSKDLATYISINRQL-LHKYANEDVSL-GAWMIGLDVEHVDDPRLCCSTP  228 (274)
T ss_pred             CcccccchhccCceEEeeHHHHHHHHHhHHH-HHhhccCCccc-ceeeeeeeeeEecCCcccccch
Confidence            333  99999999999999999999999888 88999999998 9999999999999999998765

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=99.97  E-value=1.1e-30  Score=254.09  Aligned_cols=176  Identities=18%  Similarity=0.196  Sum_probs=150.6

Q ss_pred             CCCCC--cEEEEEEcCCCC--HHHHHHHHHHhcc-------------cceEEEEecCC-Ch--hHHHHHHHHHhhCCCEE
Q psy12347         36 PCLDT--VYLVLIHSAPYN--YERRRLIRNTWGP-------------RVSLYFFIGET-DP--SNQTRLDIESETYHDIV   95 (428)
Q Consensus        36 ~C~~~--~lli~V~S~~~~--~~~R~~IR~TW~~-------------~~~~~F~vG~~-~~--~~~~~l~~E~~~~~DIl   95 (428)
                      .....  .++++|+|..++  +.||+++|+||.+             .+.++|++|.. +.  +.+.+|++|+++|+|||
T Consensus        74 ~w~~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIV  153 (382)
T PTZ00210         74 VWKAQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDII  153 (382)
T ss_pred             HhccCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEE
Confidence            35544  899999999998  9999999999998             56789999998 44  89999999999999999


Q ss_pred             Eecc------------------cCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcce
Q psy12347         96 QGRF------------------WDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNL  157 (428)
Q Consensus        96 ~~d~------------------~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~  157 (428)
                      +++|                  .|++.|+|+||+++++|+...||+++|++|+|||+|||++++++.|+..    +.+.+
T Consensus       154 ilpf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~----prr~L  229 (382)
T PTZ00210        154 TLPTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVM----PRHGL  229 (382)
T ss_pred             EEecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhC----CCCce
Confidence            9999                  7888999999999999999999999999999999999999999999766    34557


Q ss_pred             EEEEEeecCCcccccCCCCcccCccccCCCCCcCccccceEEeCHHHHHHHHHHhhc-cC---------------CCCCc
Q psy12347        158 LMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQT-DQ---------------EYFWV  221 (428)
Q Consensus       158 ~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~-~~---------------~~~~~  221 (428)
                      ++|.+ .....+.|++               +|+||+|+||+||+++++.|++.... ..               -.+..
T Consensus       230 Y~G~v-~~~~~p~Rd~---------------~PpY~~G~gYvLSrDVA~~Lvs~~pl~rL~~~pys~~~~~~y~~~~~~~  293 (382)
T PTZ00210        230 YMGRY-NYYNRIWRRN---------------QLTYVNGYCITLSRDTAQAIISYKPLERLVNMPFSMWDYFDFLDLGMFY  293 (382)
T ss_pred             EEEee-CCCCccccCC---------------CCCccccceeeccHHHHHHHHhhChHhHhhcCCCchHHHHHHHHhhcCc
Confidence            88877 5555566643               59999999999999999999987432 01               12578


Q ss_pred             chhhhHHHHHH
Q psy12347        222 DDVFITGIVFS  232 (428)
Q Consensus       222 eDv~itG~~~~  232 (428)
                      ||+.+ |.++.
T Consensus       294 EDiMv-G~vLr  303 (382)
T PTZ00210        294 EDVMV-GMILR  303 (382)
T ss_pred             hHHHH-HHHHH
Confidence            99997 99985

>KOG2287|consensus

Probab=99.96  E-value=7.6e-29  Score=247.30  Aligned_cols=123  Identities=41%  Similarity=0.711  Sum_probs=108.9

Q ss_pred             CCCCccccc-cCC-CC-C--ceEEEEEECCCCChHHHHHHHHHhhcc-------ceEEEEEccCCcc--hhhhhHhhhhc
Q psy12347        305 NLTNFEFLI-NPP-CL-D--TVYLVLIHSAPYNYDKRRLIRNTWGTR-------VSVYFFIGETDPS--NQTRLDIESET  370 (428)
Q Consensus       305 ~~~~~~~~~-~~~-c~-~--~~~li~V~S~~~~~~~R~~iR~TW~~~-------~~~~F~~g~~~~~--~~~~l~~E~~~  370 (428)
                      ++..+...+ .|+ |. .  +.++++|+|+++|++||++||+|||++       ++.+|++|.+..+  .+++|.+|++.
T Consensus        75 ~~~~~~~~l~~p~~~~~~~~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~  154 (349)
T KOG2287|consen   75 DFQKFFYLLYLPEICDPDRPPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARL  154 (349)
T ss_pred             hhccChhhhcCChhhcCCCCceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHH
Confidence            555555444 454 43 2  578999999999999999999999983       6789999998643  48899999999


Q ss_pred             CCCeEEeeeccCCCChHHHHHHHHHHHHHhCCCccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        371 YHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       371 ~~Dii~~~~~d~y~nlt~K~~~~l~w~~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      ||||||+||.|+|.|+|+||+++++|+..+||+|+||+|+|||+|||+++|+.+|.+
T Consensus       155 ygDIi~~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~  211 (349)
T KOG2287|consen  155 YGDIIQVDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDK  211 (349)
T ss_pred             hCCEEEEecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999986

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=99.95  E-value=1.4e-28  Score=243.07  Aligned_cols=108  Identities=25%  Similarity=0.374  Sum_probs=99.9

Q ss_pred             CceEEEEEECCCCChHHHHHHHHHhhcc------------ceEEEEEccCC---cchhhhhHhhhhcCCCeEEeeeccCC
Q psy12347        319 DTVYLVLIHSAPYNYDKRRLIRNTWGTR------------VSVYFFIGETD---PSNQTRLDIESETYHDIVQGRFWDSY  383 (428)
Q Consensus       319 ~~~~li~V~S~~~~~~~R~~iR~TW~~~------------~~~~F~~g~~~---~~~~~~l~~E~~~~~Dii~~~~~d~y  383 (428)
                      ..+++|+|+|+++|++||++||+|||++            ++++|++|.+.   +..+++|++|+++|||||++||.|+|
T Consensus       138 ~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY  217 (408)
T PLN03193        138 RYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGY  217 (408)
T ss_pred             eEEEEEEEeCCCCCHHHHHHHHHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEeccccc
Confidence            4678899999999999999999999862            56889999873   46788999999999999999999999


Q ss_pred             CChHHHHHHHHHHHHHhCCCccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        384 RNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       384 ~nlt~K~~~~l~w~~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      .|||+||+++|+|+.++| +|+|+||+|||+|||+++|+.+|++
T Consensus       218 ~NLT~KTl~~f~wA~~~~-dAkF~mK~DDDvfVnv~~L~~~L~~  260 (408)
T PLN03193        218 LELSAKTKTYFATAVAMW-DADFYVKVDDDVHVNIATLGETLVR  260 (408)
T ss_pred             ccchHHHHHHHHHHHHcC-CCeEEEEcCCCceEcHHHHHHHHHh
Confidence            999999999999999987 7999999999999999999999975

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=99.95  E-value=5.8e-28  Score=251.94  Aligned_cols=118  Identities=31%  Similarity=0.449  Sum_probs=104.7

Q ss_pred             ccccccCCCC---CceEEEEEECCCCChHHHHHHHHHhhcc-------ceEEEEEccC-CcchhhhhHhhhhcCCCeEEe
Q psy12347        309 FEFLINPPCL---DTVYLVLIHSAPYNYDKRRLIRNTWGTR-------VSVYFFIGET-DPSNQTRLDIESETYHDIVQG  377 (428)
Q Consensus       309 ~~~~~~~~c~---~~~~li~V~S~~~~~~~R~~iR~TW~~~-------~~~~F~~g~~-~~~~~~~l~~E~~~~~Dii~~  377 (428)
                      +.-+..|+|+   +.+++|+|+|+|+|++||+|||+|||+.       ++.+|++|.+ ++..+.+|++|+++||||||+
T Consensus       371 ~e~lkAppL~~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~  450 (636)
T PLN03133        371 LEALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLM  450 (636)
T ss_pred             hHHhcCCCCCCCCceEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEE
Confidence            4444556664   3578999999999999999999999973       5688999987 456788999999999999999


Q ss_pred             eeccCCCChHHHHHHHHHHHHHhCCCccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        378 RFWDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       378 ~~~d~y~nlt~K~~~~l~w~~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      ||.|+|+|+|+||++++.|+. +|++|+|+||+|||+|||+++|+++|++
T Consensus       451 dF~DsY~NLTlKtl~~~~wa~-~c~~akFilK~DDDvFVnv~~Ll~~L~~  499 (636)
T PLN03133        451 PFVDYYSLITWKTLAICIFGT-EVVSAKYVMKTDDDAFVRVDEVLASLKR  499 (636)
T ss_pred             eeechhhhhHHHHHHHHHHHH-hCCCceEEEEcCCceEEcHHHHHHHHHh
Confidence            999999999999999999975 6889999999999999999999999965

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.93  E-value=3.3e-26  Score=211.04  Aligned_cols=94  Identities=49%  Similarity=0.832  Sum_probs=87.7

Q ss_pred             HHHHHHHHHhhcc-------ceEEEEEccCC---cchhhhhHhhhhcCCCeEEeeeccCCCChHHHHHHHHHHHHHhCCC
Q psy12347        334 DKRRLIRNTWGTR-------VSVYFFIGETD---PSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPH  403 (428)
Q Consensus       334 ~~R~~iR~TW~~~-------~~~~F~~g~~~---~~~~~~l~~E~~~~~Dii~~~~~d~y~nlt~K~~~~l~w~~~~c~~  403 (428)
                      +||++||+|||+.       ++++|++|.+.   ...++.|++|+++||||||+||.|+|.|+|+||+++|+|+.++||+
T Consensus         1 ~rR~~IR~TW~~~~~~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~   80 (195)
T PF01762_consen    1 ERRQAIRETWGNQRNFKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWASKHCPN   80 (195)
T ss_pred             ChHHHHHHHHhcccccCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHHhhCCc
Confidence            5899999999974       57899999875   3567789999999999999999999999999999999999999999


Q ss_pred             ccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        404 VKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       404 ~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      ++|++|+|||+|||+++|.++|++
T Consensus        81 ~~~v~k~DDD~~vn~~~l~~~L~~  104 (195)
T PF01762_consen   81 AKYVLKVDDDVFVNPDRLVSFLKS  104 (195)
T ss_pred             hhheeecCcEEEEehHHhhhhhhh
Confidence            999999999999999999999975

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=99.85  E-value=2.5e-21  Score=188.88  Aligned_cols=108  Identities=20%  Similarity=0.249  Sum_probs=96.9

Q ss_pred             ceEEEEEECCCCC--hHHHHHHHHHhhc-------------cceEEEEEccCC-c--chhhhhHhhhhcCCCeEEeee--
Q psy12347        320 TVYLVLIHSAPYN--YDKRRLIRNTWGT-------------RVSVYFFIGETD-P--SNQTRLDIESETYHDIVQGRF--  379 (428)
Q Consensus       320 ~~~li~V~S~~~~--~~~R~~iR~TW~~-------------~~~~~F~~g~~~-~--~~~~~l~~E~~~~~Dii~~~~--  379 (428)
                      -.++++|.|..++  +.||+++|+||.+             ++..+|++|.+. .  +.++++++|+++|||||.++|  
T Consensus        80 ~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVilpf~d  159 (382)
T PTZ00210         80 FLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDIITLPTND  159 (382)
T ss_pred             ceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEEEEeccc
Confidence            3456779999998  9999999999986             245779999873 3  678999999999999999999  


Q ss_pred             ----------------ccCCCChHHHHHHHHHHHHHhCCCccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        380 ----------------WDSYRNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       380 ----------------~d~y~nlt~K~~~~l~w~~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                                      .|++.|+|+||+++++|+.+.||+++||+|+|||+|||+++++++|+.
T Consensus       160 ~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~  223 (382)
T PTZ00210        160 VSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRV  223 (382)
T ss_pred             CccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhh
Confidence                            778889999999999999999999999999999999999999999964

>KOG2288|consensus

Probab=99.82  E-value=5e-20  Score=169.55  Aligned_cols=109  Identities=26%  Similarity=0.415  Sum_probs=100.2

Q ss_pred             CceEEEEEECCCCChHHHHHHHHHhhcc------------ceEEEEEccC--CcchhhhhHhhhhcCCCeEEee-eccCC
Q psy12347        319 DTVYLVLIHSAPYNYDKRRLIRNTWGTR------------VSVYFFIGET--DPSNQTRLDIESETYHDIVQGR-FWDSY  383 (428)
Q Consensus       319 ~~~~li~V~S~~~~~~~R~~iR~TW~~~------------~~~~F~~g~~--~~~~~~~l~~E~~~~~Dii~~~-~~d~y  383 (428)
                      ..+++|+|.|+++..+||+.+|+||+..            +..+|++|..  +.+...+|++|+++|+|.+.+| ..|+|
T Consensus        10 k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~~~~g~~~~r~ie~E~~~~~DfllLd~h~E~Y   89 (274)
T KOG2288|consen   10 KVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGTATLGASLDRALEEENAQHGDFLLLDRHEEAY   89 (274)
T ss_pred             ceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEeccCCccHHHHHHHHHHHHhcCCeEeechhHHHH
Confidence            4567899999999999999999999863            4577999985  4578899999999999999999 99999


Q ss_pred             CChHHHHHHHHHHHHHhCCCccEEEEcCCceEeeHHHHHHHHhhC
Q psy12347        384 RNLTYKHTMVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTRT  428 (428)
Q Consensus       384 ~nlt~K~~~~l~w~~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~~  428 (428)
                      .+|+.||++++.++..++ +|+|++|+|||+|||+..|...|.++
T Consensus        90 ~~Ls~Kt~~~f~~A~~~~-daeFyvKvDDDv~v~l~~L~~~la~~  133 (274)
T KOG2288|consen   90 EELSAKTKAFFSAAVAHW-DAEFYVKVDDDVYVRLARLGTLLARE  133 (274)
T ss_pred             HHHHHHHHHHHHHHHHhc-cceEEEEccccceecHHHHHHHHHhh
Confidence            999999999999999999 79999999999999999999999863

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.80  E-value=3.6e-19  Score=170.31  Aligned_cols=194  Identities=16%  Similarity=0.185  Sum_probs=101.0

Q ss_pred             cEEEEEEcCCCCHHHH-HHHHHHhcc-cceEEE-EecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERR-RLIRNTWGP-RVSLYF-FIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV  117 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R-~~IR~TW~~-~~~~~F-~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~  117 (428)
                      +++|+|+|++++++.| .+|++||++ .-...| +....+..+    ..+  .-.+++..+....+...+++.++++.+-
T Consensus         7 dI~i~V~T~~k~h~tR~~~I~~TW~~~~~~~~~ifsd~~d~~l----~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~y~   80 (252)
T PF02434_consen    7 DIFIAVKTTKKFHKTRAPAIKQTWAKRCNKQTFIFSDAEDPSL----PTV--TGVHLVNPNCDAGHCRKTLSCKMAYEYD   80 (252)
T ss_dssp             GEEEEEE--GGGTTTTHHHHHHTGGGGSGGGEEEEESS--HHH----HHH--HGGGEEE-------------HHHHHHHH
T ss_pred             cEEEEEEeCHHHHHHHHHHHHHHHHhhcCCceEEecCcccccc----ccc--cccccccCCCcchhhHHHHHHHHHHHHH
Confidence            8999999999988888 899999999 223344 343323322    222  3345666665555555555555555554


Q ss_pred             HhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCcc-ccc
Q psy12347        118 VYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHC-HGN  196 (428)
Q Consensus       118 ~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~-~G~  196 (428)
                      ...-++++|++++|||+||++++|+++|...+   ...+.++|.. ....+... .. +  .....-+...| .|+ +|+
T Consensus        81 ~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~---~~~~~yiG~~-~~~~~~~~-~~-~--~~~~~~~~~~~-~f~~GGa  151 (252)
T PF02434_consen   81 HFLNSDKDWFCFADDDTYVNVENLRRLLSKYD---PSEPIYIGRP-SGDRPIEI-IH-R--FNPNKSKDSGF-WFATGGA  151 (252)
T ss_dssp             HHHHHT-SEEEEEETTEEE-HHHHHHHHTTS----TTS--EEE-E-E---------------------------EE-GGG
T ss_pred             hhhcCCceEEEEEeCCceecHHHHHHHHhhCC---CccCEEeeee-ccCcccee-ec-c--ccccccCcCce-EeeCCCe
Confidence            33335789999999999999999999999985   3677888887 32222111 00 0  00000011122 344 678


Q ss_pred             eEEeCHHHHHHHHHHhhc-c-CCC----CCcchhhhHHHHHHh-cCCceeecCCCCCCCCc
Q psy12347        197 ILLYSPDVVFKLYQHLQT-D-QEY----FWVDDVFITGIVFSK-LNLTHAKFSWWPGHDEP  250 (428)
Q Consensus       197 ~YvlS~~~v~~l~~~~~~-~-~~~----~~~eDv~itG~~~~~-~~i~~~~~~~~~~~~~~  250 (428)
                      ||+||+.++++|...+.. . ...    -..||+.| |.|++. +||+.++++.|+.+.+.
T Consensus       152 G~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~l-G~ci~~~lgv~lt~s~~fhs~~~~  211 (252)
T PF02434_consen  152 GYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTL-GYCIENLLGVPLTHSPLFHSHLEN  211 (252)
T ss_dssp             -EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHH-HHHHHHTT---EEE-TT---SSS-
T ss_pred             eHHHhHHHHHHHhhhcccccccCCcCCCCCcccChh-hhhHHhcCCcceeechhhcccCcc
Confidence            999999999999553322 0 122    24899999 999998 99999999999876655

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246|consensus

Probab=99.63  E-value=2.4e-15  Score=150.00  Aligned_cols=170  Identities=19%  Similarity=0.237  Sum_probs=129.9

Q ss_pred             cEEEEEEcCCCCHHHH-HHHHHHhcc-cceEEEEe---cCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERR-RLIRNTWGP-RVSLYFFI---GETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFK  115 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R-~~IR~TW~~-~~~~~F~v---G~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~  115 (428)
                      .++++|.|++.+...| +++-+||++ .-+..|+-   +..+..           + -.|..+..|+|+++..|+..+++
T Consensus        92 ~v~cwv~t~~~~~~~~~~~v~~TW~~rc~~~~f~s~~~s~~~~~-----------f-~~v~~~~~~g~~~~~~ktr~~~~  159 (364)
T KOG2246|consen   92 RVLCWVLTSPMRHVTRADAVKETWLKRCDKGIFFSPTLSKDDSR-----------F-PTVYYNLPDGYRSLWRKTRIAFK  159 (364)
T ss_pred             eEEEEEEecCcCceeehhhhhcccccccCcceecCccCCCCCCc-----------C-ceeeccCCcchHHHHHHHHHHHH
Confidence            9999999999988888 699999999 55556654   333221           1 23468899999999999999999


Q ss_pred             HHHhhCC-CccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCccc
Q psy12347        116 WVVYNCP-HVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCH  194 (428)
Q Consensus       116 w~~~~c~-~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~  194 (428)
                      ++.++.. +++|++|+|||||+.++||..+|..++   +.++.++|.. .+...                 .+.|  --+
T Consensus       160 yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yD---p~~p~YiG~~-~~~~~-----------------~~~y--~~g  216 (364)
T KOG2246|consen  160 YVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYD---PEKPVYLGYR-SKSYF-----------------QNGY--SSG  216 (364)
T ss_pred             HHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcC---CCCcEEeccc-ccccc-----------------cccc--ccC
Confidence            9996555 599999999999999999999999995   4667788875 11110                 0111  127


Q ss_pred             cceEEeCHHHHHHHHHHhhcc---CCC-C--CcchhhhHHHHHHhcCCceeecCCCCC
Q psy12347        195 GNILLYSPDVVFKLYQHLQTD---QEY-F--WVDDVFITGIVFSKLNLTHAKFSWWPG  246 (428)
Q Consensus       195 G~~YvlS~~~v~~l~~~~~~~---~~~-~--~~eDv~itG~~~~~~~i~~~~~~~~~~  246 (428)
                      |+||++|..+++++++.....   .+. .  ..||+.| |.|++.+||.+++.....+
T Consensus       217 ~ag~~ls~aa~~~la~~l~~~~~~C~~~~~~~~eD~~i-~~Cl~~~GV~~~d~~d~dg  273 (364)
T KOG2246|consen  217 GAGYVLSFAALRRLAERLLNNEDKCPQRYPSYGEDRRI-GRCLAEVGVPATDERDEDG  273 (364)
T ss_pred             CCCcceeHHHHHHHHHHHhcchhhcccccCCchhHHHH-HHHHHHhCCCccCchhhhc
Confidence            789999999999988775441   122 2  3899999 9999999999998854443

>PLN03153 hypothetical protein; Provisional

Probab=99.20  E-value=1.8e-10  Score=117.27  Aligned_cols=179  Identities=16%  Similarity=0.163  Sum_probs=113.5

Q ss_pred             cEEEEEEcCCCCHHHH-HHHHHHhcccc--eEEEEecCCChhHHHHHHHHHhhCCCEEEecccCc----CCc---hhHH-
Q psy12347         41 VYLVLIHSAPYNYERR-RLIRNTWGPRV--SLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDS----YRN---LTYK-  109 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R-~~IR~TW~~~~--~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~----y~n---lt~K-  109 (428)
                      .++++|.++.+..+.| ..|+.+|.++.  ..+|+.....+.      .+...--- +.+. .|+    |.|   .... 
T Consensus       123 hIvF~I~~s~~~w~~R~~yik~wW~p~~~rg~v~ld~~~~~~------~~~~~~P~-i~is-~d~s~f~y~~~~Gh~sa~  194 (537)
T PLN03153        123 HIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQVSPE------EGDDSLPP-IMVS-EDTSRFRYTNPTGHPSGL  194 (537)
T ss_pred             cEEEEEEEchhhhhhhhhhhhhhcCcccceeEEEecccCCCC------CCcCCCCC-EEeC-CCcccccccCCCCcHHHH
Confidence            8999999988877655 89999999822  245554433110      00000001 1111 111    222   2221 


Q ss_pred             HH--HHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCC
Q psy12347        110 HT--MVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDH  187 (428)
Q Consensus       110 ~~--~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~  187 (428)
                      -+  ++++-+..+-|+++|++++|||||+.+++|++.|..++   ..++.|+|+. .....-.    ..+          
T Consensus       195 rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YD---ptkp~YIGs~-Se~~~qn----~~f----------  256 (537)
T PLN03153        195 RISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYD---PSEMVYVGGP-SESHSAN----SYF----------  256 (537)
T ss_pred             HHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcC---CCCCEEeccc-ccccccc----ccc----------
Confidence            12  33444445578999999999999999999999999995   4677888876 2221100    000          


Q ss_pred             CCcCccccceEEeCHHHHHHHHHHhhc---cCCCCCcchhhhHHHHHHhcCCceeecCCCCC
Q psy12347        188 FYPPHCHGNILLYSPDVVFKLYQHLQT---DQEYFWVDDVFITGIVFSKLNLTHAKFSWWPG  246 (428)
Q Consensus       188 ~yP~y~~G~~YvlS~~~v~~l~~~~~~---~~~~~~~eDv~itG~~~~~~~i~~~~~~~~~~  246 (428)
                      .|--.-+|+||+||+.+++.|......   ..+...-+|.-| |.|+..+||.++..++|.-
T Consensus       257 ~~~fA~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL-~~CL~elGV~LT~~~gfhQ  317 (537)
T PLN03153        257 SHNMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRL-HACITELGVPLSREPGFHQ  317 (537)
T ss_pred             ccccccCCceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHH-HHHHHHcCCCceecCCccc
Confidence            011122789999999999988775222   123345688888 9999999999999998863

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=98.85  E-value=4.8e-09  Score=100.52  Aligned_cols=101  Identities=22%  Similarity=0.317  Sum_probs=57.7

Q ss_pred             eEEEEEECCCC-ChHHHHHHHHHhhccce-EEE-EEccCCcchhhhhHhhhhcCCCeEEeeeccCCCChHHHHHHHHHHH
Q psy12347        321 VYLVLIHSAPY-NYDKRRLIRNTWGTRVS-VYF-FIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV  397 (428)
Q Consensus       321 ~~li~V~S~~~-~~~~R~~iR~TW~~~~~-~~F-~~g~~~~~~~~~l~~E~~~~~Dii~~~~~d~y~nlt~K~~~~l~w~  397 (428)
                      .++|+|+|+++ |..|-.+|++||++++. ..| +....+..+...      ...+++..+...++...+++.++.+.+-
T Consensus         7 dI~i~V~T~~k~h~tR~~~I~~TW~~~~~~~~~ifsd~~d~~l~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~y~   80 (252)
T PF02434_consen    7 DIFIAVKTTKKFHKTRAPAIKQTWAKRCNKQTFIFSDAEDPSLPTV------TGVHLVNPNCDAGHCRKTLSCKMAYEYD   80 (252)
T ss_dssp             GEEEEEE--GGGTTTTHHHHHHTGGGGSGGGEEEEESS--HHHHHH------HGGGEEE-------------HHHHHHHH
T ss_pred             cEEEEEEeCHHHHHHHHHHHHHHHHhhcCCceEEecCccccccccc------cccccccCCCcchhhHHHHHHHHHHHHH
Confidence            47899999998 55555799999999864 345 455444333322      3345555555555555555555555553


Q ss_pred             HHhCCCccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        398 VYNCPHVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       398 ~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      ...-++++|++++|||+||++++|+++|.+
T Consensus        81 ~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~  110 (252)
T PF02434_consen   81 HFLNSDKDWFCFADDDTYVNVENLRRLLSK  110 (252)
T ss_dssp             HHHHHT-SEEEEEETTEEE-HHHHHHHHTT
T ss_pred             hhhcCCceEEEEEeCCceecHHHHHHHHhh
Confidence            333357899999999999999999999974

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246|consensus

Probab=98.71  E-value=2.2e-08  Score=100.29  Aligned_cols=97  Identities=27%  Similarity=0.397  Sum_probs=77.9

Q ss_pred             CceEEEEEECCCCChHHH-HHHHHHhhccce-EEEEE---ccCCcchhhhhHhhhhcCCCeEEeeeccCCCChHHHHHHH
Q psy12347        319 DTVYLVLIHSAPYNYDKR-RLIRNTWGTRVS-VYFFI---GETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMV  393 (428)
Q Consensus       319 ~~~~li~V~S~~~~~~~R-~~iR~TW~~~~~-~~F~~---g~~~~~~~~~l~~E~~~~~Dii~~~~~d~y~nlt~K~~~~  393 (428)
                      +.-+++.|+|++.+...| +.+-+||+++.. ..|+.   ++.+.....            |..+..|+|+++..||..+
T Consensus        90 ~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~~~~f~s~~~s~~~~~f~~------------v~~~~~~g~~~~~~ktr~~  157 (364)
T KOG2246|consen   90 SGRVLCWVLTSPMRHVTRADAVKETWLKRCDKGIFFSPTLSKDDSRFPT------------VYYNLPDGYRSLWRKTRIA  157 (364)
T ss_pred             CceEEEEEEecCcCceeehhhhhcccccccCcceecCccCCCCCCcCce------------eeccCCcchHHHHHHHHHH
Confidence            345678899888866666 499999999865 44655   444443333            5788899999999999999


Q ss_pred             HHHHHHhCC-CccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        394 FKWVVYNCP-HVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       394 l~w~~~~c~-~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      ++++.++.. +++|++|+|||||+.++||..+|.+
T Consensus       158 ~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~  192 (364)
T KOG2246|consen  158 FKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSK  192 (364)
T ss_pred             HHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhh
Confidence            999985544 8999999999999999999999975

>PLN03153 hypothetical protein; Provisional

Probab=97.35  E-value=0.00094  Score=68.93  Aligned_cols=99  Identities=16%  Similarity=0.218  Sum_probs=59.2

Q ss_pred             eEEEEEECCCC-ChHHHHHHHHHhhcc-ce-EEEEEccCCcc-hhhhhHhhhhcCCCeEEeeeccC---C---CChHHH-
Q psy12347        321 VYLVLIHSAPY-NYDKRRLIRNTWGTR-VS-VYFFIGETDPS-NQTRLDIESETYHDIVQGRFWDS---Y---RNLTYK-  389 (428)
Q Consensus       321 ~~li~V~S~~~-~~~~R~~iR~TW~~~-~~-~~F~~g~~~~~-~~~~l~~E~~~~~Dii~~~~~d~---y---~nlt~K-  389 (428)
                      .++++|.++.+ +.+|+..|+.+|... ++ .+|+.....+. ....        ---|.+.-..+   |   .++... 
T Consensus       123 hIvF~I~~s~~~w~~R~~yik~wW~p~~~rg~v~ld~~~~~~~~~~~--------~P~i~is~d~s~f~y~~~~Gh~sa~  194 (537)
T PLN03153        123 HIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQVSPEEGDDS--------LPPIMVSEDTSRFRYTNPTGHPSGL  194 (537)
T ss_pred             cEEEEEEEchhhhhhhhhhhhhhcCcccceeEEEecccCCCCCCcCC--------CCCEEeCCCcccccccCCCCcHHHH
Confidence            46788877777 667778999999874 43 34544332110 0000        00022211111   2   233332 


Q ss_pred             HH--HHHHHHHHhCCCccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        390 HT--MVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       390 ~~--~~l~w~~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      -+  +.++-+..+.|+++|++++|||+|+.+++|++.|.+
T Consensus       195 rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~  234 (537)
T PLN03153        195 RISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSK  234 (537)
T ss_pred             HHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhh
Confidence            12  344444555789999999999999999999999975

>KOG3708|consensus

Probab=96.97  E-value=0.0054  Score=62.64  Aligned_cols=157  Identities=14%  Similarity=0.140  Sum_probs=104.3

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc-cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHH-HHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP-RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKH-TMVFKWVV  118 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~-~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~-~~~l~w~~  118 (428)
                      .+++.|+|.   ...--+|-+|=|. --++-|+.+.+.-.            .|.-+...+..|.--..|+ .+.++++.
T Consensus        27 rl~~aVmte---~tlA~a~NrT~ahhvprv~~F~~~~~i~------------~~~a~~~~vs~~d~r~~~~~s~vl~~l~   91 (681)
T KOG3708|consen   27 RLMAAVMTE---STLALAINRTLAHHVPRVHLFADSSRID------------NDLAQLTNVSPYDLRGQKTHSMVLGLLF   91 (681)
T ss_pred             HHHHHHHHH---HHHHHHHHHHHHhhcceeEEeecccccc------------ccHhhccccCccccCccccHHHHHHHHH
Confidence            778888882   2666788888888 44556666654111            1222233333343333444 55679998


Q ss_pred             hhCC-CccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCcc-ccc
Q psy12347        119 YNCP-HVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHC-HGN  196 (428)
Q Consensus       119 ~~c~-~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~-~G~  196 (428)
                      +++. +++|++.+-|+||||...|++++...++   +.++++|.-..       +.++               . | .|.
T Consensus        92 ~~~~~~YDwFll~~D~tYv~a~~L~~l~~hmsi---n~dlymGEe~~-------~gs~---------------r-C~l~~  145 (681)
T KOG3708|consen   92 NMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMSI---NEDLYMGEEAE-------DGSG---------------R-CRLDT  145 (681)
T ss_pred             HhhccccceEEEecCcceecHHHHHHHHhhccc---ccccccchhhh-------CccC---------------c-ccccc
Confidence            8876 4999999999999999999999998864   56788884311       1111               1 5 467


Q ss_pred             eEEeCHHHHHHHHHHhhc--cCCCCCcchhhhHHHHHH-hcCCcee
Q psy12347        197 ILLYSPDVVFKLYQHLQT--DQEYFWVDDVFITGIVFS-KLNLTHA  239 (428)
Q Consensus       197 ~YvlS~~~v~~l~~~~~~--~~~~~~~eDv~itG~~~~-~~~i~~~  239 (428)
                      ||++|+.++.+|-.+-..  +.-.-.=+|+.+ |.|.. ..||...
T Consensus       146 G~LLS~s~l~~lrnnle~C~~~~lsad~d~~l-grCi~~At~v~C~  190 (681)
T KOG3708|consen  146 GMLLSQSLLHALRNNLEGCRNDILSADPDEWL-GRCIQDATGVGCK  190 (681)
T ss_pred             ceeecHHHHHHHHhhHHHhhcccccCCcHHHH-HHHHHHhhcCCcc
Confidence            999999999999776443  022233567888 99998 4566543

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.62  E-value=0.033  Score=51.02  Aligned_cols=99  Identities=17%  Similarity=0.233  Sum_probs=60.3

Q ss_pred             EEEEcCCCCHHHHHHHHHHhcc-cceEEEEecCCChhHHHHHHHHHhhCCCEEE-----ecccCcCCchhHHHHHHHHHH
Q psy12347         44 VLIHSAPYNYERRRLIRNTWGP-RVSLYFFIGETDPSNQTRLDIESETYHDIVQ-----GRFWDSYRNLTYKHTMVFKWV  117 (428)
Q Consensus        44 i~V~S~~~~~~~R~~IR~TW~~-~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~-----~d~~D~y~nlt~K~~~~l~w~  117 (428)
                      |.|.|-+...+||+.+.+.... ++..-|+-|........  .+....++.-..     -...-+--.-++-++.+++-+
T Consensus         4 i~vInL~~~~~Rr~~~~~~~~~~~~~~e~~~Avdg~~l~~--~~~~~~~~~~~~~~~~~~~lt~gEiGC~lSH~~~w~~~   81 (200)
T PF01755_consen    4 IYVINLDRSTERRERIQQQLAKLGINFEFFDAVDGRDLSE--DELFRRYDPELFKKRYGRPLTPGEIGCALSHIKAWQRI   81 (200)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHcCCceEEEEeecccccch--HHHHHHhhhhhhhccccccCCcceEeehhhHHHHHHHH
Confidence            5677888999999999888876 67777776655222111  011111111110     011112222356788888888


Q ss_pred             HhhCCCccEEEEeCCceEecHHHHHHHHHh
Q psy12347        118 VYNCPHVKYVFKLDDDVFMNVIQLDELLTR  147 (428)
Q Consensus       118 ~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~  147 (428)
                      .+.  +.++.+..+||+.++.+ +.+.|..
T Consensus        82 v~~--~~~~~lIlEDDv~~~~~-f~~~l~~  108 (200)
T PF01755_consen   82 VDS--GLEYALILEDDVIFDPD-FKEFLEE  108 (200)
T ss_pred             HHc--CCCeEEEEecccccccc-HHHHHHH
Confidence            875  58999999999999855 4444443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=95.66  E-value=0.41  Score=44.13  Aligned_cols=188  Identities=14%  Similarity=0.109  Sum_probs=89.7

Q ss_pred             EEEEEEcCCCCHHHHHHHHHHhcc---cceEEEEecCCChhHHHHHHHHHhhCCCE--EEecccCcCCchh--HHHHHHH
Q psy12347         42 YLVLIHSAPYNYERRRLIRNTWGP---RVSLYFFIGETDPSNQTRLDIESETYHDI--VQGRFWDSYRNLT--YKHTMVF  114 (428)
Q Consensus        42 lli~V~S~~~~~~~R~~IR~TW~~---~~~~~F~vG~~~~~~~~~l~~E~~~~~DI--l~~d~~D~y~nlt--~K~~~~l  114 (428)
                      +.|+|++.-....-++.++.--.+   ...++.+...++.+..+.+.+-.+.++..  -.+...   .|.-  .|.. ++
T Consensus         3 v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~---~~~g~~~k~~-a~   78 (228)
T PF13641_consen    3 VSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRP---RNPGPGGKAR-AL   78 (228)
T ss_dssp             EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE-------HHHHHHHH-HH
T ss_pred             EEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecC---CCCCcchHHH-HH
Confidence            556777755555555666555544   66666666444334444455555666543  222111   2232  3433 45


Q ss_pred             HHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCC-----CCcccCccccCCCCC
Q psy12347        115 KWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYR-----SKWRVSFSEYRDHFY  189 (428)
Q Consensus       115 ~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~-----~kw~vs~~~y~~~~y  189 (428)
                      +++.+.. ..+|++.+|||+.+...-|.+.+.....  ..-..+.|..........-...     ..|+...... ...+
T Consensus        79 n~~~~~~-~~d~i~~lD~D~~~~p~~l~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  154 (228)
T PF13641_consen   79 NEALAAA-RGDYILFLDDDTVLDPDWLERLLAAFAD--PGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFRSG-RRAL  154 (228)
T ss_dssp             HHHHHH----SEEEEE-SSEEE-CHHHHHHHHHHHB--SS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-TT--B--
T ss_pred             HHHHHhc-CCCEEEEECCCcEECHHHHHHHHHHHHh--CCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhhhh-hccc
Confidence            7777776 5999999999999998888877666521  2233333333222211100000     0111110000 0111


Q ss_pred             c-CccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        190 P-PHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       190 P-~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      . .++.|++.++.++++..+-.   . -+....||..+ +.-+...|....-.+
T Consensus       155 ~~~~~~G~~~~~rr~~~~~~g~---f-d~~~~~eD~~l-~~r~~~~G~~~~~~~  203 (228)
T PF13641_consen  155 GVAFLSGSGMLFRRSALEEVGG---F-DPFILGEDFDL-CLRLRAAGWRIVYAP  203 (228)
T ss_dssp             --S-B--TEEEEEHHHHHHH-S------SSSSSHHHHH-HHHHHHTT--EEEEE
T ss_pred             ceeeccCcEEEEEHHHHHHhCC---C-CCCCcccHHHH-HHHHHHCCCcEEEEC
Confidence            1 45689999999999988842   1 12455699998 888888888866554

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=95.48  E-value=0.18  Score=42.97  Aligned_cols=115  Identities=14%  Similarity=0.138  Sum_probs=75.5

Q ss_pred             EEEEcCCCCHHHHHHHHHHhcc-cceEEEEecCCChhH-HHHHHHHHhhCCC-EEEecccCcCCchhHHHHHHHHHHHhh
Q psy12347         44 VLIHSAPYNYERRRLIRNTWGP-RVSLYFFIGETDPSN-QTRLDIESETYHD-IVQGRFWDSYRNLTYKHTMVFKWVVYN  120 (428)
Q Consensus        44 i~V~S~~~~~~~R~~IR~TW~~-~~~~~F~vG~~~~~~-~~~l~~E~~~~~D-Il~~d~~D~y~nlt~K~~~~l~w~~~~  120 (428)
                      +.|.+-+...+||..+++.... ++..-|+-|...... ...+......+.. .......-+--.-.+-++.+++-+.+.
T Consensus         2 i~vInL~~~~~Rr~~~~~~~~~~~~~~~~~~Avd~~~~~~~~~~~~~~~~~~~~~~~~l~~gEiGC~lSH~~~w~~~~~~   81 (128)
T cd06532           2 IFVINLDRSTDRRERMEAQLAALGLDFEFFDAVDGKDLSEEELAALYDALFLPRYGRPLTPGEIGCFLSHYKLWQKIVES   81 (128)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHcCCCeEEEeccccccCCHHHHHHHhHHHhhhhcCCCCChhhHHHHHHHHHHHHHHHHc
Confidence            4677888899999999987776 778888877762211 1222222111000 011112222233456778888888775


Q ss_pred             CCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCccccceEEe
Q psy12347        121 CPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLY  200 (428)
Q Consensus       121 c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~Yvl  200 (428)
                        +.++.+..+||+.+..+                                                      +..||++
T Consensus        82 --~~~~alIlEDDv~~~~~------------------------------------------------------~~~~Y~v  105 (128)
T cd06532          82 --NLEYALILEDDAILDPD------------------------------------------------------GTAGYLV  105 (128)
T ss_pred             --CCCeEEEEccCcEECCC------------------------------------------------------CceEEEe
Confidence              57999999999988755                                                      4468999


Q ss_pred             CHHHHHHHHHHhhc
Q psy12347        201 SPDVVFKLYQHLQT  214 (428)
Q Consensus       201 S~~~v~~l~~~~~~  214 (428)
                      |+..+++|++.+..
T Consensus       106 s~~~A~~ll~~~~~  119 (128)
T cd06532         106 SRKGAKKLLAALEP  119 (128)
T ss_pred             CHHHHHHHHHhCCC
Confidence            99999999997664

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.95  E-value=0.44  Score=40.75  Aligned_cols=157  Identities=14%  Similarity=0.152  Sum_probs=79.4

Q ss_pred             EEEEcCCCCHHHH-HHHHHHhcccceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCC
Q psy12347         44 VLIHSAPYNYERR-RLIRNTWGPRVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCP  122 (428)
Q Consensus        44 i~V~S~~~~~~~R-~~IR~TW~~~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~  122 (428)
                      |.+.-.+....+- +++++.-.....++.+-..++.+....+++-.+....+......+.. ++.    .++..+.++. 
T Consensus         4 ip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~-g~~----~~~n~~~~~a-   77 (169)
T PF00535_consen    4 IPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENL-GFS----AARNRGIKHA-   77 (169)
T ss_dssp             EEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCS-HHH----HHHHHHHHH--
T ss_pred             EEeeCCHHHHHHHHHHHhhccCCCEEEEEeccccccccccccccccccccccccccccccc-ccc----cccccccccc-
Confidence            3333344444443 56777733367776666555444444454444435556555555443 333    3334444443 


Q ss_pred             CccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcc-cccCCC---Cc-ccCc--cccCCCCCcCcccc
Q psy12347        123 HVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPV-LRTYRS---KW-RVSF--SEYRDHFYPPHCHG  195 (428)
Q Consensus       123 ~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~-~R~~~~---kw-~vs~--~~y~~~~yP~y~~G  195 (428)
                      ..+|++.+|||.++....|..++.....  ......+|......... ......   .+ ....  .......--.++.|
T Consensus        78 ~~~~i~~ld~D~~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (169)
T PF00535_consen   78 KGEYILFLDDDDIISPDWLEELVEALEK--NPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIG  155 (169)
T ss_dssp             -SSEEEEEETTEEE-TTHHHHHHHHHHH--CTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESS
T ss_pred             ceeEEEEeCCCceEcHHHHHHHHHHHHh--CCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccc
Confidence            5679999999999998877666655532  23445555542221111 111000   01 1100  11112223367788


Q ss_pred             ceEEeCHHHHHHH
Q psy12347        196 NILLYSPDVVFKL  208 (428)
Q Consensus       196 ~~YvlS~~~v~~l  208 (428)
                      ++.++++++++++
T Consensus       156 ~~~~~rr~~~~~~  168 (169)
T PF00535_consen  156 SCALFRRSVFEEI  168 (169)
T ss_dssp             SCEEEEEHHHHHC
T ss_pred             cEEEEEHHHHHhh
Confidence            8999999998764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.93  E-value=0.83  Score=39.22  Aligned_cols=86  Identities=16%  Similarity=0.123  Sum_probs=57.1

Q ss_pred             CccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCccccceEEeCH
Q psy12347        123 HVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSP  202 (428)
Q Consensus       123 ~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~  202 (428)
                      +.+|++.+|||..+....+...+.....  ...-.++++.                              +.|++.++++
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~--~~~~~~~~~~------------------------------~~~~~~~~~~  121 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQ--DPDVGIVGPK------------------------------VSGAFLLVRR  121 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHh--CCCceEEEcc------------------------------CceeeEeeeH
Confidence            6899999999999998888877765421  1111122211                              6889999999


Q ss_pred             HHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecCC
Q psy12347        203 DVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSW  243 (428)
Q Consensus       203 ~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~~  243 (428)
                      ++++.+-.-... . ....||..+ ..-+...|.+....+.
T Consensus       122 ~~~~~~~~~~~~-~-~~~~eD~~~-~~~~~~~g~~i~~~~~  159 (166)
T cd04186         122 EVFEEVGGFDED-F-FLYYEDVDL-CLRARLAGYRVLYVPQ  159 (166)
T ss_pred             HHHHHcCCCChh-h-hccccHHHH-HHHHHHcCCeEEEccc
Confidence            988876321111 1 126789988 6666677877766553

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=94.76  E-value=2.4  Score=38.26  Aligned_cols=141  Identities=11%  Similarity=0.082  Sum_probs=83.7

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCC--CEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYH--DIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDE  143 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~--DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~  143 (428)
                      ...++++...++......+++-.+.+.  ++......... ....|.- .+..+.+.+ +.+|++.+|+|+.+...-|.+
T Consensus        30 ~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~-~~n~g~~~a-~~d~i~~~D~D~~~~~~~l~~  106 (196)
T cd02520          30 KYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKV-GINPKVN-NLIKGYEEA-RYDILVISDSDISVPPDYLRR  106 (196)
T ss_pred             CeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcC-CCCHhHH-HHHHHHHhC-CCCEEEEECCCceEChhHHHH
Confidence            578888877663333445555555554  33222111110 1223433 234445554 689999999999998887877


Q ss_pred             HHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcch
Q psy12347        144 LLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDD  223 (428)
Q Consensus       144 ~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eD  223 (428)
                      .+.....  +.-. .+++.                             ++.|++.++.+++++++-.-. . ......||
T Consensus       107 l~~~~~~--~~~~-~v~~~-----------------------------~~~g~~~~~r~~~~~~~ggf~-~-~~~~~~eD  152 (196)
T cd02520         107 MVAPLMD--PGVG-LVTCL-----------------------------CAFGKSMALRREVLDAIGGFE-A-FADYLAED  152 (196)
T ss_pred             HHHHhhC--CCCC-eEEee-----------------------------cccCceeeeEHHHHHhccChH-H-HhHHHHHH
Confidence            7765421  1111 22211                             568999999999999873321 1 22234699


Q ss_pred             hhhHHHHHHhcCCceeecCCC
Q psy12347        224 VFITGIVFSKLNLTHAKFSWW  244 (428)
Q Consensus       224 v~itG~~~~~~~i~~~~~~~~  244 (428)
                      ..+ +.-+...|.+....+..
T Consensus       153 ~~l-~~rl~~~G~~i~~~~~~  172 (196)
T cd02520         153 YFL-GKLIWRLGYRVVLSPYV  172 (196)
T ss_pred             HHH-HHHHHHcCCeEEEcchh
Confidence            998 77777888877655543

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=94.48  E-value=0.93  Score=45.90  Aligned_cols=190  Identities=11%  Similarity=0.051  Sum_probs=100.9

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc---cceEEEEecCCChhHHHHHHHHHhhCCC--EEEecccCcCCchhHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP---RVSLYFFIGETDPSNQTRLDIESETYHD--IVQGRFWDSYRNLTYKHTMVFK  115 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~---~~~~~F~vG~~~~~~~~~l~~E~~~~~D--Il~~d~~D~y~nlt~K~~~~l~  115 (428)
                      .+-|+|++.-....-.+.++.-=.+   ...++++...++......+++=.++|.+  |.... ...-.....|.-.+.+
T Consensus        42 ~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~-~~~~~G~~~K~~~l~~  120 (373)
T TIGR03472        42 PVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVI-DARRHGPNRKVSNLIN  120 (373)
T ss_pred             CeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEE-CCCCCCCChHHHHHHH
Confidence            5777777655544444444332222   5777777766633223334333456666  32221 1111223356655444


Q ss_pred             HHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCC--------CCcccCccc-cCC
Q psy12347        116 WVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYR--------SKWRVSFSE-YRD  186 (428)
Q Consensus       116 w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~--------~kw~vs~~~-y~~  186 (428)
                       +.+.+ +.++++.+|+|+.+..+-|.+.+.....  +.-. +.++. ....+ .....        ..++.+... ...
T Consensus       121 -~~~~a-~ge~i~~~DaD~~~~p~~L~~lv~~~~~--~~v~-~V~~~-~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~  193 (373)
T TIGR03472       121 -MLPHA-RHDILVIADSDISVGPDYLRQVVAPLAD--PDVG-LVTCL-YRGRP-VPGFWSRLGAMGINHNFLPSVMVARA  193 (373)
T ss_pred             -HHHhc-cCCEEEEECCCCCcChhHHHHHHHHhcC--CCcc-eEecc-ccCCC-CCCHHHHHHHHHhhhhhhHHHHHHHh
Confidence             44554 7999999999999998888877766521  1112 23332 11111 00000        011111100 000


Q ss_pred             CCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeec
Q psy12347        187 HFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  241 (428)
Q Consensus       187 ~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~  241 (428)
                      ..-+.+|.|+++++.+++.+.+---..  ....-.||+.+ |.-+.+.|.+..-.
T Consensus       194 ~~~~~~~~G~~~a~RR~~l~~iGGf~~--~~~~~~ED~~l-~~~i~~~G~~v~~~  245 (373)
T TIGR03472       194 LGRARFCFGATMALRRATLEAIGGLAA--LAHHLADDYWL-GELVRALGLRVVLA  245 (373)
T ss_pred             ccCCccccChhhheeHHHHHHcCChHH--hcccchHHHHH-HHHHHHcCCeEEec
Confidence            011356889999999999998743222  12223599998 88888888876543

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.23  E-value=1.9  Score=38.85  Aligned_cols=157  Identities=11%  Similarity=0.089  Sum_probs=77.1

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCC-CEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYH-DIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL  144 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~-DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~  144 (428)
                      .+.++++-..+.......+++-.++++ .+.......+ .....    .+......+ +.+|++..|+|..+....|.++
T Consensus        27 ~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~-~G~~~----~~n~g~~~~-~g~~v~~ld~Dd~~~~~~l~~~  100 (214)
T cd04196          27 NDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKN-LGVAR----NFESLLQAA-DGDYVFFCDQDDIWLPDKLERL  100 (214)
T ss_pred             CeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCC-ccHHH----HHHHHHHhC-CCCEEEEECCCcccChhHHHHH
Confidence            566777765553333344444444553 2333322221 12222    222333444 6899999999999988888877


Q ss_pred             HHhccCCCCCcceEEEEEee-cC-Cccccc-CC-CCcccCccccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCC
Q psy12347        145 LTRTLSPHGTRNLLMCSIVW-EK-SPVLRT-YR-SKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFW  220 (428)
Q Consensus       145 L~~~~~~~~~~~~~~g~~~~-~~-~~~~R~-~~-~kw~vs~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~  220 (428)
                      +..... ......+.|.... .. ...... .. ...+.+...+.......++.|++.++.+++++++..-...   ...
T Consensus       101 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~---~~~  176 (214)
T cd04196         101 LKAFLK-DDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELALPFPDA---DVI  176 (214)
T ss_pred             HHHHhc-CCCceEEecCcEEECCCCCCcccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhhcccccc---ccc
Confidence            776221 0222333333211 11 111110 00 0000000011111223566788999999999887442221   156


Q ss_pred             cchhhhHHHHHHh
Q psy12347        221 VDDVFITGIVFSK  233 (428)
Q Consensus       221 ~eDv~itG~~~~~  233 (428)
                      .||.++ .+.+..
T Consensus       177 ~~D~~~-~~~~~~  188 (214)
T cd04196         177 MHDWWL-ALLASA  188 (214)
T ss_pred             cchHHH-HHHHHH
Confidence            889887 555544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=93.80  E-value=2.9  Score=38.66  Aligned_cols=165  Identities=9%  Similarity=-0.075  Sum_probs=84.9

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  145 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L  145 (428)
                      ...++.+-+.+..+....++...+++..+....-..    .. + -.+++...+.. +.+|++.+|+|..+...-|.+.+
T Consensus        31 ~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~----~~-~-~~a~N~g~~~a-~~d~v~~lD~D~~~~~~~l~~~~  103 (249)
T cd02525          31 LIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK----RI-Q-SAGLNIGIRNS-RGDIIIRVDAHAVYPKDYILELV  103 (249)
T ss_pred             ccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC----CC-c-hHHHHHHHHHh-CCCEEEEECCCccCCHHHHHHHH
Confidence            456666655554344455555555444444433221    11 1 13455555554 68999999999999888787777


Q ss_pred             HhccCCCCCcceEEEEEeecCCcccc-----cCCCCcccCccccCC--CCCcCccccceEEeCHHHHHHHHHHhhccCCC
Q psy12347        146 TRTLSPHGTRNLLMCSIVWEKSPVLR-----TYRSKWRVSFSEYRD--HFYPPHCHGNILLYSPDVVFKLYQHLQTDQEY  218 (428)
Q Consensus       146 ~~~~~~~~~~~~~~g~~~~~~~~~~R-----~~~~kw~vs~~~y~~--~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~  218 (428)
                      .....  .......|...........     ...+.+......+..  ...-.++.|++.++++++++++--  .. ..+
T Consensus       104 ~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~-~~~  178 (249)
T cd02525         104 EALKR--TGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKVGG--FD-ESL  178 (249)
T ss_pred             HHHhc--CCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHHhCC--CC-ccc
Confidence            65422  1222233332111111110     000000000000000  000114567778889998877632  11 234


Q ss_pred             CCcchhhhHHHHHHhcCCceeecCC
Q psy12347        219 FWVDDVFITGIVFSKLNLTHAKFSW  243 (428)
Q Consensus       219 ~~~eDv~itG~~~~~~~i~~~~~~~  243 (428)
                      ...||..+ +.-+...|......+.
T Consensus       179 ~~~eD~~l-~~r~~~~G~~~~~~~~  202 (249)
T cd02525         179 VRNEDAEL-NYRLRKAGYKIWLSPD  202 (249)
T ss_pred             CccchhHH-HHHHHHcCcEEEEcCC
Confidence            45799998 7777788888776654

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=93.23  E-value=6.2  Score=40.10  Aligned_cols=190  Identities=9%  Similarity=0.047  Sum_probs=97.1

Q ss_pred             cEEEEEEcCCCCHHHHHHHH----HHhcccceEEEEecCCChhHHHHHHHHHhhCC---CEEEecccCcCCchhHHH---
Q psy12347         41 VYLVLIHSAPYNYERRRLIR----NTWGPRVSLYFFIGETDPSNQTRLDIESETYH---DIVQGRFWDSYRNLTYKH---  110 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR----~TW~~~~~~~F~vG~~~~~~~~~l~~E~~~~~---DIl~~d~~D~y~nlt~K~---  110 (428)
                      .+-|+|.+.-+...-.+.++    +++.....++++-..+.....+.+++-.+++.   .+......+.-.+-..|.   
T Consensus        41 ~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A~  120 (384)
T TIGR03469        41 AVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWAV  120 (384)
T ss_pred             CEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHHH
Confidence            56677776444333333333    33322456776666552222223332233343   344443222112223453   


Q ss_pred             HHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccC------cccc
Q psy12347        111 TMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVS------FSEY  184 (428)
Q Consensus       111 ~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs------~~~y  184 (428)
                      -.+++.+.+.+++.+|++.+|+|+.+..+.|.+.+.....  .... +.++......   .....+...+      ...+
T Consensus       121 n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~--~~~~-~vs~~~~~~~---~~~~~~~~~~~~~~~~~~~~  194 (384)
T TIGR03469       121 SQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARA--EGLD-LVSLMVRLRC---ESFWEKLLIPAFVFFFQKLY  194 (384)
T ss_pred             HHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHh--CCCC-EEEecccccC---CCHHHHHHHHHHHHHHHHhc
Confidence            3466666666656899999999999998888887766532  1122 3333311100   0000000000      0000


Q ss_pred             C------CCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCcee
Q psy12347        185 R------DHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHA  239 (428)
Q Consensus       185 ~------~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~  239 (428)
                      +      .......+.|++.++++++.+++--....  .....||+.+ +.-+.+.|....
T Consensus       195 ~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~--~~~~~ED~~L-~~r~~~~G~~v~  252 (384)
T TIGR03469       195 PFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAI--RGALIDDCTL-AAAVKRSGGRIW  252 (384)
T ss_pred             chhhhcCCCccceeecceEEEEEHHHHHHcCCHHHH--hhCcccHHHH-HHHHHHcCCcEE
Confidence            0      01123456799999999999988322211  1235799998 777777775543

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.82  E-value=1.9  Score=39.29  Aligned_cols=160  Identities=10%  Similarity=0.064  Sum_probs=80.8

Q ss_pred             ceEEEEecCCChhHHHHHHHHHhh--CCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHH
Q psy12347         67 VSLYFFIGETDPSNQTRLDIESET--YHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL  144 (428)
Q Consensus        67 ~~~~F~vG~~~~~~~~~l~~E~~~--~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~  144 (428)
                      +.++.+-..+.......+. +...  +..+....... -.|. .|. .++++..+.+ ..+|++.+|+|..+..+-|.+.
T Consensus        29 ~eiivvdd~s~d~t~~~~~-~~~~~~~~~v~~~~~~~-~~~~-g~~-~a~n~g~~~~-~~d~i~~~D~D~~~~~~~l~~l  103 (229)
T cd04192          29 FEVILVDDHSTDGTVQILE-FAAAKPNFQLKILNNSR-VSIS-GKK-NALTTAIKAA-KGDWIVTTDADCVVPSNWLLTF  103 (229)
T ss_pred             eEEEEEcCCCCcChHHHHH-HHHhCCCcceEEeeccC-cccc-hhH-HHHHHHHHHh-cCCEEEEECCCcccCHHHHHHH
Confidence            5666665555333333444 2322  33445554433 1222 232 3355666665 6899999999999988777777


Q ss_pred             HHhccCCCCCcceEEEEEeecCCc-cc-ccCCCCcccCc---cccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCC
Q psy12347        145 LTRTLSPHGTRNLLMCSIVWEKSP-VL-RTYRSKWRVSF---SEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYF  219 (428)
Q Consensus       145 L~~~~~~~~~~~~~~g~~~~~~~~-~~-R~~~~kw~vs~---~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~  219 (428)
                      +.....  .....+.|........ .. +-..-.+....   .......+|..+.|+++++++++++++--- .. ....
T Consensus       104 ~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~ggf-~~-~~~~  179 (229)
T cd04192         104 VAFIQK--EQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEVGGF-EG-NDHI  179 (229)
T ss_pred             HHHhhc--CCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHhcCC-cc-cccc
Confidence            764422  2233444544221000 00 00000000000   001223356677899999999999887332 11 2234


Q ss_pred             CcchhhhHHHHHHhcCC
Q psy12347        220 WVDDVFITGIVFSKLNL  236 (428)
Q Consensus       220 ~~eDv~itG~~~~~~~i  236 (428)
                      ..||..+ +.-+...|.
T Consensus       180 ~~eD~~~-~~~~~~~g~  195 (229)
T cd04192         180 ASGDDEL-LLAKVASKY  195 (229)
T ss_pred             ccCCHHH-HHHHHHhCC
Confidence            5677766 554445454

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=92.54  E-value=1.9  Score=36.67  Aligned_cols=77  Identities=13%  Similarity=0.067  Sum_probs=43.0

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCCC-EEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYHD-IVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL  144 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~D-Il~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~  144 (428)
                      ...++.+-..++......+.++...+.- ++.....   .|..  .-..++++.+.+ +.+|++.+|+|..+....|.+.
T Consensus        26 ~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~---~~~g--~~~~~n~~~~~~-~~~~i~~~D~D~~~~~~~l~~~   99 (180)
T cd06423          26 KLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDK---ENGG--KAGALNAGLRHA-KGDIVVVLDADTILEPDALKRL   99 (180)
T ss_pred             ceEEEEEeCCCccchHHHHHHHhccccceEEEEEec---ccCC--chHHHHHHHHhc-CCCEEEEECCCCCcChHHHHHH
Confidence            4555555444433344445544444322 2222211   1211  234555666665 7999999999999987777776


Q ss_pred             HHhc
Q psy12347        145 LTRT  148 (428)
Q Consensus       145 L~~~  148 (428)
                      +...
T Consensus       100 ~~~~  103 (180)
T cd06423         100 VVPF  103 (180)
T ss_pred             HHHh
Confidence            4544

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.28  E-value=6.5  Score=35.29  Aligned_cols=138  Identities=15%  Similarity=0.058  Sum_probs=73.9

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  145 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L  145 (428)
                      ...++.+-+.+.......+++..+.++ +...... .......-.-.+++++.  ..+.+|++..|+|..+..+.+.+++
T Consensus        26 ~~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~-~n~g~~~~~n~~~~~a~--~~~~d~v~~ld~D~~~~~~~l~~l~  101 (202)
T cd04185          26 PDHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLP-ENLGGAGGFYEGVRRAY--ELGYDWIWLMDDDAIPDPDALEKLL  101 (202)
T ss_pred             CceEEEEECCCCcchHHHHHHhcCCCc-eEEEECc-cccchhhHHHHHHHHHh--ccCCCEEEEeCCCCCcChHHHHHHH
Confidence            345555544443334444444444433 3222222 12222333344566665  3368999999999999988777666


Q ss_pred             HhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhh
Q psy12347        146 TRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVF  225 (428)
Q Consensus       146 ~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~  225 (428)
                      .....  ..-..+.|.. ....       +                  .++|.++.+++++++--. .. .-+...||+.
T Consensus       102 ~~~~~--~~~~~~~~~~-~~~~-------~------------------~~~~~~~~~~~~~~~g~~-~~-~~~~~~eD~~  151 (202)
T cd04185         102 AYADK--DNPQFLAPLV-LDPD-------G------------------SFVGVLISRRVVEKIGLP-DK-EFFIWGDDTE  151 (202)
T ss_pred             HHHhc--CCceEeccee-EcCC-------C------------------ceEEEEEeHHHHHHhCCC-Ch-hhhccchHHH
Confidence            55521  1112222222 1110       0                  345678999888876311 11 1124569999


Q ss_pred             hHHHHHHhcCCce
Q psy12347        226 ITGIVFSKLNLTH  238 (428)
Q Consensus       226 itG~~~~~~~i~~  238 (428)
                      + +.-+...|...
T Consensus       152 ~-~~r~~~~G~~i  163 (202)
T cd04185         152 Y-TLRASKAGPGI  163 (202)
T ss_pred             H-HHHHHHcCCcE
Confidence            8 77777778766

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=91.84  E-value=8.5  Score=33.91  Aligned_cols=122  Identities=7%  Similarity=-0.087  Sum_probs=69.1

Q ss_pred             HHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcC
Q psy12347        112 MVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPP  191 (428)
Q Consensus       112 ~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~  191 (428)
                      .+++.+.+++ +.+|++.+|+|..+..+.+.+.+..... ......+.|............  ..+..............
T Consensus        65 ~a~n~~~~~a-~~~~v~~ld~D~~~~~~~~~~~~~~~~~-~~~~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  140 (202)
T cd06433          65 DAMNKGIALA-TGDIIGFLNSDDTLLPGALLAVVAAFAE-HPEVDVVYGDVLLVDENGRVI--GRRRPPPFLDKFLLYGM  140 (202)
T ss_pred             HHHHHHHHHc-CCCEEEEeCCCcccCchHHHHHHHHHHh-CCCccEEEeeeEEEcCCCCcc--cCCCCcchhhhHHhhcC
Confidence            4456666666 6899999999999999888888733321 123445555542211111110  01111111112223345


Q ss_pred             ccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeec
Q psy12347        192 HCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  241 (428)
Q Consensus       192 y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~  241 (428)
                      ++.|++.++++++++.+-.  .. ..+...+|..+ ..-+...|......
T Consensus       141 ~~~~~~~~~~~~~~~~~~~--f~-~~~~~~~D~~~-~~r~~~~g~~~~~~  186 (202)
T cd06433         141 PICHQATFFRRSLFEKYGG--FD-ESYRIAADYDL-LLRLLLAGKIFKYL  186 (202)
T ss_pred             cccCcceEEEHHHHHHhCC--Cc-hhhCchhhHHH-HHHHHHcCCceEec
Confidence            6678889999999988742  11 22334578887 55566667665443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=91.77  E-value=0.94  Score=40.82  Aligned_cols=127  Identities=13%  Similarity=0.052  Sum_probs=76.5

Q ss_pred             hHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCC---Cccc--Cc
Q psy12347        107 TYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRS---KWRV--SF  181 (428)
Q Consensus       107 t~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~---kw~v--s~  181 (428)
                      ..|+-.++.-+.. -.+.++++..|+|+.++.+-|.+.+.....   ++--+..++ ....+ .+...+   .-++  ..
T Consensus        16 N~Kv~nL~~~~~~-~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~---p~vglVt~~-~~~~~-~~~~~~~l~~~~~~~~~   89 (175)
T PF13506_consen   16 NPKVNNLAQGLEA-GAKYDYLVISDSDIRVPPDYLRELVAPLAD---PGVGLVTGL-PRGVP-ARGFWSRLEAAFFNFLP   89 (175)
T ss_pred             ChHHHHHHHHHHh-hCCCCEEEEECCCeeECHHHHHHHHHHHhC---CCCcEEEec-ccccC-CcCHHHHHHHHHHhHHH
Confidence            4566555555544 247999999999999999998888877632   122233333 11111 111000   0011  00


Q ss_pred             cccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        182 SEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       182 ~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      ..+....-.++|-|+++++.+++++++--- .. ....--||..+ |..+...|.+..-.+
T Consensus        90 ~~~~a~~~~~~~~G~~m~~rr~~L~~~GG~-~~-l~~~ladD~~l-~~~~~~~G~~v~~~~  147 (175)
T PF13506_consen   90 GVLQALGGAPFAWGGSMAFRREALEEIGGF-EA-LADYLADDYAL-GRRLRARGYRVVLSP  147 (175)
T ss_pred             HHHHHhcCCCceecceeeeEHHHHHHcccH-HH-HhhhhhHHHHH-HHHHHHCCCeEEEcc
Confidence            001111246889999999999999987211 11 22355899998 999999999877665

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=91.68  E-value=4.4  Score=38.04  Aligned_cols=188  Identities=11%  Similarity=0.061  Sum_probs=94.7

Q ss_pred             cEEEEEEcCCCCHHHHH---HHHHHhcc--cceEEEEecCCChhHHHHHHHHHhhCCC--EEEecccCcCCchhHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRR---LIRNTWGP--RVSLYFFIGETDPSNQTRLDIESETYHD--IVQGRFWDSYRNLTYKHTMV  113 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~---~IR~TW~~--~~~~~F~vG~~~~~~~~~l~~E~~~~~D--Il~~d~~D~y~nlt~K~~~~  113 (428)
                      .+-|+|++--....-..   .+++.-..  .+.++++-..+.....+.+++-.++|++  +......   .|.. | -.+
T Consensus        10 ~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~---~n~G-~-~~a   84 (243)
T PLN02726         10 KYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRP---GKLG-L-GTA   84 (243)
T ss_pred             eEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecC---CCCC-H-HHH
Confidence            56677766432222222   34443322  5677777665533334444444455543  2222211   1221 1 124


Q ss_pred             HHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcc-----cccCCCCc--ccCccccCC
Q psy12347        114 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPV-----LRTYRSKW--RVSFSEYRD  186 (428)
Q Consensus       114 l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~-----~R~~~~kw--~vs~~~y~~  186 (428)
                      ++...... +.+|++.+|.|..+.++.|.+++.....  ...+.++|.........     .|.-.++.  ++..... .
T Consensus        85 ~n~g~~~a-~g~~i~~lD~D~~~~~~~l~~l~~~~~~--~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~  160 (243)
T PLN02726         85 YIHGLKHA-SGDFVVIMDADLSHHPKYLPSFIKKQRE--TGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLL-W  160 (243)
T ss_pred             HHHHHHHc-CCCEEEEEcCCCCCCHHHHHHHHHHHHh--cCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHh-C
Confidence            44444443 5899999999999999888887765522  23455555431111110     11100000  0000011 1


Q ss_pred             CCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        187 HFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       187 ~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      ... ..++|++.++++++++.+...... . . ...|..+ .+.+...|.+....|
T Consensus       161 ~~~-~d~~g~~~~~rr~~~~~i~~~~~~-~-~-~~~~~el-~~~~~~~g~~i~~vp  211 (243)
T PLN02726        161 PGV-SDLTGSFRLYKRSALEDLVSSVVS-K-G-YVFQMEI-IVRASRKGYRIEEVP  211 (243)
T ss_pred             CCC-CcCCCcccceeHHHHHHHHhhccC-C-C-cEEehHH-HHHHHHcCCcEEEeC
Confidence            111 235777889999999999653332 2 2 2235555 666777888777665

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=91.15  E-value=6  Score=36.22  Aligned_cols=188  Identities=11%  Similarity=0.010  Sum_probs=91.9

Q ss_pred             EEEEEEcCCCCH-HHHHHH----HHHhcc-cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHH
Q psy12347         42 YLVLIHSAPYNY-ERRRLI----RNTWGP-RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFK  115 (428)
Q Consensus        42 lli~V~S~~~~~-~~R~~I----R~TW~~-~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~  115 (428)
                      +-|+|++.-... ..++.+    .+++.. .+.++++-..++......++.-..++ .+......   .|.-.|.- .+.
T Consensus         3 vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~---~~~~~~~~-~~n   77 (234)
T cd06421           3 VDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRP---DNRHAKAG-NLN   77 (234)
T ss_pred             eEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeC---CCCCCcHH-HHH
Confidence            345566544332 233333    234433 26777765544333333333322222 33322221   22222322 234


Q ss_pred             HHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEE-eecCCcc----cccCC--CCcccCccccC-CC
Q psy12347        116 WVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSI-VWEKSPV----LRTYR--SKWRVSFSEYR-DH  187 (428)
Q Consensus       116 w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~-~~~~~~~----~R~~~--~kw~vs~~~y~-~~  187 (428)
                      .+.+.. +.+|++.+|+|+++..+.|.+++.....  +..-...++. .......    .+...  ...+....... ..
T Consensus        78 ~~~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (234)
T cd06421          78 NALAHT-TGDFVAILDADHVPTPDFLRRTLGYFLD--DPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDR  154 (234)
T ss_pred             HHHHhC-CCCEEEEEccccCcCccHHHHHHHHHhc--CCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhh
Confidence            444443 6899999999999998888777766531  1221222222 1111110    11000  00000000000 01


Q ss_pred             CCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        188 FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       188 ~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      ....++.|++.++++++++++-.-    ......||..+ +.-+...|......+
T Consensus       155 ~~~~~~~g~~~~~r~~~~~~ig~~----~~~~~~eD~~l-~~r~~~~g~~i~~~~  204 (234)
T cd06421         155 WGAAFCCGSGAVVRREALDEIGGF----PTDSVTEDLAT-SLRLHAKGWRSVYVP  204 (234)
T ss_pred             cCCceecCceeeEeHHHHHHhCCC----CccceeccHHH-HHHHHHcCceEEEec
Confidence            124567899999999999887321    12344799998 877778887765444

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=91.01  E-value=10  Score=35.34  Aligned_cols=184  Identities=9%  Similarity=-0.009  Sum_probs=89.4

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc-----cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP-----RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFK  115 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~-----~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~  115 (428)
                      .+-|+|++.-....-...++.-..+     ...++++...++......+.+..++  .+......+   |. .|. .+++
T Consensus        30 ~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~---~~-g~~-~a~n  102 (251)
T cd06439          30 TVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPE---RR-GKA-AALN  102 (251)
T ss_pred             EEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCC---CC-ChH-HHHH
Confidence            6777777755554445555555554     2456555544433333333332222  343332222   21 232 3445


Q ss_pred             HHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcc-cccCCCCcccCc--cccC-CCCCcC
Q psy12347        116 WVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPV-LRTYRSKWRVSF--SEYR-DHFYPP  191 (428)
Q Consensus       116 w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~-~R~~~~kw~vs~--~~y~-~~~yP~  191 (428)
                      ...+.. +.+|++.+|+|+.+..+-|.+.+.....  ..-..+.|......... .+.....|....  ..+. ....+.
T Consensus       103 ~gi~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (251)
T cd06439         103 RALALA-TGEIVVFTDANALLDPDALRLLVRHFAD--PSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRAESRLGSTV  179 (251)
T ss_pred             HHHHHc-CCCEEEEEccccCcCHHHHHHHHHHhcC--CCccEEEeEEEecCCcccchhHHHHHHHHHHHHHHHHhcCCee
Confidence            555554 5699999999999997777777766532  12233333331111110 000000111000  0000 011233


Q ss_pred             ccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        192 HCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       192 y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      .+.|+++++.+++..      .. ......||..+ +..+...|......+
T Consensus       180 ~~~g~~~~~rr~~~~------~~-~~~~~~eD~~l-~~~~~~~G~~~~~~~  222 (251)
T cd06439         180 GANGAIYAIRRELFR------PL-PADTINDDFVL-PLRIARQGYRVVYEP  222 (251)
T ss_pred             eecchHHHhHHHHhc------CC-CcccchhHHHH-HHHHHHcCCeEEecc
Confidence            456666666666555      11 22344699988 777777787665554

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=90.22  E-value=19  Score=34.93  Aligned_cols=124  Identities=15%  Similarity=0.102  Sum_probs=65.5

Q ss_pred             HHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecC-C-cc--------ccc-----CCCCc
Q psy12347        113 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEK-S-PV--------LRT-----YRSKW  177 (428)
Q Consensus       113 ~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~-~-~~--------~R~-----~~~kw  177 (428)
                      +.+...+.. ..+|++..|+|+.+...-|.+++.....   .+..+.|+.+... . ..        .+.     ....|
T Consensus        74 a~N~g~~~A-~gd~i~fLD~D~~~~~~wL~~ll~~l~~---~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (299)
T cd02510          74 ARIAGARAA-TGDVLVFLDSHCEVNVGWLEPLLARIAE---NRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKW  149 (299)
T ss_pred             HHHHHHHHc-cCCEEEEEeCCcccCccHHHHHHHHHHh---CCCeEEEeeeccccCCCeeEecCCCceeEEecccceecc
Confidence            344444444 6899999999999987777777765532   2223444321110 0 00        000     00112


Q ss_pred             ccCccc-----cC-CCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        178 RVSFSE-----YR-DHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       178 ~vs~~~-----y~-~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      ......     .+ ....-++++|++.++++++...+-.--.. ......||+-+ .+=+...|-+....+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~-~~~~~~ED~Dl-~~R~~~~G~~i~~~p  218 (299)
T cd02510         150 LPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEG-MDIWGGENLEL-SFKVWQCGGSIEIVP  218 (299)
T ss_pred             ccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCc-ccccCchhHHH-HHHHHHcCCeEEEee
Confidence            111000     01 11233567899999999999887322122 22223699988 555556776654443

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=90.01  E-value=4.4  Score=35.77  Aligned_cols=136  Identities=14%  Similarity=0.038  Sum_probs=70.7

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  145 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L  145 (428)
                      .+.++.+-+.+.......++...+++..+.......   |.- | -.+++....++ ..+|++.+|+|.......|.+.+
T Consensus        29 ~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~---n~G-~-~~a~n~g~~~a-~~d~i~~~D~D~~~~~~~l~~l~  102 (181)
T cd04187          29 DYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSR---NFG-Q-QAALLAGLDHA-RGDAVITMDADLQDPPELIPEML  102 (181)
T ss_pred             CeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecC---CCC-c-HHHHHHHHHhc-CCCEEEEEeCCCCCCHHHHHHHH
Confidence            566666665553333444555555666565544433   221 2 23444444444 47999999999999877777766


Q ss_pred             HhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCcCccccceEEeCHHHHHHHHH
Q psy12347        146 TRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQ  210 (428)
Q Consensus       146 ~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~  210 (428)
                      ....   ...+..+|..........+...++.+...........-+...|+..++++++++.+..
T Consensus       103 ~~~~---~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i~~  164 (181)
T cd04187         103 AKWE---EGYDVVYGVRKNRKESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDALLL  164 (181)
T ss_pred             HHHh---CCCcEEEEEecCCcchHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHHHHh
Confidence            6542   2345555554211111111000111100000001112245567889999999998864

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=89.47  E-value=6.7  Score=36.05  Aligned_cols=98  Identities=16%  Similarity=0.102  Sum_probs=54.0

Q ss_pred             EEEEEcCCCC-HHHHHHHHHHhcc-cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhh
Q psy12347         43 LVLIHSAPYN-YERRRLIRNTWGP-RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYN  120 (428)
Q Consensus        43 li~V~S~~~~-~~~R~~IR~TW~~-~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~  120 (428)
                      -|+|++.-.. ......|+.-=.+ ...++++...++.+....+ ++...+..+....- +.    ..|..+ +......
T Consensus         3 sVvIp~~ne~~~~l~~~l~sl~~q~~~eiivvdd~s~d~~~~~l-~~~~~~~~~~v~~~-~~----~g~~~a-~n~g~~~   75 (235)
T cd06434           3 TVIIPVYDEDPDVFRECLRSILRQKPLEIIVVTDGDDEPYLSIL-SQTVKYGGIFVITV-PH----PGKRRA-LAEGIRH   75 (235)
T ss_pred             EEEEeecCCChHHHHHHHHHHHhCCCCEEEEEeCCCChHHHHHH-HhhccCCcEEEEec-CC----CChHHH-HHHHHHH
Confidence            3555554333 2233333322222 5666666555533333333 34556666665542 11    223322 2333333


Q ss_pred             CCCccEEEEeCCceEecHHHHHHHHHhc
Q psy12347        121 CPHVKYVFKLDDDVFMNVIQLDELLTRT  148 (428)
Q Consensus       121 c~~~~~vlk~DDD~~vn~~~L~~~L~~~  148 (428)
                      . ..+|++.+|+|+.+..+.|.+.+...
T Consensus        76 a-~~d~v~~lD~D~~~~~~~l~~l~~~~  102 (235)
T cd06434          76 V-TTDIVVLLDSDTVWPPNALPEMLKPF  102 (235)
T ss_pred             h-CCCEEEEECCCceeChhHHHHHHHhc
Confidence            2 78999999999999999988888766

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=88.61  E-value=16  Score=33.58  Aligned_cols=119  Identities=10%  Similarity=0.024  Sum_probs=68.2

Q ss_pred             HHHHHHHhhCC-CccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccC------cccc
Q psy12347        112 MVFKWVVYNCP-HVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVS------FSEY  184 (428)
Q Consensus       112 ~~l~w~~~~c~-~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs------~~~y  184 (428)
                      .++.++.+.+. +.+|++..|+|+.+..+.|.+++.....   ..--++++.     ...++....++..      ...+
T Consensus        72 ~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~---~~~~~v~~~-----~~~~~~~~~~~~~~~~~~~~~~~  143 (236)
T cd06435          72 GALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDD---PRVGFVQAP-----QDYRDGEESLFKRMCYAEYKGFF  143 (236)
T ss_pred             HHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcC---CCeeEEecC-----ccccCCCccHHHHHHhHHHHHHH
Confidence            35677777664 4799999999999999888888776521   111122221     0011111111100      0000


Q ss_pred             -----CCCCC-cCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecCC
Q psy12347        185 -----RDHFY-PPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSW  243 (428)
Q Consensus       185 -----~~~~y-P~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~~  243 (428)
                           ..... -.+++|++.+++++++..+--   . -+.+..||+-+ +.=+...|....-.+.
T Consensus       144 ~~~~~~~~~~~~~~~~g~~~~~rr~~~~~iGg---f-~~~~~~eD~dl-~~r~~~~G~~~~~~~~  203 (236)
T cd06435         144 DIGMVSRNERNAIIQHGTMCLIRRSALDDVGG---W-DEWCITEDSEL-GLRMHEAGYIGVYVAQ  203 (236)
T ss_pred             HHHhccccccCceEEecceEEEEHHHHHHhCC---C-CCccccchHHH-HHHHHHCCcEEEEcch
Confidence                 00000 125678889999999988732   1 11235799998 7777788887666553

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=88.28  E-value=16  Score=34.09  Aligned_cols=123  Identities=11%  Similarity=0.015  Sum_probs=68.6

Q ss_pred             HHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEE-EEEeecCCcccccCCCCcccC------cccc
Q psy12347        112 MVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLM-CSIVWEKSPVLRTYRSKWRVS------FSEY  184 (428)
Q Consensus       112 ~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~-g~~~~~~~~~~R~~~~kw~vs------~~~y  184 (428)
                      .+++...++. +.+|++.+|+|+.+..+.|.+.+.....  ...+..+ |+.+...... .....+.+..      ....
T Consensus        74 ~a~n~g~~~a-~gd~i~~~DaD~~~~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  149 (241)
T cd06427          74 KACNYALAFA-RGEYVVIYDAEDAPDPDQLKKAVAAFAR--LDDKLACVQAPLNYYNAR-ENWLTRMFALEYAAWFDYLL  149 (241)
T ss_pred             HHHHHHHHhc-CCCEEEEEcCCCCCChHHHHHHHHHHHh--cCCCEEEEeCceEeeCCC-ccHHHHHHHHHHHHHHHHHH
Confidence            4566666664 6799999999999999999888876631  1123222 2221111100 0000011000      0000


Q ss_pred             C---CCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecCC
Q psy12347        185 R---DHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSW  243 (428)
Q Consensus       185 ~---~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~~  243 (428)
                      +   ....+..++|++.++++++++.+-.   . .+....||..+ ++-+...|.+....+.
T Consensus       150 ~~~~~~~~~~~~~g~~~~~rr~~~~~vgg---~-~~~~~~eD~~l-~~rl~~~G~r~~~~~~  206 (241)
T cd06427         150 PGLARLGLPIPLGGTSNHFRTDVLRELGG---W-DPFNVTEDADL-GLRLARAGYRTGVLNS  206 (241)
T ss_pred             HHHHhcCCeeecCCchHHhhHHHHHHcCC---C-CcccchhhHHH-HHHHHHCCceEEEecc
Confidence            1   1123345678888889998887632   1 12234699998 7777777877666654

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PRK11204 N-glycosyltransferase; Provisional

Probab=88.24  E-value=22  Score=36.36  Aligned_cols=183  Identities=10%  Similarity=0.020  Sum_probs=97.5

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc---cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP---RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV  117 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~---~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~  117 (428)
                      .+-|+|++.-+...-++.++.--.+   ...++.+-..++++..+.+++..+++..+...+..   .|.. | -.+++..
T Consensus        55 ~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~---~n~G-k-a~aln~g  129 (420)
T PRK11204         55 GVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLA---ENQG-K-ANALNTG  129 (420)
T ss_pred             CEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcC---CCCC-H-HHHHHHH
Confidence            6777787755543334433332222   34444333333444455566666666666555433   2332 4 3445666


Q ss_pred             HhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccC--ccccCC---------
Q psy12347        118 VYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVS--FSEYRD---------  186 (428)
Q Consensus       118 ~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs--~~~y~~---------  186 (428)
                      .+++ +.+|++..|+|+.+..+.|.+.+.....  .++-...++.     +..++.. .|...  ..+|..         
T Consensus       130 ~~~a-~~d~i~~lDaD~~~~~d~L~~l~~~~~~--~~~v~~v~g~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  200 (420)
T PRK11204        130 AAAA-RSEYLVCIDGDALLDPDAAAYMVEHFLH--NPRVGAVTGN-----PRIRNRS-TLLGRIQVGEFSSIIGLIKRAQ  200 (420)
T ss_pred             HHHc-CCCEEEEECCCCCCChhHHHHHHHHHHh--CCCeEEEECC-----ceeccch-hHHHHHHHHHHHHhhhHHHHHH
Confidence            6665 7899999999999999888877766521  1111122221     1111111 01000  000100         


Q ss_pred             CC--CcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        187 HF--YPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       187 ~~--yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      ..  .+..++|.+.++.+++++++--   - .+..-.||+.+ +.-+...|.+..-.+
T Consensus       201 ~~~~~~~~~~G~~~~~rr~~l~~vgg---~-~~~~~~ED~~l-~~rl~~~G~~i~~~p  253 (420)
T PRK11204        201 RVYGRVFTVSGVITAFRKSALHEVGY---W-STDMITEDIDI-SWKLQLRGWDIRYEP  253 (420)
T ss_pred             HHhCCceEecceeeeeeHHHHHHhCC---C-CCCcccchHHH-HHHHHHcCCeEEecc
Confidence            01  1223478888999998877521   1 12234699998 887888888765554

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=87.92  E-value=1  Score=42.85  Aligned_cols=51  Identities=14%  Similarity=0.042  Sum_probs=39.7

Q ss_pred             ccceEEeCHHHHHHHHHHhhc---cCCCCCcchhhhHHHHHHhcCCceeecCCCC
Q psy12347        194 HGNILLYSPDVVFKLYQHLQT---DQEYFWVDDVFITGIVFSKLNLTHAKFSWWP  245 (428)
Q Consensus       194 ~G~~YvlS~~~v~~l~~~~~~---~~~~~~~eDv~itG~~~~~~~i~~~~~~~~~  245 (428)
                      +|+|+++|..+++.|.+....   ..+.+.--|-.+ ..|+..+|+..+..++|+
T Consensus        12 GGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i-~~C~~~lgv~LT~e~g~h   65 (255)
T PF04646_consen   12 GGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRI-QACIAELGVPLTKEPGFH   65 (255)
T ss_pred             cCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHH-HHHHHHhCCCceecCCce
Confidence            899999999999999876332   234455566667 888889999999888775

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=87.76  E-value=29  Score=33.91  Aligned_cols=191  Identities=12%  Similarity=0.087  Sum_probs=101.8

Q ss_pred             EEEEEEcCCCCHHHHHHHHHHhcc--cceEEEEecCC-ChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHH
Q psy12347         42 YLVLIHSAPYNYERRRLIRNTWGP--RVSLYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVV  118 (428)
Q Consensus        42 lli~V~S~~~~~~~R~~IR~TW~~--~~~~~F~vG~~-~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~  118 (428)
                      +-++|.|--.-....+.++..=.+  ....+.++-.. .....+.+.+..  +.++..+...++.-= ..=.-.+++.+.
T Consensus         5 i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~--~~~v~~i~~~~NlG~-agg~n~g~~~a~   81 (305)
T COG1216           5 ISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARF--FPNVRLIENGENLGF-AGGFNRGIKYAL   81 (305)
T ss_pred             eEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhc--CCcEEEEEcCCCccc-hhhhhHHHHHHh
Confidence            345555544444555666655555  22222233333 222223333222  678876665554320 001114666665


Q ss_pred             hhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCC-c--cc-cc-----CCCCcccCc-cccCC--
Q psy12347        119 YNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKS-P--VL-RT-----YRSKWRVSF-SEYRD--  186 (428)
Q Consensus       119 ~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~-~--~~-R~-----~~~kw~vs~-~~y~~--  186 (428)
                      ..-  .+|++..++|+.+..+-|.+++.....  .....+.|..+.... +  .. +.     ....|..+. .+...  
T Consensus        82 ~~~--~~~~l~LN~D~~~~~~~l~~ll~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (305)
T COG1216          82 AKG--DDYVLLLNPDTVVEPDLLEELLKAAEE--DPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDL  157 (305)
T ss_pred             cCC--CcEEEEEcCCeeeChhHHHHHHHHHHh--CCCCeEeeeeEecCCCCcchheeccccccccccceecccccccccc
Confidence            542  229999999999999999988877642  223334444422111 1  11 11     011222221 11111  


Q ss_pred             ---CCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        187 ---HFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       187 ---~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                         ...-.+++|++.++++++++++-- ... .-+...||+-+ +.=+.++|.+..-.+
T Consensus       158 ~~~~~~~~~~~G~~~li~~~~~~~vG~-~de-~~F~y~eD~D~-~~R~~~~G~~i~~~p  213 (305)
T COG1216         158 SSYLEVVASLSGACLLIRREAFEKVGG-FDE-RFFIYYEDVDL-CLRARKAGYKIYYVP  213 (305)
T ss_pred             cchhhhhhhcceeeeEEcHHHHHHhCC-CCc-ccceeehHHHH-HHHHHHcCCeEEEee
Confidence               111125789999999999999854 222 33568999998 777778888655444

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=87.60  E-value=23  Score=32.52  Aligned_cols=144  Identities=10%  Similarity=0.003  Sum_probs=70.9

Q ss_pred             CCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHH--HhccCCCCCcce-EEEEEeecCC
Q psy12347         91 YHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL--TRTLSPHGTRNL-LMCSIVWEKS  167 (428)
Q Consensus        91 ~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L--~~~~~~~~~~~~-~~g~~~~~~~  167 (428)
                      ...+.......+. ....=.-.+++.+...  +++|++..|+|+.+..+.|.+.+  .....  ..... .+|..+....
T Consensus        46 ~~~i~~i~~~~n~-G~~~a~N~g~~~a~~~--~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~  120 (237)
T cd02526          46 SEKIELIHLGENL-GIAKALNIGIKAALEN--GADYVLLFDQDSVPPPDMVEKLLAYKILSD--KNSNIGAVGPRIIDRR  120 (237)
T ss_pred             CCcEEEEECCCce-ehHHhhhHHHHHHHhC--CCCEEEEECCCCCcCHhHHHHHHHHHHhhc--cCCCeEEEeeeEEcCC
Confidence            3445444433321 1233333455555432  58999999999999988888875  22211  12222 2333212111


Q ss_pred             cccccC---CCCcccCccccCCC--CCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        168 PVLRTY---RSKWRVSFSEYRDH--FYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       168 ~~~R~~---~~kw~vs~~~y~~~--~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      ......   ...|..........  .-..++.|+|.++++++++.+---...  -....||+.+ ++-+...|......+
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~--~~~~~eD~d~-~~r~~~~G~~~~~~~  197 (237)
T cd02526         121 TGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKVGGFDED--LFIDYVDTEW-CLRARSKGYKIYVVP  197 (237)
T ss_pred             CCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHHhCCCCHH--HcCccchHHH-HHHHHHcCCcEEEEc
Confidence            111000   00111100011111  112355677788999888876321111  1245689998 666667887765554

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

Probab=84.30  E-value=21  Score=35.38  Aligned_cols=134  Identities=10%  Similarity=0.068  Sum_probs=70.0

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCCC-EEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYHD-IVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL  144 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~D-Il~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~  144 (428)
                      ...++++-..+.....+.+++-.+++++ ++......++ .   |. .+++-..+++ +.+|++.+|.|.-.+++.+.++
T Consensus        38 ~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n~-G---~~-~A~~~G~~~A-~gd~vv~~DaD~q~~p~~i~~l  111 (325)
T PRK10714         38 EYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRNY-G---QH-SAIMAGFSHV-TGDLIITLDADLQNPPEEIPRL  111 (325)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCCC-C---HH-HHHHHHHHhC-CCCEEEEECCCCCCCHHHHHHH
Confidence            6778888766622223333333344444 4433333322 1   21 1233333444 6899999999999999999888


Q ss_pred             HHhccCCCCCcceEEEEEeec-CCcccccCCCCcccC-ccccCCCCCcCccccceEEeCHHHHHHHHH
Q psy12347        145 LTRTLSPHGTRNLLMCSIVWE-KSPVLRTYRSKWRVS-FSEYRDHFYPPHCHGNILLYSPDVVFKLYQ  210 (428)
Q Consensus       145 L~~~~~~~~~~~~~~g~~~~~-~~~~~R~~~~kw~vs-~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~  210 (428)
                      ++...   ...+.. |+.... ..+..|...++.+-. -....+..++...+| .-++++++++.+..
T Consensus       112 ~~~~~---~~~DvV-~~~r~~~~~~~~r~~~s~~~~~l~~~~~g~~~~d~~~g-fr~~~r~~~~~l~~  174 (325)
T PRK10714        112 VAKAD---EGYDVV-GTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCM-LRAYRRHIVDAMLH  174 (325)
T ss_pred             HHHHH---hhCCEE-EEEEcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCcC-eEEEcHHHHHHHHH
Confidence            88763   123444 443121 122333222221110 011123445565555 34899999999854

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=82.06  E-value=36  Score=30.17  Aligned_cols=185  Identities=12%  Similarity=0.045  Sum_probs=87.1

Q ss_pred             EEEEEEcCCCC-HHHHHHHHHHhcc---cceEEEEecCC-ChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHH
Q psy12347         42 YLVLIHSAPYN-YERRRLIRNTWGP---RVSLYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKW  116 (428)
Q Consensus        42 lli~V~S~~~~-~~~R~~IR~TW~~---~~~~~F~vG~~-~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w  116 (428)
                      +-|+|.+--.. ..-...++.-=.+   .+.++.+-+.+ ++.....+....+.+.-+.... ...-.+.    -.+++.
T Consensus         3 vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~-~~~~~g~----~~a~n~   77 (202)
T cd04184           3 ISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVF-REENGGI----SAATNS   77 (202)
T ss_pred             EEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEE-cccCCCH----HHHHHH
Confidence            34555554444 3333333333323   45666665554 4333333333334433333222 1211122    223444


Q ss_pred             HHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecC-CcccccCCCCcccCccccCCCC-CcCccc
Q psy12347        117 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEK-SPVLRTYRSKWRVSFSEYRDHF-YPPHCH  194 (428)
Q Consensus       117 ~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~-~~~~R~~~~kw~vs~~~y~~~~-yP~y~~  194 (428)
                      ..+.. ..+|++..|+|..+..+.|.+.+..... ......++|...... ......   .++.+  .+.... +..-+.
T Consensus        78 g~~~a-~~d~i~~ld~D~~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~  150 (202)
T cd04184          78 ALELA-TGEFVALLDHDDELAPHALYEVVKALNE-HPDADLIYSDEDKIDEGGKRSE---PFFKP--DWSPDLLLSQNYI  150 (202)
T ss_pred             HHHhh-cCCEEEEECCCCcCChHHHHHHHHHHHh-CCCCCEEEccHHhccCCCCEec---cccCC--CCCHHHhhhcCCc
Confidence            44444 6899999999999998888877766521 022334444321100 000000   11110  111111 111123


Q ss_pred             cceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        195 GNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       195 G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      |++-+++++++.++--  .. ..+...||..+ +.=+...|.+....+
T Consensus       151 ~~~~~~~r~~~~~igg--f~-~~~~~~eD~~l-~~rl~~~g~~~~~~~  194 (202)
T cd04184         151 GHLLVYRRSLVRQVGG--FR-EGFEGAQDYDL-VLRVSEHTDRIAHIP  194 (202)
T ss_pred             cceEeEEHHHHHHhCC--CC-cCcccchhHHH-HHHHHhccceEEEcc
Confidence            4555778888777632  11 23345689888 665566677766554

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=81.35  E-value=9  Score=33.58  Aligned_cols=135  Identities=12%  Similarity=0.084  Sum_probs=69.5

Q ss_pred             cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHH
Q psy12347         66 RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  145 (428)
Q Consensus        66 ~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L  145 (428)
                      ...++.+-..+.......+....+++..+.......+.   . | -.++....+.. ..+|++.+|+|..+....|.+++
T Consensus        28 ~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~---G-~-~~a~n~g~~~a-~gd~i~~lD~D~~~~~~~l~~l~  101 (185)
T cd04179          28 DYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNF---G-K-GAAVRAGFKAA-RGDIVVTMDADLQHPPEDIPKLL  101 (185)
T ss_pred             CEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCC---C-c-cHHHHHHHHHh-cCCEEEEEeCCCCCCHHHHHHHH
Confidence            45555554444334455555556666665444443332   1 1 13344444443 45999999999999988888888


Q ss_pred             HhccCCCCCcceEEEEEeecCCc----ccccCCCCcccCcc-ccCCCCCcCccccceEEeCHHHHHHHH
Q psy12347        146 TRTLSPHGTRNLLMCSIVWEKSP----VLRTYRSKWRVSFS-EYRDHFYPPHCHGNILLYSPDVVFKLY  209 (428)
Q Consensus       146 ~~~~~~~~~~~~~~g~~~~~~~~----~~R~~~~kw~vs~~-~y~~~~yP~y~~G~~YvlS~~~v~~l~  209 (428)
                      .....  ...+.+.|........    ..+.. ..+..... ..-...-.....|+.+++++++++.+-
T Consensus       102 ~~~~~--~~~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i~  167 (185)
T cd04179         102 EKLLE--GGADVVIGSRFVRGGGAGMPLLRRL-GSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEALL  167 (185)
T ss_pred             HHHhc--cCCcEEEEEeecCCCcccchHHHHH-HHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHHH
Confidence            76321  2455666654222211    11100 00000000 000111123346777899999999985

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=80.78  E-value=40  Score=29.88  Aligned_cols=76  Identities=9%  Similarity=0.008  Sum_probs=42.9

Q ss_pred             cceEEEEecCC-ChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHHHhhCCCccEEEEeCCceEecHHHHHHH
Q psy12347         66 RVSLYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL  144 (428)
Q Consensus        66 ~~~~~F~vG~~-~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~  144 (428)
                      ...++++.-.+ +......+++-.+++. +.......+   .- + -.+++.+...+ +.+|++..|+|..+....|...
T Consensus        29 ~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n---~G-~-~~a~N~g~~~a-~gd~i~~lD~Dd~~~~~~l~~~  101 (201)
T cd04195          29 PDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKN---RG-L-GKALNEGLKHC-TYDWVARMDTDDISLPDRFEKQ  101 (201)
T ss_pred             CcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCcc---cc-H-HHHHHHHHHhc-CCCEEEEeCCccccCcHHHHHH
Confidence            34555543222 4344444444445555 443333222   11 1 12345555555 6899999999999998888887


Q ss_pred             HHhc
Q psy12347        145 LTRT  148 (428)
Q Consensus       145 L~~~  148 (428)
                      +...
T Consensus       102 ~~~~  105 (201)
T cd04195         102 LDFI  105 (201)
T ss_pred             HHHH
Confidence            7764

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	428
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	4e-07

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 50.5 bits (120), Expect = 4e-07
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 24/198 (12%)

Query: 51  YNYERRRLIRNTWGPRVS--LYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTY 108
           ++  R  L+ +TW  R+    + F    D   Q RL      +  + Q     S+  L+ 
Sbjct: 25  FHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQERLGP----HLVVTQCSAEHSHPALSC 80

Query: 109 KHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSP 168
           K  M  ++  +    +++   +DDD ++N     + L + L        +         P
Sbjct: 81  K--MAAEFDAFLVSGLRWFCHVDDDNYVNP----KALLQLLKTFPQDRDVYVGKPSLNRP 134

Query: 169 VLRTYRSKWRVSFSEYRDHFYPPHCHGNILLYSPDVVFKLYQH------LQTDQEYFWVD 222
           +  +       S    +   +     G     +  +  K+         + T       D
Sbjct: 135 IHASELQ----SKQRTKLVRFWFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPD 190

Query: 223 DVFITGIVFSKLN--LTH 238
           D  +  I+  KL   L  
Sbjct: 191 DCTVGYIIECKLGGRLQP 208

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	428
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.92
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.33
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	95.94
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	93.43
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	92.79
3bcv_A	240	Putative glycosyltransferase protein; protein stru	90.06
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	90.03
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	89.79
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	85.95
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	82.86

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.92  E-value=2.1e-24  Score=208.40  Aligned_cols=196  Identities=16%  Similarity=0.119  Sum_probs=133.8

Q ss_pred             CCCCCcEEEEEEcCCCCH-HHHHHHHHHhcc--cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccC--cCCchhHHH
Q psy12347         36 PCLDTVYLVLIHSAPYNY-ERRRLIRNTWGP--RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWD--SYRNLTYKH  110 (428)
Q Consensus        36 ~C~~~~lli~V~S~~~~~-~~R~~IR~TW~~--~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D--~y~nlt~K~  110 (428)
                      .|....++|+|+|++++. +||.+||+||++  +..++|+....++...    ..  ..+++++.++.+  ++.+++.|+
T Consensus         9 ~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~l~----~~--~~~~~~~~~~~~~~~~~~l~~K~   82 (280)
T 2j0a_A            9 ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQ----ER--LGPHLVVTQCSAEHSHPALSCKM   82 (280)
T ss_dssp             CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHHHH----HH--HGGGEEECCC-------CCCHHH
T ss_pred             CCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCccccc----cc--ccccceeccccccccccchHHHH
Confidence            455559999999999855 577999999999  3334434443344332    11  245788887754  678999999


Q ss_pred             HHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcccccCCCCcccCccccCCCCCc
Q psy12347        111 TMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPVLRTYRSKWRVSFSEYRDHFYP  190 (428)
Q Consensus       111 ~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~~R~~~~kw~vs~~~y~~~~yP  190 (428)
                      ...+.+...  ++++|++|+||||||++++|+++|...+   ...+.|+|.. ... .++|.   +++++...++...|+
T Consensus        83 ~~~~~~~l~--~~~~Wf~~~DDDtyv~~~nL~~~L~~~d---~~~~~YiG~~-~~~-~~~~~---~~~~~~~~~~~~~~~  152 (280)
T 2j0a_A           83 AAEFDAFLV--SGLRWFCHVDDDNYVNPKALLQLLKTFP---QDRDVYVGKP-SLN-RPIHA---SELQSKQRTKLVRFW  152 (280)
T ss_dssp             HHHHHHHHH--HTCSEEEEEETTEEECHHHHHHHHTTSC---TTSCCEEECE-EC-----------------------CC
T ss_pred             HHHHHHHhC--CCCcEEEEeCCCcEEcHHHHHHHHHhCC---CCCCEEEEEe-ccC-ccccc---cccCccccccccccC
Confidence            999987643  4899999999999999999999999884   3667888887 433 33332   445554444445565


Q ss_pred             Ccc-ccceEEeCHHHHHHHHHHhhccC-------CCCCcchhhhHHHHHH-hcCCceeecCCCCCCCCc
Q psy12347        191 PHC-HGNILLYSPDVVFKLYQHLQTDQ-------EYFWVDDVFITGIVFS-KLNLTHAKFSWWPGHDEP  250 (428)
Q Consensus       191 ~y~-~G~~YvlS~~~v~~l~~~~~~~~-------~~~~~eDv~itG~~~~-~~~i~~~~~~~~~~~~~~  250 (428)
                       || +|+||+||++++++|+..+.. .       .....||+++ |+|++ ++||.+++.++|+.+...
T Consensus       153 -y~~GGaG~vlSr~~l~~l~~~~~~-~~~~~~~~~~~~~dD~~l-G~Cl~~~lGV~~~~~~~Fh~~~~~  218 (280)
T 2j0a_A          153 -FATGGAGFCINRQLALKMVPWASG-SHFVDTSALIRLPDDCTV-GYIIECKLGGRLQPSPLFHSHLET  218 (280)
T ss_dssp             -EECGGGCEEEEHHHHHHHHHHHTT-CTTSCCTTTTTSCHHHHH-HHHHHHTTCCCEEECTTCCCSSSC
T ss_pred             -cccCCCEEEECHHHHHHHHHhhcc-cccccccccCCCCccHHH-HHHHHhcCCCCceecccccCCCch
Confidence             55 678999999999999986544 3       2345799999 99999 999999999999866543

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.33  E-value=2.3e-12  Score=123.99  Aligned_cols=103  Identities=19%  Similarity=0.241  Sum_probs=76.0

Q ss_pred             CCCceEEEEEECCCC-ChHHHHHHHHHhhccce-EEE-EEccCCcchhhhhHhhhhcCCCeEEeeecc--CCCChHHHHH
Q psy12347        317 CLDTVYLVLIHSAPY-NYDKRRLIRNTWGTRVS-VYF-FIGETDPSNQTRLDIESETYHDIVQGRFWD--SYRNLTYKHT  391 (428)
Q Consensus       317 c~~~~~li~V~S~~~-~~~~R~~iR~TW~~~~~-~~F-~~g~~~~~~~~~l~~E~~~~~Dii~~~~~d--~y~nlt~K~~  391 (428)
                      |....++++|+|+++ +.+||++||+|||++.. .+| +++..+...+.    .  ..+++++.++.+  ++.+++.|+.
T Consensus        10 ~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~l~~----~--~~~~~~~~~~~~~~~~~~l~~K~~   83 (280)
T 2j0a_A           10 LQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQE----R--LGPHLVVTQCSAEHSHPALSCKMA   83 (280)
T ss_dssp             CCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHHHHH----H--HGGGEEECCC-------CCCHHHH
T ss_pred             CCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCcccccc----c--ccccceeccccccccccchHHHHH
Confidence            555668899999998 67788999999998753 344 44444433322    1  245788877754  6778999999


Q ss_pred             HHHHHHHHhCCCccEEEEcCCceEeeHHHHHHHHhh
Q psy12347        392 MVFKWVVYNCPHVKYVLKLDDDVFMNVIQLDELLTR  427 (428)
Q Consensus       392 ~~l~w~~~~c~~~~~~~k~DDD~~v~~~~l~~~L~~  427 (428)
                      ..+++...  ++++|++|+|||+||++++|+++|++
T Consensus        84 ~~~~~~l~--~~~~Wf~~~DDDtyv~~~nL~~~L~~  117 (280)
T 2j0a_A           84 AEFDAFLV--SGLRWFCHVDDDNYVNPKALLQLLKT  117 (280)
T ss_dssp             HHHHHHHH--HTCSEEEEEETTEEECHHHHHHHHTT
T ss_pred             HHHHHHhC--CCCcEEEEeCCCcEEcHHHHHHHHHh
Confidence            99997643  58999999999999999999999974

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=95.94  E-value=2  Score=44.85  Aligned_cols=190  Identities=12%  Similarity=0.034  Sum_probs=95.0

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc----cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP----RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKW  116 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~----~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w  116 (428)
                      .+-|+|.+.-.....+..++.--.+    ...++.+-..+.... ..+.++......+......+.-..    .-.+++.
T Consensus        94 ~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t-~~~~~~~~~~~~i~~i~~~~~~~g----~~~a~N~  168 (625)
T 2z86_A           94 GLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENI-EEIVREFESLLNIKYVRQKDYGYQ----LCAVRNL  168 (625)
T ss_dssp             CEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCH-HHHHHTTTTTSCEEEEEECCCSCC----HHHHHHH
T ss_pred             cEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhH-HHHHHHhhhcCCeEEEEeCCCCcc----hhHHHHH
Confidence            5667777754322233333322222    456666654442222 333333333334544432211111    2234455


Q ss_pred             HHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcc------------ccc------------
Q psy12347        117 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPV------------LRT------------  172 (428)
Q Consensus       117 ~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~------------~R~------------  172 (428)
                      +.+.+ ..+|++.+|+|..+....|...+.....  .....++|.........            .+.            
T Consensus       169 g~~~a-~g~~v~~lD~D~~~~~~~l~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (625)
T 2z86_A          169 GLRAA-KYNYVAILDCDMAPNPLWVQSYMELLAV--DDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG  245 (625)
T ss_dssp             HHHHC-CSSEEEEECTTEEECTTHHHHHHHHHHH--CTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred             HHHhC-CcCEEEEECCCCCCCHHHHHHHHHHHhc--CCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhh
Confidence            55555 6899999999999998887777665421  12334444432211110            000            


Q ss_pred             -----CCCCcccCc----cccC-CCCCcCccccceEEeCHHHHHHHHHHhhccCCCCC--cchhhhHHHHHHhcCCceee
Q psy12347        173 -----YRSKWRVSF----SEYR-DHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFW--VDDVFITGIVFSKLNLTHAK  240 (428)
Q Consensus       173 -----~~~kw~vs~----~~y~-~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~--~eDv~itG~~~~~~~i~~~~  240 (428)
                           ....|....    .... ...-..++.|++.+++++++..+--  .. ..++.  .||..+ +.=+...|.....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGg--fd-e~~~~~g~ED~dl-~~Rl~~~G~~i~~  321 (625)
T 2z86_A          246 KVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGW--FD-EEFTHWGGEDNEF-GYRLYREGCYFRS  321 (625)
T ss_dssp             ------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCC--CC-TTCSSCCCHHHHH-HHHHHHTTCEEEE
T ss_pred             hhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCC--Cc-cccccCCcchhhh-hhhHHhCCceEEE
Confidence                 000111000    0000 1111135789999999999988721  11 23332  799998 7777788877655


Q ss_pred             cC
Q psy12347        241 FS  242 (428)
Q Consensus       241 ~~  242 (428)
                      .+
T Consensus       322 ~p  323 (625)
T 2z86_A          322 VE  323 (625)
T ss_dssp             CG
T ss_pred             cc
Confidence            54

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=93.43  E-value=2.7  Score=37.76  Aligned_cols=182  Identities=8%  Similarity=0.009  Sum_probs=94.3

Q ss_pred             EEEEEEcCCCCHHHHHHHHHHhcc---cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcC-----CchhHHHHHH
Q psy12347         42 YLVLIHSAPYNYERRRLIRNTWGP---RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSY-----RNLTYKHTMV  113 (428)
Q Consensus        42 lli~V~S~~~~~~~R~~IR~TW~~---~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y-----~nlt~K~~~~  113 (428)
                      +-|+|++.-.....++.|+.--.+   .+.++.+-..+.... ..+.++...+..|........-     .|.  -.-.+
T Consensus         3 vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t-~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~--G~~~a   79 (255)
T 1qg8_A            3 VSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEET-LNVIRPFLNDNRVRFYQSDISGVKERTEKT--RYAAL   79 (255)
T ss_dssp             EEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHH-HHHHGGGGGSTTEEEEECCCCSHHHHHSSC--HHHHH
T ss_pred             EEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchH-HHHHHHHhhcCCEEEEeccccccccccccc--CHHHH
Confidence            445666643333333343333333   566666665553333 3344444445566544332100     232  23445


Q ss_pred             HHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeec--CC--cccccCCCCcccCccccCCCCC
Q psy12347        114 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWE--KS--PVLRTYRSKWRVSFSEYRDHFY  189 (428)
Q Consensus       114 l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~--~~--~~~R~~~~kw~vs~~~y~~~~y  189 (428)
                      ++...+++ +.+|++.+|+|.++..+.|...+..... .+....+.|.....  +.  .+..    .+..+..... ...
T Consensus        80 ~N~gi~~a-~g~~i~~lD~Dd~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~  152 (255)
T 1qg8_A           80 INQAIEMA-EGEYITYATDDNIYMPDRLLKMVRELDT-HPEKAVIYSASKTYHLNENRDIVK----ETVRPAAQVT-WNA  152 (255)
T ss_dssp             HHHHHHHC-CCSEEEEEETTEEECTTHHHHHHHHHHH-CTTCCEEEEEEEEEEEC---CEEE----EEEECCCSCB-SCC
T ss_pred             HHHHHHHc-CCCEEEEeCCCCccChHHHHHHHHHHHh-CCCceEEEeceEEEEeCCCCcchh----hccCchHHHH-Hhh
Confidence            66666666 7899999999999998887776665421 01234444443211  11  1111    1111111111 133


Q ss_pred             cCccccceEEeCHHHHHHHHHHh-----hccCCCCCcchhhhHHHHHHhcC
Q psy12347        190 PPHCHGNILLYSPDVVFKLYQHL-----QTDQEYFWVDDVFITGIVFSKLN  235 (428)
Q Consensus       190 P~y~~G~~YvlS~~~v~~l~~~~-----~~~~~~~~~eDv~itG~~~~~~~  235 (428)
                      ..++.|++.++.++++.++-...     .. ..+...||..+ +.-+...|
T Consensus       153 ~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~-~~~~~~eD~~~-~~r~~~~g  201 (255)
T 1qg8_A          153 PCAIDHCSVMHRYSVLEKVKEKFGSYWDES-PAFYRIGDARF-FWRVNHFY  201 (255)
T ss_dssp             TTTSCGGGEEEETHHHHHHHHHHSSSSCCC-GGGSTTHHHHH-HHHHTTTC
T ss_pred             cCCCccceEEEEHHHHHhhcccccccccCC-cccchHHHHHH-HHHHHHhC
Confidence            45678899999999999875222     01 23456799987 44444434

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=92.79  E-value=3  Score=41.79  Aligned_cols=191  Identities=12%  Similarity=0.023  Sum_probs=101.4

Q ss_pred             cEEEEEEcCCCC-HHHHHHHH----HHhcc-cceEEEEecCC-ChhHHHHHHHHHhhCC-CEEEecccCcCCchhHHHHH
Q psy12347         41 VYLVLIHSAPYN-YERRRLIR----NTWGP-RVSLYFFIGET-DPSNQTRLDIESETYH-DIVQGRFWDSYRNLTYKHTM  112 (428)
Q Consensus        41 ~lli~V~S~~~~-~~~R~~IR----~TW~~-~~~~~F~vG~~-~~~~~~~l~~E~~~~~-DIl~~d~~D~y~nlt~K~~~  112 (428)
                      .+-|+|.+.-.. ...+..|+    +|... ...++.|-..+ ++...+.+++-.+.+. .|..+...++.   -  ...
T Consensus        30 ~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~---G--~~~  104 (472)
T 1xhb_A           30 TTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRS---G--LIR  104 (472)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCC---C--HHH
T ss_pred             CeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCC---C--hHH
Confidence            577777776544 33333333    33322 24666665444 4445556666666676 46555443322   1  233


Q ss_pred             HHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEe--ecCCcccccC-------CCCcccCccc
Q psy12347        113 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIV--WEKSPVLRTY-------RSKWRVSFSE  183 (428)
Q Consensus       113 ~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~--~~~~~~~R~~-------~~kw~vs~~~  183 (428)
                      +.....++. ..+|++..|+|+.+..+-|..++.....   .+...+++.+  ..........       .-.|......
T Consensus       105 a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (472)
T 1xhb_A          105 ARLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH---DRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRW  180 (472)
T ss_dssp             HHHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH---CTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEE
T ss_pred             HHHHHHHhc-cCCeEEEECCCeEeCccHHHHHHHHHHh---CCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeec
Confidence            445555555 6899999999999998888877765531   2233333331  1111110000       0011111100


Q ss_pred             c--------------CCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        184 Y--------------RDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       184 y--------------~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                      .              .....-+++.|++++++++++.++-.--.. ......||+.+ ++=+...|.+....+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~-~~~~g~ED~dl-~~R~~~~G~~i~~~p  251 (472)
T 1xhb_A          181 YPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAG-MDIWGGENLEI-SFRIWQCGGTLEIVT  251 (472)
T ss_dssp             EECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTT-SCTTCCCCSHH-HHHHHHTTCEEEEEE
T ss_pred             ccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCc-ccccCchhHHH-HHHHHhcCCeEEEcc
Confidence            0              012223577899999999999887321111 22224799998 766667787654443

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=90.06  E-value=2.5  Score=37.55  Aligned_cols=190  Identities=9%  Similarity=0.033  Sum_probs=93.6

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc---cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP---RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV  117 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~---~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~  117 (428)
                      .+-|+|.+.-.....++.|+.--.+   .+.++.+-..+.....+.+++-.+++..|.... .+   |.-  .-.+.+..
T Consensus         6 ~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g   79 (240)
T 3bcv_A            6 KVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSG   79 (240)
T ss_dssp             SEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHH
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHH
Confidence            4556666644333344444433333   566776655453334455555556677776554 22   322  23345556


Q ss_pred             HhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEee--cCCc----ccccC-CCCcccCccc--cCCCC
Q psy12347        118 VYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVW--EKSP----VLRTY-RSKWRVSFSE--YRDHF  188 (428)
Q Consensus       118 ~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~--~~~~----~~R~~-~~kw~vs~~~--y~~~~  188 (428)
                      .+++ +.+|++.+|+|.++....|.+.+.....  ...+..+|+...  ....    ..+.. ...++-....  +-...
T Consensus        80 ~~~a-~g~~i~~lD~Dd~~~~~~l~~l~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (240)
T 3bcv_A           80 LDVA-TGEYVAFCDSDDYVDSDMYMTMYNVAQK--YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDL  156 (240)
T ss_dssp             HHHC-CSSEEEECCTTCCCCTTHHHHHHHHHHH--HTCSEEEC--------------------CEEECSHHHHHHHHGGG
T ss_pred             HHHc-CCCEEEEECCCCcCCHHHHHHHHHHHHh--cCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHH
Confidence            6666 6899999999999998888777665421  123455554311  1110    00000 0001100000  00000


Q ss_pred             C---c-------CccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeec
Q psy12347        189 Y---P-------PHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  241 (428)
Q Consensus       189 y---P-------~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~  241 (428)
                      +   |       ...+|++.++.+++++++--.... ...+..||+.+ ++-+...|.+..-.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~-~~~~~~eD~~~-~~r~~~~g~~i~~~  217 (240)
T 3bcv_A          157 IASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVS-ERILPSEDLIF-NVDVLANSNIVCVL  217 (240)
T ss_dssp             TSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCC-TTTCTTHHHHH-HHHHHTTCSCEEEC
T ss_pred             hhcchhhccccccccchhheeeeHHHHHHcCCccCC-CCCccCCCHHH-HHHHHHhCCEEEEE
Confidence            0   0       013577889999998875201111 11235699998 55555666554444

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=90.03  E-value=7.5  Score=40.17  Aligned_cols=190  Identities=13%  Similarity=0.059  Sum_probs=101.0

Q ss_pred             cEEEEEEcCCCC-HHHHH----HHHHHhcc-cceEEEEecCC-ChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHH
Q psy12347         41 VYLVLIHSAPYN-YERRR----LIRNTWGP-RVSLYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMV  113 (428)
Q Consensus        41 ~lli~V~S~~~~-~~~R~----~IR~TW~~-~~~~~F~vG~~-~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~  113 (428)
                      .+-|+|.+.-.. ...+.    .+++|... ...++.|-..+ ++...+.|++..+.+..|..+....+ .++    ..+
T Consensus       113 ~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~----~~A  187 (570)
T 2d7i_A          113 NTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGL----IRT  187 (570)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCH----HHH
T ss_pred             CeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCH----HHH
Confidence            577777776554 23333    33344333 23666665555 54435666666677766665544332 122    233


Q ss_pred             HHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEee--cCCcc-ccc---C----CCCcccCcc-
Q psy12347        114 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVW--EKSPV-LRT---Y----RSKWRVSFS-  182 (428)
Q Consensus       114 l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~--~~~~~-~R~---~----~~kw~vs~~-  182 (428)
                      .....+.. ..+|+++.|+|+.+...-|..++.....   .....+|..+.  ..... .+.   .    .-.|..... 
T Consensus       188 ~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~~l~~---~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (570)
T 2d7i_A          188 RMLGASVA-TGDVITFLDSHCEANVNWLPPLLDRIAR---NRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKR  263 (570)
T ss_dssp             HHHHHHHC-CSSEEEECCSSEEECTTCSHHHHHHHHH---CTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEE
T ss_pred             HHHHHHhc-CCCEEEEEcCCccccccHHHHHHHHHHh---CCCEEEeeeeeccCCCchhhccccCCcccccccccccccc
Confidence            44444454 6899999999999988877776665421   22345554321  11110 000   0    001211110 


Q ss_pred             -------ccC---CCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeec
Q psy12347        183 -------EYR---DHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  241 (428)
Q Consensus       183 -------~y~---~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~  241 (428)
                             .+.   ...--+++.|++.+++++++..+----.. ......||+-+ .+=+...|.+....
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~-~~~~g~ED~dl-~~Rl~~~G~~i~~~  330 (570)
T 2d7i_A          264 IPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPG-LEIWGGEQYEI-SFKVWMCGGRMEDI  330 (570)
T ss_dssp             ECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTT-CCSSSSHHHHH-HHHHHHTTCEEEEE
T ss_pred             cccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCc-ccccCcchHHH-HHHHHhCCCeEEEc
Confidence                   111   11122467899999999999887321111 22222799998 66666778765443

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=89.79  E-value=4.6  Score=42.76  Aligned_cols=191  Identities=10%  Similarity=0.000  Sum_probs=99.4

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc-----cceEEEEecCC--ChhHHHHHHHHHh-hCCCEEEecccCcCCchh--HHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP-----RVSLYFFIGET--DPSNQTRLDIESE-TYHDIVQGRFWDSYRNLT--YKH  110 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~-----~~~~~F~vG~~--~~~~~~~l~~E~~-~~~DIl~~d~~D~y~nlt--~K~  110 (428)
                      .+-|+|.+--.....++.|..--.+     ...-+.||-..  +......+.+..+ .+..|..+.- +   |+-  .=-
T Consensus       181 kVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~-~---N~G~a~a~  256 (657)
T 4fix_A          181 NIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQ-P---NLGGSGGY  256 (657)
T ss_dssp             CEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEEC-C---CCHHHHHH
T ss_pred             eEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEEC-C---CCCHHHHH
Confidence            7777777754434444444332222     23234454333  3221112222222 2334544432 1   332  223


Q ss_pred             HHHHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEeecCCcc-cccCCC--------Cc----
Q psy12347        111 TMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVWEKSPV-LRTYRS--------KW----  177 (428)
Q Consensus       111 ~~~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~~~~~~-~R~~~~--------kw----  177 (428)
                      -.+++.+.... +++||+..|||+.+..+.|..++.....  .....++|+.+...... .....+        .|    
T Consensus       257 N~Gl~~A~g~~-~~dyIlfLD~D~~~~pd~L~~ll~~l~~--~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~  333 (657)
T 4fix_A          257 SRVMYEALKNT-DCQQILFMDDDIRLEPDSILRVLAMHRF--AKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAP  333 (657)
T ss_dssp             HHHHHHHHHHC-CCSEEEEECSSEEECTHHHHHHHHHHHH--BSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECT
T ss_pred             HHHHHHHHhcC-CCCEEEEECCCCccChhHHHHHHHHHHh--CCCcEEEEeEEecCCCCceeeecccEeccccccccccc
Confidence            44677776654 6899999999999998888777665421  12334566542221111 000000        00    


Q ss_pred             ---c--------cC-----ccccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeec
Q psy12347        178 ---R--------VS-----FSEYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  241 (428)
Q Consensus       178 ---~--------vs-----~~~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~  241 (428)
                         |        +.     ...+.......|++|++.++.+++++.+--  .. .-++..||+-+ +.=+...|.+....
T Consensus       334 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGg--fd-~~F~~~ED~Dl-~lR~~~~G~ki~~~  409 (657)
T 4fix_A          334 HAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQ--PL-PLFIKWDDADY-GLRAAEHGYPTVTL  409 (657)
T ss_dssp             TCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCS--CC-SCSSSSHHHHH-HHHHHHTTCCEEEE
T ss_pred             cccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCC--Ch-hHhccCcHHHH-HHHHHHcCCeEEEE
Confidence               0        00     011122234468899999999999988621  22 33456799998 77777888775444


Q ss_pred             C
Q psy12347        242 S  242 (428)
Q Consensus       242 ~  242 (428)
                      +
T Consensus       410 p  410 (657)
T 4fix_A          410 P  410 (657)
T ss_dssp             E
T ss_pred             C
Confidence            3

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=85.95  E-value=20  Score=36.00  Aligned_cols=186  Identities=12%  Similarity=0.016  Sum_probs=97.5

Q ss_pred             cEEEEEEcCCCCH-HHHH----HHHHHhcc-cceEEEEecCC-ChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHH
Q psy12347         41 VYLVLIHSAPYNY-ERRR----LIRNTWGP-RVSLYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMV  113 (428)
Q Consensus        41 ~lli~V~S~~~~~-~~R~----~IR~TW~~-~~~~~F~vG~~-~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~  113 (428)
                      .+-|+|.+.-... ..+.    .+++|... ...+++|-..+ ++..    ....+.+..|-.+....   |.-  ...+
T Consensus        67 ~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~----~~~~~~~~~v~vi~~~~---n~G--~~~A  137 (501)
T 2ffu_A           67 ATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPED----GALLGKIEKVRVLRNDR---REG--LMRS  137 (501)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHH----HHGGGGBTTEEEEECSS---CCH--HHHH
T ss_pred             CEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHH----HHHHhcCCCEEEEECCC---CcC--HHHH
Confidence            5677777755443 2333    23344333 34677765544 4433    22234566665554333   222  2345


Q ss_pred             HHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEee--cCCcc--------cccCCCCccc----
Q psy12347        114 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVW--EKSPV--------LRTYRSKWRV----  179 (428)
Q Consensus       114 l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~--~~~~~--------~R~~~~kw~v----  179 (428)
                      +....+.. ..+|++.+|+|+.+...-|..++.....   ....++|..+.  .....        .+. .-.|..    
T Consensus       138 ~N~G~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~---~~~~vv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  212 (501)
T 2ffu_A          138 RVRGADAA-QAKVLTFLDSHCECNEHWLEPLLERVAE---DRTRVVSPIIDVINMDNFQYVGASADLKG-GFDWNLVFKW  212 (501)
T ss_dssp             HHHHHHHC-CSSEEEECCSSEEECTTCHHHHHHHHHH---CTTEEEEEEEEEECTTTCCEECBCSSEEE-EECTTCCEEE
T ss_pred             HHHHHHhc-CCCEEEEECCCcccCccHHHHHHHHHHh---CCCeEEEeeeccCcCCCceeecCCcccce-EeeecCCCcc
Confidence            55555665 6899999999999998888777765532   12224444311  11100        000 001111    


Q ss_pred             ---Ccc-------ccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        180 ---SFS-------EYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       180 ---s~~-------~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                         +..       .......-+++.|++.+++++++..+-.--.. ......||+.+ .+-+...|.+....+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~-~~~~g~ED~dl-~~Rl~~~G~~i~~~p  283 (501)
T 2ffu_A          213 DYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMM-MDVWGGENLEI-SFRVWQCGGSLEIIP  283 (501)
T ss_dssp             EECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTT-CCSSSSHHHHH-HHHHHHTTCEEEEEE
T ss_pred             ccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCcc-ccccCcchHHH-HHHHHhcCCeEEEcc
Confidence               100       00111123567899999999999887421111 22233899998 665666776654443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=82.86  E-value=14  Score=38.31  Aligned_cols=183  Identities=9%  Similarity=0.018  Sum_probs=93.7

Q ss_pred             cEEEEEEcCCCCHHHHHHHHHHhcc---cceEEEEecCCChhHHHHHHHHHhhCCCEEEecccCcCCchhHHHHHHHHHH
Q psy12347         41 VYLVLIHSAPYNYERRRLIRNTWGP---RVSLYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV  117 (428)
Q Consensus        41 ~lli~V~S~~~~~~~R~~IR~TW~~---~~~~~F~vG~~~~~~~~~l~~E~~~~~DIl~~d~~D~y~nlt~K~~~~l~w~  117 (428)
                      .+-|+|.+.-.....++.|..--.+   .+.++.+-..+.....+.+++-.+.+..|.... ..   |.-  .-.+++..
T Consensus       376 ~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~---n~G--~~~a~n~g  449 (625)
T 2z86_A          376 LVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QK---NKG--IGSASNTA  449 (625)
T ss_dssp             SEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-EC---CCC--HHHHHHHH
T ss_pred             eEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CC---CCC--HHHHHHHH
Confidence            5666666644333344444433333   567776665553333444544455566666553 22   221  22345555


Q ss_pred             HhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEee-c-CCcccccCCCCcccCccccC-CCCCcCccc
Q psy12347        118 VYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIVW-E-KSPVLRTYRSKWRVSFSEYR-DHFYPPHCH  194 (428)
Q Consensus       118 ~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~~-~-~~~~~R~~~~kw~vs~~~y~-~~~yP~y~~  194 (428)
                      .+.+ +.+|++.+|+|.++..+.|...+..... ...-..++|.... . .+...... ..|  +  .+. ......++.
T Consensus       450 ~~~a-~g~~i~~ld~D~~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~-~~~--~--~~~~~~~~~~~~~  522 (625)
T 2z86_A          450 VRLC-RGFYIGQLDSDDFLEPDAVELCLDEFRK-DLSLACVYTTNRNIDREGNLISNG-YNW--P--IYSREKLTSAMIC  522 (625)
T ss_dssp             HHHC-CSSEEEECCTTCEECTTHHHHHHHHHHH-CTTCSEEEEEEEEECTTSCEEEEC-CCC--S--SCCHHHHTTSCCC
T ss_pred             HHhc-CCCEEEEECCCcccChhHHHHHHHHHHh-CCCeeEEEeeeEEECCCCCEeccC-ccc--c--cCCHHHHhhcccC
Confidence            5665 6899999999999998888777654421 0122334443211 1 11111110 001  0  011 011224556


Q ss_pred             cceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeec
Q psy12347        195 GNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  241 (428)
Q Consensus       195 G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~  241 (428)
                      |++.++.++++.++-.  .. ..+...||.-+ .+-+...| ....+
T Consensus       523 ~~~~~~~r~~~~~~gg--fd-~~~~~~eD~dl-~~r~~~~g-~~~~~  564 (625)
T 2z86_A          523 HHFRMFTARAWNLTEG--FN-ESISNAVDYDM-YLKLSEVG-PFKHI  564 (625)
T ss_dssp             CSCEEEEHHHHTTTTC--CC-SSCSSCHHHHH-HHHHTTTS-CEEEE
T ss_pred             CceEEEEHHHHHHhCC--CC-CccCChHHHHH-HHHHHHhC-CEEEe
Confidence            7788888887654421  11 33456799988 55555566 44433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	428
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	86.5

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.50  E-value=9  Score=33.61  Aligned_cols=192  Identities=11%  Similarity=-0.026  Sum_probs=94.8

Q ss_pred             cEEEEEEcCCCCHH-HHH---HH-HHHhcc-cceEEEEecCC-ChhHHHHHHHHHhhCCCEE-EecccCcCCchhHHHHH
Q psy12347         41 VYLVLIHSAPYNYE-RRR---LI-RNTWGP-RVSLYFFIGET-DPSNQTRLDIESETYHDIV-QGRFWDSYRNLTYKHTM  112 (428)
Q Consensus        41 ~lli~V~S~~~~~~-~R~---~I-R~TW~~-~~~~~F~vG~~-~~~~~~~l~~E~~~~~DIl-~~d~~D~y~nlt~K~~~  112 (428)
                      .+=|+|.+.-.... ...   +| .+|-.. ...++.|=..+ ++.....+++-.+++.+-+ .+....   |.-.  -.
T Consensus        23 ~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~---n~G~--~~   97 (328)
T d1xhba2          23 TTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQ---RSGL--IR   97 (328)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSS---CCCH--HH
T ss_pred             CEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecc---cccc--hH
Confidence            56677777533221 222   22 223222 23455554334 5555555555556655533 333222   2211  23


Q ss_pred             HHHHHHhhCCCccEEEEeCCceEecHHHHHHHHHhccCCCCCcceEEEEEe-ecC--------CcccccC-----CCCcc
Q psy12347        113 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCSIV-WEK--------SPVLRTY-----RSKWR  178 (428)
Q Consensus       113 ~l~w~~~~c~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~~~~~~g~~~-~~~--------~~~~R~~-----~~kw~  178 (428)
                      +.+...+.+ ..+|++.+|+|+.+...-|..++.....  .......|... ...        ....+..     ...|.
T Consensus        98 a~N~Gi~~a-~gd~i~flD~D~~~~p~~l~~l~~~~~~--~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (328)
T d1xhba2          98 ARLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH--DRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWY  174 (328)
T ss_dssp             HHHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH--CTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEE
T ss_pred             HHHHHHHhh-hcceeeecCcccccChhHHHHHHHHHhc--CCCeEEecceeeeccCceeeccCCcccccccccccccccc
Confidence            456666665 6899999999999998877766554421  12222333221 111        0111100     00111


Q ss_pred             -cCcc-------ccCCCCCcCccccceEEeCHHHHHHHHHHhhccCCCCCcchhhhHHHHHHhcCCceeecC
Q psy12347        179 -VSFS-------EYRDHFYPPHCHGNILLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  242 (428)
Q Consensus       179 -vs~~-------~y~~~~yP~y~~G~~YvlS~~~v~~l~~~~~~~~~~~~~eDv~itG~~~~~~~i~~~~~~  242 (428)
                       ++..       .+.....-+++.|+++++++++...+-.--.. ......||+-+ ++=+...|-.....|
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~-~~~~g~ED~Dl-~~R~~~~G~~i~~~p  244 (328)
T d1xhba2         175 PVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAG-MDIWGGENLEI-SFRIWQCGGTLEIVT  244 (328)
T ss_dssp             ECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTT-SCTTCCCCSHH-HHHHHHTTCEEEEEE
T ss_pred             ccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCC-CcCcCchHHHH-HHHHHHhCCeEEEeC
Confidence             1110       01111122567899999999999887221111 22234799998 666667787765443