Psyllid ID: psy12414

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-
Protein Sequence
WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV
Secondary Structure (PSIPRED)
cccccccHHHHHHHHccccccEEEEEEcccccccEEEEEEccEEEEEEEEEcccEEEEccccccccHHHcc
Secondary Structure Prediction (SSPRO)
cEEEEccHHHHHHHccccccccEEEEEcccccccEEEEEEccEEEEEEEEEcccEEcccccccEccHHHHH
Coil and Loop (DISEMBL)
wfhgkisretaesllapkedglflvrestnfpqdfmcvCFESKVEHYRVKYKeahltiddEEFFENLAQLV
Flexible Loop (DISEMBL)
wfhgkisretaesllapkedGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEahltiddeeFFENLAQLV
Low Complexity Region (SEG)
WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV
Disordered region (IsUnstruct)
*******************DGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDDEEFFE******
Disordered Region (DISOPRED)
WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV
Disordered Region (DISEMBL)
WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV
Disordered Region (DISPRO)
WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	71	2.2.26 [Sep-21-2011]
P41239	450	Tyrosine-protein kinase C	yes	N/A	1.0	0.157	0.652	9e-22
P32577	450	Tyrosine-protein kinase C	yes	N/A	1.0	0.157	0.652	3e-21
P41241	450	Tyrosine-protein kinase C	yes	N/A	1.0	0.157	0.652	3e-21
Q0VBZ0	450	Tyrosine-protein kinase C	yes	N/A	1.0	0.157	0.638	4e-21
P41240	450	Tyrosine-protein kinase C	yes	N/A	1.0	0.157	0.638	6e-21
P42679	507	Megakaryocyte-associated	no	N/A	1.0	0.140	0.555	1e-15
P41242	505	Megakaryocyte-associated	no	N/A	1.0	0.140	0.541	8e-15
P41243	467	Megakaryocyte-associated	no	N/A	1.0	0.152	0.541	1e-14
P43405	635	Tyrosine-protein kinase S	no	N/A	1.0	0.111	0.445	2e-08
P00519	1130	Tyrosine-protein kinase A	no	N/A	1.0	0.062	0.410	5e-08

>sp|P41239|CSK_CHICK Tyrosine-protein kinase CSK OS=Gallus gallus GN=CSK PE=1 SV=1

 Score =  102 bits (253), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct: 82  WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIIYSSSKLSID 141

Query: 60  DEEFFENLAQLV 71
           +E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153

Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs). Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane.
Gallus gallus (taxid: 9031)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 2

>sp|P32577|CSK_RAT Tyrosine-protein kinase CSK OS=Rattus norvegicus GN=Csk PE=1 SV=1

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct: 82  WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 141

Query: 60  DEEFFENLAQLV 71
           +E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153

Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs) including LCK, SRC, HCK, FYN, LYN or YES1. Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane. Suppresses signaling by various surface receptors, including T-cell receptor (TCR) and B-cell receptor (BCR) by phosphorylating and maintaining inactive several positive effectors such as FYN or LCK.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P41241|CSK_MOUSE Tyrosine-protein kinase CSK OS=Mus musculus GN=Csk PE=1 SV=2

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct: 82  WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 141

Query: 60  DEEFFENLAQLV 71
           +E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153

Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs) including LCK, SRC, HCK, FYN, LYN or YES1. Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane. Suppresses signaling by various surface receptors, including T-cell receptor (TCR) and B-cell receptor (BCR) by phosphorylating and maintaining inactive several positive effectors such as FYN or LCK.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q0VBZ0|CSK_BOVIN Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK PE=2 SV=1

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct: 82  WFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSID 141

Query: 60  DEEFFENLAQLV 71
           +E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153

Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs) including LCK, SRC, HCK, FYN, LYN or YES1. Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane. Suppresses signaling by various surface receptors, including T-cell receptor (TCR) and B-cell receptor (BCR) by phosphorylating and maintaining inactive several positive effectors such as FYN or LCK.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P41240|CSK_HUMAN Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK PE=1 SV=1

 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct: 82  WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSID 141

Query: 60  DEEFFENLAQLV 71
           +E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153

Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs) including LCK, SRC, HCK, FYN, LYN or YES1. Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane. Suppresses signaling by various surface receptors, including T-cell receptor (TCR) and B-cell receptor (BCR) by phosphorylating and maintaining inactive several positive effectors such as FYN or LCK.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42679|MATK_HUMAN Megakaryocyte-associated tyrosine-protein kinase OS=Homo sapiens GN=MATK PE=1 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKIS + A   L P EDGLFLVRES   P D+ +CV F   V HYRV +++ HLTID
Sbjct: 122 WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 181

Query: 60  DEEFFENLAQLV 71
           +  FF NL  +V
Sbjct: 182 EAVFFCNLMDMV 193

Could play a significant role in the signal transduction of hematopoietic cells. May regulate tyrosine kinase activity of SRC-family members in brain by specifically phosphorylating their C-terminal regulatory tyrosine residue which acts as a negative regulatory site. It may play an inhibitory role in the control of T-cell proliferation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P41242|MATK_MOUSE Megakaryocyte-associated tyrosine-protein kinase OS=Mus musculus GN=Matk PE=2 SV=2

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKIS + A   L P EDGLFLVRES   P D+ +CV F   V HYRV +++ HLTID
Sbjct: 120 WFHGKISGQEAIQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 179

Query: 60  DEEFFENLAQLV 71
           +   F NL  +V
Sbjct: 180 EAVCFCNLMDMV 191

Could play a significant role in the signal transduction of hematopoietic cells. May regulate tyrosine kinase activity of SRC-family members in brain by specifically phosphorylating their C-terminal regulatory tyrosine residue which acts as a negative regulatory site. It may play an inhibitory role in the control of T-cell proliferation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P41243|MATK_RAT Megakaryocyte-associated tyrosine-protein kinase OS=Rattus norvegicus GN=Matk PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKIS + A   L P EDGLFLVRES   P D+ +CV F   V HYRV +++ HLTID
Sbjct: 81  WFHGKISGQEAIQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 140

Query: 60  DEEFFENLAQLV 71
           +   F NL  +V
Sbjct: 141 EAVCFCNLMDMV 152

Could play a significant role in the signal transduction of hematopoietic cells. May regulate tyrosine kinase activity of SRC-family members in brain.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P43405|KSYK_HUMAN Tyrosine-protein kinase SYK OS=Homo sapiens GN=SYK PE=1 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 1   WFHGKISRETAES--LLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRV-KYKEAHLT 57
           WFHGKISRE +E   L+  K +G FL+R   N     +C+  E KV HYR+ K K   L+
Sbjct: 168 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLS 227

Query: 58  IDDEEFFENLAQLV 71
           I + + F+ L QLV
Sbjct: 228 IPEGKKFDTLWQLV 241

Non-receptor tyrosine kinase which mediates signal transduction downstream of a variety of transmembrane receptors including classical immunoreceptors like the B-cell receptor (BCR). Regulates several biological processes including innate and adaptive immunity, cell adhesion, osteoclast maturation, platelet activation and vascular development. Assembles into signaling complexes with activated receptors at the plasma membrane via interaction between its SH2 domains and the receptor tyrosine-phosphorylated ITAM domains. The association with the receptor can also be indirect and mediated by adapter proteins containing ITAM or partial hemITAM domains. The phosphorylation of the ITAM domains is generally mediated by SRC subfamily kinases upon engagement of the receptor. More rarely signal transduction via SYK could be ITAM-independent. Direct downstream effectors phosphorylated by SYK include VAV1, PLCG1, PI-3-kinase, LCP2 and BLNK. Initially identified as essential in B-cell receptor (BCR) signaling, it is necessary for the maturation of B-cells most probably at the pro-B to pre-B transition. Activated upon BCR engagement, it phosphorylates and activates BLNK an adapter linking the activated BCR to downstream signaling adapters and effectors. It also phosphorylates and activates PLCG1 and the PKC signaling pathway. It also phosphorylates BTK and regulates its activity in B-cell antigen receptor (BCR)-coupled signaling. Beside its function downstream of BCR plays also a role in T-cell receptor signaling. Plays also a crucial role in the innate immune response to fungal, bacterial and viral pathogens. It is for instance activated by the membrane lectin CLEC7A. Upon stimulation by fungal proteins, CLEC7A together with SYK activates immune cells inducing the production of ROS. Also activates the inflammasome and NF-kappa-B-mediated transcription of chemokines and cytokines in presence of pathogens. Regulates neutrophil degranulation and phagocytosis through activation of the MAPK signaling cascade. Also mediates the activation of dendritic cells by cell necrosis stimuli. Also involved in mast cells activation. Also functions downstream of receptors mediating cell adhesion. Relays for instance, integrin-mediated neutrophils and macrophages activation and P-selectin receptor/SELPG-mediated recruitment of leukocytes to inflammatory loci. Plays also a role in non-immune processes. It is for instance involved in vascular development where it may regulate blood and lymphatic vascular separation. It is also required for osteoclast development and function. Functions in the activation of platelets by collagen, mediating PLCG2 phosphorylation and activation. May be coupled to the collagen receptor by the ITAM domain-containing FCER1G. Also activated by the membrane lectin CLEC1B that is required for activation of platelets by PDPN/podoplanin. Involved in platelet adhesion being activated by ITGB3 engaged by fibrinogen.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P00519|ABL1_HUMAN Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVKY-KEAHLTI 58
           W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  L +
Sbjct: 127 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 186

Query: 59  DDEEFFENLAQLV 71
             E  F  LA+LV
Sbjct: 187 SSESRFNTLAELV 199

Non-receptor tyrosine-protein kinase that plays a role in many key processes linked to cell growth and survival such as cytoskeleton remodeling in response to extracellular stimuli, cell motility and adhesion, receptor endocytosis, autophagy, DNA damage response and apoptosis. Coordinates actin remodeling through tyrosine phosphorylation of proteins controlling cytoskeleton dynamics like WASF3 (involved in branch formation); ANXA1 (involved in membrane anchoring); DBN1, DBNL, CTTN, RAPH1 and ENAH (involved in signaling); or MAPT and PXN (microtubule-binding proteins). Phosphorylation of WASF3 is critical for the stimulation of lamellipodia formation and cell migration. Involved in the regulation of cell adhesion and motility through phosphorylation of key regulators of these processes such as BCAR1, CRK, CRKL, DOK1, EFS or NEDD9. Phosphorylates multiple receptor tyrosine kinases and more particularly promotes endocytosis of EGFR, facilitates the formation of neuromuscular synapses through MUSK, inhibits PDGFRB-mediated chemotaxis and modulates the endocytosis of activated B-cell receptor complexes. Other substrates which are involved in endocytosis regulation are the caveolin (CAV1) and RIN1. Moreover, ABL1 regulates the CBL family of ubiquitin ligases that drive receptor down-regulation and actin remodeling. Phosphorylation of CBL leads to increased EGFR stability. Involved in late-stage autophagy by regulating positively the trafficking and function of lysosomal components. ABL1 targets to mitochondria in response to oxidative stress and thereby mediates mitochondrial dysfunction and cell death. ABL1 is also translocated in the nucleus where it has DNA-binding activity and is involved in DNA-damage response and apoptosis. Many substrates are known mediators of DNA repair: DDB1, DDB2, ERCC3, ERCC6, RAD9A, RAD51, RAD52 or WRN. Activates the proapoptotic pathway when the DNA damage is too severe to be repaired. Phosphorylates TP73, a primary regulator for this type of damage-induced apoptosis. Phosphorylates PSMA7 that leads to an inhibition of proteasomal activity and cell cycle transition blocks. ABL1 acts also as a regulator of multiple pathological signaling cascades during infection. Several known tyrosine-phosphorylated microbial proteins have been identified as ABL1 substrates. This is the case of A36R of Vaccinia virus, Tir (translocated intimin receptor) of pathogenic E.coli and possibly Citrobacter, CagA (cytotoxin-associated gene A) of H.pylori, or AnkA (ankyrin repeat-containing protein A) of A.phagocytophilum. Pathogens can highjack ABL1 kinase signaling to reorganize the host actin cytoskeleton for multiple purposes, like facilitating intracellular movement and host cell exit. Finally, functions as its own regulator through autocatalytic activity as well as through phosphorylation of its inhibitor, ABI1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
332022929	539	Tyrosine-protein kinase CSK [Acromyrmex	1.0	0.131	0.777	2e-27
307202938	527	Tyrosine-protein kinase CSK [Harpegnatho	1.0	0.134	0.777	2e-27
307178918	499	Tyrosine-protein kinase CSK [Camponotus	1.0	0.142	0.777	3e-27
322787463	521	hypothetical protein SINV_08984 [Solenop	1.0	0.136	0.777	3e-27
383852499	494	PREDICTED: tyrosine-protein kinase CSK-l	1.0	0.143	0.777	4e-27
345485152	295	PREDICTED: proto-oncogene tyrosine-prote	1.0	0.240	0.791	5e-27
45550738	805	C-terminal Src kinase, isoform H [Drosop	1.0	0.088	0.763	6e-27
24646022	723	C-terminal Src kinase, isoform I [Drosop	1.0	0.098	0.763	6e-27
390178771	1114	GA30184, isoform A [Drosophila pseudoobs	1.0	0.063	0.763	6e-27
221378832	1052	C-terminal Src kinase, isoform G [Drosop	1.0	0.067	0.763	6e-27

>gi|332022929|gb|EGI63197.1| Tyrosine-protein kinase CSK [Acromyrmex echinatior]

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKISRETAE LL P+EDGLFLVRESTNFP D+ +CVC++ +V+HYRVKYK   LTID
Sbjct: 166 WFHGKISRETAERLLRPREDGLFLVRESTNFPGDYTLCVCYQGRVQHYRVKYKNNQLTID 225

Query: 60  DEEFFENLAQLV 71
           DEEFFENLA LV
Sbjct: 226 DEEFFENLALLV 237

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202938|gb|EFN82158.1| Tyrosine-protein kinase CSK [Harpegnathos saltator]

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKISRETAE LL P+EDGLFLVRESTNFP D+ +CVC++ +V+HYRVKYK   LTID
Sbjct: 154 WFHGKISRETAERLLRPREDGLFLVRESTNFPGDYTLCVCYQGRVQHYRVKYKNNQLTID 213

Query: 60  DEEFFENLAQLV 71
           DEEFFENLA LV
Sbjct: 214 DEEFFENLALLV 225

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178918|gb|EFN67440.1| Tyrosine-protein kinase CSK [Camponotus floridanus]

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKISRETAE LL P+EDGLFLVRESTNFP D+ +CVC++ +V+HYRVKYK   LTID
Sbjct: 126 WFHGKISRETAERLLRPREDGLFLVRESTNFPGDYTLCVCYQGRVQHYRVKYKNNQLTID 185

Query: 60  DEEFFENLAQLV 71
           DEEFFENLA LV
Sbjct: 186 DEEFFENLALLV 197

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787463|gb|EFZ13551.1| hypothetical protein SINV_08984 [Solenopsis invicta]

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKISRETAE LL P+EDGLFLVRESTNFP D+ +CVC++ +V+HYRVKYK   LTID
Sbjct: 148 WFHGKISRETAERLLRPREDGLFLVRESTNFPGDYTLCVCYQGRVQHYRVKYKNNQLTID 207

Query: 60  DEEFFENLAQLV 71
           DEEFFENLA LV
Sbjct: 208 DEEFFENLALLV 219

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852499|ref|XP_003701764.1| PREDICTED: tyrosine-protein kinase CSK-like [Megachile rotundata]

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKISRETAE LL P+EDGLFLVRESTNFP D+ +CVC++ +V+HYRVKYK   LTID
Sbjct: 121 WFHGKISRETAERLLRPREDGLFLVRESTNFPGDYTLCVCYQGRVQHYRVKYKNNQLTID 180

Query: 60  DEEFFENLAQLV 71
           DEEFFENLA LV
Sbjct: 181 DEEFFENLALLV 192

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485152|ref|XP_003425204.1| PREDICTED: proto-oncogene tyrosine-protein kinase Src-like [Nasonia vitripennis]

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/72 (79%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKISRETAE LL P+EDGLFLVRESTNFP D+ +CVC++ KV+HYRVKYK   LTID
Sbjct: 157 WFHGKISRETAERLLRPREDGLFLVRESTNFPGDYTLCVCYQGKVQHYRVKYKNNQLTID 216

Query: 60  DEEFFENLAQLV 71
           DEEFFENLA LV
Sbjct: 217 DEEFFENLALLV 228

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45550738|ref|NP_650097.2| C-terminal Src kinase, isoform H [Drosophila melanogaster] gi|45446455|gb|AAF54668.3| C-terminal Src kinase, isoform H [Drosophila melanogaster]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/72 (76%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHG I+R+ AE LL P+EDGLFLVRESTNFP D+ +CVCF+SKVEHYRVKY E  LTID
Sbjct: 437 WFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTID 496

Query: 60  DEEFFENLAQLV 71
           DEE+FENL QLV
Sbjct: 497 DEEYFENLGQLV 508

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24646022|ref|NP_731607.1| C-terminal Src kinase, isoform I [Drosophila melanogaster] gi|24646024|ref|NP_731608.1| C-terminal Src kinase, isoform J [Drosophila melanogaster] gi|24646026|ref|NP_731609.1| C-terminal Src kinase, isoform K [Drosophila melanogaster] gi|28573084|ref|NP_788638.1| C-terminal Src kinase, isoform F [Drosophila melanogaster] gi|23171028|gb|AAN13519.1| C-terminal Src kinase, isoform I [Drosophila melanogaster] gi|23171029|gb|AAN13520.1| C-terminal Src kinase, isoform J [Drosophila melanogaster] gi|23171030|gb|AAN13521.1| C-terminal Src kinase, isoform K [Drosophila melanogaster] gi|28381250|gb|AAO41544.1| C-terminal Src kinase, isoform F [Drosophila melanogaster]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/72 (76%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHG I+R+ AE LL P+EDGLFLVRESTNFP D+ +CVCF+SKVEHYRVKY E  LTID
Sbjct: 355 WFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTID 414

Query: 60  DEEFFENLAQLV 71
           DEE+FENL QLV
Sbjct: 415 DEEYFENLGQLV 426

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390178771|ref|XP_003736723.1| GA30184, isoform A [Drosophila pseudoobscura pseudoobscura] gi|388859583|gb|EIM52796.1| GA30184, isoform A [Drosophila pseudoobscura pseudoobscura]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/72 (76%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHG I+R+ AE LL P+EDGLFLVRESTNFP D+ +CVCF+SKVEHYRVKY E  LTID
Sbjct: 746 WFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTID 805

Query: 60  DEEFFENLAQLV 71
           DEE+FENL QLV
Sbjct: 806 DEEYFENLGQLV 817

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221378832|ref|NP_731611.2| C-terminal Src kinase, isoform G [Drosophila melanogaster] gi|442618589|ref|NP_001262476.1| C-terminal Src kinase, isoform L [Drosophila melanogaster] gi|220903053|gb|AAN13523.2| C-terminal Src kinase, isoform G [Drosophila melanogaster] gi|440217320|gb|AGB95858.1| C-terminal Src kinase, isoform L [Drosophila melanogaster]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/72 (76%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHG I+R+ AE LL P+EDGLFLVRESTNFP D+ +CVCF+SKVEHYRVKY E  LTID
Sbjct: 684 WFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTID 743

Query: 60  DEEFFENLAQLV 71
           DEE+FENL QLV
Sbjct: 744 DEEYFENLGQLV 755

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
FB|FBgn0262081	1052	Csk "C-terminal Src kinase" [D	1.0	0.067	0.763	7.9e-25
UNIPROTKB|F1P034	447	F1P034 "Uncharacterized protei	1.0	0.158	0.652	2.8e-20
UNIPROTKB|F1NMH8	448	F1NMH8 "Uncharacterized protei	1.0	0.158	0.652	2.8e-20
UNIPROTKB|P41239	450	CSK "Tyrosine-protein kinase C	1.0	0.157	0.652	2.8e-20
MGI|MGI:88537	450	Csk "c-src tyrosine kinase" [M	1.0	0.157	0.652	2.8e-20
RGD|1308800	450	Csk "c-src tyrosine kinase" [R	1.0	0.157	0.652	2.8e-20
UNIPROTKB|F1SJ27	449	CSK "Uncharacterized protein"	1.0	0.158	0.638	3.6e-20
UNIPROTKB|Q0VBZ0	450	CSK "Tyrosine-protein kinase C	1.0	0.157	0.638	3.7e-20
UNIPROTKB|E2RFF7	450	CSK "Uncharacterized protein"	1.0	0.157	0.638	3.7e-20
ZFIN|ZDB-GENE-061103-493	450	csk "c-src tyrosine kinase" [D	1.0	0.157	0.638	3.7e-20

FB|FBgn0262081 Csk "C-terminal Src kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 295 (108.9 bits), Expect = 7.9e-25, P = 7.9e-25
 Identities = 55/72 (76%), Positives = 62/72 (86%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHG I+R+ AE LL P+EDGLFLVRESTNFP D+ +CVCF+SKVEHYRVKY E  LTID
Sbjct:   684 WFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTID 743

Query:    60 DEEFFENLAQLV 71
             DEE+FENL QLV
Sbjct:   744 DEEYFENLGQLV 755

GO:0004713 "protein tyrosine kinase activity" evidence=ISS;IDA;NAS

GO:0007165 "signal transduction" evidence=NAS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0008285 "negative regulation of cell proliferation" evidence=IMP;NAS

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0045926 "negative regulation of growth" evidence=IGI;IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IMP

GO:0034334 "adherens junction maintenance" evidence=IMP

GO:0010669 "epithelial structure maintenance" evidence=IMP

GO:0043068 "positive regulation of programmed cell death" evidence=IMP

GO:0007293 "germarium-derived egg chamber formation" evidence=IMP

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

UNIPROTKB|F1P034 F1P034 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 47/72 (65%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct:    82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIIYSSSKLSID 141

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   142 EEVYFENLMQLV 153

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NMH8 F1NMH8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 47/72 (65%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct:    79 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIIYSSSKLSID 138

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   139 EEVYFENLMQLV 150

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0042997 "negative regulation of Golgi to plasma membrane protein transport" evidence=IEA

UNIPROTKB|P41239 CSK "Tyrosine-protein kinase CSK" [Gallus gallus (taxid:9031)]

 Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 47/72 (65%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct:    82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIIYSSSKLSID 141

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   142 EEVYFENLMQLV 153

GO:0005524 "ATP binding" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

MGI|MGI:88537 Csk "c-src tyrosine kinase" [Mus musculus (taxid:10090)]

 Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 47/72 (65%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct:    82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 141

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   142 EEVYFENLMQLV 153

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=ISO;TAS

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=TAS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;TAS

GO:0005911 "cell-cell junction" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=ISO;TAS

GO:0008285 "negative regulation of cell proliferation" evidence=ISO;IGI;IMP

GO:0010989 "negative regulation of low-density lipoprotein particle clearance" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=TAS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019903 "protein phosphatase binding" evidence=ISO

GO:0032715 "negative regulation of interleukin-6 production" evidence=ISO

GO:0033673 "negative regulation of kinase activity" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=TAS

GO:0042997 "negative regulation of Golgi to plasma membrane protein transport" evidence=ISO

GO:0043406 "positive regulation of MAP kinase activity" evidence=ISO

GO:0045121 "membrane raft" evidence=ISO

GO:0045779 "negative regulation of bone resorption" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0050765 "negative regulation of phagocytosis" evidence=ISO

GO:0050863 "regulation of T cell activation" evidence=TAS

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=ISO

GO:0070064 "proline-rich region binding" evidence=ISO

GO:0070373 "negative regulation of ERK1 and ERK2 cascade" evidence=ISO

GO:0071375 "cellular response to peptide hormone stimulus" evidence=ISO

RGD|1308800 Csk "c-src tyrosine kinase" [Rattus norvegicus (taxid:10116)]

 Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 47/72 (65%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct:    82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 141

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   142 EEVYFENLMQLV 153

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0005813 "centrosome" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0005911 "cell-cell junction" evidence=IEA;ISO

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007420 "brain development" evidence=IEP

GO:0008285 "negative regulation of cell proliferation" evidence=ISO;IDA

GO:0010989 "negative regulation of low-density lipoprotein particle clearance" evidence=IDA

GO:0019903 "protein phosphatase binding" evidence=IPI

GO:0032715 "negative regulation of interleukin-6 production" evidence=IDA

GO:0033673 "negative regulation of kinase activity" evidence=IDA

GO:0034332 "adherens junction organization" evidence=IEP

GO:0042997 "negative regulation of Golgi to plasma membrane protein transport" evidence=IEA;ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0043406 "positive regulation of MAP kinase activity" evidence=IDA

GO:0045121 "membrane raft" evidence=IDA

GO:0045779 "negative regulation of bone resorption" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0048709 "oligodendrocyte differentiation" evidence=IEP

GO:0050765 "negative regulation of phagocytosis" evidence=IDA

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=IDA

GO:0070064 "proline-rich region binding" evidence=IPI

GO:0070373 "negative regulation of ERK1 and ERK2 cascade" evidence=IDA

GO:0071375 "cellular response to peptide hormone stimulus" evidence=IDA

UNIPROTKB|F1SJ27 CSK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 244 (91.0 bits), Expect = 3.6e-20, P = 3.6e-20
 Identities = 46/72 (63%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct:    81 WFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSID 140

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   141 EEVYFENLMQLV 152

GO:0042997 "negative regulation of Golgi to plasma membrane protein transport" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|Q0VBZ0 CSK "Tyrosine-protein kinase CSK" [Bos taurus (taxid:9913)]

 Score = 244 (91.0 bits), Expect = 3.7e-20, P = 3.7e-20
 Identities = 46/72 (63%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct:    82 WFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSID 141

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   142 EEVYFENLMQLV 153

GO:0005886 "plasma membrane" evidence=IEA

GO:0042997 "negative regulation of Golgi to plasma membrane protein transport" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2RFF7 CSK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 3.7e-20, P = 3.7e-20
 Identities = 46/72 (63%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct:    82 WFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSID 141

Query:    60 DEEFFENLAQLV 71
             +E +FENL QLV
Sbjct:   142 EEVYFENLMQLV 153

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

ZFIN|ZDB-GENE-061103-493 csk "c-src tyrosine kinase" [Danio rerio (taxid:7955)]

 Score = 244 (91.0 bits), Expect = 3.7e-20, P = 3.7e-20
 Identities = 46/72 (63%), Positives = 56/72 (77%)

Query:     1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
             WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y    L+ID
Sbjct:    82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIIYHNGKLSID 141

Query:    60 DEEFFENLAQLV 71
             +EE+FENL QL+
Sbjct:   142 EEEYFENLMQLM 153

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0060027 "convergent extension involved in gastrulation" evidence=IMP

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P32577	CSK_RAT	2, ., 7, ., 1, 0, ., 2	0.6527	1.0	0.1577	yes	N/A
P41241	CSK_MOUSE	2, ., 7, ., 1, 0, ., 2	0.6527	1.0	0.1577	yes	N/A
P41240	CSK_HUMAN	2, ., 7, ., 1, 0, ., 2	0.6388	1.0	0.1577	yes	N/A
P41239	CSK_CHICK	2, ., 7, ., 1, 0, ., 2	0.6527	1.0	0.1577	yes	N/A
Q0VBZ0	CSK_BOVIN	2, ., 7, ., 1, 0, ., 2	0.6388	1.0	0.1577	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	71
cd09937	98	cd09937, SH2_csk_like, Src homology 2 (SH2) domain	4e-42
smart00252	84	smart00252, SH2, Src homology 2 domains	8e-22
pfam00017	77	pfam00017, SH2, SH2 domain	3e-20
cd10347	81	cd10347, SH2_Nterm_shark_like, N-terminal Src homo	2e-17
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	3e-17
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	1e-14
cd10401	99	cd10401, SH2_C-SH2_Syk_like, C-terminal Src homolo	1e-13
cd09941	95	cd09941, SH2_Grb2_like, Src homology 2 domain foun	9e-13
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	2e-11
cd10413	108	cd10413, SH2_Grb7, Src homology 2 (SH2) domain fou	2e-11
cd09944	108	cd09944, SH2_Grb7_family, Src homology 2 (SH2) dom	3e-11
cd09925	104	cd09925, SH2_SHC, Src homology 2 (SH2) domain foun	6e-11
cd10352	91	cd10352, SH2_a2chimerin_b2chimerin, Src homology 2	9e-11
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	2e-10
cd10343	103	cd10343, SH2_SHIP, Src homology 2 (SH2) domain fou	2e-10
cd09926	106	cd09926, SH2_CRK_like, Src homology 2 domain found	3e-10
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	4e-10
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	5e-10
cd10348	86	cd10348, SH2_Cterm_shark_like, C-terminal Src homo	3e-09
cd09938	104	cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src	1e-08
cd10414	108	cd10414, SH2_Grb14, Src homology 2 (SH2) domain fo	2e-08
cd10400	103	cd10400, SH2_SAP1a, Src homology 2 (SH2) domain fo	6e-08
cd09945	98	cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2	7e-08
cd10337	136	cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in	9e-08
cd10415	108	cd10415, SH2_Grb10, Src homology 2 (SH2) domain fo	2e-07
cd10357	87	cd10357, SH2_ShkD_ShkE, Src homology 2 (SH2) domai	3e-07
cd09930	104	cd09930, SH2_cSH2_p85_like, C-terminal Src homolog	5e-07
cd10402	105	cd10402, SH2_C-SH2_Zap70, C-terminal Src homology	1e-06
cd10405	103	cd10405, SH2_Vav1, Src homology 2 (SH2) domain fou	1e-06
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	1e-06
cd09940	102	cd09940, SH2_Vav_family, Src homology 2 (SH2) doma	1e-06
cd10351	103	cd10351, SH2_SH2D4B, Src homology 2 domain found i	3e-06
cd10390	98	cd10390, SH2_SHD, Src homology 2 domain found in S	3e-06
cd09927	116	cd09927, SH2_Tensin_like, Src homology 2 domain fo	5e-06
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	9e-06
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	9e-06
cd10408	97	cd10408, SH2_Nck1, Src homology 2 (SH2) domain fou	1e-05
cd10360	79	cd10360, SH2_Srm, Src homology 2 (SH2) domain foun	1e-05
cd10356	113	cd10356, SH2_ShkA_ShkC, Src homology 2 (SH2) domai	1e-05
cd09946	102	cd09946, SH2_HSH2_like, Src homology 2 domain foun	1e-05
cd10406	103	cd10406, SH2_Vav2, Src homology 2 (SH2) domain fou	1e-05
cd10349	77	cd10349, SH2_SH2D2A_SH2D7, Src homology 2 domain f	2e-05
cd10340	99	cd10340, SH2_N-SH2_SHP_like, N-terminal Src homolo	2e-05
cd10411	97	cd10411, SH2_SH2B2, Src homology 2 (SH2) domain fo	3e-05
cd10353	103	cd10353, SH2_Nterm_RasGAP, N-terminal Src homology	3e-05
cd09923	81	cd09923, SH2_SOCS_family, Src homology 2 (SH2) dom	4e-05
cd10388	101	cd10388, SH2_SOCS7, Src homology 2 (SH2) domain fo	7e-05
cd10391	98	cd10391, SH2_SHE, Src homology 2 domain found in S	8e-05
cd10342	103	cd10342, SH2_SAP1, Src homology 2 (SH2) domain fou	1e-04
cd10346	97	cd10346, SH2_SH2B_family, Src homology 2 (SH2) dom	1e-04
cd10416	102	cd10416, SH2_SH2D2A, Src homology 2 domain found i	1e-04
cd10370	96	cd10370, SH2_Src_Src42, Src homology 2 (SH2) domai	1e-04
cd09934	104	cd09934, SH2_Tec_family, Src homology 2 (SH2) doma	1e-04
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	2e-04
cd10361	90	cd10361, SH2_Fps_family, Src homology 2 (SH2) doma	2e-04
cd10355	92	cd10355, SH2_DAPP1_BAM32_like, Src homology 2 doma	3e-04
cd10392	98	cd10392, SH2_SHF, Src homology 2 domain found in S	4e-04
cd10417	102	cd10417, SH2_SH2D7, Src homology 2 domain found in	4e-04
cd09929	121	cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) dom	9e-04
cd10412	97	cd10412, SH2_SH2B3, Src homology 2 (SH2) domain fo	9e-04
cd10399	106	cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain	0.001
cd10365	101	cd10365, SH2_Src_Src, Src homology 2 (SH2) domain	0.002
cd10389	97	cd10389, SH2_SHB, Src homology 2 domain found in S	0.002
cd10387	100	cd10387, SH2_SOCS6, Src homology 2 (SH2) domain fo	0.002
cd10350	103	cd10350, SH2_SH2D4A, Src homology 2 domain found i	0.002
cd10407	103	cd10407, SH2_Vav3, Src homology 2 (SH2) domain fou	0.003
cd10409	98	cd10409, SH2_Nck2, Src homology 2 (SH2) domain fou	0.003
cd10339	101	cd10339, SH2_RIN_family, Src homology 2 (SH2) doma	0.004

>gnl|CDD|198190 cd09937, SH2_csk_like, Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

 Score =  131 bits (332), Expect = 4e-42
 Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKISRE AE LL P EDGLFLVRESTN+P D+ +CV FE KVEHYRV Y+   LTID
Sbjct: 5  WFHGKISREEAERLLQPPEDGLFLVRESTNYPGDYTLCVSFEGKVEHYRVIYRNGKLTID 64

Query: 60 DEEFFENLAQLV 71
          +EE+FENL QLV
Sbjct: 65 EEEYFENLIQLV 76

Both the C-terminal Src kinase (CSK) and CSK-homologous kinase (CHK) are members of the CSK-family of protein tyrosine kinases. These proteins suppress activity of Src-family kinases (SFK) by selectively phosphorylating the conserved C-terminal tail regulatory tyrosine by a similar mechanism. CHK is also capable of inhibiting SFKs by a non-catalytic mechanism that involves binding of CHK to SFKs to form stable protein complexes. The unphosphorylated form of SFKs is inhibited by CSK and CHK by a two-step mechanism. The first step involves the formation of a complex of SFKs with CSK/CHK with the SFKs in the complex are inactive. The second step, involves the phosphorylation of the C-terminal tail tyrosine of SFKs, which then dissociates and adopt an inactive conformation. The structural basis of how the phosphorylated SFKs dissociate from CSK/CHK to adopt the inactive conformation is not known. The inactive conformation of SFKs is stabilized by two intramolecular inhibitory interactions: (a) the pYT:SH2 interaction in which the phosphorylated C-terminal tail tyrosine (YT) binds to the SH2 domain, and (b) the linker:SH3 interaction of which the SH2-kinase domain linker binds to the SH3 domain. SFKs are activated by multiple mechanisms including binding of the ligands to the SH2 and SH3 domains to displace the two inhibitory intramolecular interactions, autophosphorylation, and dephosphorylation of YT. By selective phosphorylation and the non-catalytic inhibitory mechanism CSK and CHK are able to inhibit the active forms of SFKs. CSK and CHK are regulated by phosphorylation and inter-domain interactions. They both contain SH3, SH2, and kinase domains separated by the SH3-SH2 connector and SH2 kinase linker, intervening segments separating the three domains. They lack a conserved tyrosine phosphorylation site in the kinase domain and the C-terminal tail regulatory tyrosine phosphorylation site. The CSK SH2 domain is crucial for stabilizing the kinase domain in the active conformation. A disulfide bond here regulates CSK kinase activity. The subcellular localization and activity of CSK are regulated by its SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 80.0 bits (198), Expect = 8e-22
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-LTI 58
          W+HG ISRE AE LL  + DG FLVR+S + P D+ + V  + KV+HYR++  E     +
Sbjct: 3  WYHGFISREEAEKLLKNEGDGDFLVRDSESSPGDYVLSVRVKGKVKHYRIRRNEDGKFYL 62

Query: 59 DDEEFFENLAQLV 71
          +    F +L +LV
Sbjct: 63 EGGRKFPSLVELV 75

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 75.7 bits (187), Expect = 3e-20
 Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-LT 57
          W+HGKISRE AE LL  PK DG FLVRES + P D+ + V  + +V+HYR++  +     
Sbjct: 1  WYHGKISREEAERLLLNPKPDGTFLVRESESKPGDYTLSVRDDGRVKHYRIQSLDNGGYY 60

Query: 58 IDDEEFFENLAQLV 71
          I     F +L +LV
Sbjct: 61 ISGGVTFNSLPELV 74

Length = 77

>gnl|CDD|198210 cd10347, SH2_Nterm_shark_like, N-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 68.6 bits (168), Expect = 2e-17
 Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 5/76 (6%)

Query: 1  WFHGKISRETAESLLAPK--EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY--KEAH 55
          W+HGKISRE AE+LL  +   DGLFLVREST+ P D+ + +  + +V HY+++   ++A 
Sbjct: 3  WYHGKISREVAEALLLREGGRDGLFLVRESTSAPGDYVLSLLAQGEVLHYQIRRHGEDAF 62

Query: 56 LTIDDEEFFENLAQLV 71
           + D    F  L  L+
Sbjct: 63 FSDDGPLIFHGLDTLI 78

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in the carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 67.9 bits (166), Expect = 3e-17
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFM--CVCFESKVEHYRVKYKEA--HL 56
          WFHG ISRE AE LL  K DG FLVRES++ P D++      + KV+HY ++  E   +L
Sbjct: 2  WFHGSISREEAERLLRGKPDGTFLVRESSSEPGDYVLSVRSGDGKVKHYLIERNEGGYYL 61

Query: 57 TIDDEEFFENLAQLV 71
                 F +L +LV
Sbjct: 62 LGGSGRTFPSLPELV 76

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 61.6 bits (150), Expect = 1e-14
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLTI 58
          W+HG ISR  AE LL+   +G FLVRES + P  + + + ++ +V HYR+    +  + +
Sbjct: 5  WYHGPISRNAAEYLLSSGINGSFLVRESESSPGQYSISLRYDGRVYHYRISEDSDGKVYV 64

Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 65 TQEHRFNTLAELV 77

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|198264 cd10401, SH2_C-SH2_Syk_like, C-terminal Src homology 2 (SH2) domain found in Spleen tyrosine kinase (Syk) proteins

 Score = 59.5 bits (144), Expect = 1e-13
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDFMCVCFESKVEHYRV-KYKEAHLT 57
          WFHGKISRE +E +L    K +G FL+RE  N     +C+  + KV HYR+ K K   L+
Sbjct: 5  WFHGKISREESEQILLIGSKTNGKFLIRERDNNGSYALCLLHDGKVLHYRIDKDKTGKLS 64

Query: 58 IDDEEFFENLAQLV 71
          I D + F+ L QLV
Sbjct: 65 IPDGKKFDTLWQLV 78

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the C-terminus SH2 domains of Syk. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|199828 cd09941, SH2_Grb2_like, Src homology 2 domain found in Growth factor receptor-bound protein 2 (Grb2) and similar proteins

 Score = 56.9 bits (138), Expect = 9e-13
 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDFM-CVCFESKVEHYRV-KYKEAHLT 57
          WFHGKISR  AE +L   + DG FL+RES + P DF   V F + V+H++V +       
Sbjct: 5  WFHGKISRAEAEEILMNQRPDGAFLIRESESSPGDFSLSVKFGNDVQHFKVLRDGAGKYF 64

Query: 58 IDDEEFFENLAQLV 71
          +   +F  +L +LV
Sbjct: 65 LWVVKFN-SLNELV 77

The adaptor proteins here include homologs Grb2 in humans, Sex muscle abnormal protein 5 (Sem-5) in Caenorhabditis elegans, and Downstream of receptor kinase (drk) in Drosophila melanogaster. They are composed of one SH2 and two SH3 domains. Grb2/Sem-5/drk regulates the Ras pathway by linking the tyrosine kinases to the Ras guanine nucleotide releasing protein Sos, which converts Ras to the active GTP-bound state. The SH2 domain of Grb2/Sem-5/drk binds class II phosphotyrosyl peptides while its SH3 domain binds to Sos and Sos-derived, proline-rich peptides. Besides it function in Ras signaling, Grb2 is also thought to play a role in apoptosis. Unlike most SH2 structures in which the peptide binds in an extended conformation (such that the +3 peptide residue occupies a hydrophobic pocket in the protein, conferring a modest degree of selectivity), Grb2 forms several hydrogen bonds via main chain atoms with the side chain of +2 Asn. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 95

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 54.2 bits (131), Expect = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDFM--CVCFESKVEHYRVKYKEAHLT 57
          WFHG +S + AE LL  K + G FLVRES + P DF+      + KV H  ++ +     
Sbjct: 2  WFHGHLSGKEAEKLLLEKGKPGSFLVRESQSKPGDFVLSVRTDDDKVTHIMIRCQGGKYD 61

Query: 58 IDDEEFFENLAQLV 71
          +   E F++L  LV
Sbjct: 62 VGGGEEFDSLTDLV 75

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198276 cd10413, SH2_Grb7, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 54.1 bits (130), Expect = 2e-11
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA--- 54
          WFHG+ISRE ++ L+  +   DG+FLVRES   PQ F + +C   KV+HY +   E    
Sbjct: 7  WFHGRISREESQRLIGQQGLVDGVFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 66

Query: 55 -HLTIDD-EEFFENLAQLV 71
           + ++DD +  F +L QLV
Sbjct: 67 LYFSMDDGQTRFTDLLQLV 85

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb7 is part of the Grb7 family of proteins which also includes Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198197 cd09944, SH2_Grb7_family, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 53.6 bits (129), Expect = 3e-11
 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPK--EDGLFLVRESTNFPQDF-MCVCFESKVEHYRV----KYKE 53
          WFHG ISR+ A  L+  +   DG+FLVRES + P  F + +    K++HY++       +
Sbjct: 7  WFHGGISRDEAARLIRQQGLVDGVFLVRESQSNPGAFVLSLKHGQKIKHYQIIPIEDEGQ 66

Query: 54 AHLTIDD-EEFFENLAQLV 71
           + T+DD    F +L QLV
Sbjct: 67 WYFTLDDGVTKFYDLLQLV 85

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. There are 3 members of the Grb7 family of proteins: Grb7, Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR). Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198179 cd09925, SH2_SHC, Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)

 Score = 52.7 bits (127), Expect = 6e-11
 Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF 35
          W+HGK+SR  AESLL  + DG FLVREST  P  +
Sbjct: 9  WYHGKMSRRDAESLL--QTDGDFLVRESTTTPGQY 41

SHC is involved in a wide variety of pathways including regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. An adapter protein, SHC has been implicated in Ras activation following the stimulation of a number of different receptors, including growth factors [insulin, epidermal growth factor (EGF), nerve growth factor, and platelet derived growth factor (PDGF)], cytokines [interleukins 2, 3, and 5], erythropoietin, and granulocyte/macrophage colony-stimulating factor, and antigens [T-cell and B-cell receptors]. SHC has been shown to bind to tyrosine-phosphorylated receptors, and receptor stimulation leads to tyrosine phosphorylation of SHC. Upon phosphorylation, SHC interacts with another adapter protein, Grb2, which binds to the Ras GTP/GDP exchange factor mSOS which leads to Ras activation. SHC is composed of an N-terminal domain that interacts with proteins containing phosphorylated tyrosines, a (glycine/proline)-rich collagen-homology domain that contains the phosphorylated binding site, and a C-terminal SH2 domain. SH2 has been shown to interact with the tyrosine-phosphorylated receptors of EGF and PDGF and with the tyrosine-phosphorylated C chain of the T-cell receptor, providing one of the mechanisms of T-cell-mediated Ras activation. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198215 cd10352, SH2_a2chimerin_b2chimerin, Src homology 2 (SH2) domain found in alpha2-chimerin and beta2-chimerin proteins

 Score = 52.0 bits (125), Expect = 9e-11
 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)

Query: 2  FHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTID 59
          +HG ISRE AE LL+   DG +L+RES+     + + + F  KV++Y++ Y  + H    
Sbjct: 9  YHGLISREEAEQLLSGASDGSYLIRESSRDDGYYTLSLRFNGKVKNYKLYYDGKNHYHYV 68

Query: 60 DEEFFENLAQLV 71
           E+ F+ +  LV
Sbjct: 69 GEKRFDTIHDLV 80

Chimerins are a family of phorbol ester- and diacylglycerol-responsive GTPase-activating proteins. Alpha1-chimerin (formerly known as n-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All of the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. Other C1 domain-containing diacylglycerol receptors including: PKC, Munc-13 proteins, phorbol ester binding scaffolding proteins involved in Ca2+-stimulated exocytosis, and RasGRPs, diacylglycerol-activated guanine-nucleotide exchange factors (GEFs) for Ras and Rap1. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 91

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 51.6 bits (124), Expect = 2e-10
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 8/62 (12%)

Query: 1  WFHGKIS--RETAESLLA---PKEDGLFLVRESTNFPQDFMCVCF--ESKVEHYRVKYKE 53
          WFHGK+   R+ AE LL       DG FLVRES  F  D+  + F    KV+H R++ ++
Sbjct: 6  WFHGKLGDGRDEAEKLLLEYCEGGDGTFLVRESETFVGDY-TLSFWRNGKVQHCRIRSRQ 64

Query: 54 AH 55
           +
Sbjct: 65 EN 66

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198206 cd10343, SH2_SHIP, Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

 Score = 51.7 bits (124), Expect = 2e-10
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHLT 57
          W+HG I+R  AE LL+   +DG FLVR+S +    + +CV +++ V  YR+    E  L+
Sbjct: 5  WYHGNITRSKAEELLSKAGKDGSFLVRDSESVSGAYALCVLYQNCVHTYRILPNAEDKLS 64

Query: 58 IDDEE-----FFENLAQLV 71
          +   E     FF  L +L+
Sbjct: 65 VQASEGVPVRFFTTLPELI 83

The SH2-containing inositol-5'-phosphatase, SHIP (also called SHIP1/SHIP1a), is a hematopoietic-restricted phosphatidylinositide phosphatase that translocates to the plasma membrane after extracellular stimulation and hydrolyzes the phosphatidylinositol-3-kinase (PI3K)-generated second messenger PI-3,4,5-P3 (PIP3) to PI-3,4-P2. As a result, SHIP dampens down PIP3 mediated signaling and represses the proliferation, differentiation, survival, activation, and migration of hematopoietic cells. PIP3 recruits lipid-binding pleckstrin homology(PH) domain-containing proteins to the inner wall of the plasma membrane and activates them. PH domain-containing downstream effectors include the survival/proliferation enhancing serine/threonine kinase, Akt (protein kinase B), the tyrosine kinase, Btk, the regulator of protein translation, S6K, and the Rac and cdc42 guanine nucleotide exchange factor, Vav. SHIP is believed to act as a tumor suppressor during leukemogenesis and lymphomagenesis, and may play a role in activating the immune system to combat cancer. SHIP contains an N-terminal SH2 domain, a centrally located phosphatase domain that specifically hydrolyzes the 5'-phosphate from PIP3, PI-4,5-P2 and inositol-1,3,4,5- tetrakisphosphate (IP4), a C2 domain, that is an allosteric activating site when bound by SHIP's enzymatic product, PI-3,4-P2; 2 NPXY motifs that bind proteins with a phosphotyrosine binding (Shc, Dok 1, Dok 2) or an SH2 (p85a, SHIP2) domain; and a proline-rich domain consisting of four PxxP motifs that bind a subset of SH3-containing proteins including Grb2, Src, Lyn, Hck, Abl, PLCg1, and PIAS1. The SH2 domain of SHIP binds to the tyrosine phosphorylated forms of Shc, SHP-2, Doks, Gabs, CD150, platelet-endothelial cell adhesion molecule, Cas, c-Cbl, immunoreceptor tyrosine-based inhibitory motifs (ITIMs), and immunoreceptor tyrosine-based activation motifs (ITAMs). The X-linked lymphoproliferative syndrome (XLP) gene encodes SAP (also called SH2D1A/DSHP) a protein that consists of a 5 residue N-terminus, a single SH2 domain, and a short 25 residue C-terminal tail. XLP is characterized by an extreme sensitivity to Epstein-Barr virus. Both T and natural killer (NK) cell dysfunctions have been seen in XLP patients. SAP binds the cytoplasmic tail of Signaling lymphocytic activation molecule (SLAM), 2B4, Ly-9, and CD84. SAP is believed to function as a signaling inhibitor, by blocking or regulating binding of other signaling proteins. SAP and the SAP-like protein EAT-2 recognize the sequence motif TIpYXX(V/I), which is found in the cytoplasmic domains of a restricted number of T, B, and NK cell surface receptors and are proposed to be natural inhibitors or regulators of the physiological role of a small family of receptors on the surface of these cells. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198180 cd09926, SH2_CRK_like, Src homology 2 domain found in cancer-related signaling adaptor protein CRK

 Score = 51.3 bits (123), Expect = 3e-10
 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHY 47
          W+ G +SR+ A+ LL  +  G+FLVR+S+  P D+ + V   S+V HY
Sbjct: 9  WYFGPMSRQEAQELLQGQRHGVFLVRDSSTIPGDYVLSVSENSRVSHY 56

SH2 domain in the CRK proteins. CRKI (SH2-SH3) and CRKII (SH2-SH3-SH3) are splicing isoforms of the oncoprotein CRK. CRKs regulate transcription and cytoskeletal reorganization for cell growth and motility by linking tyrosine kinases to small G proteins. The SH2 domain of CRK associates with tyrosine-phosphorylated receptors or components of focal adhesions, such as p130Cas and paxillin. CRK transmits signals to small G proteins through effectors that bind its SH3 domain, such as C3G, the guanine-nucleotide exchange factor (GEF) for Rap1 and R-Ras, and DOCK180, the GEF for Rac6. The binding of p130Cas to the CRK-C3G complex activates Rap1, leading to regulation of cell adhesion, and activates R-Ras, leading to JNK-mediated activation of cell proliferation, whereas the binding of CRK DOCK180 induces Rac1-mediated activation of cellular migration. The activity of the different splicing isoforms varies greatly with CRKI displaying substantial transforming activity, CRKII less so, and phosphorylated CRKII with no biological activity whatsoever. CRKII has a linker region with a phosphorylated Tyr and an additional C-terminal SH3 domain. The phosphorylated Tyr creates a binding site for its SH2 domain which disrupts the association between CRK and its SH2 target proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 49.7 bits (119), Expect = 4e-10
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDFMCVCF--ESKVEHYRV 49
          WFHGKISRE A ++L      G FLVRES N P D+  + F     ++H+++
Sbjct: 2  WFHGKISREEAYNMLVKVGGPGSFLVRESDNTPGDYS-LSFRVNEGIKHFKI 52

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 50.3 bits (121), Expect = 5e-10
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDFMCVCF--ESKVEHYRVKYKEAHLT 57
          WFH  ++RE AE +L     DG FLVR S   P  F  + F  E K++H R+K +     
Sbjct: 6  WFHANLTREQAEEMLMRVPRDGAFLVRPSETDPNSFA-ISFRAEGKIKHCRIKQEGRLFV 64

Query: 58 IDDEEFFENLAQLV 71
          I   + FE+L +LV
Sbjct: 65 IGTSQ-FESLVELV 77

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198211 cd10348, SH2_Cterm_shark_like, C-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 47.8 bits (114), Expect = 3e-09
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA-HL 56
          W HG + R  A  +L  K   DG FLVR S   P  + + + +E+ V H+ ++ ++    
Sbjct: 2  WLHGALDRNEAVEILKQKADADGSFLVRYSRRRPGGYVLTLVYENHVYHFEIQNRDDKWF 61

Query: 57 TIDDEEFFENLAQLV 71
           IDD  +FE+L  L+
Sbjct: 62 YIDDGPYFESLEHLI 76

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in its carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 86

>gnl|CDD|198191 cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70) and Spleen tyrosine kinase (Syk) proteins

 Score = 46.6 bits (111), Expect = 1e-08
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          +F+G I+RE AE  L  A   DGLFL+R+S      + + VC   K  HY +
Sbjct: 3  FFYGSITREEAEEYLKLAGMSDGLFLLRQSLRSLGGYVLSVCHGRKFHHYTI 54

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the N-terminus SH2 domains of both Syk and Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198277 cd10414, SH2_Grb14, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 14 (Grb14) proteins

 Score = 46.5 bits (110), Expect = 2e-08
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRV----KYKE 53
          WFH KISR+ A+ L+  +   DG+FLVR+S + P+ F + +    K++H+++       E
Sbjct: 7  WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPRTFVLSMSHGQKIKHFQIIPVEDDGE 66

Query: 54 AHLTIDD-EEFFENLAQLV 71
             T+DD    F +L QLV
Sbjct: 67 LFHTLDDGHTRFTDLIQLV 85

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb14 is part of the Grb7 family of proteins which also includes Grb7, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR) and weakly to the erbB2 receptor. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198263 cd10400, SH2_SAP1a, Src homology 2 (SH2) domain found in SLAM-associated protein (SAP) 1a

 Score = 45.2 bits (107), Expect = 6e-08
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 2  FHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA 54
          +HGKISRET E LL A   DG +L+R+S + P  + +CV ++  V  YRV   E 
Sbjct: 6  YHGKISRETGEKLLLAAGLDGSYLLRDSESVPGVYCLCVLYKGYVYTYRVSQTET 60

The X-linked lymphoproliferative syndrome (XLP) gene encodes SAP (also called SH2D1A/DSHP) a protein that consists of a 5 residue N-terminus, a single SH2 domain, and a short 25 residue C-terminal tail. XLP is characterized by an extreme sensitivity to Epstein-Barr virus. Both T and natural killer (NK) cell dysfunctions have been seen in XLP patients. SAP binds the cytoplasmic tail of Signaling lymphocytic activation molecule (SLAM), 2B4, Ly-9, and CD84. SAP is believed to function as a signaling inhibitor, by blocking or regulating binding of other signaling proteins. SAP and the SAP-like protein EAT-2 recognize the sequence motif TIpYXX[VI], which is found in the cytoplasmic domains of a restricted number of T, B, and NK cell surface receptors and are proposed to be natural inhibitors or regulators of the physiological role of a small family of receptors on the surface of these cells. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198198 cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF)

 Score = 44.7 bits (106), Expect = 7e-08
 Identities = 18/35 (51%), Positives = 25/35 (71%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF 35
          W+HG I+R  AESLL P ++G +LVR S +  QD+
Sbjct: 3  WYHGAITRIEAESLLRPCKEGSYLVRNSESTKQDY 37

SHB, SHD, SHE, and SHF are SH2 domain-containing proteins that play various roles throughout the cell. SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. SHE is expressed in heart, lung, brain, and skeletal muscle, while expression of SHD is restricted to the brain. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198200 cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in the Breast Cancer Anti-estrogen Resistance protein 3

 Score = 45.4 bits (108), Expect = 9e-08
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCF 40
          W+HG+I R+ AESL+  + +G FLVR+S + P D++  C 
Sbjct: 8  WYHGRIPRQVAESLV--QREGDFLVRDSLSSPGDYVLTCR 45

BCAR3 is part of a growing family of guanine nucleotide exchange factors is responsible for activation of Ras-family GTPases, including Sos1 and 2, GRF1 and 2, CalDAG-GEF/GRP1-4, C3G, cAMP-GEF/Epac 1 and 2, PDZ-GEFs, MR-GEF, RalGDS family members, RalGPS, RasGEF, Smg GDS, and phospholipase C(epsilon). 12102558 21262352 BCAR3 binds to the carboxy-terminus of BCAR1/p130Cas, a focal adhesion adapter protein. Over expression of BCAR1 (p130Cas) and BCAR3 induces estrogen independent growth in normally estrogen-dependent cell lines. They have been linked to resistance to anti-estrogens in breast cancer, Rac activation, and cell motility, though the BCAR3/p130Cas complex is not required for this activity in BCAR3. Many BCAR3-mediated signaling events in epithelial and mesenchymal cells are independent of p130Cas association. Structurally these proteins contain a single SH2 domain upstream of their RasGEF domain, which is responsible for the ability of BCAR3 to enhance p130Cas over-expression-induced migration. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 136

>gnl|CDD|198278 cd10415, SH2_Grb10, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 10 (Grb10) proteins

 Score = 44.2 bits (104), Expect = 2e-07
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRV----KYKE 53
          WFHG+ISRE +  ++  +   DGLFL+R+S + P+ F + +C   K++++++       +
Sbjct: 7  WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66

Query: 54 AHLTIDD-EEFFENLAQLV 71
             ++DD    F +L QLV
Sbjct: 67 TFFSLDDGNTKFSDLIQLV 85

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb10 is part of the Grb7 family of proteins which also includes Grb7, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198220 cd10357, SH2_ShkD_ShkE, Src homology 2 (SH2) domain found in SH2 domain-bearing protein kinases D and E (ShkD and ShkE)

 Score = 42.9 bits (101), Expect = 3e-07
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF---MCVCFESKVEHYRVKYKE 53
          WFHG ISR+ AE  L  + +G FL+R S+  P+     +    +SK  H R+   +
Sbjct: 12 WFHGDISRDEAEKRLRGRPEGTFLIRLSSTDPKKTPFTISKKKKSKPVHKRISRID 67

SH2-bearing genes cloned from Dictyostelium include two transcription factors, STATa and STATc, and a signaling factor, SHK1 (shkA). A database search of the Dictyostelium discoideum genome revealed two additional putative STAT sequences, dd-STATb and dd-STATd, and four additional putative SHK genes, dd-SHK2 (shkB), dd-SHK3 (shkC), dd-SHK4 (shkD), and dd-SHK5 (shkE). This model contains members of shkD and shkE. All of the SHK members are most closely related to the protein kinases found in plants. However these kinases in plants are not conjugated to any SH2 or SH2-like sequences. Alignment data indicates that the SHK SH2 domains carry some features of the STAT SH2 domains in Dictyostelium. When STATc's linker domain was used for a BLAST search, the sequence between the protein kinase domain and the SH2 domain (the linker) of SHK was recovered, suggesting a close relationship among these molecules within this region. SHK's linker domain is predicted to contain an alpha-helix which is indeed homologous to that of STAT. Based on the phylogenetic alignment, SH2 domains can be grouped into two categories, STAT-type and Src-type. SHK family members are in between, but are closer to the STAT-type which indicates a close relationship between SHK and STAT families in their SH2 domains and further supports the notion that SHKs linker-SH2 domain evolved from STAT or STATL (STAT-like Linker-SH2) domain found in plants. In SHK, STAT, and SPT6, the linker-SH2 domains all reside exclusively in the C-terminal regions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 87

>gnl|CDD|198184 cd09930, SH2_cSH2_p85_like, C-terminal Src homology 2 (cSH2) domain found in p85

 Score = 42.8 bits (101), Expect = 5e-07
 Identities = 19/46 (41%), Positives = 24/46 (52%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEH 46
          W  G I+R  AE LL  K DG FL+RES+        V    +V+H
Sbjct: 8  WLVGDINRTQAEELLRGKPDGTFLIRESSTQGCYACSVVCNGEVKH 53

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, a inter SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and 2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, 2) p85 iSH2 domain with C2 domain of p110alpha, and 3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198265 cd10402, SH2_C-SH2_Zap70, C-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70)

 Score = 41.8 bits (98), Expect = 1e-06
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDFMCVCFESKVEHYRV-KYKEAHLT 57
          W+HG I+R+ AE  L    + DG FL+RE        + + +   V HYR+ + K    +
Sbjct: 12 WYHGSIARDEAERRLYSGAQPDGKFLLRERKESGTYALSLVYGKTVYHYRIDQDKSGKYS 71

Query: 58 IDDEEFFENLAQLV 71
          I +   F+ L QLV
Sbjct: 72 IPEGTKFDTLWQLV 85

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the C-terminus SH2 domains of Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 105

>gnl|CDD|198268 cd10405, SH2_Vav1, Src homology 2 (SH2) domain found in the Vav1 proteins

 Score = 41.9 bits (98), Expect = 1e-06
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G + R  AES+LA + DG +LVR+      +F + + +  +V+H ++   E    I 
Sbjct: 7  WYAGPMERAGAESILANRSDGTYLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRIT 66

Query: 60 DEEFFENLAQLV 71
          +++ F  L +LV
Sbjct: 67 EKKAFRGLTELV 78

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav1 plays a role in T-cell and B-cell development and activation. It has been identified as the specific binding partner of Nef proteins from HIV-1, resulting in morphological changes, cytoskeletal rearrangements, and the JNK/SAPK signaling cascade, leading to increased levels of viral transcription and replication. Vav1 has been shown to interact with Ku70, PLCG1, Lymphocyte cytosolic protein 2, Janus kinase 2, SIAH2, S100B, Abl gene, ARHGDIB, SHB, PIK3R1, PRKCQ, Grb2, MAPK1, Syk, Linker of activated T cells, Cbl gene and EZH2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 21/86 (24%)

Query: 1  WFHGKISRETAES-LLAPK-EDGLFLVRESTNFPQDF-MCV-----CFESKVEHYRVKYK 52
          WF GKI R+ AE  LLAP    G FL+RES   P  + + V          V+HYR++  
Sbjct: 5  WFFGKIKRKDAEKLLLAPGNPRGTFLIRESETTPGAYSLSVRDGDDARGDTVKHYRIR-- 62

Query: 53 EAHLTIDDEEF-------FENLAQLV 71
               +D+  +       F  L +LV
Sbjct: 63 ----KLDNGGYYITTRATFPTLQELV 84

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198193 cd09940, SH2_Vav_family, Src homology 2 (SH2) domain found in the Vav family

 Score = 41.5 bits (98), Expect = 1e-06
 Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLT-I 58
          WF G++ R+TAE+ L  + DG +LVR        + + + +   V+H +++ +   L  +
Sbjct: 7  WFVGEMERDTAENRLENRPDGTYLVRVRPQGETQYALSIKYNGDVKHMKIEQRSDGLYYL 66

Query: 59 DDEEFFENLAQLV 71
           +   F++L +LV
Sbjct: 67 SESRHFKSLVELV 79

Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, Vav2 and Vav3 are more ubiquitously expressed. The members here include insect and amphibian Vavs. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|198214 cd10351, SH2_SH2D4B, Src homology 2 domain found in the SH2 domain containing protein 4B (SH2D4B)

 Score = 40.6 bits (95), Expect = 3e-06
 Identities = 18/28 (64%), Positives = 20/28 (71%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES 28
          WFHG ISRE AE+LL    +G FLVR S
Sbjct: 9  WFHGIISREEAEALLMNATEGSFLVRVS 36

SH2D4B contains a single SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198253 cd10390, SH2_SHD, Src homology 2 domain found in SH2 domain-containing adapter proteins D (SHD)

 Score = 40.5 bits (94), Expect = 3e-06
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQD 34
          WFHG +SR  AE+LL+  ++G +LVR S   PQD
Sbjct: 3  WFHGPLSRADAENLLSLCKEGSYLVRLSETRPQD 36

The expression of SHD is restricted to the brain. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198181 cd09927, SH2_Tensin_like, Src homology 2 domain found in Tensin-like proteins

 Score = 40.5 bits (95), Expect = 5e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF 35
          W+   ISR+ A +LL  K  G FLVR+ST +   +
Sbjct: 5  WYKPNISRDQAIALLKDKPPGTFLVRDSTTYKGAY 39

SH2 domain found in Tensin-like proteins. The Tensins are a family of intracellular proteins that interact with receptor tyrosine kinases (RTKs), integrins, and actin. They are thought act as signaling bridges between the extracellular space and the cytoskeleton. There are four homologues: Tensin1, Tensin2 (TENC1, C1-TEN), Tensin3 and Tensin4 (cten), all of which contain a C-terminal tandem SH2-PTB domain pairing, as well as actin-binding regions that may localize them to focal adhesions. The isoforms of Tensin2 and Tensin3 contain N-terminal C1 domains, which are atypical and not expected to bind to phorbol esters. Tensins 1-3 contain a phosphatase (PTPase) and C2 domain pairing which resembles PTEN (phosphatase and tensin homologue deleted on chromosome 10) protein. PTEN is a lipid phosphatase that dephosphorylates phosphatidylinositol 3,4,5-trisphosphate (PtdIns(3,4,5)P3) to yield phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). As PtdIns(3,4,5)P3 is the product of phosphatidylinositol 3-kinase (PI3K) activity, PTEN is therefore a key negative regulator of the PI3K pathway. Because of their PTEN-like domains, the Tensins may also possess phosphoinositide-binding or phosphatase capabilities. However, only Tensin2 and Tensin3 have the potential to be phosphatases since only their PTPase domains contain a cysteine residue that is essential for catalytic activity. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 116

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 39.4 bits (92), Expect = 9e-06
 Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W++G+I+R  AE+LL     +G FL+R+S + P D+ + +    + +H++V+  +    I
Sbjct: 3  WYYGRITRHQAETLLNEHGHEGDFLIRDSESNPGDYSVSLKAPGRNKHFKVQVVDNVYCI 62

Query: 59 DDEEF 63
             +F
Sbjct: 63 GQRKF 67

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 39.5 bits (92), Expect = 9e-06
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 9/67 (13%)

Query: 1  WFHGKISRETAE-SLLAPK-EDGLFLVRESTNFPQDFMCVCFESK-VEHYRVKYKEAHLT 57
          WF G I R  AE  LL  + + G FL+RES +   +F     +   V+HYR++       
Sbjct: 5  WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGEFSLSVLDGGVVKHYRIR------R 58

Query: 58 IDDEEFF 64
          +D+  FF
Sbjct: 59 LDEGGFF 65

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|198271 cd10408, SH2_Nck1, Src homology 2 (SH2) domain found in Nck

 Score = 39.2 bits (91), Expect = 1e-05
 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W++GK++R  AE  L  +  +G FL+R+S + P DF + +  + K +H++V+ KE    I
Sbjct: 3  WYYGKVTRHQAEMALNERGNEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKECVYCI 62

Query: 59 DDEEF 63
             +F
Sbjct: 63 GQRKF 67

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198223 cd10360, SH2_Srm, Src homology 2 (SH2) domain found in Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristoylation sites (srm)

 Score = 38.8 bits (90), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHL 56
          W+   ISR  A+ LL   P E G FL+R S +    + + V  ++KV HYR+       L
Sbjct: 2  WYFSGISRTQAQQLLLSPPNEPGAFLIRPSESSLGGYSLSVRAQAKVCHYRICMAPSGSL 61

Query: 57 TIDDEEFFENLAQLV 71
           +     F  L +L+
Sbjct: 62 YLQKGRLFPGLEELL 76

Srm is a nonreceptor protein kinase that has two SH2 domains, a SH3 domain, and a kinase domain with a tyrosine residue for autophosphorylation. However it lacks an N-terminal glycine for myristoylation and a C-terminal tyrosine which suppresses kinase activity when phosphorylated. Srm is most similar to members of the Tec family who other members include: Tec, Btk/Emb, and Itk/Tsk/Emt. However Srm differs in its N-terminal unique domain it being much smaller than in the Tec family and is closer to Src. Srm is thought to be a new family of nonreceptor tyrosine kinases that may be redundant in function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 79

>gnl|CDD|198219 cd10356, SH2_ShkA_ShkC, Src homology 2 (SH2) domain found in SH2 domain-bearing protein kinases A and C (ShkA and ShkC)

 Score = 39.5 bits (92), Expect = 1e-05
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMC--VCFESKVEHYRV 49
          WFHG IS   +E+ L  K +G FLVR ST+ P  +    V     + H R+
Sbjct: 12 WFHGDISTSESENRLNGKPEGTFLVRFSTSEPGAYTISKVSKNGGISHQRI 62

SH2-bearing genes cloned from Dictyostelium include two transcription factors, STATa and STATc, and a signaling factor, SHK1 (shkA). A database search of the Dictyostelium discoideum genome revealed two additional putative STAT sequences, dd-STATb and dd-STATd, and four additional putative SHK genes, dd-SHK2 (shkB), dd-SHK3 (shkC), dd-SHK4 (shkD), and dd-SHK5 (shkE). This model contains members of shkA and shkC. All of the SHK members are most closely related to the protein kinases found in plants. However these kinases in plants are not conjugated to any SH2 or SH2-like sequences. Alignment data indicates that the SHK SH2 domains carry some features of the STAT SH2 domains in Dictyostelium. When STATc's linker domain was used for a BLAST search, the sequence between the protein kinase domain and the SH2 domain (the linker) of SHK was recovered, suggesting a close relationship among these molecules within this region. SHK's linker domain is predicted to contain an alpha-helix which is indeed homologous to that of STAT. Based on the phylogenetic alignment, SH2 domains can be grouped into two categories, STAT-type and Src-type. SHK family members are in between, but are closer to the STAT-type which indicates a close relationship between SHK and STAT families in their SH2 domains and further supports the notion that SHKs linker-SH2 domain evolved from STAT or STATL (STAT-like Linker-SH2) domain found in plants. In SHK, STAT, and SPT6, the linker-SH2 domains all reside exclusively in the C-terminal regions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 113

>gnl|CDD|198199 cd09946, SH2_HSH2_like, Src homology 2 domain found in hematopoietic SH2 (HSH2) protein

 Score = 39.1 bits (91), Expect = 1e-05
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES 28
          WFHG ISRE AE++L  +  G FL+R S
Sbjct: 9  WFHGAISREAAENMLESQPLGSFLIRVS 36

HSH2 is thought to function as an adapter protein involved in tyrosine kinase signaling. It may also be involved in regulating cytokine signaling and cytoskeletal reorganization in hematopoietic cells. HSH2 contains several putative protein-binding motifs, SH3-binding proline-rich regions, and phosphotyrosine sites, but lacks enzymatic motifs. HSH2 was found to interact with cytokine-regulated tyrosine kinase c-FES and an activated Cdc42-associated tyrosine kinase ACK1. HSH2 binds c-FES through both its C-terminal region and its N-terminal region including the SH2 domain and binds ACK1 via its N-terminal proline-rich region. Both kinases bound and tyrosine-phosphorylated HSH2 in mammalian cells. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|198269 cd10406, SH2_Vav2, Src homology 2 (SH2) domain found in the Vav2 proteins

 Score = 39.3 bits (91), Expect = 1e-05
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WF G + R+  ++LL     G +L+RE     + F + + F  +V+H +V  K+  + I 
Sbjct: 7  WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHIT 66

Query: 60 DEEFFENLAQLV 71
          + + FE+L +LV
Sbjct: 67 EAKKFESLLELV 78

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav2 is a GEF for RhoA, RhoB and RhoG and may activate Rac1 and Cdc42. Vav2 has been shown to interact with CD19 and Grb2. Alternatively spliced transcript variants encoding different isoforms have been found for Vav2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|199830 cd10349, SH2_SH2D2A_SH2D7, Src homology 2 domain found in the SH2 domain containing protein 2A and 7 (SH2D2A and SH2D7)

 Score = 38.3 bits (89), Expect = 2e-05
 Identities = 17/28 (60%), Positives = 19/28 (67%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES 28
          WFHG I+R  AE LL PK  G +LVR S
Sbjct: 2  WFHGFITRREAERLLEPKPQGCYLVRFS 29

SH2D2A and SH7 both contain a single SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|198203 cd10340, SH2_N-SH2_SHP_like, N-terminal Src homology 2 (N-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WFH  IS   AE+LL  +  DG FL R S + P DF + V    +V H +++    +  +
Sbjct: 2  WFHPVISGIEAENLLKTRGVDGSFLARPSKSNPGDFTLSVRRGDEVTHIKIQNTGDYYDL 61

Query: 59 DDEEFFENLAQLV 71
             E F  L++LV
Sbjct: 62 YGGEKFATLSELV 74

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [IVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198274 cd10411, SH2_SH2B2, Src homology 2 (SH2) domain found in SH2B adapter proteins (SH2B1, SH2B2, SH2B3)

 Score = 38.1 bits (88), Expect = 3e-05
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 1  WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA 54
          WFHG +SR  A  L+    P+  GLF++R+S   P ++ +   F+ K +H R+     
Sbjct: 10 WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSLNGH 67

SH2B2 (APS), like other members of the SH2B adapter protein family, contains a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B1 and SH2B2 function in signaling pathways found downstream of growth hormone receptor and receptor tyrosine kinases, including the insulin, insulin-like growth factor-I (IGF-I), platelet-derived growth factor (PDGF), nerve growth factor, hepatocyte growth factor, and fibroblast growth factor receptors. SH2B2beta, a new isoform of SH2B2, is an endogenous inhibitor of SH2B1 and/or SH2B2 (SH2B2alpha), negatively regulating insulin signaling and/or JAK2-mediated cellular responses. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198216 cd10353, SH2_Nterm_RasGAP, N-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 38.3 bits (89), Expect = 3e-05
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)

Query: 1  WFHGKISRETAES-LLAPKEDGLFLVRESTNFPQDFMCVCFESK--VEHYRV 49
          W+HG++ R  AE  L    + G +L+RES   P  F+ + F S+  V H+R+
Sbjct: 21 WYHGRLDRTIAEERLRQAGKLGSYLIRESDRRPGSFV-LSFLSRTGVNHFRI 71

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general the longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the N-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198178 cd09923, SH2_SOCS_family, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family

 Score = 37.2 bits (87), Expect = 4e-05
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES 28
          W+ G I+R  AE LLA K +G FLVR+S
Sbjct: 2  WYWGGITRYEAEELLAGKPEGTFLVRDS 29

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198251 cd10388, SH2_SOCS7, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 36.9 bits (86), Expect = 7e-05
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCF--ESKVEHYRVKYKE 53
          W+ G +S E AE +L+ K DG FLVR+S++  +    + F  +  V H R++  +
Sbjct: 12 WYWGPMSWEDAEKVLSNKPDGSFLVRDSSD-DRYIFSLSFRSQGSVHHTRIEQYQ 65

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198254 cd10391, SH2_SHE, Src homology 2 domain found in SH2 domain-containing adapter protein E (SHE)

 Score = 36.9 bits (85), Expect = 8e-05
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES 28
          W+HG ISR  AES L P ++  +LVR S
Sbjct: 3  WYHGSISRAEAESRLQPCKEASYLVRNS 30

SHE is expressed in heart, lung, brain, and skeletal muscle. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198205 cd10342, SH2_SAP1, Src homology 2 (SH2) domain found in SLAM-associated protein (SAP)1

 Score = 36.5 bits (84), Expect = 1e-04
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPKE-DGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHLT 57
           +HGKISRET E LL     DG +L+R+S + P  + +CV +   +  YRV + +    +
Sbjct: 5  VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWS 64

Query: 58 IDDE-----EFFENLAQLV 71
           +        +F  +  L+
Sbjct: 65 AETAPGVHKRYFRKIKNLI 83

The X-linked lymphoproliferative syndrome (XLP) gene encodes SAP (also called SH2D1A/DSHP) a protein that consists of a 5 residue N-terminus, a single SH2 domain, and a short 25 residue C-terminal tail. XLP is characterized by an extreme sensitivity to Epstein-Barr virus. Both T and natural killer (NK) cell dysfunctions have been seen in XLP patients. SAP binds the cytoplasmic tail of Signaling lymphocytic activation molecule (SLAM), 2B4, Ly-9, and CD84. SAP is believed to function as a signaling inhibitor, by blocking or regulating binding of other signaling proteins. SAP and the SAP-like protein EAT-2 recognize the sequence motif TIpYXX[VI], which is found in the cytoplasmic domains of a restricted number of T, B, and NK cell surface receptors and are proposed to be natural inhibitors or regulators of the physiological role of a small family of receptors on the surface of these cells. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198209 cd10346, SH2_SH2B_family, Src homology 2 (SH2) domain found in SH2B adapter protein family

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 1  WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WFHG +SR  A  L+        G+FLVR+S     +F +   F+ + +H R+
Sbjct: 10 WFHGTLSRSDAAQLVLHSGADGHGVFLVRQSETRRGEFVLTFNFQGRAKHLRL 62

The SH2B adapter protein family has 3 members: SH2B1 (SH2-B, PSM), SH2B2 (APS), and SH2B3 (Lnk). SH2B family members contain a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B1 and SH2B2 function in signaling pathways found downstream of growth hormone receptor and receptor tyrosine kinases, including the insulin, insulin-like growth factor-I (IGF-I), platelet-derived growth factor (PDGF), nerve growth factor, hepatocyte growth factor, and fibroblast growth factor receptors. SH2B2beta, a new isoform of SH2B2, is an endogenous inhibitor of SH2B1 and/or SH2B2 (SH2B2alpha), negatively regulating insulin signaling and/or JAK2-mediated cellular responses. SH2B3 negatively regulates lymphopoiesis and early hematopoiesis. The lnk-deficiency results in enhanced production of B cells, and expansion as well as enhanced function of hematopoietic stem cells (HSCs), demonstrating negative regulatory functions of Sh2b3/Lnk in cytokine signaling. Sh2b3/Lnk also functions in responses controlled by cell adhesion and in crosstalk between integrin- and cytokine-mediated signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198279 cd10416, SH2_SH2D2A, Src homology 2 domain found in the SH2 domain containing protein 2A (SH2D2A)

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 17/28 (60%), Positives = 19/28 (67%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES 28
          WFHG I+R  AE LL PK  G +LVR S
Sbjct: 9  WFHGFITRREAERLLEPKPQGCYLVRFS 36

SH2D2A contains a single SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|198233 cd10370, SH2_Src_Src42, Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAES--LLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVK-YKEAHL 56
          W+ GKI R  AE   LL   E G FL+R+S +   D+ + V     V+HYR++   E   
Sbjct: 5  WYFGKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGF 64

Query: 57 TIDDEEFFENLAQLV 71
           I     F  L +LV
Sbjct: 65 FIARRTTFRTLQELV 79

Src42 is a member of the Src non-receptor type tyrosine kinase family of proteins. The integration of receptor tyrosine kinase-induced RAS and Src42 signals by Connector eNhancer of KSR (CNK) as a two-component input is essential for RAF activation in Drosophila. Src42 is present in a wide variety of organisms including: California sea hare, pea aphid, yellow fever mosquito, honey bee, Panamanian leafcutter ant, and sea urchin. Src42 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|198188 cd09934, SH2_Tec_family, Src homology 2 (SH2) domain found in Tec-like proteins

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFP----QDFMCVCFESKVEHYRVK 50
          W+ G +SR+ AESLL  + ++G F+VR S+         F  V     V+HY +K
Sbjct: 8  WYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTVSLFTKVPGSPHVKHYHIK 62

The Tec protein tyrosine kinase is the founding member of a family that includes Btk, Itk, Bmx, and Txk. The members have a PH domain, a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is involved in B-cell receptor signaling with mutations in Btk responsible for X-linked agammaglobulinemia (XLA) in humans and X-linked immunodeficiency (xid) in mice. Itk is involved in T-cell receptor signaling. Tec is expressed in both T and B cells, and is thought to function in activated and effector T lymphocytes to induce the expression of genes regulated by NFAT transcription factors. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF 35
          W+ G ISRE     +    DG FLVR+++    D+
Sbjct: 9  WYWGDISREEVNEKMRDTPDGTFLVRDASTMKGDY 43

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|198224 cd10361, SH2_Fps_family, Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES---TNFPQDFM-CVCFESKVEHYRVKYKEAHL 56
          ++HG + RE AE LL  K DG FLVR++       +  +  V ++ K+ H+ +   +   
Sbjct: 8  YYHGLLPREDAEELL--KNDGDFLVRKTEPKGGGKRKLVLSVRWDGKIRHFVINRDDGGK 65

Query: 57 TIDDEEFFENLAQLV 71
             + + F+++++L+
Sbjct: 66 YYIEGKSFKSISELI 80

The Fps family consists of members Fps/Fes and Fer/Flk/Tyk3. They are cytoplasmic protein-tyrosine kinases implicated in signaling downstream from cytokines, growth factors and immune receptors. Fes/Fps/Fer contains three coiled-coil regions, an SH2 (Src-homology-2) and a TK (tyrosine kinase catalytic) domain signature. Members here include: Fps/Fes, Fer, Kin-31, and In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 90

>gnl|CDD|198218 cd10355, SH2_DAPP1_BAM32_like, Src homology 2 domain found in dual adaptor for phosphotyrosine and 3-phosphoinositides ( DAPP1)/B lymphocyte adaptor molecule of 32 kDa (Bam32)-like proteins

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 1  WFHGKISRETAES-LLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W+HG ++R  AE+ LL+   DG +L+R S      F + V  +  V+H+ V+Y       
Sbjct: 8  WYHGNLTRHAAEALLLSNGVDGSYLLRNSNEGTGLFSLSVRAKDSVKHFHVEYTGYSFKF 67

Query: 59 DDEEF 63
             EF
Sbjct: 68 GFNEF 72

DAPP1/Bam32 contains a putative myristoylation site at its N-terminus, followed by a SH2 domain, and a pleckstrin homology (PH) domain at its C-terminus. DAPP1 could potentially be recruited to the cell membrane by any of these domains. Its putative myristoylation site could facilitate the interaction of DAPP1 with the lipid bilayer. Its SH2 domain may also interact with phosphotyrosine residues on membrane-associated proteins such as activated tyrosine kinase receptors. And finally its PH domain exhibits a high-affinity interaction with the PtdIns(3,4,5)P(3) PtdIns(3,4)P(2) second messengers produced at the cell membrane following the activation of PI 3-kinases. DAPP1 is thought to interact with both tyrosine phosphorylated proteins and 3-phosphoinositides and therefore may play a role in regulating the location and/or activity of such proteins(s) in response to agonists that elevate PtdIns(3,4,5)P(3) and PtdIns(3,4)P(2). This protein is likely to play an important role in triggering signal transduction pathways that lie downstream from receptor tyrosine kinases and PI 3-kinase. It is likely that DAPP1 functions as an adaptor to recruit other proteins to the plasma membrane in response to extracellular signals. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 92

>gnl|CDD|198255 cd10392, SH2_SHF, Src homology 2 domain found in SH2 domain-containing adapter protein F (SHF)

 Score = 35.0 bits (80), Expect = 4e-04
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF 35
          W+HG ISR  AE+LL   ++  +LVR S     DF
Sbjct: 3  WYHGAISRTDAENLLRLCKEASYLVRNSETSKNDF 37

SHF is thought to play a role in PDGF-receptor signaling and regulation of apoptosis. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|199832 cd10417, SH2_SH2D7, Src homology 2 domain found in the SH2 domain containing protein 7 (SH2D7)

 Score = 35.3 bits (81), Expect = 4e-04
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES 28
          WFHG I+R+  E LL  K  G FL+R S
Sbjct: 9  WFHGFITRKQTEQLLRDKALGSFLIRLS 36

SH2D7 contains a single SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|198183 cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)

 Score = 34.6 bits (80), Expect = 9e-04
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)

Query: 1  WFHGKISRETAES-LLAPKEDGLFLVRES----TNFPQDFMCVCFESKVEHYRVKYKEA 54
          W+ G I R+ AE  L    +DG FLVR+S    ++ P   M V +  KV + ++++ E 
Sbjct: 13 WYAGNIDRKEAEEALRRSNKDGTFLVRDSSGKDSSQPYTLM-VLYNDKVYNIQIRFLEN 70

BLNK (also known as SLP-65 or BASH) is an important adaptor protein expressed in B-lineage cells. BLNK consists of a N-terminal sterile alpha motif (SAM) domain and a C-terminal SH2 domain. BLNK is a cytoplasmic protein, but a part of it is bound to the plasma membrane through an N-terminal leucine zipper motif and transiently bound to a cytoplasmic domain of Iga through its C-terminal SH2 domain upon B cell antigen receptor (BCR)-stimulation. A non-ITAM phosphotyrosine in Iga is necessary for the binding with the BLNK SH2 domain and/or for normal BLNK function in signaling and B cell activation. Upon phosphorylation BLNK binds Btk and PLCgamma2 through their SH2 domains and mediates PLCgamma2 activation by Btk. BLNK also binds other signaling molecules such as Vav, Grb2, Syk, and HPK1. BLNK has been shown to be necessary for BCR-mediated Ca2+ mobilization, for the activation of mitogen-activated protein kinases such as ERK, JNK, and p38 in a chicken B cell line DT40, and for activation of transcription factors such as NF-AT and NF-kappaB in human or mouse B cells. BLNK is involved in B cell development, B cell survival, activation, proliferation, and T-independent immune responses. BLNK is structurally homologous to SLP-76. SLP-76 and (linker for activation of T cells) LAT are adaptor/linker proteins in T cell antigen receptor activation and T cell development. BLNK interacts with many downstream signaling proteins that interact directly with both SLP-76 and LAT. New data suggest functional complementation of SLP-76 and LAT in T cell antigen receptor function with BLNK in BCR function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 121

>gnl|CDD|198275 cd10412, SH2_SH2B3, Src homology 2 (SH2) domain found in SH2B adapter proteins (SH2B1, SH2B2, SH2B3)

 Score = 34.1 bits (78), Expect = 9e-04
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 1  WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE 53
          WFHG ISR  A  L+    P   G+FLVR+S     ++ +   F+ + +H R+   E
Sbjct: 10 WFHGPISRVKAAQLVQLQGPDAHGVFLVRQSETRRGEYVLTFNFQGRAKHLRLSLTE 66

SH2B3 (Lnk), like other members of the SH2B adapter protein family, contains a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B3 negatively regulates lymphopoiesis and early hematopoiesis. The lnk-deficiency results in enhanced production of B cells, and expansion as well as enhanced function of hematopoietic stem cells (HSCs), demonstrating negative regulatory functions of Sh2b3/Lnk in cytokine signaling. Sh2b3/Lnk also functions in responses controlled by cell adhesion and in crosstalk between integrin- and cytokine-mediated signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198262 cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain found in Tec protein, Bmx

 Score = 33.8 bits (77), Expect = 0.001
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTN---FPQDFMCVCFESK---VEHYRV-KYK 52
          WF G ISR  +E LL  K ++G F+VR S+    +           K   V+HY V    
Sbjct: 8  WFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNA 67

Query: 53 EAHLTIDDEEFFENLAQLV 71
          E  L + +   F+++ +L+
Sbjct: 68 ENKLYLAENYCFDSIPKLI 86

A member of the Tec protein tyrosine kinase Bmx is expressed in the endothelium of large arteries, fetal endocardium, adult endocardium of the left ventricle, bone marrow, lung, testis, granulocytes, myeloid cell lines, and prostate cell lines. Bmx is involved in the regulation of Rho and serum response factor (SRF). Bmx has been shown to interact with PAK1, PTK2, PTPN21, and RUFY1. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains. It is not present in Txk and the type 1 splice form of the Drosophila homolog. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198228 cd10365, SH2_Src_Src, Src homology 2 (SH2) domain found in tyrosine kinase sarcoma (Src)

 Score = 33.5 bits (76), Expect = 0.002
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)

Query: 1  WFHGKISRETAESLLAPKED--GLFLVRESTNFPQDFMCVCFES-------KVEHYRV-K 50
          W+ GKI+R  +E LL   E+  G FLVRES      + C+            V+HY++ K
Sbjct: 5  WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAY-CLSVSDFDNAKGLNVKHYKIRK 63

Query: 51 YKEAHLTIDDEEFFENLAQLV 71
                 I     F +L QLV
Sbjct: 64 LDSGGFYITSRTQFNSLQQLV 84

Src is a member of the Src non-receptor type tyrosine kinase family of proteins. Src is thought to play a role in the regulation of embryonic development and cell growth. Members here include v-Src and c-Src. v-Src lacks the C-terminal inhibitory phosphorylation site and is therefore constitutively active as opposed to normal cellular src (c-Src) which is only activated under certain circumstances where it is required (e.g. growth factor signaling). v-Src is an oncogene whereas c-Src is a proto-oncogene. c-Src consists of three domains, an N-terminal SH3 domain, a central SH2 domain and a tyrosine kinase domain. The SH2 and SH3 domains work together in the auto-inhibition of the kinase domain. The phosphorylation of an inhibitory tyrosine near the c-terminus of the protein produces a binding site for the SH2 domain which then facilitates binding of the SH3 domain to a polyproline site within the linker between the SH2 domain and the kinase domain. Binding of the SH3 domain inactivates the enzyme. This allows for multiple mechanisms for c-Src activation: dephosphorylation of the C-terminal tyrosine by a protein tyrosine phosphatase, binding of the SH2 domain by a competitive phospho-tyrosine residue, or competitive binding of a polyproline binding site to the SH3 domain. Unlike most other Src members Src lacks cysteine residues in the SH4 domain that undergo palmitylation. Serine and threonine phosphorylation sites have also been identified in the unique domains of Src and are believed to modulate protein-protein interactions or regulate catalytic activity. Alternatively spliced forms of Src, which contain 6- or 11-amino acid insertions in the SH3 domain, are expressed in CNS neurons. c-Src has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198252 cd10389, SH2_SHB, Src homology 2 domain found in SH2 domain-containing adapter protein B (SHB)

 Score = 33.1 bits (75), Expect = 0.002
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF 35
          W+HG ISR  AE+LL   ++  +LVR S     D+
Sbjct: 3  WYHGAISRGDAENLLRLCKECSYLVRNSQTSKHDY 37

SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198250 cd10387, SH2_SOCS6, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 33.3 bits (76), Expect = 0.002
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTN 30
          W+ G I+R  AE  LA   DG FLVR+S++
Sbjct: 12 WYWGPITRWEAEGKLANVPDGSFLVRDSSD 41

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 100

>gnl|CDD|198213 cd10350, SH2_SH2D4A, Src homology 2 domain found in the SH2 domain containing protein 4A (SH2D4A)

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHY 47
          WFHG ++ + A  LL     G FL+R S       +    E   +H+
Sbjct: 9  WFHGILTLKKANELLLSTMPGSFLIRVSEKIKGYALSYLSEEGCKHF 55

SH2D4A contains a single SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198270 cd10407, SH2_Vav3, Src homology 2 (SH2) domain found in the Vav3 proteins

 Score = 33.1 bits (75), Expect = 0.003
 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G + R  AE+ L  + +  +LVR  T    ++ + + + ++V+H ++  ++    I 
Sbjct: 7  WYAGAMERLQAETELINRVNSTYLVRHRTKESGEYAISIKYNNEVKHIKILTRDGFFHIA 66

Query: 60 DEEFFENLAQLV 71
          +   F++L +LV
Sbjct: 67 ENRKFKSLMELV 78

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav3 preferentially activates RhoA, RhoG and, to a lesser extent, Rac1. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. VAV3 has been shown to interact with Grb2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198272 cd10409, SH2_Nck2, Src homology 2 (SH2) domain found in Nck

 Score = 32.7 bits (74), Expect = 0.003
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  WFHGKISRETAESLLAPKE-DGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W++G ++R  AE  L  +  +G FL+R+S + P DF + +    K +H++V+  +    I
Sbjct: 3  WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKAVGKNKHFKVQLVDNVYCI 62

Query: 59 DDEEF 63
              F
Sbjct: 63 GQRRF 67

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198202 cd10339, SH2_RIN_family, Src homology 2 (SH2) domain found in Ras and Rab interactor (RIN)-family

 Score = 32.5 bits (74), Expect = 0.004
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESK-----VEHYRVKYKEAH 55
          W   +++   A  +L  +  G FLVR+S       +C+          V  + +K     
Sbjct: 12 WLQLQLNAAEAAHMLQTEPPGTFLVRKSNTRQCQVLCMRLPEASGPAFVSEHYIKESPGG 71

Query: 56 LTIDDEEF-FENLAQLV 71
          ++++  E  F +L +L+
Sbjct: 72 VSLEGSELMFPDLFRLI 88

The RIN (AKA Ras interaction/interference) family is composed of RIN1, RIN2 and RIN3. These proteins have multifunctional domains including SH2 and proline-rich (PR) domains in the N-terminal region, and RIN-family homology (RH), VPS9 and Ras-association (RA) domains in the C-terminal region. RIN proteins function as Rab5-GEFs, and RIN3 specifically functions as a Rab31-GEF. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	71
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	99.95
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	99.95
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	99.94
KOG0790|consensus	600		99.82
KOG4637|consensus	464		99.8
KOG4226|consensus	379		99.8
KOG4278|consensus	1157		99.79
KOG4792|consensus	293		99.78
KOG2996|consensus	865		99.69
KOG1264|consensus	1267		99.64
KOG1264|consensus	1267		99.64
KOG0197|consensus	468		99.64
KOG4637|consensus	464		99.6
KOG1930|consensus	483		99.6
KOG0194|consensus	474		99.52
KOG0790|consensus	600		99.48
KOG3601|consensus	222		99.36
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	98.77
KOG3751|consensus	622		98.63
KOG4566|consensus	258		97.83
KOG3697|consensus	345		97.49
KOG1856|consensus	1299		97.36
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	97.1
PF02762	86	Cbl_N3: CBL proto-oncogene N-terminus, SH2-like do	96.77
KOG1856|consensus	1299		95.51
KOG3667|consensus	682		94.07
smart00557	93	IG_FLMN Filamin-type immunoglobulin domains. These	91.63
KOG1785|consensus	563		87.17
PF00630	101	Filamin: Filamin/ABP280 repeat; InterPro: IPR01786	86.34

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=99.95  E-value=4.7e-28  Score=120.07  Aligned_cols=71  Identities=45%  Similarity=0.781  Sum_probs=66.5

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCe-EEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-LTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~-~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|+. .++|+||||.|.+.++.| ||++.++.++||+|.+++++ |++.+...|+||.+||
T Consensus         1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV   74 (77)
T PF00017_consen    1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLV   74 (77)
T ss_dssp             TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHH
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHH
Confidence            99999999999999987 899999999999889999 99999999999999998764 8888878899999996

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>smart00252 SH2 Src homology 2 domains

Probab=99.95  E-value=3.4e-27  Score=118.59  Aligned_cols=71  Identities=45%  Similarity=0.784  Sum_probs=66.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|.+.++|+||||.|++.++.| ||++.++.++||+|...+ +.|.+.+...|+||.|||
T Consensus         3 w~~g~i~r~~Ae~lL~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI   75 (84)
T smart00252        3 WYHGFISREEAEKLLKNEGDGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELV   75 (84)
T ss_pred             eecccCCHHHHHHHHhcCCCcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHH
Confidence            99999999999999998889999999999888999 999999999999999886 789998778999999986

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=99.94  E-value=4.9e-26  Score=116.11  Aligned_cols=71  Identities=42%  Similarity=0.751  Sum_probs=65.2

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECC-CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDD-EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~-~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|++.++|+||||.|++.++.| ||++.++.++|++|...++++.+.. ...|+||.|||
T Consensus         2 w~~g~i~r~~Ae~~L~~~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv   74 (94)
T cd00173           2 WYHGPISREEAEELLKKKPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELI   74 (94)
T ss_pred             ccccCCCHHHHHHHHhcCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHH
Confidence            99999999999999999999999999999889999 9999999999999999877666654 68999999986

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>KOG0790|consensus

Probab=99.82  E-value=2.4e-20  Score=115.20  Aligned_cols=71  Identities=41%  Similarity=0.725  Sum_probs=66.7

Q ss_pred             CcccCCCHHHHHHhhC-CCCCceEEEEecCCCCCce-EEEEeCC---------eEEEEEEEeeCCeEEECCCCCcCChhH
Q psy12414          1 WFHGKISRETAESLLA-PKEDGLFLVRESTNFPQDF-MCVCFES---------KVEHYRVKYKEAHLTIDDEEFFENLAQ   69 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~-~~~~G~fliR~s~~~~~~~-Ls~~~~~---------~v~h~~I~~~~~~~~~~~~~~F~sl~~   69 (71)
                      ||||.++.++||.||. ....|+||||+|.+.||+| ||++.++         +|.|..|...++.|.+++...|.||.+
T Consensus       112 WfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F~sltd  191 (600)
T KOG0790|consen  112 WFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERFDSLTD  191 (600)
T ss_pred             hhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCCccccchHHH
Confidence            9999999999999995 5789999999999999999 9999854         899999999999999998999999999


Q ss_pred             hC
Q psy12414         70 LV   71 (71)
Q Consensus        70 Lv   71 (71)
                      ||
T Consensus       192 Li  193 (600)
T KOG0790|consen  192 LV  193 (600)
T ss_pred             HH
Confidence            86

>KOG4637|consensus

Probab=99.80  E-value=6.7e-20  Score=110.89  Aligned_cols=71  Identities=24%  Similarity=0.517  Sum_probs=68.1

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|+++...|.++|+|+||||+..+.+|.| |+++.++.++-++|.+.+|+|-+.+...|.|+++||
T Consensus        25 WYWgdisReev~~~L~d~PDGsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgKyGF~d~ltf~SVVelI   96 (464)
T KOG4637|consen   25 WYWGDISREEVNKKLRDQPDGSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGKYGFSDPLTFNSVVELI   96 (464)
T ss_pred             ccccccCHHHHHHHhcCCCCCcEEeeccccCCCceEEEEecCCccceeeeEEecCccCCCCchhhHHHHHHH
Confidence            99999999999999999999999999988899999 999999999999999999998888889999999986

>KOG4226|consensus

Probab=99.80  E-value=1.6e-19  Score=106.23  Aligned_cols=70  Identities=30%  Similarity=0.606  Sum_probs=66.3

Q ss_pred             CcccCCCHHHHHHhh-CCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L-~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||.|.|+|.+||.+| ....+|+||||+|++.||+| +|++..++-+||++...++-|+|+ ...|.+|.+||
T Consensus       283 WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq~~d~~ycIG-qRkF~tmd~Lv  354 (379)
T KOG4226|consen  283 WYYGNITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQLVDNVYCIG-QRKFHTMDELV  354 (379)
T ss_pred             ceeccccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEEEecceEEec-cceeccHHHHH
Confidence            999999999999999 56899999999999999999 999999999999999999999998 58899999986

>KOG4278|consensus

Probab=99.79  E-value=1.7e-19  Score=115.92  Aligned_cols=71  Identities=38%  Similarity=0.757  Sum_probs=66.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.++|..||.+|.+.-.|+||||+|++.+|.| +|+++.+.|.||+|.-+ +++.++.....|.||.|||
T Consensus       154 WYHGpvSRsaaEy~LsSgInGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~EsrF~TLaELV  226 (1157)
T KOG4278|consen  154 WYHGPVSRSAAEYILSSGINGSFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQESRFRTLAELV  226 (1157)
T ss_pred             cccCccccchhhhhhhcCcccceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEeehhhhhHHHHHH
Confidence            99999999999999999999999999999999999 99999999999999876 5788887778999999996

>KOG4792|consensus

Probab=99.78  E-value=8.2e-19  Score=100.85  Aligned_cols=70  Identities=36%  Similarity=0.713  Sum_probs=62.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC--------CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE--------AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~--------~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||+|.|+|+||..+|+.+..|.||+|+|.+.||.| |||+.+..|.||.|.+..        ..+.|+ +..|++|+.|+
T Consensus        13 wYfg~mSRqeA~~lL~~~r~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIg-dQ~Fd~lPaLL   91 (293)
T KOG4792|consen   13 WYFGPMSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIG-DQEFDSLPALL   91 (293)
T ss_pred             eecCcccHHHHHHHhcCcceeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeec-cccccchHHHH
Confidence            99999999999999998889999999999999999 999999999999998721        268887 57899999874

>KOG2996|consensus

Probab=99.69  E-value=4.7e-17  Score=103.35  Aligned_cols=71  Identities=28%  Similarity=0.656  Sum_probs=68.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||.|.|-|..||..|++.++|+||||.+....+.| +|+++++.|+|++|...+|.+.|.+...|.|+.|||
T Consensus       687 WyaG~MERaqaes~Lk~~~ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~ELV  758 (865)
T KOG2996|consen  687 WYAGEMERAQAESTLKNRPNGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVELV  758 (865)
T ss_pred             hhcchHhhhhhhhHhhcCCCceEEEEecccchhheeEEEEeccccceEEEEecCCeEEechhhhhhhHHHHH
Confidence            99999999999999999999999999998888999 999999999999999999999999999999999986

>KOG1264|consensus

Probab=99.64  E-value=3.4e-16  Score=102.27  Aligned_cols=71  Identities=39%  Similarity=0.724  Sum_probs=64.0

Q ss_pred             CcccCCC-HHHHHHhhC------CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee--CC--eEEECCCCCcCChh
Q psy12414          1 WFHGKIS-RETAESLLA------PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK--EA--HLTIDDEEFFENLA   68 (71)
Q Consensus         1 w~~g~i~-r~~a~~~L~------~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~--~~--~~~~~~~~~F~sl~   68 (71)
                      ||||.+. |.+|+++|+      ..++|+||||+|..-.|+| ||+..+++|.|++|.-.  +|  +|++.++..|+||-
T Consensus       536 WFHgkle~R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY  615 (1267)
T KOG1264|consen  536 WFHGKLEGRTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLY  615 (1267)
T ss_pred             hhhcccccchHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHH
Confidence            9999999 999999986      2479999999999999999 99999999999999854  33  79999899999999


Q ss_pred             HhC
Q psy12414         69 QLV   71 (71)
Q Consensus        69 ~Lv   71 (71)
                      +||
T Consensus       616 ~LI  618 (1267)
T KOG1264|consen  616 ALI  618 (1267)
T ss_pred             HHH
Confidence            886

>KOG1264|consensus

Probab=99.64  E-value=3.9e-16  Score=102.01  Aligned_cols=69  Identities=30%  Similarity=0.641  Sum_probs=61.1

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      |||...+|++||++|.. +.+|+|||| +...++.| ||++.+++++||+|.+++..|.++. ..|.||++||
T Consensus       650 W~~as~treqAE~mL~rvp~DGaFLiR-~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t-~~FesLv~lv  720 (1267)
T KOG1264|consen  650 WYHASLTREQAEDMLMRVPRDGAFLIR-KREGSNSYAISFRARGKIKHCRINRDGRHFVLGT-SAFESLVELV  720 (1267)
T ss_pred             cccccccHHHHHHHHhhCccCcceEEE-eccCCceEEEEEEEcCcEeEEEEccCceEEEecc-HHHHHHHHHH
Confidence            99999999999999975 677999999 44567889 9999999999999998888888874 5699999986

>KOG0197|consensus

Probab=99.64  E-value=4.7e-16  Score=97.02  Aligned_cols=71  Identities=48%  Similarity=0.768  Sum_probs=61.6

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCC------eEEEEEEEeeC-CeEE--ECCCCCcCChh
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFES------KVEHYRVKYKE-AHLT--IDDEEFFENLA   68 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~------~v~h~~I~~~~-~~~~--~~~~~~F~sl~   68 (71)
                      ||+|.|+|++||+.|..  ++.|+||||+|++.++.| ||++...      .|+||+|...+ +++.  +.....|++|.
T Consensus        83 Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~  162 (468)
T KOG0197|consen   83 WFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSSLQ  162 (468)
T ss_pred             chhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHHhhhhHH
Confidence            99999999999976654  466999999999999999 9999855      89999999874 5566  88779999999


Q ss_pred             HhC
Q psy12414         69 QLV   71 (71)
Q Consensus        69 ~Lv   71 (71)
                      +||
T Consensus       163 ~lv  165 (468)
T KOG0197|consen  163 QLV  165 (468)
T ss_pred             HHH
Confidence            986

>KOG4637|consensus

Probab=99.60  E-value=8.6e-16  Score=93.32  Aligned_cols=70  Identities=29%  Similarity=0.498  Sum_probs=61.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC-CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE-EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~-~~F~sl~~Lv   71 (71)
                      |+.+.+.|..||.+|+.+++|+||||.| ++.|+| +||..++.|+|+.|..+..+|-+... ..+.||.+||
T Consensus       334 w~~~~a~r~kAe~llrg~~dGtFLIR~s-s~~g~yalSV~~~~~V~HClIy~tatG~GFa~pyn~y~tlk~lV  405 (464)
T KOG4637|consen  334 WRVRDANRDKAEELLRGKPDGTFLIRES-SKGGCYALSVVHDGEVKHCLIYQTATGFGFAEPYNLYSTLKELV  405 (464)
T ss_pred             hHHhhhhHHHHHHHhcCCCCCeEEEeec-cCCCceEEEEEECCceeeeEEeeccccccccchhHHHHHHHHHH
Confidence            8889999999999999999999999996 568999 99999999999999999888887654 5577777775

>KOG1930|consensus

Probab=99.60  E-value=1.5e-15  Score=93.18  Aligned_cols=71  Identities=32%  Similarity=0.609  Sum_probs=61.7

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEe----------C-----CeEEEEEEEeeCCeEEEC---CC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCF----------E-----SKVEHYRVKYKEAHLTID---DE   61 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~----------~-----~~v~h~~I~~~~~~~~~~---~~   61 (71)
                      ||...|+|++|..||+++++|+||||+|.+.+|.| |.++.          +     .-|+||.|.....+..+.   +.
T Consensus       214 WYKP~isREQAIalLrdkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGVkLKGC~nE  293 (483)
T KOG1930|consen  214 WYKPNISREQAIALLRDKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGVKLKGCDNE  293 (483)
T ss_pred             ccCCCCCHHHHHHHhhcCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCceeccCCCCC
Confidence            99999999999999999999999999999999999 99885          1     348999999877666663   34


Q ss_pred             CCcCChhHhC
Q psy12414         62 EFFENLAQLV   71 (71)
Q Consensus        62 ~~F~sl~~Lv   71 (71)
                      ..|.||..||
T Consensus       294 P~FGSLSALV  303 (483)
T KOG1930|consen  294 PVFGSLSALV  303 (483)
T ss_pred             CccchhHHHH
Confidence            7899998886

>KOG0194|consensus

Probab=99.52  E-value=9.7e-14  Score=87.24  Aligned_cols=69  Identities=35%  Similarity=0.605  Sum_probs=59.5

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCc---e--EEEEeC--CeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQD---F--MCVCFE--SKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~---~--Ls~~~~--~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.+.|++|+.+|.  .+|+||||.+...++.   +  ||+...  ..++||.|.+.++.++......|+|+.+||
T Consensus        51 ~yHG~l~red~~~lL~--~~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~li  126 (474)
T KOG0194|consen   51 YYHGLLPREDAEKLLK--NDGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISELV  126 (474)
T ss_pred             cccccccHhHHHHHhC--CCCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHHH
Confidence            9999999999999999  6999999999876542   3  788874  789999999988877777779999999985

>KOG0790|consensus

Probab=99.48  E-value=5.3e-14  Score=87.50  Aligned_cols=71  Identities=38%  Similarity=0.574  Sum_probs=66.6

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      |||..++..+||.||+. ..+|+||.|.|+++|+.| |+++.++.+.|.+|...++.|.+-++..|.++.|||
T Consensus         6 wfh~~~~g~~ae~Ll~~~g~dgsfl~r~s~sNp~~fsl~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELv   78 (600)
T KOG0790|consen    6 WFHPDLSGVEAETLLKERGVDGSFLARPSESNPGDFSLSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELV   78 (600)
T ss_pred             hcCCCccchhHHHHHHHhccccchhhccccCCCcceeEEEEeCCceEEEEEeecCccccccCCccccchHHHH
Confidence            99999999999999974 689999999999999999 999999999999999888888888889999999986

>KOG3601|consensus

Probab=99.36  E-value=1e-13  Score=78.94  Aligned_cols=70  Identities=39%  Similarity=0.582  Sum_probs=61.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||+|.++|..||++|....+|+||+|.+++.|+.| ++++....|.|+++.+.. ++|++- ...|.++.+|+
T Consensus        60 wve~~i~r~~ae~~l~~~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw-~skfnslnplv  131 (222)
T KOG3601|consen   60 WVEGLIPRPLAEDLLSKKRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLW-SSKFNSLNPLV  131 (222)
T ss_pred             ceecccccchhhhhhhccCcchhhhhhhhcCcccccccccCCCCceeccccccCccccccc-hhhccCCCCCc
Confidence            89999999999999988999999999999999999 999999999999999874 566654 46688876654

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=98.77  E-value=9.7e-08  Score=55.48  Aligned_cols=66  Identities=24%  Similarity=0.399  Sum_probs=48.9

Q ss_pred             CCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEe-CCeEEEEEEEeeC--------CeEEECCCCCcCChhHhC
Q psy12414          5 KISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCF-ESKVEHYRVKYKE--------AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         5 ~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~-~~~v~h~~I~~~~--------~~~~~~~~~~F~sl~~Lv   71 (71)
                      +++-.+|++.|.+.+.|.++||+|+...... ++++. ++...|+-|.-.+        ..+.++ ...|.+|.|||
T Consensus        43 n~~~~qAe~~L~~~~~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~-~~~yeDLDEii  118 (220)
T PF14633_consen   43 NFNYKQAEEYLADQDVGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIG-GEEYEDLDEII  118 (220)
T ss_dssp             SS-HHHHHHHHCCS-TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEET-TEEESSHHHHH
T ss_pred             CCCHHHHHHHHhcCCCCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEEC-CeEECCHHHHH
Confidence            7899999999999999999999997655555 77776 6778899997542        245665 67899999985

>KOG3751|consensus

Probab=98.63  E-value=3.1e-08  Score=63.12  Aligned_cols=71  Identities=45%  Similarity=0.823  Sum_probs=57.4

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC--Ce--EEECC-CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE--AH--LTIDD-EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~--~~--~~~~~-~~~F~sl~~Lv   71 (71)
                      |||+.|+++++..++++  -.+|-|++|.+.++|..| +++....+|+||+|...+  +.  +.... ...|.++.+||
T Consensus       521 ~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~sd~~ql~  599 (622)
T KOG3751|consen  521 WFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKFSDLIQLV  599 (622)
T ss_pred             CcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCcccccccccc
Confidence            99999999999998875  378999999999999999 999999999999998763  32  33322 26677776654

>KOG4566|consensus

Probab=97.83  E-value=3.4e-05  Score=45.91  Aligned_cols=58  Identities=28%  Similarity=0.470  Sum_probs=46.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEE
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI   58 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~   58 (71)
                      ||+|.++..+|+..|...+.|+|++|+|...+-.+ |+++.....+.-+|.+.++.+..
T Consensus        54 ~~w~~~~~~~~~~~l~~~p~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~~sfr~  112 (258)
T KOG4566|consen   54 HYWGLETANEAELCLGQEPRGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQDSSFRL  112 (258)
T ss_pred             cccccccchhHHHhhcCCCccceeeecCcCccccceeEeeeccCCCCccccccccceec
Confidence            78999999999999988899999999997766666 99988766666667665554444

>KOG3697|consensus

Probab=97.49  E-value=0.00013  Score=44.15  Aligned_cols=68  Identities=13%  Similarity=0.191  Sum_probs=48.6

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCC-----------------------------------------------CCC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTN-----------------------------------------------FPQ   33 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~-----------------------------------------------~~~   33 (71)
                      |++|.++++.+++.|.  ++|.|++|.+..                                               .+|
T Consensus       203 p~~g~l~~~~~q~~l~--~~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~~~~~~~g  280 (345)
T KOG3697|consen  203 PPGGFLDTRLKQRPLA--PDAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLFDETTTPG  280 (345)
T ss_pred             CCCCccchhhhhccCC--cccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhccccCCCc
Confidence            8999999999999998  888888886544                                               355


Q ss_pred             ce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414         34 DF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus        34 ~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      .| |+=..+++.+|..+.--+|... .....|+|+..||
T Consensus       281 qyvltgl~~~~~khlllvdpegvvr-tkd~~fdsishli  318 (345)
T KOG3697|consen  281 QYVLTGLQSGQPKHLLLVDPEGVVR-TKDRRFDSISHLI  318 (345)
T ss_pred             cEEEecccCCCcceEEEECCcccee-cccchhhHHHHHH
Confidence            56 6555567777777643333322 3357899988775

>KOG1856|consensus

Probab=97.36  E-value=0.00021  Score=49.67  Aligned_cols=67  Identities=21%  Similarity=0.358  Sum_probs=49.5

Q ss_pred             CCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEe-CCeEEEEEEEee--CCeEEEC-----CCCCcCChhHhC
Q psy12414          5 KISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCF-ESKVEHYRVKYK--EAHLTID-----DEEFFENLAQLV   71 (71)
Q Consensus         5 ~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~-~~~v~h~~I~~~--~~~~~~~-----~~~~F~sl~~Lv   71 (71)
                      +++-++|+.+|.....|.++||+|+...... ++++. ++...|+.|.-.  ++.|.++     ++..|..|.|+|
T Consensus      1113 n~n~eQAe~yL~~~d~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e~feDLDEiI 1188 (1299)
T KOG1856|consen 1113 NLNAEQAEAYLSDMDQGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGEEFEDLDEII 1188 (1299)
T ss_pred             CCCHHHHHHHHHhcccccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCcccccHHHHH
Confidence            7889999999998899999999997655555 66665 466678888643  2233332     357899999875

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=97.10  E-value=0.00044  Score=40.45  Aligned_cols=64  Identities=19%  Similarity=0.242  Sum_probs=43.5

Q ss_pred             CHHHHHHhhCC-----CCCceEEEEecCCCCCce-EEEEeCCeEEEEE--EEeeCCeEEECCCCCcCChhHhC
Q psy12414          7 SRETAESLLAP-----KEDGLFLVRESTNFPQDF-MCVCFESKVEHYR--VKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         7 ~r~~a~~~L~~-----~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~--I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      +++++++.|..     +.--.|.+..+...||.| |+...+...+|..  |.-...+|.+. ...|++|.+|+
T Consensus       142 ~~~e~e~~L~~~k~~nP~~i~Y~f~~~~~~PG~F~L~y~~~~~~~~~~~~v~V~p~Gf~~r-~~~f~~~~~L~  213 (220)
T PF14633_consen  142 TKEEVEEWLKEEKKANPKRIPYAFCISKEHPGYFILSYKPNKNPRHEYWPVKVTPDGFRFR-KQVFPSLDRLI  213 (220)
T ss_dssp             -CCCCHHHHHCHHHHSTTS-EEEEEE-TTSTTEEEEEEESSTTS-EEEEEEEE-SSSEEET-TEEESSHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCceEEEEECCCCCCEEEEEEEcCCCCceEEeeEEEecCcEEEe-cccCCCHHHHH
Confidence            35566776642     233578888888899999 9998855544443  77778888886 57899999885

>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface

Probab=96.77  E-value=0.02  Score=28.45  Aligned_cols=40  Identities=10%  Similarity=0.198  Sum_probs=31.6

Q ss_pred             cccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeC
Q psy12414          2 FHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFE   41 (71)
Q Consensus         2 ~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~   41 (71)
                      |...|+=+|+...|+.  ..+|+|+.|-|-++-|.+ +-....
T Consensus         5 Y~AFlTYdevk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~   47 (86)
T PF02762_consen    5 YMAFLTYDEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQ   47 (86)
T ss_dssp             BETT--HHHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEET
T ss_pred             eeEEEeHHHHHHHHHHHhCCcccEEEeeccccccceeEEEEcC
Confidence            4557888999999973  688999999999999999 877663

The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....

>KOG1856|consensus

Probab=95.51  E-value=0.079  Score=37.73  Aligned_cols=64  Identities=23%  Similarity=0.327  Sum_probs=50.2

Q ss_pred             CHHHHHHhhCC--CCC---ceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          7 SRETAESLLAP--KED---GLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         7 ~r~~a~~~L~~--~~~---G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ++++.+++|..  +.+   --|....|...||.| |+.+.+..++|--|.-...+|.+. +..|+||.+|.
T Consensus      1212 t~~~~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~~k~~heyv~v~p~g~~~r-g~~f~tld~L~ 1281 (1299)
T KOG1856|consen 1212 TKKEVEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPSSKPRHEYVKVVPEGFRFR-GQNFGTLDELC 1281 (1299)
T ss_pred             CHHHHHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccCCCccceeEEEcccceEEe-cccchhHHHHH
Confidence            47888888862  222   345566788899999 999999999999988888888876 47799998873

>KOG3667|consensus

Probab=94.07  E-value=0.095  Score=35.34  Aligned_cols=48  Identities=23%  Similarity=0.268  Sum_probs=36.0

Q ss_pred             ccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEe-CCeEEEEEEE
Q psy12414          3 HGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCF-ESKVEHYRVK   50 (71)
Q Consensus         3 ~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~-~~~v~h~~I~   50 (71)
                      .|.++++.+.++|...++|+|++|.|++.-|.. +.... .....|+.|.
T Consensus       567 mgfinkq~~~~ll~~~~~GtflLrfs~S~~GgiT~~~v~~~~~~~~~~i~  616 (682)
T KOG3667|consen  567 MGFINKQQERALLMTKPDGTFLLRFSASEEGGITIAWVEDQKQNLIMMIM  616 (682)
T ss_pred             eeecchhhhhhhhhcCCCCCceeeeeccccCceeEEecccccccceeEec
Confidence            477899999999989999999999998877765 44333 2223577776

>smart00557 IG_FLMN Filamin-type immunoglobulin domains

Probab=91.63  E-value=0.35  Score=24.32  Aligned_cols=27  Identities=26%  Similarity=0.447  Sum_probs=21.3

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .+..+|+|.+...+..+|.| |++..++
T Consensus        51 ~d~~dGty~v~y~P~~~G~~~i~V~~~g   78 (93)
T smart00557       51 KDNGDGTYTVSYTPTEPGDYTVTVKFGG   78 (93)
T ss_pred             EeCCCCEEEEEEEeCCCEeEEEEEEECC
Confidence            45677888888888888888 8888765

These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).

>KOG1785|consensus

Probab=87.17  E-value=1  Score=29.12  Aligned_cols=39  Identities=13%  Similarity=0.215  Sum_probs=31.7

Q ss_pred             cccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe
Q psy12414          2 FHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF   40 (71)
Q Consensus         2 ~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~   40 (71)
                      |...++-+|+.+.|+.  ..+|+|+.|-|-+..|.+ +-...
T Consensus       259 YmAFLTYDEVk~RLqk~~~KpGSYIFRlSCTRlGQWAIGYVt  300 (563)
T KOG1785|consen  259 YMAFLTYDEVKARLQKYIKKPGSYIFRLSCTRLGQWAIGYVT  300 (563)
T ss_pred             eeEEeeHHHHHHHHHHHhcCCCceEEeeccCcccceeEEEEc
Confidence            3445677888888863  589999999999999999 87766

>PF00630 Filamin: Filamin/ABP280 repeat; InterPro: IPR017868 The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod

Probab=86.34  E-value=1.2  Score=22.27  Aligned_cols=26  Identities=19%  Similarity=0.379  Sum_probs=17.8

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +..+|.|.+......+|.| |+|..++
T Consensus        66 ~~~~G~y~v~y~p~~~G~y~i~V~~~g   92 (101)
T PF00630_consen   66 DNGDGTYTVSYTPTEPGKYKISVKING   92 (101)
T ss_dssp             EESSSEEEEEEEESSSEEEEEEEEESS
T ss_pred             ECCCCEEEEEEEeCccEeEEEEEEECC
Confidence            3466777777777777777 7776654

Whereas their actin-binding domains consist of two calponin homology domains (see IPR001715 from INTERPRO), their rods fall into three families. The rod domain of the family including the Dictyostelium discoideum (Slime mould) gelation factor (ABP120) and human filamin (ABP280) is constructed from tandem repeats of a 100-residue motif that is glycine and proline rich []. The gelation factor's rod contains 6 copies of the repeat, whereas filamin has a rod constructed from 24 repeats. The resolution of the 3D structure of rod repeats from the gelation factor has shown that they consist of a beta-sandwich, formed by two beta-sheets arranged in an immunoglobulin-like fold [, ]. Because conserved residues that form the core of the repeats are preserved in filamin, the repeat structure should be common to the members of the gelation factor/filamin family. The head to tail homodimerisation is crucial to the function of the ABP120 and ABP280 proteins. This interaction involves a small portion at the distal end of the rod domains. For the gelation factor it has been shown that the carboxy-terminal repeat 6 dimerises through a double edge-to-edge extension of the beta-sheet and that repeat 5 contributes to dimerisation to some extent [, , ].; PDB: 2DI9_A 2EEC_A 2DIC_A 2EEA_A 2DMC_A 2EE9_A 2D7O_A 2D7N_A 2K7P_A 2NQC_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	71
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-22
3eaz_A	106	Crystal Structure Of Sh2 Domain Of Human Csk (Carbo		3e-22
3eac_A	106	Crystal Structure Of Sh2 Domain Of Human Csk (Carbo		5e-22
1jwo_A	97	Crystal Structure Analysis Of The Sh2 Domain Of The		9e-17
3us4_A	98	Crystal Structure Of A Sh2 Domain Of A Megakaryocyt		3e-16
1csy_A	112	Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed		4e-10
3t04_A	123	Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN C		9e-10
1ab2_A	109	Three-Dimensional Solution Structure Of The Src Hom		1e-09
3k2m_A	112	Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN CO		1e-09
2abl_A	163	Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine K		1e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-09
4fl3_A	635	Structural And Biophysical Characterization Of The		1e-09
1a81_A	254	Crystal Structure Of The Tandem Sh2 Domain Of The S		2e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-09
1mw4_A	120	Solution Structure Of The Human Grb7-Sh2 Domain In		3e-09
3pqz_A	117	Grb7 Sh2 With Peptide Length = 117		3e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-08
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-08
2ecd_A	119	Solution Structure Of The Human Abl2 Sh2 Domain Len		2e-08
1jyq_A	96	Xray Structure Of Grb2 Sh2 Domain Complexed With A		1e-06
1ghu_A	107	Nmr Solution Structure Of Growth Factor Receptor-Bo		1e-06
1bm2_A	117	Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acet		2e-06
1bmb_A	123	Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-9		2e-06
1fyr_A	114	Dimer Formation Through Domain Swapping In The Crys		2e-06
2aoa_A	99	Crystal Structures Of A High-affinity Macrocyclic P		2e-06
1fhs_A	112	The Three-Dimensional Solution Structure Of The Src		2e-06
3ove_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		2e-06
3imd_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		2e-06
1x0n_A	104	Nmr Structure Of Growth Factor Receptor Binding Pro		2e-06
3n84_A	112	Crystal Structure Of The Grb2 Sh2 Domain In Complex		2e-06
2h46_E	116	Native Domain-Swapped Dimer Crystal Structure Of Th		2e-06
1zfp_E	98	Growth Factor Receptor Binding Protein Sh2 Domain C		2e-06
1tze_E	98	Signal Transduction Adaptor Growth Factor, Grb2 Sh2		2e-06
3mxc_A	101	Structures Of Grb2-Sh2 Domain And Aicd Peptide Comp		2e-06
1cj1_A	96	Growth Factor Receptor Binding Protein Sh2 Domain (		2e-06
1gri_A	217	Grb2 Length = 217		2e-06
2crh_A	138	Solution Structure Of The Sh2 Domain Of Human Proto		3e-06
2lct_A	107	Solution Structure Of The Vav1 Sh2 Domain Complexed		3e-06
2eo3_A	111	Solution Structure Of The Sh2 Domain From Human Crk		3e-06
2lqn_A	303	Solution Structure Of Crkl Length = 303		4e-06
2lqw_A	303	Solution Structure Of Phosphorylated Crkl Length =		4e-06
2shp_A	525	Tyrosine Phosphatase Shp-2 Length = 525		4e-06
2eyv_A	124	Sh2 Domain Of Ct10-Regulated Kinase Length = 124		5e-06
1r1p_A	100	Structural Basis For Differential Recognition Of Ty		5e-06
1ju5_A	109	Ternary Complex Of An Crk Sh2 Domain, Crk-Derived P		6e-06
2eyy_A	204	Ct10-Regulated Kinase Isoform I Length = 204		6e-06
1mil_A	104	Transforming Protein Length = 104		9e-06
1d4t_A	104	Crystal Structure Of The Xlp Protein Sap In Complex		1e-05
1nrv_A	105	Crystal Structure Of The Sh2 Domain Of Grb10 Length		1e-05
3m7f_A	108	Crystal Structure Of The Nedd4 C2GRB10 SH2 COMPLEX		1e-05
2aug_A	126	Crystal Structure Of The Grb14 Sh2 Domain Length =		1e-05
1ka6_A	128	SapSH2D1A BOUND TO PEPTIDE N-Py Length = 128		1e-05
2eyz_A	304	Ct10-Regulated Kinase Isoform Ii Length = 304		2e-05
1tce_A	107	Solution Nmr Structure Of The Shc Sh2 Domain Comple		2e-05
2dvj_A	230	Phosphorylated Crk-Ii Length = 230		2e-05
1x6c_A	118	Solution Structures Of The Sh2 Domain Of Human Prot		3e-05
2dx0_A	138	Crystal Structure Of The N-Terminal Sh2 Domain Of M		5e-05
2ci8_A	99	Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomple		9e-05
2ci9_A	102	Nck1 Sh2-Domain In Complex With A Dodecaphosphopept		9e-05
3cxl_A	463	Crystal Structure Of Human Chimerin 1 (Chn1) Length		1e-04
2b3o_A	532	Crystal Structure Of Human Tyrosine Phosphatase Shp		1e-04
3ps5_A	595	Crystal Structure Of The Full-Length Human Protein		2e-04
2eob_A	124	Solution Structure Of The Second Sh2 Domain From Ra		2e-04
1rqq_C	114	Crystal Structure Of The Insulin Receptor Kinase In		3e-04
1rpy_A	114	Crystal Structure Of The Dimeric Sh2 Domain Of Aps		3e-04
2kk6_A	116	Solution Structure Of Sh2 Domain Of Proto-Oncogene		4e-04
2dlz_A	118	Solution Structure Of The Sh2 Domain Of Human Prote		6e-04
2lnw_A	122	Identification And Structural Basis For A Novel Int		6e-04
2dly_A	121	Solution Structure Of The Sh2 Domain Of Murine Fyn-		7e-04

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score =  100 bits (249), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct: 82  WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 141
Query: 60  DEEFFENLAQLV 71
           +E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153

>pdb|3EAZ|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl- Terminal Src Kinase), C122s Mutant Length = 106

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct: 10 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSID 69
Query: 60 DEEFFENLAQLV 71
          +E +FENL QLV
Sbjct: 70 EEVYFENLMQLV 81

>pdb|3EAC|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl- Terminal Src Kinase), Oxidized Form Length = 106

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct: 10 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSID 69
Query: 60 DEEFFENLAQLV 71
          +E +FENL QLV
Sbjct: 70 EEVYFENLMQLV 81

>pdb|1JWO|A Chain A, Crystal Structure Analysis Of The Sh2 Domain Of The Csk Homologous Kinase Chk Length = 97

Iteration: 1
 Score = 81.6 bits (200), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKIS + A   L P EDGLFLVRES   P D+ +CV F   V HYRV +++ HLTID
Sbjct: 6  WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 65
Query: 60 DEEFFENLAQLV 71
          +  FF NL  +V
Sbjct: 66 EAVFFCNLMDMV 77

>pdb|3US4|A Chain A, Crystal Structure Of A Sh2 Domain Of A Megakaryocyte-Associated Tyrosine Kinase (Matk) From Homo Sapiens At 1.50 A Resolution Length = 98

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKIS + A   L P EDGLFLVRES   P D+ +CV F   V HYRV +++ HLTID
Sbjct: 7  WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 66
Query: 60 DEEFFENLAQLV 71
          +  FF NL   V
Sbjct: 67 EAVFFCNLXDXV 78

>pdb|1CSY|A Chain A, Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed With A Phosphopeptidefrom The Gamma Chain Of The High Affinity Immunoglobin G Receptor, Nmr Length = 112

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 1  WFHGKISRETAES--LLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRV-KYKEAHLT 57
          WFHGKISRE +E   L+  K +G FL+R   N     +C+  E KV HYR+ K K   L+
Sbjct: 15 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLS 74
Query: 58 IDDEEFFENLAQLV 71
          I + + F+ L QLV
Sbjct: 75 IPEGKKFDTLWQLV 88

>pdb|3T04|A Chain A, Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN COMPLEX Length = 123

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVKY-KEAHLTI 58
          W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  L +
Sbjct: 18 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 77
Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 78 SSESRFNTLAELV 90

>pdb|1AB2|A Chain A, Three-Dimensional Solution Structure Of The Src Homology 2 Domain Of C-Abl Length = 109

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVKY-KEAHLTI 58
          W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  L +
Sbjct: 11 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 70
Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 71 SSESRFNTLAELV 83

>pdb|3K2M|A Chain A, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX Length = 112

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVKY-KEAHLTI 58
          W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  L +
Sbjct: 7  WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 66
Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 67 SSESRFNTLAELV 79

>pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase Length = 163

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVKY-KEAHLTI 58
           W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  L +
Sbjct: 72  WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 131
Query: 59  DDEEFFENLAQLV 71
             E  F  LA+LV
Sbjct: 132 SSESRFNTLAELV 144

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 1   WFHGKISRETAES--LLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRV-KYKEAHLT 57
           WFHGKISRE +E   L+  K +G FL+R   N     +C+  E KV HYR+ K K   L+
Sbjct: 169 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLS 228
Query: 58  IDDEEFFENLAQLV 71
           I + + F+ L QLV
Sbjct: 229 IPEGKKFDTLWQLV 242

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 1   WFHGKISRETAES--LLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRV-KYKEAHLT 57
           WFHGKISRE +E   L+  K +G FL+R   N     +C+  E KV HYR+ K K   L+
Sbjct: 168 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLS 227
Query: 58  IDDEEFFENLAQLV 71
           I + + F+ L QLV
Sbjct: 228 IPEGKKFDTLWQLV 241

>pdb|1A81|A Chain A, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam Length = 254

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 1   WFHGKISRETAES--LLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRV-KYKEAHLT 57
           WFHGKISRE +E   L+  K +G FL+R   N     +C+  E KV HYR+ K K   L+
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLS 219
Query: 58  IDDEEFFENLAQLV 71
           I + + F+ L QLV
Sbjct: 220 IPEGKKFDTLWQLV 233

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVKY-KEAHLTI 58
           W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  L +
Sbjct: 146 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 205
Query: 59  DDEEFFENLAQLV 71
             E  F  LA+LV
Sbjct: 206 SSESRFNTLAELV 218

>pdb|1MW4|A Chain A, Solution Structure Of The Human Grb7-Sh2 Domain In Complex With A 10 Amino Acid Peptide Py1139 Length = 120

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE---- 53
          WFHG+ISRE ++ L+  +   DGLFLVRES   PQ F + +C   KV+HY +   E    
Sbjct: 19 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 78
Query: 54 AHLTIDDEEF-FENLAQLV 71
           + ++DD +  F +L QLV
Sbjct: 79 LYFSMDDGQTRFTDLLQLV 97

>pdb|3PQZ|A Chain A, Grb7 Sh2 With Peptide Length = 117

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE---- 53
          WFHG+ISRE ++ L+  +   DGLFLVRES   PQ F + +C   KV+HY +   E    
Sbjct: 16 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 75
Query: 54 AHLTIDDEEF-FENLAQLV 71
           + ++DD +  F +L QLV
Sbjct: 76 LYFSMDDGQTRFTDLLQLV 94

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVKY-KEAHLTI 58
           W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  L +
Sbjct: 107 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 166
Query: 59  DDEEFFENLAQLV 71
             E  F  LA+LV
Sbjct: 167 SSESRFNTLAELV 179

>pdb|2ECD|A Chain A, Solution Structure Of The Human Abl2 Sh2 Domain Length = 119

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFP-QDFMCVCFESKVEHYRVK-YKEAHLTI 58
          W+HG +SR  AE LL+   +G FLVRES + P Q  + + +E +V HYR+    +  + +
Sbjct: 18 WYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYV 77
Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 78 TAESRFSTLAELV 90

>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly Affine Phospho Peptide Length = 96

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 55

>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound Protein 2 (Grb2) Sh2 Domain, 24 Structures Length = 107

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 3  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 53

>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acetyl-L-Thi Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl] (Pkf273-791) Length = 117

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 14 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 64

>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974) Length = 123

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 15 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 65

>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal Structure Of The Grb2-Sh2 Ac-Pyvnv Complex Length = 114

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 13 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 63

>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic Peptide Mimetic In Complex With The Grb2 Sh2 Domain Length = 99

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 6  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 56

>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src Homology Domain-2 Of The Growth Factor Receptor Bound Protein-2, Nmr, 18 Structures Length = 112

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 9  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 59

>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Pyxn- Derived Tripeptide Length = 117

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 8  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 58

>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic Length = 117

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 8  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 58

>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein Sh2 Domain Complexed With The Inhibitor Length = 104

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 55

>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A 23-Membered Macrocyclic Ligand Having The Sequence Pyvnvp Length = 112

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 9  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 59

>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The Grb2 Sh2 Domain Length = 116

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 8  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 58

>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain Complexed With A Phosphotyrosyl Pentapeptide Length = 98

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 55

>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2 Domain Complexed With Phosphotyrosyl Heptapeptide Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2) Length = 98

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 6  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 56

>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes Reveal A Conformational Switch And Their Functional Implications. Length = 101

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 9  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 59

>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain (Human) Complexed With A Phosphotyrosyl Derivative Length = 96

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 4  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 54

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1   WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
           WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V
Sbjct: 60  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV 110

>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto- Oncogene Protein Vav1 Length = 138

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G + R  AES+LA + DG FLVR+      +F + + +  +V+H ++   E    I 
Sbjct: 28 WYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRIT 87
Query: 60 DEEFFENLAQLV 71
          +++ F  L +LV
Sbjct: 88 EKKAFRGLTELV 99

>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A Syk-Derived Doubly Phosphorylated Peptide Length = 107

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G + R  AES+LA + DG FLVR+      +F + + +  +V+H ++   E    I 
Sbjct: 11 WYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRIT 70
Query: 60 DEEFFENLAQLV 71
          +++ F  L +LV
Sbjct: 71 EKKAFRGLTELV 82

>pdb|2EO3|A Chain A, Solution Structure Of The Sh2 Domain From Human Crk-Like Protein Length = 111

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVK-YKEAHLTI 58
          W+ G +SR+ A++ L  +  G+FLVR+S+  P D+ + V   S+V HY +         I
Sbjct: 21 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 80
Query: 59 DDEEF 63
           D+EF
Sbjct: 81 GDQEF 85

>pdb|2LQN|A Chain A, Solution Structure Of Crkl Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVK-YKEAHLTI 58
          W+ G +SR+ A++ L  +  G+FLVR+S+  P D+ + V   S+V HY +         I
Sbjct: 14 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 73
Query: 59 DDEEF 63
           D+EF
Sbjct: 74 GDQEF 78

>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVK-YKEAHLTI 58
          W+ G +SR+ A++ L  +  G+FLVR+S+  P D+ + V   S+V HY +         I
Sbjct: 14 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 73
Query: 59 DDEEF 63
           D+EF
Sbjct: 74 GDQEF 78

>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2 Length = 525

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 1   WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDFMCVC-----------FESKVEHYR 48
           WFHG +S + AE LL  K + G FLVRES + P DF+               +SKV H  
Sbjct: 112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVM 171
Query: 49  VKYKEAHLTIDDEEFFENLAQLV 71
           ++ +E    +   E F++L  LV
Sbjct: 172 IRCQELKYDVGGGERFDSLTDLV 194

>pdb|2EYV|A Chain A, Sh2 Domain Of Ct10-Regulated Kinase Length = 124

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHY 47
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY
Sbjct: 12 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHY 59

>pdb|1R1P|A Chain A, Structural Basis For Differential Recognition Of Tyrosine Phosphorylated Sites In The Linker For Activation Of T Cells (lat) By The Adaptor Protein Gads Length = 100

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV 49
          WFH  +SR  AE+LL  K+ G F++R S + P DF + V  E  V+H++V
Sbjct: 11 WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKV 60

>pdb|1JU5|A Chain A, Ternary Complex Of An Crk Sh2 Domain, Crk-Derived Phophopeptide, And Abl Sh3 Domain By Nmr Spectroscopy Length = 109

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHY 47
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY
Sbjct: 2  WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHY 49

>pdb|2EYY|A Chain A, Ct10-Regulated Kinase Isoform I Length = 204

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHY 47
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY
Sbjct: 13 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHY 60

>pdb|1MIL|A Chain A, Transforming Protein Length = 104

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDD 60
          WFHGK+SR  AE+LL  + +G FLVREST  P  ++    +S    + +      +    
Sbjct: 9  WFHGKLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 66
Query: 61 EEFFENLAQLV 71
          +  FE+++ L+
Sbjct: 67 DHRFESVSHLI 77

>pdb|1D4T|A Chain A, Crystal Structure Of The Xlp Protein Sap In Complex With A Slam Peptide Length = 104

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 2  FHGKISRETAES-LLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE 53
          +HGKISRET E  LLA   DG +L+R+S + P  + +CV +   +  YRV   E
Sbjct: 7  YHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTE 60

>pdb|1NRV|A Chain A, Crystal Structure Of The Sh2 Domain Of Grb10 Length = 105

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRV----KYKE 53
          WFHG+ISRE +  ++  +   DGLFL+R+S + P+ F + +C   K++++++       +
Sbjct: 7  WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66
Query: 54 AHLTIDDEEF-FENLAQLV 71
             ++DD    F +L QLV
Sbjct: 67 TFFSLDDGNTKFSDLIQLV 85

>pdb|3M7F|A Chain A, Crystal Structure Of The Nedd4 C2GRB10 SH2 COMPLEX Length = 108

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRV----KYKE 53
          WFHG+ISRE +  ++  +   DGLFL+R+S + P+ F + +C   K++++++       +
Sbjct: 7  WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66
Query: 54 AHLTIDDEEF-FENLAQLV 71
             ++DD    F +L QLV
Sbjct: 67 TFFSLDDGNTKFSDLIQLV 85

>pdb|2AUG|A Chain A, Crystal Structure Of The Grb14 Sh2 Domain Length = 126

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLT 57
          WFH KISR+ A+ L+  +   DG+FLVR+S + P+ F + +    K++H+++   E    
Sbjct: 28 WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVE---- 83
Query: 58 IDDEEFFENL 67
           DD E F  L
Sbjct: 84 -DDGEMFHTL 92

>pdb|1KA6|A Chain A, SapSH2D1A BOUND TO PEPTIDE N-Py Length = 128

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 2  FHGKISRETAES-LLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE 53
          +HGKISRET E  LLA   DG +L+R+S + P  + +CV +   +  YRV   E
Sbjct: 7  YHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTE 60

>pdb|2EYZ|A Chain A, Ct10-Regulated Kinase Isoform Ii Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHY 47
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY
Sbjct: 13 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHY 60

>pdb|1TCE|A Chain A, Solution Nmr Structure Of The Shc Sh2 Domain Complexed With A Tyrosine-Phosphorylated Peptide From The T-Cell Receptor, Minimized Average Structure Length = 107

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDD 60
          WFHGK+SR  AE+LL  + +G FLVREST  P  ++    +S    + +      +    
Sbjct: 9  WFHGKLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGSQSGQPKHLLLVDPEGVVRTK 66
Query: 61 EEFFENLAQLV 71
          +  FE+++ L+
Sbjct: 67 DHRFESVSHLI 77

>pdb|2DVJ|A Chain A, Phosphorylated Crk-Ii Length = 230

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHY 47
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY
Sbjct: 15 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHY 62

>pdb|1X6C|A Chain A, Solution Structures Of The Sh2 Domain Of Human Protein- Tyrosine Phosphatase Shp-1 Length = 118

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDFMCVCFES----------KVEHYRV 49
          W+HG +S   AE+LL  K E   FLVRES + P DF+                +V H +V
Sbjct: 8  WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKV 67
Query: 50 KYKEAHLTIDDEEFFENLAQLV 71
            +    T+   E F++L  LV
Sbjct: 68 MCEGGRYTVGGLETFDSLTDLV 89

>pdb|2DX0|A Chain A, Crystal Structure Of The N-Terminal Sh2 Domain Of Mouse Phospholipase C-Gamma 2 Length = 138

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 1  WFHGKI-SRETAESLL------APKEDGLFLVRESTNFPQDFMCVCFES-KVEHYRVK 50
          WFH K+ SR +AE LL         +DG FLVRES  FP D+    + S +V+H R++
Sbjct: 24 WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIR 81

>pdb|2CI8|A Chain A, Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomplexed Length = 99

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W++GK++R  AE  L  +  +G FL+R+S + P DF + +  + K +H++V+ KE    I
Sbjct: 3  WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 62
Query: 59 DDEEF 63
             +F
Sbjct: 63 GQRKF 67

>pdb|2CI9|A Chain A, Nck1 Sh2-Domain In Complex With A Dodecaphosphopeptide From Epec Protein Tir Length = 102

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W++GK++R  AE  L  +  +G FL+R+S + P DF + +  + K +H++V+ KE    I
Sbjct: 7  WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 66
Query: 59 DDEEF 63
             +F
Sbjct: 67 GQRKF 71

>pdb|3CXL|A Chain A, Crystal Structure Of Human Chimerin 1 (Chn1) Length = 463

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 2   FHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDD 60
           FHG ISRE A+ LL   E G +L+RES   P  + + + F S+  ++R+ Y   H     
Sbjct: 54  FHGMISREAADQLLIVAE-GSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFV--G 110
Query: 61  EEFFENLAQLV 71
           E+ FE++  LV
Sbjct: 111 EKRFESIHDLV 121

>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1 Length = 532

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 1   WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDFMCVCFES----------KVEHYRV 49
           W+HG +S   AE+LL  K E   FLVRES + P DF+                +V H +V
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKV 169
Query: 50  KYKEAHLTIDDEEFFENLAQLV 71
             +    T+   E F++L  LV
Sbjct: 170 MCEGGRYTVGGLETFDSLTDLV 191

>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein Tyrosine Phosphatase Shp-1 Length = 595

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 1   WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDFMCVCFES----------KVEHYRV 49
           W+HG +S   AE+LL  K E   FLVRES + P DF+                +V H +V
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKV 169
Query: 50  KYKEAHLTIDDEEFFENLAQLV 71
             +    T+   E F++L  LV
Sbjct: 170 MCEGGRYTVGGLETFDSLTDLV 191

>pdb|2EOB|A Chain A, Solution Structure Of The Second Sh2 Domain From Rat Plc Gamma-2 Length = 124

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 1  WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDFMCVCFES--KVEHYRVKYKEAHL 56
          W++ ++SR  AE +L   P+ DG FL+R+      D   + F +  KV+H R+     H 
Sbjct: 21 WYYDRLSRGEAEDMLMRIPR-DGAFLIRKREG--TDSYAITFRARGKVKHCRINRDGRHF 77
Query: 57 TIDDEEFFENLAQLV 71
           +    +FE+L +LV
Sbjct: 78 VLGTSAYFESLVELV 92

>pdb|1RQQ|C Chain C, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 114

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 1  WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDFMCVC---FESKVEHYRVK 50
          WFHG +SR  A  L+    P+  GLF++R+S   P +  CV    F+ K +H R+ 
Sbjct: 13 WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGE--CVLTFNFQGKAKHLRLS 66

>pdb|1RPY|A Chain A, Crystal Structure Of The Dimeric Sh2 Domain Of Aps Length = 114

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 1  WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDFMCVC---FESKVEHYRVK 50
          WFHG +SR  A  L+    P+  GLF++R+S   P +  CV    F+ K +H R+ 
Sbjct: 13 WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGE--CVLTFNFQGKAKHLRLS 66

>pdb|2KK6|A Chain A, Solution Structure Of Sh2 Domain Of Proto-Oncogene Tyrosine- Protein Kinase Fer From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target Hr3461d Length = 116

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+HG I R  A+ LL  K+ G FLVRES   P ++ + V  + +  H+ ++Y +     +
Sbjct: 19 WYHGAIPRIEAQELL--KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFE 76
Query: 60 DEEFFENLAQLV 71
              F N+ QL+
Sbjct: 77 GTG-FSNIPQLI 87

>pdb|2DLZ|A Chain A, Solution Structure Of The Sh2 Domain Of Human Protein Vav-2 Length = 118

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WF G + R+  ++LL     G +L+RE     + F + + F  +V+H +V  K+  + I 
Sbjct: 18 WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHIT 77
Query: 60 DEEFFENLAQLV 71
          + + F++L +LV
Sbjct: 78 EAKKFDSLLELV 89

>pdb|2LNW|A Chain A, Identification And Structural Basis For A Novel Interaction Between Vav2 And Arap3 Length = 122

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WF G + R+  ++LL     G +L+RE     + F + + F  +V+H +V  K+  + I 
Sbjct: 24 WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHIT 83
Query: 60 DEEFFENLAQLV 71
          + + F++L +LV
Sbjct: 84 EAKKFDSLLELV 95

>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine Fyn-Related Kinase Length = 121

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1  WFHGKISRETAES--LLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHL 56
          WF G I R  AE   L +  + G FL+RES +   DF + V  E  V+HYR+ +  E   
Sbjct: 18 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGF 77
Query: 57 TIDDEEFFENLAQLV 71
           +   + F  L + V
Sbjct: 78 FLTRRKVFSTLNEFV 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	71
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	9e-30
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	1e-29
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	1e-29
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	2e-29
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	8e-28
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	1e-27
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	2e-27
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	1e-26
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	2e-26
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	2e-26
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	3e-26
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	3e-26
2dly_A	121	FYN-related kinase; BRK family kinase, structural	5e-26
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	1e-25
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	2e-25
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	3e-25
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	4e-25
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	5e-25
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	8e-25
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	1e-24
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	1e-24
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	2e-24
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	3e-24
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	7e-24
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	9e-24
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	1e-23
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-23
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	2e-23
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	2e-21
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	2e-23
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	3e-23
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	2e-22
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	5e-23
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	5e-23
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	7e-23
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	1e-22
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-22
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	7e-22
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	1e-16
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	8e-22
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	9e-22
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	1e-21
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	1e-21
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	3e-21
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	3e-21
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-21
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-17
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	1e-20
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-20
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	2e-20
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	4e-20
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	5e-20
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	6e-20
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	8e-20
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-19
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	2e-19
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	5e-19
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	5e-17
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	2e-18
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	3e-18
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	4e-18
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	7e-18
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	1e-17
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	3e-17
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-16
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	3e-16
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-16
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-14
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	2e-12
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	5e-12
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	1e-11
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	8e-07
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	1e-11
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	2e-11
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	1e-10
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	2e-09
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	6e-09
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	5e-08
1uur_A	473	Stata protein, STAT protein; transcription activat	2e-07
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	9e-04

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score =   99 bits (250), Expect = 9e-30
 Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKIS + A   L P EDGLFLVRES   P D+ +CV F   V HYRV +++ HLTID
Sbjct: 7  WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 66

Query: 60 DEEFFENLAQLV 71
          +  FF NL  +V
Sbjct: 67 EAVFFCNLMDMV 78

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score =  100 bits (251), Expect = 1e-29
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G + R  AES+LA + DG FLVR+      +F + + +  +V+H ++   E    I 
Sbjct: 28 WYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRIT 87

Query: 60 DEEFFENLAQLV 71
          +++ F  L +LV
Sbjct: 88 EKKAFRGLTELV 99

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 99.6 bits (249), Expect = 1e-29
 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  + KVEHYR+ Y  + L+ID
Sbjct: 10 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSID 69

Query: 60 DEEFFENLAQLV 71
          +E +FENL QLV
Sbjct: 70 EEVYFENLMQLV 81

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 99.6 bits (249), Expect = 2e-29
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WF G + R+  ++LL     G +L+RE     + F + + F  +V+H +V  K+  + I 
Sbjct: 18 WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHIT 77

Query: 60 DEEFFENLAQLV 71
          + + F++L +LV
Sbjct: 78 EAKKFDSLLELV 89

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 95.4 bits (238), Expect = 8e-28
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLTI 58
          W+HG +SR  AE LL+   +G FLVRES + P    + + +E +V HYR+    +  + +
Sbjct: 18 WYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYV 77

Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 78 TAESRFSTLAELV 90

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 94.6 bits (236), Expect = 1e-27
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLTI 58
          W+HG +SR  AE LL+   +G FLVRES + P    + + +E +V HYR+    +  L +
Sbjct: 7  WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 66

Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 67 SSESRFNTLAELV 79

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 94.3 bits (235), Expect = 2e-27
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WFH  I+   AE+LL  +  DG FL R S + P DF + V     V H +++    +  +
Sbjct: 9  WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDL 68

Query: 59 DDEEFFENLAQLV 71
             E F  LA+LV
Sbjct: 69 YGGEKFATLAELV 81

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 92.3 bits (230), Expect = 1e-26
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G +SR+ A++ L  +  G+FLVR+S+  P D+ + V   S+V HY +          
Sbjct: 21 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 80

Query: 60 DEEFFENLAQLV 71
           ++ F++L  L+
Sbjct: 81 GDQEFDHLPALL 92

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 91.5 bits (228), Expect = 2e-26
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFH  +SR  AE+LL  K+ G F++R S + P DF + V  E  V+H++V          
Sbjct: 11 WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFL 70

Query: 60 DEEFFENLAQLV 71
            E F +L +LV
Sbjct: 71 WTEKFPSLNKLV 82

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 91.6 bits (228), Expect = 2e-26
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHL 56
          WFHG +SR  A  L+        G+FLVR+S     +  +   F+ K +H R+    A  
Sbjct: 11 WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQ 70

Query: 57 TIDDEEFFENLAQLV 71
                 F+++  ++
Sbjct: 71 CRVQHLHFQSIFDML 85

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 91.6 bits (228), Expect = 3e-26
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WFHGKIS++ A +LL    +   FLVR S N P D+ +       ++ +++     +  +
Sbjct: 18 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM 77

Query: 59 DDEEFFENLAQLV 71
              ++ ++  ++
Sbjct: 78 MGGRYYNSIGDII 90

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 90.7 bits (226), Expect = 3e-26
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
          WF G ISR  A   L       G FL+R S     D+ + V     V HY++       L
Sbjct: 4  WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRL 63

Query: 57 TIDDEEFFENLAQLV 71
           +++   F +L +LV
Sbjct: 64 HLNEAVSFLSLPELV 78

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 91.2 bits (227), Expect = 5e-26
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
          WF G I R  AE  L  +  + G FL+RES +   DF + V  E  V+HYR++   E   
Sbjct: 18 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGF 77

Query: 57 TIDDEEFFENLAQLV 71
           +   + F  L + V
Sbjct: 78 FLTRRKVFSTLNEFV 92

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 89.5 bits (223), Expect = 1e-25
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V    A    
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 64

Query: 59 DDEEFFENLAQLV 71
               F +L +LV
Sbjct: 65 LWVVKFNSLNELV 77

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 89.3 bits (222), Expect = 2e-25
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V    A    
Sbjct: 8  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 67

Query: 59 DDEEFFENLAQLV 71
               F +L +LV
Sbjct: 68 LWVVKFNSLNELV 80

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 88.9 bits (221), Expect = 3e-25
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES-TNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W+ G ISRE     L    DG FLVR++ T    D+ + +      +  ++ +++     
Sbjct: 13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGF 72

Query: 59 DDEEFFENLAQLV 71
           D   F ++ +L+
Sbjct: 73 SDPLTFSSVVELI 85

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 88.5 bits (220), Expect = 4e-25
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA--- 54
          WFHG+ISRE ++ L+      DGLFLVRES   PQ F + +C   KV+HY +   E    
Sbjct: 16 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 75

Query: 55 -HLTIDD-EEFFENLAQLV 71
           + ++DD +  F +L QLV
Sbjct: 76 LYFSMDDGQTRFTDLLQLV 94

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 88.6 bits (220), Expect = 5e-25
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 8/79 (10%)

Query: 1   WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA--- 54
           WFH KISR+ A+ L+      DG+FLVR+S + P+ F + +    K++H+++   E    
Sbjct: 28  WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGE 87

Query: 55  --HLTIDDEEFFENLAQLV 71
             H   D    F +L QLV
Sbjct: 88  MFHTLDDGHTRFTDLIQLV 106

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 88.1 bits (219), Expect = 8e-25
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W++ ++SR  AE +L     DG FL+R+       + +      KV+H R+     H  +
Sbjct: 21 WYYDRLSRGEAEDMLMRIPRDGAFLIRKREG-TDSYAITFRARGKVKHCRINRDGRHFVL 79

Query: 59 DDEEFFENLAQLV 71
              +FE+L +LV
Sbjct: 80 GTSAYFESLVELV 92

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 86.9 bits (216), Expect = 1e-24
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGK+SR  AE+LL  + +G FLVREST  P  + +      + +H  +   E  +   
Sbjct: 9  WFHGKLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 66

Query: 60 DEEFFENLAQLV 71
          D   FE+++ L+
Sbjct: 67 DHR-FESVSHLI 77

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 87.3 bits (217), Expect = 1e-24
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLT 57
          W HG I+R  AE LL+   +DG FLVR S +  + + +CV + + V  YR+   ++   T
Sbjct: 12 WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFT 71

Query: 58 IDDEE-----FFENLAQLV 71
          +   E     FF  L QL+
Sbjct: 72 VQASEGVSMRFFTKLDQLI 90

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 86.6 bits (215), Expect = 2e-24
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKE--AHLTI 58
          WFHG ISRE AE+LL  +  G FL+R S +     +    +S   H+ VK  +    +  
Sbjct: 18 WFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIP 77

Query: 59 DDEEFFENLAQLV 71
           ++    +L  LV
Sbjct: 78 GEKVAHTSLDALV 90

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 86.2 bits (214), Expect = 3e-24
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
          ++HG +++   E+LL     DG FL+R+S + P    +CV F+  V  YR+       Y+
Sbjct: 5  YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYR 64

Query: 53 EAHLTIDDEEFFENLAQLV 71
                     F NL +LV
Sbjct: 65 IETDAHTPRTIFPNLQELV 83

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 85.0 bits (211), Expect = 7e-24
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-- 55
          WFHG+ISRE +  ++      DGLFL+R+S + P+ F + +C   K++++++   E    
Sbjct: 7  WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66

Query: 56 --LTIDD-EEFFENLAQLV 71
             ++DD    F +L QLV
Sbjct: 67 TFFSLDDGNTKFSDLIQLV 85

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 85.0 bits (211), Expect = 9e-24
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-LTI 58
          W  G  +R  AE+LL  K DG FLVRES+     +   V  + +V+H  +          
Sbjct: 12 WNVGSSNRNKAENLLRGKRDGTFLVRESSK-QGCYACSVVVDGEVKHCVINKTATGYGFA 70

Query: 59 DDEEFFENLAQLV 71
          +    + +L +LV
Sbjct: 71 EPYNLYSSLKELV 83

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 84.6 bits (210), Expect = 1e-23
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W++G ++R  AE  L     +G FL+R+S + P DF + +    K +H++V+  +    I
Sbjct: 7  WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 66

Query: 59 DDEEFFENLAQLV 71
               F  + +LV
Sbjct: 67 GQRR-FHTMDELV 78

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 90.9 bits (226), Expect = 1e-23
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct: 82  WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 141

Query: 60  DEEFFENLAQLV 71
           +E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 88.0 bits (218), Expect = 2e-23
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
          +F G I+RE AE  L      DGL+L+R+S N+   F + V    K  HY ++       
Sbjct: 7  FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 66

Query: 57 TIDDEEFFENLAQLV 71
           I       + A L 
Sbjct: 67 AIAGGRTHASPADLC 81

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 82.7 bits (204), Expect = 2e-21
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 1   WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
           WFHGKISRE +E ++    K +G FL+R   N    + +C+  E KV HYR+   K   L
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKL 218

Query: 57  TIDDEEFFENLAQLV 71
           +I + + F+ L QLV
Sbjct: 219 SIPEGKKFDTLWQLV 233

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 84.3 bits (209), Expect = 2e-23
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+HG I R  A+ LL  K+ G FLVRES   P ++ + V  + +  H+ ++Y +     +
Sbjct: 19 WYHGAIPRIEAQELL--KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFE 76

Query: 60 DEEFFENLAQLV 71
              F N+ QL+
Sbjct: 77 GTG-FSNIPQLI 87

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 87.3 bits (216), Expect = 3e-23
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
          +F+G ISR  AE  L  A   DGLFL+R+       + + +  + +  H+ ++       
Sbjct: 8  FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 67

Query: 57 TIDDEEFFENLAQLV 71
           I   +     A+L 
Sbjct: 68 AIAGGKAHCGPAELC 82

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 85.0 bits (210), Expect = 2e-22
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 1   WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
           W+H  ++RE AE  L    + DG FL+R        + + + +   V HY +   K    
Sbjct: 161 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKY 219

Query: 57  TIDDEEFFENLAQLV 71
            I +   F+ L QLV
Sbjct: 220 CIPEGTKFDTLWQLV 234

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 83.4 bits (206), Expect = 5e-23
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 18/89 (20%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY +        + 
Sbjct: 2  WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 61

Query: 60 -----------------DEEFFENLAQLV 71
                            ++ F++L  L+
Sbjct: 62 PSPAQPPPGVSPSRLRIGDQEFDSLPALL 90

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 84.1 bits (208), Expect = 5e-23
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           W+ G I+R  AE  LA   DG FLVR+S++      +      K  H R+++     +  
Sbjct: 26  WYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFY 85

Query: 60  ---DEEFFENLAQLV 71
              D E   ++  L+
Sbjct: 86  EQPDVEGHTSIVDLI 100

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 82.8 bits (205), Expect = 7e-23
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
           +HGKISRET E LL A   DG +L+R+S + P  + +CV +   +  YRV       + 
Sbjct: 6  VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWS 65

Query: 53 EAHLTIDDEEFFENLAQLV 71
                  + +F  +  L+
Sbjct: 66 AETAPGVHKRYFRKIKNLI 84

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 82.5 bits (204), Expect = 1e-22
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
           +HGKISRET E LL A   DG +L+R+S + P  + +CV +   +  YRV       + 
Sbjct: 6  VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWS 65

Query: 53 EAHLTIDDEEFFENLAQLV 71
                  + +F  +  L+
Sbjct: 66 AETAPGVHKRYFRKIKNLI 84

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 86.4 bits (214), Expect = 4e-22
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLTI 58
           W+HG +SR  AE LL+   +G FLVRES + P    + + +E +V HYR+    +  L +
Sbjct: 107 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 166

Query: 59  DDEEFFENLAQLV 71
             E  F  LA+LV
Sbjct: 167 SSESRFNTLAELV 179

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 85.3 bits (210), Expect = 7e-22
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES-TNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          W+ G ISRE     L    DG FLVR++ T    D+ + +      +  ++ +++     
Sbjct: 12 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGF 71

Query: 59 DDEEFFENLAQLV 71
           D   F ++ +L+
Sbjct: 72 SDPLTFSSVVELI 84

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 71.0 bits (173), Expect = 1e-16
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEA-HLTID 59
           W  G  +R  AE+LL  K DG FLVRES+        V  + +V+H  +      +   +
Sbjct: 303 WNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAE 362

Query: 60  DEEFFENLAQL 70
               + +L +L
Sbjct: 363 PYNLYSSLKEL 373

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 81.0 bits (200), Expect = 8e-22
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 12/83 (14%)

Query: 1   WFHGKI-SRETAESLL------APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK 52
           WFH K+ SR +AE LL         +DG FLVRES  FP D+ +      +V+H R++  
Sbjct: 24  WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRST 83

Query: 53  E----AHLTIDDEEFFENLAQLV 71
                    + D   F ++  L+
Sbjct: 84  MENGVMKYYLTDNLTFNSIYALI 106

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 79.6 bits (197), Expect = 9e-22
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFES-----KVEHYRVKY- 51
          W+ GK+ R+ AE  L       G FL+RES      + + +          V+HY+++  
Sbjct: 7  WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 66

Query: 52 KEAHLTIDDEEFFENLAQLV 71
                I     FE L QLV
Sbjct: 67 DNGGYYITTRAQFETLQQLV 86

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 79.6 bits (197), Expect = 1e-21
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESK-----VEHYRVKY- 51
          WF   +SR+ AE  L       G FL+RES +    F + V    +     V+HY+++  
Sbjct: 6  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65

Query: 52 KEAHLTIDDEEFFENLAQLV 71
                I     F  L +LV
Sbjct: 66 DNGGFYISPRITFPGLHELV 85

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 79.6 bits (197), Expect = 1e-21
 Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKY- 51
          W+H  I+R  AE LL  + ++G F+VR+S +    + + V        E+ ++HY++K  
Sbjct: 18 WYHRNITRNQAEHLLRQESKEGAFIVRDSRH-LGSYTISVFMGARRSTEAAIKHYQIKKN 76

Query: 52 KEAHLTIDDEEFFENLAQLV 71
                + +   F+++ +L+
Sbjct: 77 DSGQWYVAERHAFQSIPELI 96

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 78.5 bits (194), Expect = 3e-21
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCV----CFESKVEHYRV-KYK 52
          WF   ISR+ AE  L     + G FL+RES +    F + V         V+HY++    
Sbjct: 14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73

Query: 53 EAHLTIDDEEFFENLAQLV 71
               I     F  L  LV
Sbjct: 74 NGGYYISPRITFPTLQALV 92

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 80.7 bits (199), Expect = 3e-21
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
            + G + +  AE+LL  K +G FL+R+S      F +     S+  H R++    + + D
Sbjct: 36  CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFD 95

Query: 60  DEEF----FENLAQLV 71
             +       ++  L+
Sbjct: 96  AHDPCVFHSPDITGLL 111

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 83.1 bits (205), Expect = 8e-21
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHL 56
          +F+G ISR  AE  L  A   DGLFL+R+       + + +  + +  H+ ++ +     
Sbjct: 10 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 69

Query: 57 TIDDEEFFENLAQLV 71
           I   +     A+L 
Sbjct: 70 AIAGGKAHCGPAELC 84

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 73.8 bits (181), Expect = 1e-17
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 1   WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHL 56
           W+H  ++RE AE  L    + DG FL+R        + + + +   V HY + + K    
Sbjct: 163 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKY 221

Query: 57  TIDDEEFFENLAQLV 71
            I +   F+ L QLV
Sbjct: 222 CIPEGTKFDTLWQLV 236

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 78.3 bits (193), Expect = 1e-20
 Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G ++   A+  L    +G FL+R+S++      + V   +   + R++Y++    +D
Sbjct: 19 WYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLD 78

Query: 60 DEEF-------FENLAQLV 71
                     F+++  L+
Sbjct: 79 SIICVKSKLKQFDSVVHLI 97

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 81.5 bits (202), Expect = 2e-20
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDD 60
          W+HG I R     LL     G FLVRES    +  + V ++    H+ ++  + +L   +
Sbjct: 15 WYHGAIPRAEVAELL--VHSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLD-NLYRLE 71

Query: 61 EEFFENLAQLV 71
           E F ++  L+
Sbjct: 72 GEGFPSIPLLI 82

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 76.5 bits (189), Expect = 2e-20
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKY- 51
          WF G ISR  +E LL  K ++G F+VR S+     + + +        +  V+HY V   
Sbjct: 13 WFAGNISRSQSEQLLRQKGKEGAFMVRNSSQ-VGMYTVSLFSKAVNDKKGTVKHYHVHTN 71

Query: 52 KEAHLTIDDEEFFENLAQLV 71
           E  L + +   F+++ +L+
Sbjct: 72 AENKLYLAENYCFDSIPKLI 91

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 79.7 bits (195), Expect = 4e-20
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G +SR+ A++ L  +  G+FLVR+S+  P D+ + V   S+V HY +          
Sbjct: 14 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 73

Query: 60 DEEFFENLAQLV 71
           ++ F++L  L+
Sbjct: 74 GDQEFDHLPALL 85

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 75.8 bits (187), Expect = 5e-20
 Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFES------KVEHYRVKY- 51
          W+   ++R  AE LL  + ++G F+VR+S+     + + V  +S       + HY V   
Sbjct: 13 WYSKHMTRSQAEQLLKQEGKEGGFIVRDSSK-AGKYTVSVFAKSTGDPQGVIRHYVVCST 71

Query: 52 KEAHLTIDDEEFFENLAQLV 71
           ++   + ++  F  + +L+
Sbjct: 72 PQSQYYLAEKHLFSTIPELI 91

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 76.9 bits (189), Expect = 6e-20
 Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           ++   ++   A  LL+ +  G FL+R+S++    F + V  +S  ++ R++ +    ++ 
Sbjct: 25  FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQ 84

Query: 60  DEEF-------FENLAQLV 71
            +         F+ + +LV
Sbjct: 85  SDPRSTQPVPRFDCVLKLV 103

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 78.9 bits (194), Expect = 8e-20
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-LTI 58
           W+ GKI+R  AE +L+ K DG FL+RES+     +   V  +   +H  +          
Sbjct: 196 WYVGKINRTQAEEMLSGKRDGTFLIRESSQ-RGCYACSVVVDGDTKHCVIYRTATGFGFA 254

Query: 59  DDEEFFENLAQLV 71
           +    + +L +LV
Sbjct: 255 EPYNLYGSLKELV 267

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 74.3 bits (183), Expect = 2e-19
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDD 60
          W+HG I R     LL     G FLVRES    +  + V ++    H+ ++  +    ++ 
Sbjct: 18 WYHGAIPRAEVAELL--VHSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEG 75

Query: 61 EEFFENLAQLV 71
          E  F ++  L+
Sbjct: 76 EG-FPSIPLLI 85

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 76.9 bits (188), Expect = 2e-19
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY +        + 
Sbjct: 15 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 74

Query: 60 DEEFFEN 66
                 
Sbjct: 75 PSPAQPP 81

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 75.7 bits (186), Expect = 5e-19
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 1   WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
           W+H  ++R  AE +L     DG FLVR+    P  + +    E K++H RV+ +E    +
Sbjct: 124 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNE-PNSYAISFRAEGKIKHCRVQ-QEGQTVM 181

Query: 59  DDEEFFENLAQLV 71
                F++L  L+
Sbjct: 182 LGNSEFDSLVDLI 194

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 70.3 bits (172), Expect = 5e-17
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)

Query: 1  WFHGKIS-----RETAESLLAP------KEDGLFLVRESTNFPQDF-MCVCFESKVEHYR 48
          WFHGK+      R  AE LL          DG FLVRES  F  D+ +      KV+H R
Sbjct: 6  WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCR 65

Query: 49 VKYKEA----HLTIDDEEFFENLAQLV 71
          +  ++        + D   F++L  L+
Sbjct: 66 IHSRQDAGTPKFFLTDNLVFDSLYDLI 92

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 71.6 bits (176), Expect = 2e-18
 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 12/82 (14%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESK------VEHYRVKY- 51
          W++  ISR+ AE LL    ++G F+VR+S   P  + + V  ++       ++HY +K  
Sbjct: 11 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKET 69

Query: 52 --KEAHLTIDDEEFFENLAQLV 71
                  + ++  F+++  L+
Sbjct: 70 NDSPKRYYVAEKYVFDSIPLLI 91

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 71.4 bits (175), Expect = 3e-18
 Identities = 15/78 (19%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFE---SKVEHYRVKYKEAH 55
               +SR+ A  +L      G  ++R  ++  +++ + +  E    +++HY+V     +
Sbjct: 17 ACFYTVSRKEATEMLQKNPSLGNMILRPGSD-SRNYSITIRQEIDIPRIKHYKVMSVGQN 75

Query: 56 LTIDDEE--FFENLAQLV 71
           TI+ E+     NL  ++
Sbjct: 76 YTIELEKPVTLPNLFSVI 93

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 71.9 bits (176), Expect = 4e-18
 Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           ++   ++   A  LL+ +  G FL+R+S++    F + V  +S  ++ R++ +    ++ 
Sbjct: 36  FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQ 95

Query: 60  DEEF-------FENLAQLV 71
            +         F+ + +LV
Sbjct: 96  SDPRSTQPVPRFDXVLKLV 114

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126

 Score = 70.6 bits (172), Expect = 7e-18
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLL------APKEDGLFLVRESTNFPQDFMCV--CFESKVEHYRVKYK 52
           F         E L          +DGL+ +R S+      + V     +KV +YR+  K
Sbjct: 19 VFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEK 78

Query: 53 EAHLTIDDEEFFENLAQLV 71
          ++   ++ E  F ++  +V
Sbjct: 79 DSKFYLEGEVLFVSVGSMV 97

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 70.3 bits (172), Expect = 1e-17
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 1   WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF---MCVCFESKVEHYRVKYKEAH- 55
           W+ G   R++AE  L    +DG FL+R+S+         +   F  +V +  V++ EA  
Sbjct: 25  WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATK 84

Query: 56  -----LTIDDEEFFENLAQLV 71
                   + EE+F ++ ++V
Sbjct: 85  QYALGKKKNGEEYFGSVVEIV 105

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 69.2 bits (169), Expect = 3e-17
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 19/90 (21%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCV----------------CFESKV 44
           W+   +SR+ A +LL  K+ G FL+R+S +F   +                     E  V
Sbjct: 22  WYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLV 81

Query: 45  EHYRVKYKEAHLTI---DDEEFFENLAQLV 71
            H+ ++     + I     E +F +L+ LV
Sbjct: 82  RHFLIETGPKGVKIKGCPSEPYFGSLSALV 111

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 69.9 bits (171), Expect = 3e-16
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 1   WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFE-----SKVEHYRV-KY 51
           W+ GKI+R  +E LL       G FLVRES      + + V          V+HY++ K 
Sbjct: 150 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 209

Query: 52  KEAHLTIDDEEFFENLAQLV 71
                 I     F +L QLV
Sbjct: 210 DSGGFYITSRTQFNSLQQLV 229

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 69.6 bits (169), Expect = 3e-16
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY +        + 
Sbjct: 13 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 72

Query: 60 DEEFFEN 66
                 
Sbjct: 73 PSPAQPP 79

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 69.7 bits (171), Expect = 3e-16
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 1   WFHGKISRETAESLLAPKED--GLFLVRESTNFPQDF-MCVCFES-----KVEHYRVKY- 51
           WF   ISR+ AE  L    +  G F++R+S      + + V          V+HY+++  
Sbjct: 72  WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 131

Query: 52  KEAHLTIDDEEFFENLAQLV 71
                 I     F  L +LV
Sbjct: 132 DNGGFYISPRSTFSTLQELV 151

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 64.4 bits (157), Expect = 3e-14
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 1   WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFE-----SKVEHYRVK-Y 51
           W+ GKI+R  +E LL   E   G FLVRES      + + V          V+HY+++  
Sbjct: 67  WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 126

Query: 52  KEAHLTIDDEEFFENLAQLV 71
                 I     F +L QLV
Sbjct: 127 DSGGFYITSRTQFNSLQQLV 146

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 57.8 bits (139), Expect = 2e-12
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 1   WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESK-----VEHYRVKY- 51
           WF   +SR+ AE  L       G FL+RES +    F + V    +     V+HY+++  
Sbjct: 76  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135

Query: 52  KEAHLTIDDEEFFENLAQLV 71
                 I     F  L +LV
Sbjct: 136 DNGGFYISPRITFPGLHELV 155

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 57.0 bits (137), Expect = 5e-12
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 1   WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
           WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V    A    
Sbjct: 60  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 119

Query: 59  DDEEFFENLAQLV 71
                F +L +LV
Sbjct: 120 LWVVKFNSLNELV 132

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 56.8 bits (137), Expect = 1e-11
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WFH  I+   AE+LL  +  DG FL R S + P D  + V     V H +++    +  +
Sbjct: 6  WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDL 65

Query: 59 DDEEFFENLAQLV 71
             E F  LA+LV
Sbjct: 66 YGGEKFATLAELV 78

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 43.3 bits (102), Expect = 8e-07
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 1   WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF 35
           WFHG +S + AE LL  K + G FLVRES + P DF
Sbjct: 112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDF 147

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532

 Score = 56.4 bits (136), Expect = 1e-11
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WFH  +S   AE+LL  +   G FL R S     DF + V    +V H R++       +
Sbjct: 4  WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 63

Query: 59 DDEEFFENLAQLV 71
             E F  L +LV
Sbjct: 64 YGGEKFATLTELV 76

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} Length = 595

 Score = 56.5 bits (136), Expect = 2e-11
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WFH  +S   AE+LL  +   G FL R S     DF + V    +V H R++       +
Sbjct: 4  WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 63

Query: 59 DDEEFFENLAQLV 71
             E F  L +LV
Sbjct: 64 YGGEKFATLTELV 76

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens} Length = 118

 Score = 51.7 bits (123), Expect = 1e-10
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 1   WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESK----VEHYRVKYKEA 54
               K+SR  A+ LL    E G  L+R S +      +           V HY+VK +  
Sbjct: 23  SCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGP 82

Query: 55  HLTIDDEE--FFENLAQLV 71
              ID E+     +L  +V
Sbjct: 83  KYVIDVEQPFSCTSLDAVV 101

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A Length = 463

 Score = 50.3 bits (120), Expect = 2e-09
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)

Query: 2   FHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDD 60
           FHG ISRE A+ LL    +G +L+RES   P  + + + F S+  ++R+ Y   H     
Sbjct: 54  FHGMISREAADQLLI-VAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFV--G 110

Query: 61  EEFFENLAQLV 71
           E+ FE++  LV
Sbjct: 111 EKRFESIHDLV 121

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 48.2 bits (114), Expect = 6e-09
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 1  WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDFMCVCFE----SKVEHYRVKYKE 53
          ++   +SRE A  LL   +   G FL+R+S+  P ++     E    + V HY ++  E
Sbjct: 14 FYFPGMSREEAHKLLGEPQVSIGTFLMRDSSR-PGEYSLTVREADEGNAVCHYLIERGE 71

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 46.7 bits (110), Expect = 5e-08
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESK---VEHYRV 49
          ++   +SRE A  LL       G FL+R+S+  P ++ + V    +   V HY +
Sbjct: 43 FYFPGMSREEAHKLLGEPQVSIGTFLMRDSSR-PGEYSLTVREADEGNAVCHYLI 96

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A* Length = 473

 Score = 45.0 bits (105), Expect = 2e-07
 Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFES----KVEHYRVKYKEAHL 56
             +G + R+     L  ++ G F++R S   P  F           +++HY V+  +   
Sbjct: 353 IIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAA 412

Query: 57  TIDD-EEFFENLAQLV 71
                 +F    +Q V
Sbjct: 413 AKKTFPDFLSEHSQFV 428

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 34.0 bits (78), Expect = 9e-04
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 1   WFHGKISRETAESLL 15
           W+ GK+ R+ AES  
Sbjct: 92  WYFGKMGRKDAESGP 106

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	71
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.96
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.96
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.96
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.96
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.95
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.95
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.95
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.95
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.95
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.95
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.95
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.95
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.95
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.95
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.95
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.95
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.95
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.95
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.95
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.95
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.95
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.95
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.95
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.94
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.94
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.94
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.94
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.94
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.94
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.94
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.94
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.94
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.94
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.94
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.94
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.94
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.94
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.94
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.94
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.94
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.94
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.94
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.93
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.93
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.93
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.93
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.93
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.92
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.92
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.92
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.92
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.91
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.91
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.91
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.91
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.91
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.91
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.9
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.89
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.89
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.89
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.88
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.88
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.81
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.88
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.88
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.88
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.88
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.87
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.87
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.85
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.85
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.84
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.84
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.83
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.82
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.8
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.8
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.79
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.79
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	99.58
1uur_A	473	Stata protein, STAT protein; transcription activat	99.24
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	99.09
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	98.68
1yvl_A	683	Signal transducer and activator of transcription 1	98.68
1y1u_A	585	Signal transducer and activator of transcription;	98.62
1bf5_A	575	Signal transducer and activator of transcription 1	98.48
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	98.44
3op0_A	323	Signal transduction protein CBL-C; structural geno	98.33
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	98.31
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	98.03
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	97.79
2di8_A	111	Filamin-B; beta-sandwich, immunoglobulin-like fold	94.11
3rgh_A	100	Filamin-A; cell adhesion, cytoskeleton-complex, di	93.71
2w0p_A	94	Filamin-A; alternative splicing, cytoskeleton/comp	93.71
2bp3_A	97	Filamin A; structural protein, cytoskeleton/comple	93.65
2eea_A	115	Filamin-B; beta-sandwich, immunoglobulin-like fold	93.44
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	93.38
2dia_A	113	Filamin-B; beta-sandwich, immunoglobulin-like fold	93.36
2k9u_A	119	Gamma filamin; cytoskeletal complex, alternative s	93.22
1v05_A	96	Filamin C; actin-binding protein, immunoglobulin;	93.17
2dic_A	105	Filamin-B; beta-sandwich, immunoglobulin-like fold	93.03
2ds4_A	113	Tripartite motif protein 45; beta-sandwich, immuno	92.79
2ee6_A	105	Filamin-B; beta-sandwich, immunoglobulin-like fold	92.66
2d7o_A	111	Filamin-C; beta-sandwich, immunoglobulin-like fold	92.29
2dmb_A	124	Filamin-B; beta-sandwich, immunoglobulin-like fold	92.17
2dj4_A	108	Filamin-B; beta-sandwich, immunoglobulin-like fold	92.03
2di7_A	124	BK158_1; beta-sandwich, immunoglobulin-like fold,	91.57
3cnk_A	89	Filamin-A; FLNA24, X-RAY crystalography, homodimer	91.57
2di9_A	131	Filamin-B; beta-sandwich, immunoglobulin-like fold	91.51
2e9j_A	119	Filamin-B; beta-sandwich, immunoglobulin-like fold	91.42
2d7m_A	115	Filamin-C; beta-sandwich, immunoglobulin-like fold	91.22
2d7n_A	93	Filamin-C; beta-sandwich, immunoglobulin-like fold	90.65
2dib_A	128	Filamin-B; beta-sandwich, immunoglobulin-like fold	90.03
2d7p_A	112	Filamin-C; beta-sandwich, immunoglobulin-like fold	89.72
2ee9_A	95	Filamin-B; beta-sandwich, immunoglobulin-like fold	89.69
2dlg_A	102	Filamin-B; beta-sandwich, immunoglobulin-like fold	89.1
2k7p_A	188	Filamin-A; IG-like, ABP-280, actin binding protein	87.08
2eec_A	125	Filamin-B; beta-sandwich, immunoglobulin-like fold	85.59
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	85.28
2k7q_A	191	Filamin-A; IG-like, ABP-280, actin binding protein	85.07
2j3s_A	288	Filamin-A; cytoskeleton, phosphorylation, structur	84.11
1qfh_A	212	Protein (gelation factor); actin binding protein,	82.25
2dmc_A	116	Filamin-B; beta-sandwich, immunoglobulin-like fold	81.67
2y1n_A	389	E3 ubiquitin-protein ligase; ligase-transferase co	80.52

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.96  E-value=1.4e-29  Score=129.69  Aligned_cols=71  Identities=56%  Similarity=0.987  Sum_probs=67.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||+|++.++.| ||++.++.++||+|.+.++.|++.+...|+||.|||
T Consensus         7 Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv   78 (98)
T 3us4_A            7 WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMV   78 (98)
T ss_dssp             TBCCSCCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEETTEEESSSSSEESSHHHHH
T ss_pred             ccCCCCCHHHHHHHccCCCCcEEEEEeCCCCCCcEEEEEEECCceEEEEEEEeCCEEEECCCCccCCHHHHH
Confidence            99999999999999998899999999999999999 999999999999999988999998788999999986

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.96  E-value=3.5e-29  Score=129.81  Aligned_cols=71  Identities=65%  Similarity=1.155  Sum_probs=67.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.++.| ||++.++.++||+|.+.++.|++.+...|+||.+||
T Consensus        10 Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~Lv   81 (106)
T 3eaz_A           10 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLV   81 (106)
T ss_dssp             TBCCSCCHHHHHHHTCSCCTTEEEEEECTTSTTCEEEEEEETTEEEEEECEEETTEEESSSSSCBSSHHHHH
T ss_pred             CcCCCCCHHHHHHHhCCCCCCEEEEEECCCCCCcEEEEEEeCCceEEEEEEecCCEEEECCCCccCCHHHHH
Confidence            99999999999999998899999999999999999 999999999999999888999998778999999986

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.96  E-value=1.4e-28  Score=130.00  Aligned_cols=71  Identities=24%  Similarity=0.479  Sum_probs=67.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCC-CCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNF-PQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~-~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|++. ++.| ||++.++.++||+|.+.++.|.+.+...|+||.+||
T Consensus        13 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LI   85 (120)
T 2iug_A           13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELI   85 (120)
T ss_dssp             TBCCSCCHHHHHHHHTTCCTTEEEEEECSSGGGCSEEEEEEETTEEEEEEEEEETTEEESSSSCCBSSHHHHH
T ss_pred             ccccCCCHHHHHHHhcCCCCcEEEEECCCCCCCCcEEEEEEECCEEEEEEEEEcCCEEEECCCCccCCHHHHH
Confidence            9999999999999999889999999999988 8999 999999999999999988999998778999999986

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.96  E-value=8.2e-29  Score=130.59  Aligned_cols=71  Identities=30%  Similarity=0.652  Sum_probs=67.5

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|++.++.| ||++.++.++||+|.+.++.|++.+...|+||.|||
T Consensus        18 WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LV   89 (118)
T 2dlz_A           18 WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELV   89 (118)
T ss_dssp             TEEESCCHHHHHHHHHHSCTTBEEEECCSCSSCCEEEEEECSSSEEEEEEEEETTEEESTTSCCBSSHHHHH
T ss_pred             ceecCCCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCcEEEEEEEEcCCEEEEeCCcccCCHHHHH
Confidence            99999999999999987899999999999889999 999999999999999988999998778999999986

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.95  E-value=3e-28  Score=127.31  Aligned_cols=71  Identities=41%  Similarity=0.731  Sum_probs=66.3

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.++.| ||++.++.++||+|.+. +|.|++.+...|+||.|||
T Consensus         7 Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV   79 (112)
T 3k2m_A            7 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELV   79 (112)
T ss_dssp             TEEESCCHHHHHHHTTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEESSTTCCBSSHHHHH
T ss_pred             ceeeCCCHHHHHHHhccCCCceEEEEeCCCCCCCEEEEEEeCCcEEEEEEEECCCCcEEECCCCeECCHHHHH
Confidence            99999999999999998899999999999999999 99999999999999986 5678887778999999986

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.95  E-value=1.2e-28  Score=130.57  Aligned_cols=71  Identities=30%  Similarity=0.652  Sum_probs=67.6

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..+++|+||||.|++.++.| ||++.++.++||+|.+.+++|++.+...|+||.+||
T Consensus        24 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLV   95 (122)
T 2lnw_A           24 WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELV   95 (122)
T ss_dssp             TBCCSCCHHHHHHHHHHSCTTBEEEEECCCSSEEEEEEEECSSCEEEEEEEEETTEEESSSSCCBSSHHHHH
T ss_pred             CCCcCCCHHHHHHHhcCCCCCeEEEEeCCCCCCcEEEEEEeCCcEEEEEEEEcCCEEEECCCCeECCHHHHH
Confidence            99999999999999987789999999999889999 999999999999999988999998889999999986

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.95  E-value=9.6e-29  Score=127.07  Aligned_cols=71  Identities=32%  Similarity=0.545  Sum_probs=66.0

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++  .++|+||||.|++.++.| ||++.++.++||+|.++ +|.|++.+...|+||.|||
T Consensus         4 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   78 (100)
T 1rja_A            4 WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELV   78 (100)
T ss_dssp             CBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHH
T ss_pred             cccCCCCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCcEEECCCCccCCHHHHH
Confidence            99999999999999986  689999999999989999 99999999999999985 6789998778999999986

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.95  E-value=1e-27  Score=129.60  Aligned_cols=71  Identities=30%  Similarity=0.435  Sum_probs=67.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEEC---CCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID---DEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~---~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|++.++.| ||++.++.++||+|.+.++.|.+.   ....|+||.|||
T Consensus        26 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~~~~F~sl~eLI  100 (141)
T 2vif_A           26 WYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLI  100 (141)
T ss_dssp             CBCCSCCHHHHHHHTTTSCTTCEEEEECSSTTCSEEEEEEETTEEEEEEEEEETTEEEETTCCSCCCBSSHHHHH
T ss_pred             CcccCCCHHHHHHHhcCCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEEECCEEEEeecCCCCccCCHHHHH
Confidence            99999999999999988899999999999989999 999999999999999998999998   578999999986

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.95  E-value=2.7e-28  Score=124.66  Aligned_cols=70  Identities=40%  Similarity=0.700  Sum_probs=64.4

Q ss_pred             CcccCCCHHHHHHhhCCCC-CceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKE-DGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~-~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..+ +|+||||.|++.++.| ||++.++.++||+|.++ ++.|++.+ ..|+||.|||
T Consensus         5 Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LV   77 (96)
T 1jyr_A            5 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV-VKFNSLNELV   77 (96)
T ss_dssp             TBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS-CEESSHHHHH
T ss_pred             eeccCCCHHHHHHHHhcCCCCcEEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECC-cccCCHHHHH
Confidence            9999999999999998765 9999999999999999 99999999999999986 56888874 8899999986

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.95  E-value=1.5e-27  Score=124.70  Aligned_cols=70  Identities=31%  Similarity=0.514  Sum_probs=64.6

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECC-CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDD-EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~-~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.| +.++.| ||++.++.|+||+|.+.+++|++.+ ...|+||.|||
T Consensus        12 Wyhg~isR~~Ae~lL~~~~~G~FLVR~S-~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV   83 (112)
T 1h9o_A           12 WNVGSSNRNKAENLLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELV   83 (112)
T ss_dssp             TBCCSCCHHHHHHHHTTCCTTEEEEEEC-SSTTCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHhcCCCCceEEEeec-CCCCCEEEEEEECCEEEEEEEEEcCCceEEeCCCCCcCCHHHHH
Confidence            9999999999999998889999999999 889999 9999999999999999888777764 47899999986

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.95  E-value=2.3e-28  Score=125.72  Aligned_cols=70  Identities=39%  Similarity=0.674  Sum_probs=65.0

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.+|.| ||++.++.++||+|.+. +|.|++.+ ..|+||.|||
T Consensus        11 Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LV   82 (100)
T 1r1p_A           11 WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWT-EKFPSLNKLV   82 (100)
T ss_dssp             TSCTTCCHHHHHHHHHTSCTTBEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSS-CEESSHHHHH
T ss_pred             ccccCCCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeC-CEeCCHHHHH
Confidence            99999999999999988899999999999999999 99999999999999986 57788874 7899999986

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.95  E-value=8.7e-28  Score=129.55  Aligned_cols=71  Identities=32%  Similarity=0.650  Sum_probs=66.7

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.++.| |||+.++.|+||+|...++.|++.+...|+||.+||
T Consensus        28 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~eLV   99 (138)
T 2crh_A           28 WYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELV   99 (138)
T ss_dssp             SBCCSCCHHHHHHHTTTSCTTEEEEECCSSTTCCCEEEEEETTEEEEEECEEETTEEESSTTCCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHhcCCCCCEEEEEECCCCCCCEEEEEEECCeEEEEEEEeCCCEEEECCCCccCCHHHHH
Confidence            99999999999999998899999999999889999 999999999999997667889998778999999986

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.95  E-value=7.6e-28  Score=125.74  Aligned_cols=70  Identities=33%  Similarity=0.696  Sum_probs=65.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||+|++.++.| ||++.++.++||+|.+. ++.|.++ ...|+||.|||
T Consensus        21 Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LV   92 (111)
T 2eo3_A           21 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIG-DQEFDHLPALL   92 (111)
T ss_dssp             HEEESCCHHHHHHHHSSCCTTCEEEEECSSSSSCEEEEEEETTEEEEEEEEEETTTEEEET-TCCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHhcCCCCceEEEEeecCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEEC-CcccCCHHHHH
Confidence            99999999999999998899999999999989999 99999999999999984 6789996 58999999986

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.95  E-value=3.9e-28  Score=126.37  Aligned_cols=71  Identities=37%  Similarity=0.556  Sum_probs=65.5

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+. .++|+||||.|++.++.| ||++.++.++||+|.+.++.|.+.+...|+||.|||
T Consensus         9 Wyhg~isr~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV   81 (109)
T 3tkz_A            9 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELV   81 (109)
T ss_dssp             SBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHH
T ss_pred             ceecCCCHHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEeCCCEEEecCCcccCCHHHHH
Confidence            99999999999999975 489999999999899999 999999999999998877788887778899999986

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.95  E-value=7e-28  Score=124.55  Aligned_cols=71  Identities=34%  Similarity=0.679  Sum_probs=64.5

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECC-----CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDD-----EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~-----~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.+ .++|+||||.|++.++.| ||++.++.++||+|.+. +|.|.+.+     ...|+||.|||
T Consensus         6 Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV   84 (104)
T 1d4t_A            6 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLI   84 (104)
T ss_dssp             TBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHH
T ss_pred             eEccCCCHHHHHHHHHhcCCCCEEEEeeCCCCCCCEEEEEEECCeEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHH
Confidence            99999999999999964 489999999999889999 99999999999999976 56888874     68899999986

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.95  E-value=1.1e-27  Score=123.93  Aligned_cols=71  Identities=32%  Similarity=0.535  Sum_probs=64.7

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||.|++.++.| ||++.     ++.|+||+|.+. +|.|++.+...|+||.+||
T Consensus         6 Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LI   85 (105)
T 1lkk_A            6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV   85 (105)
T ss_dssp             TBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHH
T ss_pred             eecCCCCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECCCceeCCHHHHH
Confidence            99999999999999974  589999999999989999 99998     578999999986 5789998778999999986

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.95  E-value=3.3e-27  Score=130.76  Aligned_cols=71  Identities=21%  Similarity=0.509  Sum_probs=67.3

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC-------CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE-------EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~-------~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||+|++.++.| ||++.++.++||+|.+.+|.|.+++.       ..|+||.+||
T Consensus        19 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~eLI   97 (169)
T 2c9w_A           19 WYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLI   97 (169)
T ss_dssp             CBCTTCCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHH
T ss_pred             ccccCCCHHHHHHHcCCCCCcEEEEecCCCCCCeEEEEEEECCeeEEEEEEEeCCEEEEccccCccccCCCCCCHHHHH
Confidence            99999999999999998899999999999989999 99999999999999998899999874       7899999986

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.95  E-value=4.2e-28  Score=125.09  Aligned_cols=70  Identities=30%  Similarity=0.597  Sum_probs=65.1

Q ss_pred             CcccCCCHHHHHHhhC-CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA-PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~-~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|. ..++|+||||.|++.++.| ||++.++.++||+|...++.|.+.+ ..|+||.|||
T Consensus         7 Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~-~~F~sl~~LV   78 (102)
T 2cia_A            7 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQ-RRFHTMDELV   78 (102)
T ss_dssp             TBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEECCSSSCEEEEEEEETTEEEETT-EEESSHHHHH
T ss_pred             cccCCCCHHHHHHHHhhCCCCcEEEEEECCCCCCCEEEEEEeCCeeEEEEEEecCCEEEECC-cCcCCHHHHH
Confidence            9999999999999994 5689999999999989999 9999999999999997788999985 7899999986

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.95  E-value=1.2e-27  Score=124.68  Aligned_cols=70  Identities=36%  Similarity=0.726  Sum_probs=64.2

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC------------------CeEEECCC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE------------------AHLTIDDE   61 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~------------------~~~~~~~~   61 (71)
                      ||||.|+|++||++|++.++|+||||+|++.+|.| ||++.++.++||+|.+.+                  +.|.++ .
T Consensus         2 Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~l~-~   80 (109)
T 1ju5_A            2 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIG-D   80 (109)
T ss_dssp             CEETTCCHHHHHHHHTTCCTTEEEEEECSSSTTEEEEEEECSSCEEEEEEECCSSSSCCCCCCSSCCTTCCCCCEEET-T
T ss_pred             ccccCCCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcccccccccccccccccEEEeC-C
Confidence            99999999999999998899999999999989999 999999999999998764                  357775 6


Q ss_pred             CCcCChhHhC
Q psy12414         62 EFFENLAQLV   71 (71)
Q Consensus        62 ~~F~sl~~Lv   71 (71)
                      ..|+||.|||
T Consensus        81 ~~F~sl~~LV   90 (109)
T 1ju5_A           81 QEFDSLPALL   90 (109)
T ss_dssp             EEESSHHHHH
T ss_pred             cccCCHHHHH
Confidence            8899999986

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.95  E-value=1.1e-27  Score=123.55  Aligned_cols=71  Identities=34%  Similarity=0.666  Sum_probs=64.5

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECC-----CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDD-----EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~-----~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.+ .++|+||||.|++.++.| ||++.++.++||+|.+. ++.|++..     ...|+||.|||
T Consensus         5 Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV   83 (103)
T 1i3z_A            5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELV   83 (103)
T ss_dssp             TEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHH
T ss_pred             cccCCCCHHHHHHHHhhcCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHH
Confidence            99999999999999964 689999999999999999 99999999999999975 57888873     58899999986

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.95  E-value=8.1e-28  Score=131.41  Aligned_cols=71  Identities=21%  Similarity=0.455  Sum_probs=66.7

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC-------CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE-------EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~-------~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||+|++.++.| ||++.++.++||+|.+.++.|.+.+.       ..|+||.+||
T Consensus        36 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV  114 (152)
T 2hmh_A           36 FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLV  114 (152)
T ss_dssp             SEETTCCHHHHHHHHHTSCTTEEEEEECCSTTCSEEEEEEETTEEEEEEEECGGGCBEECBCTTCSSCCCCBSSHHHHH
T ss_pred             CcCCCCCHHHHHHHhcCCCCCcEEEEeCCCCCCcEEEEEEcCCceEEEEEEecCCEEEEecccccccccCccCCHHHHH
Confidence            99999999999999988899999999999989999 99999999999999987788999865       8899999996

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.95  E-value=1.1e-27  Score=126.67  Aligned_cols=71  Identities=37%  Similarity=0.629  Sum_probs=65.3

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||.|++.++.| ||++.++.++||+|.++ ++.|++.+...|+||.|||
T Consensus        18 WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV   92 (121)
T 2dly_A           18 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFV   92 (121)
T ss_dssp             SBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEESSSCEEEEEEEECSSSCEEEETTEEESSHHHHH
T ss_pred             ccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEECCeEEEEEEEEcCCCCEEECCCCccCCHHHHH
Confidence            99999999999999874  488999999999999999 99999999999999985 6789998778999999986

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.95  E-value=2e-27  Score=125.34  Aligned_cols=71  Identities=38%  Similarity=0.740  Sum_probs=64.9

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECC-----CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDD-----EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~-----~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+. .++|+||||.|++.++.| ||++.++.|+||+|.+. ++.|++..     ...|+||.+||
T Consensus        12 WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~eLV   90 (119)
T 2ysx_A           12 WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLI   90 (119)
T ss_dssp             SEEESCCHHHHHHHHHHHCCTTEEEEEECSSCTTSEEEEEECSSCEEEEEEEECTTSCEEECCSCSSSCCCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHHhhcCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeccCCcCCcccCCHHHHH
Confidence            99999999999999975 789999999999989999 99999999999999985 57899975     37899999996

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.94  E-value=3.5e-27  Score=124.21  Aligned_cols=70  Identities=40%  Similarity=0.700  Sum_probs=64.1

Q ss_pred             CcccCCCHHHHHHhhCCC-CCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~-~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.. ++|+||||.|++.++.| ||++.++.++||+|.+. +|.|++.+ ..|+||.|||
T Consensus         8 WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~eLV   80 (117)
T 3ov1_A            8 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV-VKFNSLNELV   80 (117)
T ss_dssp             TBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS-CEESSHHHHH
T ss_pred             cccCCCCHHHHHHHHhCCCCCCcEEEEeCCCCCCCEEEEEecCCceEEEEEEECCCCeEEECC-CCcCCHHHHH
Confidence            999999999999999764 78999999999999999 99999999999999886 56888875 7999999986

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.94  E-value=3.1e-27  Score=125.47  Aligned_cols=70  Identities=30%  Similarity=0.612  Sum_probs=64.1

Q ss_pred             CcccCCCHHHHHHhhCCC-CCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~-~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++. ++|+||||+|+ .++.| ||++.++.++||+|.++++.|.+++...|+||.|||
T Consensus        21 WyhG~isR~eAe~lL~~~~~~G~FLVR~S~-~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV   92 (124)
T 2eob_A           21 WYYDRLSRGEAEDMLMRIPRDGAFLIRKRE-GTDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELV   92 (124)
T ss_dssp             TEESSCCHHHHHHHHHHCCSSSEEEEECCT-TSSCEEEEEEETTEEEEEEEEESSSCEESSSSCCBSSHHHHH
T ss_pred             CeecCCCHHHHHHHHhcCCCCCEEEEEecC-CCCCEEEEEEeCCeEEEEEEEECCCEEEECCCCcCCCHHHHH
Confidence            999999999999999765 68999999999 89999 999999999999999877788888666799999986

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.94  E-value=2.9e-27  Score=123.52  Aligned_cols=70  Identities=27%  Similarity=0.567  Sum_probs=64.3

Q ss_pred             CcccCCCHHHHHHhhCCC---CCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK---EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~---~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..   ++|+||||.|++.++.| ||++.++.++||+|.+. ++.|.++ ...|+||.+||
T Consensus        11 WyhG~isR~~Ae~lL~~~g~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LV   85 (111)
T 2hdv_A           11 WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQ-HLHFQSIFDML   85 (111)
T ss_dssp             TEEEECCHHHHHHHHHTTGGGGTTEEEEEECSSCTTEEEEEEEETTEEEEEEEEECTTCCEEET-TEEESSHHHHH
T ss_pred             CcCCCCCHHHHHHHHHHcCCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEeC-CceeCCHHHHH
Confidence            999999999999999754   89999999999999999 99999999999999985 5678887 68999999986

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.94  E-value=4.3e-28  Score=127.98  Aligned_cols=71  Identities=39%  Similarity=0.731  Sum_probs=65.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.++.| ||++.++.++||+|.+. ++.|++.+...|+||.|||
T Consensus        18 WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   90 (119)
T 2ecd_A           18 WYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELV   90 (119)
T ss_dssp             SEEEECCHHHHHHHHHTSCTTBEEEEEESSSTTEEEEEEECSSCEEEECCCCCSSSCCCCCSSCCCSSHHHHH
T ss_pred             cccCCCCHHHHHHHhcCCCCCeEEEEeCCCCCCCEEEEEEECCeEEEEEEEEcCCCCEEEcCCCcCCCHHHHH
Confidence            99999999999999988899999999999999999 99999999999999875 5678887778999999986

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.94  E-value=6.6e-27  Score=123.03  Aligned_cols=68  Identities=34%  Similarity=0.678  Sum_probs=63.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+  ++|+||||.|++.+|.| ||++.++.++||+|...++.|.+. ...|+||.|||
T Consensus        19 WyhG~isR~eAe~lL~--~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~y~~~-~~~F~sl~eLV   87 (116)
T 2kk6_A           19 WYHGAIPRIEAQELLK--KQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFE-GTGFSNIPQLI   87 (116)
T ss_dssp             TEEESCCHHHHHHTCC--STTCEEEEECTTCTTCEEEEEEETTEEEEEEEEEETTEEESS-SCEESCHHHHH
T ss_pred             CccCCCCHHHHHHHhc--cCCcEEEEECCCCCCcEEEEEEECCeEEEEEEEecCCEEEEC-CCEeCCHHHHH
Confidence            9999999999999998  79999999999999999 999999999999999878888886 58899999986

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.94  E-value=5.1e-28  Score=127.58  Aligned_cols=71  Identities=31%  Similarity=0.321  Sum_probs=65.6

Q ss_pred             CcccCCCHHHHHHhhC-CCCCceEEEEecCCCCCce-EEEEe----CCeEEEEEEEeeCCeEEECCCCCc--CChhHhC
Q psy12414          1 WFHGKISRETAESLLA-PKEDGLFLVRESTNFPQDF-MCVCF----ESKVEHYRVKYKEAHLTIDDEEFF--ENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~-~~~~G~fliR~s~~~~~~~-Ls~~~----~~~v~h~~I~~~~~~~~~~~~~~F--~sl~~Lv   71 (71)
                      ||||.|+|++||++|. ..++|+||||+|++.+|.| ||++.    ++.|+||+|.+.++.|++.....|  +||.+||
T Consensus        23 WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~g~~~i~~~~~F~~~sL~eLV  101 (118)
T 2el8_A           23 SCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVV  101 (118)
T ss_dssp             TTCCCCCHHHHHHHHHHSSTTCSBEEEECCSSSSSEEEEECCCBTTBCCCEEECBCCBTTBCCBSSSSCCCCSSHHHHH
T ss_pred             ceecCCCHHHHHHHHhhCCCCcEEEEeeCCCCCCceEEEEEEecCCCCcEEEEEEEEcCCEEEEeCCCeECCCCHHHHH
Confidence            9999999999999995 4589999999999999999 99999    789999999987889999877889  9999986

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.94  E-value=2e-27  Score=124.50  Aligned_cols=71  Identities=34%  Similarity=0.509  Sum_probs=65.1

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||.|++.++.| ||++.    ++.++||+|.+. ++.|++.+...|+||.|||
T Consensus        14 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   92 (114)
T 1blj_A           14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALV   92 (114)
T ss_dssp             SBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEcCCCCEEECCCcccCCHHHHH
Confidence            99999999999999974  589999999999999999 99998    689999999986 5789998778999999986

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.94  E-value=8.5e-27  Score=120.63  Aligned_cols=71  Identities=37%  Similarity=0.798  Sum_probs=61.3

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee--CC--eEEECC-CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK--EA--HLTIDD-EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~--~~--~~~~~~-~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||.|++.++.| ||++.++.|+||+|.+.  +|  .|.+++ ...|+||.+||
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV   85 (105)
T 1nrv_A            7 WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLV   85 (105)
T ss_dssp             TBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEeCCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHHH
Confidence            99999999999999964  489999999999989999 99999999999999875  34  255653 48899999986

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.94  E-value=3.6e-27  Score=126.20  Aligned_cols=71  Identities=30%  Similarity=0.611  Sum_probs=64.3

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeC---------------CeEEEEEEEeeCCeEEE---CCC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFE---------------SKVEHYRVKYKEAHLTI---DDE   61 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~---------------~~v~h~~I~~~~~~~~~---~~~   61 (71)
                      ||||.|+|++||++|++.++|+||||+|++.+|.| |||+..               +.|+||+|.+.+++|++   ...
T Consensus        22 Wyhg~isR~eAe~lL~~~~~G~FLVR~S~s~~g~y~LSv~~~~~~~~~~~~~g~~~~~~v~H~~I~~~~~g~~l~g~~~~  101 (131)
T 2kno_A           22 WYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGVKIKGCPSE  101 (131)
T ss_dssp             HBCTTCCHHHHHHHHTTSCTTBEEEEECSSSTTEEEEEEECSCCSSSSSSCCSCHHHHHEEEEEEECCSSCCCEETCSSC
T ss_pred             ceecCCCHHHHHHHhcCCCCCeEEEecCCCCCCCEEEEEEeCCCCcccccccccccCCceEEEEEEECCCCCEEecCCCC
Confidence            99999999999999988899999999999999999 999986               37999999987666888   456


Q ss_pred             CCcCChhHhC
Q psy12414         62 EFFENLAQLV   71 (71)
Q Consensus        62 ~~F~sl~~Lv   71 (71)
                      ..|+||.+||
T Consensus       102 ~~F~SL~eLV  111 (131)
T 2kno_A          102 PYFGSLSALV  111 (131)
T ss_dssp             CCCCSHHHHH
T ss_pred             CccCCHHHHH
Confidence            8899999986

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.94  E-value=6.7e-27  Score=120.94  Aligned_cols=68  Identities=37%  Similarity=0.615  Sum_probs=62.5

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+  ++|+||||.|++.++.| ||++.++.++||+|...+|.|.+. ...|+||.|||
T Consensus         9 Wyhg~isR~~Ae~lL~--~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~~~-~~~F~sl~~LI   77 (104)
T 1mil_A            9 WFHGKLSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK-DHRFESVSHLI   77 (104)
T ss_dssp             TBCSSCCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECS-SCEESSHHHHH
T ss_pred             cCCCCCCHHHHHHHhc--cCCcEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCEEEEC-CceeCCHHHHH
Confidence            9999999999999998  79999999999989999 999999999999997556778775 58899999986

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.94  E-value=4.9e-27  Score=123.93  Aligned_cols=70  Identities=36%  Similarity=0.558  Sum_probs=64.2

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEEC-CCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTID-DEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~-~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.++ | ||++.++.|+||+|.+. +|.|++. ....|+||.|||
T Consensus        18 WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~~-y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV   90 (119)
T 2cs0_A           18 WFHGAISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALV   90 (119)
T ss_dssp             SBCSSCCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHH
T ss_pred             ccccCCCHHHHHHHhcCCCCCEEEEEecCCCCC-EEEEEEECCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHH
Confidence            999999999999999888999999999998888 9 99999999999999987 4588886 468899999986

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.94  E-value=1.5e-27  Score=131.58  Aligned_cols=71  Identities=21%  Similarity=0.445  Sum_probs=66.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC-------CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE-------EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~-------~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||+|++.++.| ||++.++.++||+|.+.++.|.+.+.       ..|+||.+||
T Consensus        25 WyhG~IsR~eAe~lL~~~~~GtFLVR~S~s~~g~y~LSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV  103 (164)
T 2bbu_A           25 FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLV  103 (164)
T ss_dssp             CCCTTSCHHHHHHHHHHSSTTCCEEEECSTTSCCEEEEECCTTCCEEEECEEETTEEESSSCCCCCSSCTTCCHHHHHH
T ss_pred             ccCCCCCHHHHHHHhcCCCCCCEEEEECCCCCCCEEEEEEECCceEEEEEEeCCCeEEEecCcccccCCCccCCHHHHH
Confidence            99999999999999987899999999999989999 99999999999999988899999865       7899999986

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.94  E-value=2.9e-26  Score=122.00  Aligned_cols=71  Identities=38%  Similarity=0.706  Sum_probs=62.7

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee--CCeEEE--CC-CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK--EAHLTI--DD-EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~--~~~~~~--~~-~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++  +++|+||||+|++.++.| ||++.++.|+||+|.+.  +|.|++  ++ ...|+||.|||
T Consensus        28 WyhG~isR~eAe~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL~eLV  106 (126)
T 2aug_A           28 WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLV  106 (126)
T ss_dssp             TEETTCCHHHHHHHHHTTTCCTTEEEEEECSSSSCCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSSCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHHhccCCCCCEEEEeecCCCCCCEEEEEEcCCeEEEEEEEEECCCCeEEEEeCCCCCccCCHHHHH
Confidence            99999999999999975  379999999999989999 99999999999999874  576655  43 57899999986

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.94  E-value=4.7e-27  Score=122.49  Aligned_cols=70  Identities=33%  Similarity=0.650  Sum_probs=62.8

Q ss_pred             CcccCCCHHHHHHhhCCC-CCceEEEEecCCCCCce-EEEEe------CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~-~~G~fliR~s~~~~~~~-Ls~~~------~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.. ++|+||||.| +.++.| ||++.      ++.|+||+|.+. ++.|++.+...|+||.+||
T Consensus        13 Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   91 (110)
T 2ekx_A           13 WFAGNISRSQSEQLLRQKGKEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLI   91 (110)
T ss_dssp             SBCCSCCHHHHHHHHHHTCCTTEEEEEEC-SSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESSTTCCCSCHHHHH
T ss_pred             eecCCCCHHHHHHHHhccCCCceEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECCCCccCCHHHHH
Confidence            999999999999999755 8999999999 569999 99996      468999999987 4679998778999999986

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.94  E-value=5.3e-27  Score=125.11  Aligned_cols=71  Identities=34%  Similarity=0.679  Sum_probs=64.4

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECC-----CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDD-----EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~-----~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.+ .++|+||||.|++.++.| ||++.++.++||+|.+. +|.|.+..     ...|+||.+||
T Consensus         6 WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV   84 (128)
T 1ka6_A            6 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLI   84 (128)
T ss_dssp             SBCCSCCHHHHHHHHHHHCCTTCEEEEECSSSTTCEEEEEESSSCEEEEEEEECTTSCEEEECSTTSCCCEESSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhcCCCCCEEEEeecCCCCCCEEEEEEeCCEEEEEEEEECCCCeEEEeecCCCCCCccCCHHHHH
Confidence            99999999999999963 589999999999889999 99999999999999976 56888874     58899999986

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.94  E-value=1.5e-27  Score=123.54  Aligned_cols=71  Identities=32%  Similarity=0.583  Sum_probs=64.5

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||.|++.++.| ||++.     ++.|+||+|.+. ++.|++.+...|+||.|||
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   86 (106)
T 1aot_F            7 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV   86 (106)
T ss_dssp             SCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEETTEEESSHHHHH
T ss_pred             cCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECCCCccCCHHHHH
Confidence            99999999999999864  589999999999989999 99996     679999999987 5789998778999999986

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.94  E-value=1.6e-26  Score=121.46  Aligned_cols=71  Identities=48%  Similarity=0.858  Sum_probs=60.7

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee--CCe--EEECC-CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK--EAH--LTIDD-EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~--~~~--~~~~~-~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.  .++|+||||.|++.++.| ||++.++.++||+|.+.  +|.  |.+++ ...|+||.|||
T Consensus        16 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV   94 (117)
T 3pqz_A           16 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLV   94 (117)
T ss_dssp             TBCCSCCHHHHHHHHHHTTCCTTEEEEEECCC-CCCEEEEEEETTEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHHhcCCCCCCEEEEEecCCCCCcEEEEEEeCCeeEEEEEEEecCCCCEEEEECCCCcccCCHHHHH
Confidence            99999999999999964  579999999999989999 99999999999999985  454  33333 47899999986

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.94  E-value=1.5e-26  Score=122.99  Aligned_cols=70  Identities=24%  Similarity=0.575  Sum_probs=63.1

Q ss_pred             CcccCCCHHHHHHhhCCC-CCceEEEEecCCCCCce-EEEEe------CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~-~~G~fliR~s~~~~~~~-Ls~~~------~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.. ++|+||||.| +.++.| ||++.      ++.|+||+|.+. +|.|++.+...|+||.+||
T Consensus        13 WyhG~isR~eAe~lL~~~g~~G~FLVR~S-s~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV   91 (125)
T 2ge9_A           13 WYSKHMTRSQAEQLLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELI   91 (125)
T ss_dssp             SEETTCCHHHHHHHHHHHTCTTEEEEEEC-SSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESSTTSCBSSHHHHH
T ss_pred             ccccCCCHHHHHHHHhhcCCCceEEEEec-CCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECCCCcCCCHHHHH
Confidence            999999999999999754 8999999999 679999 99997      479999999987 4679998778999999996

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.94  E-value=2.9e-26  Score=123.56  Aligned_cols=71  Identities=39%  Similarity=0.747  Sum_probs=64.8

Q ss_pred             CcccCC-CHHHHHHhhCC------CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-C-C--eEEECCCCCcCChh
Q psy12414          1 WFHGKI-SRETAESLLAP------KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-E-A--HLTIDDEEFFENLA   68 (71)
Q Consensus         1 w~~g~i-~r~~a~~~L~~------~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~-~--~~~~~~~~~F~sl~   68 (71)
                      ||||.| +|++||++|+.      .++|+||||.|++.++.| ||++.++.|+||+|.+. + +  .|++.+...|+||.
T Consensus        24 WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~~l~~~~~F~sl~  103 (138)
T 2dx0_A           24 WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIY  103 (138)
T ss_dssp             TBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSCBSSHH
T ss_pred             cccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEECCeEEEEEEEEecCCCceEEEeCCCCcCCCHH
Confidence            999999 89999999973      699999999999889999 99999999999999876 3 3  68888789999999


Q ss_pred             HhC
Q psy12414         69 QLV   71 (71)
Q Consensus        69 ~Lv   71 (71)
                      +||
T Consensus       104 eLI  106 (138)
T 2dx0_A          104 ALI  106 (138)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            996

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.93  E-value=2.9e-26  Score=121.18  Aligned_cols=70  Identities=19%  Similarity=0.292  Sum_probs=61.8

Q ss_pred             CcccCCCHHHHHHhhC-CCCCceEEEEecCCCCCce-EEEEe---CCeEEEEEEEeeCCeEEECC--CCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA-PKEDGLFLVRESTNFPQDF-MCVCF---ESKVEHYRVKYKEAHLTIDD--EEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~-~~~~G~fliR~s~~~~~~~-Ls~~~---~~~v~h~~I~~~~~~~~~~~--~~~F~sl~~Lv   71 (71)
                      ||+|.|+|.+||.+|. .+++|+||||+|++.+ .| |||+.   .+.|+||+|.+.+|+|+|..  ...|+||.|||
T Consensus        17 Wff~~isR~eAE~lL~~~~~~GaFLVR~Se~~~-~ySLSVR~~~~~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV   93 (125)
T 3maz_A           17 ACFYTVSRKEATEMLQKNPSLGNMILRPGSDSR-NYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVI   93 (125)
T ss_dssp             TTBCCCCHHHHHHHHHHCGGGCSEEEEECTTSS-SEEEEEEECSSSCEEEEEEEEEETTEEEECSSSCEEESSHHHHH
T ss_pred             CCcCCCCHHHHHHHHhccCCCCcEEEEeCCCCC-CEEEEEEecCCCCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHH
Confidence            9999999999999885 4568999999998765 89 99998   57999999999888999984  45799999986

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.93  E-value=1e-26  Score=122.70  Aligned_cols=70  Identities=26%  Similarity=0.600  Sum_probs=64.0

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+. .++|+||||.|++.++.| ||++.++.++||+|.+. ++.|+++ ...|+||.|||
T Consensus        18 WyhG~isR~~Ae~lL~~~g~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LI   90 (119)
T 2gsb_A           18 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMG-GRYYNSIGDII   90 (119)
T ss_dssp             SBCCSSCHHHHHHHHHHTCCSSEEEEEECSSSTTCEEEEEECSSCBCCCCEEEETTTEEEES-SCCBSCHHHHH
T ss_pred             cccCCCCHHHHHHHHhhcCCCCeEEEEeCCCCCCceEEEEEECCEEEEEEEEEcCCCCEEEC-CcccCCHHHHH
Confidence            99999999999999975 478999999999989999 99999999999999986 5788887 47899999986

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.93  E-value=6.6e-26  Score=127.19  Aligned_cols=71  Identities=24%  Similarity=0.342  Sum_probs=65.0

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC----CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE----EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~----~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.+.++|+||||+|++.++.| ||++.++.++||+|.+.++.|.+...    ..|+||.+||
T Consensus        36 WYhG~isR~eAE~lL~~~~dGtFLVR~S~~~~~~lsLSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~F~SL~eLV  111 (187)
T 2izv_A           36 CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLL  111 (187)
T ss_dssp             TEEEECCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHH
T ss_pred             ccccCCCHHHHHHHhcCCCCCcEEEEECCCCCceEEEEEeeCCeEEEEEEEECCCEEEEeccCCCccccCCHHHHH
Confidence            99999999999999988899999999999767778 99999999999999999899999854    3799999986

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.93  E-value=3.3e-26  Score=120.35  Aligned_cols=70  Identities=29%  Similarity=0.630  Sum_probs=62.3

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeC------CeEEEEEEE--ee-CCeEEECCCCCcCChhH
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFE------SKVEHYRVK--YK-EAHLTIDDEEFFENLAQ   69 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~------~~v~h~~I~--~~-~~~~~~~~~~~F~sl~~   69 (71)
                      ||||.|+|++||++|+. .++|+||||.| +.++.| ||++..      +.|+||+|.  +. ++.|++.+...|+||.+
T Consensus        11 Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~sl~~   89 (118)
T 3s9k_A           11 WYNKSISRDKAEKLLLDTGKEGAFMVRDS-RTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL   89 (118)
T ss_dssp             TBCTTCCHHHHHHHHHHHCCTTCEEEEEC-SSTTCEEEEEEECCSCSSSCEEEEEEEEECSCSSCCEEEECSCCCSCHHH
T ss_pred             eecCCCCHHHHHHHHHhcCCCCeEEEEee-CCCCCEEEEEEecccccCCCceEEEEEeEEECCCCCEEECCCcccCCHHH
Confidence            99999999999999975 47999999999 889999 999996      899999994  33 56788887789999999


Q ss_pred             hC
Q psy12414         70 LV   71 (71)
Q Consensus        70 Lv   71 (71)
                      ||
T Consensus        90 LV   91 (118)
T 3s9k_A           90 LI   91 (118)
T ss_dssp             HH
T ss_pred             HH
Confidence            86

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.93  E-value=6.7e-26  Score=118.85  Aligned_cols=67  Identities=28%  Similarity=0.591  Sum_probs=62.1

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+  ++|+||||.|++.+ .| ||++.++.++||+|...++.|.+. ...|+||.+||
T Consensus        18 WyhG~isR~eAe~lL~--~~G~FLVR~S~~~~-~y~LSv~~~~~v~H~~I~~~~g~~~~~-~~~F~sl~~LV   85 (114)
T 1wqu_A           18 WYHGAIPRAEVAELLV--HSGDFLVRESQGKQ-EYVLSVLWDGLPRHFIIQSLDNLYRLE-GEGFPSIPLLI   85 (114)
T ss_dssp             TEEESCCHHHHHTTCC--STTEEEEEECSSSC-CEEEEEEETTEEEEEECEECSSSEESS-SCCBSSHHHHH
T ss_pred             cEeeCCCHHHHHHHhc--cCCeEEEEEcCCCC-CEEEEEEECCEEEEEEEEecCCEEEEC-CCCCCCHHHHH
Confidence            9999999999999998  69999999999877 99 999999999999998888888876 58899999986

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.93  E-value=1.9e-26  Score=122.49  Aligned_cols=70  Identities=29%  Similarity=0.693  Sum_probs=62.4

Q ss_pred             CcccCCCHHHHHHhhCCC-CCceEEEEecCCCCCce-EEEEe------CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~-~~G~fliR~s~~~~~~~-Ls~~~------~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.. ++|+||||.| +.++.| |||+.      ++.|+||+|.+. ++.|++.+...|+||.+||
T Consensus        18 WyhG~isR~eAe~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV   96 (125)
T 2dm0_A           18 WYHRNITRNQAEHLLRQESKEGAFIVRDS-RHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPELI   96 (125)
T ss_dssp             SBCCSCCHHHHHHHHHHHCSTTCBCEEEE-TTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSSSCCCSSHHHHH
T ss_pred             cccCCCCHHHHHHHHhhcCCCCEEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECCCCccCCHHHHH
Confidence            999999999999999754 8999999999 678999 99998      458999999987 4678988778999999996

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.92  E-value=5.7e-26  Score=122.79  Aligned_cols=71  Identities=28%  Similarity=0.631  Sum_probs=62.3

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCC--CCCce-EEEEeCCeEEEEEEEee-CCe-EEECC----CCCcCChhHh
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTN--FPQDF-MCVCFESKVEHYRVKYK-EAH-LTIDD----EEFFENLAQL   70 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~--~~~~~-Ls~~~~~~v~h~~I~~~-~~~-~~~~~----~~~F~sl~~L   70 (71)
                      ||||.|+|++||++|.. .++|+||||+|++  .++.| |||+.++.|+||+|.+. ++. |.++.    ...|+||.||
T Consensus        25 WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~sl~eL  104 (141)
T 2eo6_A           25 WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEI  104 (141)
T ss_dssp             SEEESCCHHHHHHHHHHHCCTTCBCEEECSTTCSSCSEEEEEEETTEEEEEEECEETTTTEECSSSCCTTCCCBSSHHHH
T ss_pred             eEecCCCHHHHHHHhhccCCCceEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEeCCCCEEEEccccCCCCccCCHHHH
Confidence            99999999999999963 6899999999986  68999 99999999999999875 555 67763    5889999999


Q ss_pred             C
Q psy12414         71 V   71 (71)
Q Consensus        71 v   71 (71)
                      |
T Consensus       105 V  105 (141)
T 2eo6_A          105 V  105 (141)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.92  E-value=6.3e-25  Score=127.78  Aligned_cols=71  Identities=27%  Similarity=0.455  Sum_probs=65.8

Q ss_pred             CcccCCCHHHHHHhh--CCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L--~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|  ...++|+||||.|++.++.| ||++.++.++||+|.+. ++.|++.+...|+||.+||
T Consensus         8 Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   82 (254)
T 2oq1_A            8 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELC   82 (254)
T ss_dssp             TBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEECCeEEEEEEEEeCCCCEEeCCCCccCCHHHHH
Confidence            999999999999999  45689999999999999999 99999999999999984 6789998778999999986

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.92  E-value=8.1e-25  Score=127.32  Aligned_cols=71  Identities=32%  Similarity=0.574  Sum_probs=65.7

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.  ..++|+||||+|++.++.| ||++.++.++||+|.+. +|.|.+.+...|+||.|||
T Consensus         7 Wy~g~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv   81 (254)
T 1a81_A            7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLC   81 (254)
T ss_dssp             TBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEECCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHH
Confidence            9999999999999994  4689999999999999999 99999999999999985 6789998789999999986

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.92  E-value=2.4e-25  Score=129.18  Aligned_cols=71  Identities=39%  Similarity=0.733  Sum_probs=64.5

Q ss_pred             CcccCC-----CHHHHHHhhC------CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCC----eEEECCCCCc
Q psy12414          1 WFHGKI-----SRETAESLLA------PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA----HLTIDDEEFF   64 (71)
Q Consensus         1 w~~g~i-----~r~~a~~~L~------~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~----~~~~~~~~~F   64 (71)
                      ||||.|     +|++||++|+      ..++|+||||+|++.+|.| ||++.++.|+||+|...++    .|++.+...|
T Consensus         6 WfhG~i~~~~~sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~F   85 (246)
T 4fbn_A            6 WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVF   85 (246)
T ss_dssp             TBCCCCSCC-CHHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEECGGGCCEEEEETTEEE
T ss_pred             CcCCccccccCCHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEECCEEEEEEEEEECCCCceeEEecCCccc
Confidence            999999     7999999995      4689999999999999999 9999999999999987642    5888888899


Q ss_pred             CChhHhC
Q psy12414         65 ENLAQLV   71 (71)
Q Consensus        65 ~sl~~Lv   71 (71)
                      +||.|||
T Consensus        86 ~sl~~LV   92 (246)
T 4fbn_A           86 DSLYDLI   92 (246)
T ss_dssp             SSHHHHH
T ss_pred             CCHHHHH
Confidence            9999996

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.91  E-value=1.1e-24  Score=121.00  Aligned_cols=71  Identities=32%  Similarity=0.535  Sum_probs=64.5

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||.|++.++.| ||++.     ++.++||+|.+. ++.|++.+...|+||.+||
T Consensus        76 w~~g~isr~~ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV  155 (175)
T 4d8k_A           76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV  155 (175)
T ss_dssp             TBCSSCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESSTTSEESSHHHHH
T ss_pred             eecCcccHHHHHHHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECCCCccCCHHHHH
Confidence            99999999999999964  579999999999999999 99998     779999999886 5788888778999999986

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.91  E-value=1.6e-24  Score=128.50  Aligned_cols=70  Identities=30%  Similarity=0.571  Sum_probs=64.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC-CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE-EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~-~~F~sl~~Lv   71 (71)
                      ||||.|+|.+|+.+|...++|+||||.| +.+|.| |||+.++.|+||+|.+.+++|++... ..|+||.+||
T Consensus       196 WyhG~IsR~eAE~lL~~~~~GtFLVR~S-s~~g~y~LSv~~~~~V~H~rI~~~~~g~~~~~~~~~F~SL~eLV  267 (302)
T 2y3a_B          196 WYVGKINRTQAEEMLSGKRDGTFLIRES-SQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELV  267 (302)
T ss_dssp             TBCCSCCHHHHHHHHTTSCTTBEEBCCC-SSTTCEEEEEECSSSEEEEEEEEETTEEESBTTBCCCSSHHHHH
T ss_pred             ccCCCCCHHHHHHHhcCCCCCcEEEEec-cCCCceEEEEEeCCeeEEEEEEECCCceEEeCCCCCCCCHHHHH
Confidence            9999999999999998889999999999 889999 99999999999999998888777654 7899999986

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.91  E-value=2.7e-24  Score=125.11  Aligned_cols=70  Identities=30%  Similarity=0.550  Sum_probs=64.3

Q ss_pred             CcccCCCHHHHHHhhCCC--CCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK--EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~--~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..  ++|+||||.| +.++.| ||++.++.++||+|.++ +|.|++.+...|+||.+||
T Consensus       161 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV  234 (254)
T 2oq1_A          161 WYHSSLTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLV  234 (254)
T ss_dssp             TBCSSCCHHHHHHHHHSSCCCTTEEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHH
T ss_pred             ccccCCCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEECCeEEEEEEEEcCCCCEEECCCceECCHHHHH
Confidence            999999999999999753  8999999999 789999 99999999999999986 5788888779999999986

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.91  E-value=1.1e-24  Score=132.14  Aligned_cols=71  Identities=24%  Similarity=0.479  Sum_probs=66.6

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCC-CCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNF-PQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~-~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+.+|...++|+||||.|++. +|.| ||++.++.++||+|.+.++.|++.+...|+||.+||
T Consensus        12 WYhG~IsR~eAE~lL~~~~dG~FLVR~S~s~~~g~y~LSvr~~~~v~H~rI~~~~g~y~l~~~~~F~SL~eLV   84 (373)
T 3hhm_B           12 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELI   84 (373)
T ss_dssp             TEEESCCHHHHHHHTTTCCTTEEEEEECSCC--CCEEEEEEETTEEEEEEECCSSSCBCSSSSCCBSSSHHHH
T ss_pred             ccCCCCCHHHHHHHhcCCCCCCEEEeccCCCCCCCEEEEEEECCeeEEEEEEecCCeEEeCCCCCcCCHHHHH
Confidence            9999999999999999889999999999988 9999 999999999999999888899998778999999986

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.91  E-value=3.3e-24  Score=124.74  Aligned_cols=70  Identities=41%  Similarity=0.768  Sum_probs=64.4

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.  .++|+||||.| +.++.| ||++.++.++||+|.+. +|.|++.+...|+||.+||
T Consensus       160 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV  233 (254)
T 1a81_A          160 WFHGKISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV  233 (254)
T ss_dssp             TEEEECCHHHHHHHHHSSCCCTTCEEEEEC-SSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHH
T ss_pred             ccccCCCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEECCEEEEEEEEEcCCCCEEecCCcccCCHHHHH
Confidence            99999999999999975  38999999999 789999 99999999999999986 5788887779999999986

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.91  E-value=2.1e-25  Score=128.26  Aligned_cols=70  Identities=36%  Similarity=0.726  Sum_probs=63.7

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC------------------CeEEECCC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE------------------AHLTIDDE   61 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~------------------~~~~~~~~   61 (71)
                      ||||.|+|++||++|+..++|+||||+|++.++.| ||++.++.|+||+|.+.+                  +.|.+. .
T Consensus        15 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~   93 (230)
T 2dvj_A           15 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIG-D   93 (230)
T ss_dssp             SCCSSCCTTHHHHHHTTSSSSCBEEECCSSCTTSCEEECCCSSSCCCEECBCCCSCCSSSSSSSSTTTSCCCCCEESS-S
T ss_pred             cccCCCCHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCCcccccccccccccccceEEEeC-C
Confidence            99999999999999988899999999999999999 999999999999998764                  356664 6


Q ss_pred             CCcCChhHhC
Q psy12414         62 EFFENLAQLV   71 (71)
Q Consensus        62 ~~F~sl~~Lv   71 (71)
                      ..|+||.+||
T Consensus        94 ~~F~sl~~LV  103 (230)
T 2dvj_A           94 QEFDSLPALL  103 (230)
T ss_dssp             CEESSHHHHH
T ss_pred             ceeCCHHHHH
Confidence            8899999996

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.90  E-value=5.5e-24  Score=118.03  Aligned_cols=69  Identities=30%  Similarity=0.530  Sum_probs=61.5

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCe---EEEEEEEe---e-C----CeEEECCCCCcCC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESK---VEHYRVKY---K-E----AHLTIDDEEFFEN   66 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~---v~h~~I~~---~-~----~~~~~~~~~~F~s   66 (71)
                      ||||.|+|++||++|+.  .++|+||||.| +.++.| ||++.++.   |+||+|.+   . +    +.|.++ ...|+|
T Consensus        14 Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~~~~~~~-~~~F~s   91 (174)
T 3qwx_X           14 FYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIA-NQSFPD   91 (174)
T ss_dssp             GEETTCCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEECCSSSSCEEEEEEEECCCCTTSSSCCCEEET-TEEESS
T ss_pred             CccCCCCHHHHHHHHhccCCCCCeEEEEec-CCCCCEEEEEEECCCCCceEEEEEEeccCCCCCcccceEEEC-CeecCc
Confidence            99999999999999965  56899999999 889999 99999888   99999987   3 3    478886 789999


Q ss_pred             hhHhC
Q psy12414         67 LAQLV   71 (71)
Q Consensus        67 l~~Lv   71 (71)
                      |.+||
T Consensus        92 l~eLv   96 (174)
T 3qwx_X           92 IPALL   96 (174)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.89  E-value=4.6e-23  Score=130.67  Aligned_cols=71  Identities=27%  Similarity=0.455  Sum_probs=65.6

Q ss_pred             CcccCCCHHHHHHhh--CCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L--~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|  ...++|+||||+|++.+|.| ||++.++.++||+|.+. ++.|++.+...|+||.+||
T Consensus        10 W~~g~i~r~~ae~~L~~~~~~~G~fLvR~s~~~~g~~~ls~~~~~~~~h~~i~~~~~g~~~~~~~~~f~sl~~Lv   84 (613)
T 2ozo_A           10 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELC   84 (613)
T ss_dssp             TBCBSCCHHHHHHHHHTTTCCTTEEEEEECTTBTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             CcCccCCHHHHHHHHhccCCCCCeEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcEEECCCCCcCCHHHHH
Confidence            999999999999999  45688999999999999999 99999999999999976 5789998888899999986

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.89  E-value=2.3e-24  Score=127.99  Aligned_cols=70  Identities=36%  Similarity=0.727  Sum_probs=63.5

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEe------------------eCCeEEECCC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY------------------KEAHLTIDDE   61 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~------------------~~~~~~~~~~   61 (71)
                      ||||.|+|++||++|+..++|+||||.|++.++.| ||++.++.|+||+|.+                  .++.|.+. .
T Consensus        13 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   91 (304)
T 2eyz_A           13 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIG-D   91 (304)
T ss_dssp             SCCCCCCSSHHHHTTTTCCSSCEECCSCCSSSSCCEEEECSSSSCEEEECCCCSSCCSSCCCCCCCSSSSSCCCCCBT-T
T ss_pred             CccCCCCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEeeccccccccccccccccccCCCeEEeC-C
Confidence            99999999999999988899999999999999999 9999999999999988                  34566665 6


Q ss_pred             CCcCChhHhC
Q psy12414         62 EFFENLAQLV   71 (71)
Q Consensus        62 ~~F~sl~~Lv   71 (71)
                      ..|+||.+||
T Consensus        92 ~~F~sl~~LV  101 (304)
T 2eyz_A           92 QEFDSLPALL  101 (304)
T ss_dssp             BCCSCHHHHH
T ss_pred             cEECCHHHHH
Confidence            7999999996

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.89  E-value=5e-23  Score=131.01  Aligned_cols=71  Identities=32%  Similarity=0.580  Sum_probs=65.9

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||+|++.+|.| ||++.++.++||+|.+. ++.|++.+...|+||.+||
T Consensus        15 Wy~g~isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~f~sl~~Lv   89 (635)
T 4fl3_A           15 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLC   89 (635)
T ss_dssp             TBCBSCCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEEeCCEEEeEEEEEcCCCCEEeCCCCccCCHHHHH
Confidence            99999999999999964  579999999999999999 99999999999999987 5789998888999999986

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.88  E-value=7.4e-23  Score=126.83  Aligned_cols=68  Identities=37%  Similarity=0.672  Sum_probs=62.1

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.. ++|+||||+|++.+|.| ||++.++.|+||+|.+ +|.|+++ ...|+||.|||
T Consensus        53 w~hg~i~r~~ae~lL~~-~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~-~g~~~~~-~~~F~sl~~Lv  121 (463)
T 3cxl_A           53 EFHGMISREAADQLLIV-AEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYY-DGKHFVG-EKRFESIHDLV  121 (463)
T ss_dssp             TBCCSCCHHHHHHHHTT-STTEEEEEECSSSTTCEEEEEECSSSEEEEECEE-SSSEESS-SCCBSCHHHHH
T ss_pred             ccccCCCHHHHHHHHcC-CCCeEEEeccCCCCCCEEEEEEECCEEEEEEEec-CCeEEEC-CCccCCHHHHH
Confidence            67999999999999964 68999999999999999 9999999999999987 7788886 47899999986

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.88  E-value=4.4e-23  Score=129.36  Aligned_cols=71  Identities=34%  Similarity=0.519  Sum_probs=65.5

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.. .++|+||||.|++.+|.| ||++.++.++||+|.+.++.|.+.+...|+||.+||
T Consensus         4 Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv   76 (532)
T 2b3o_A            4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELV   76 (532)
T ss_dssp             TBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSSSEEEEEEEETTEEEEEEEECSSSCEEETTSCEESCHHHHH
T ss_pred             ceeCCCCHHHHHHHHHhcCCCCCEEEecCCCCCCceEEEEEECCEEEEEEEEecCCEEEECCCcccCCHHHHH
Confidence            99999999999999975 389999999999999999 999999999999998877788887778899999986

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.81  E-value=1.6e-24  Score=128.60  Aligned_cols=70  Identities=33%  Similarity=0.696  Sum_probs=64.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.++.| ||++.++.++||+|.+. ++.|.+. ...|+||.+||
T Consensus        14 Wyhg~isR~~Ae~lL~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~-~~~F~sl~~Lv   85 (303)
T 2lqn_A           14 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIG-DQEFDHLPALL   85 (303)
Confidence            99999999999999988899999999999999999 99999999999999985 5567776 48899999997

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.88  E-value=5.5e-23  Score=128.78  Aligned_cols=71  Identities=35%  Similarity=0.533  Sum_probs=65.9

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.. .++|+||||+|++.+|.| ||++.++.++||+|...++.|.+.+...|+||.|||
T Consensus         6 Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLv   78 (525)
T 2shp_A            6 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELV   78 (525)
T ss_dssp             TBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHH
T ss_pred             cccCCCCHHHHHHHHHhCCCCCcEEeeccCCCCCcEEEEEEECCEEEEEEEEecCCeEEECCCCeECCHHHHH
Confidence            99999999999999964 489999999999999999 999999999999998877889898788999999986

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.88  E-value=6.1e-23  Score=130.12  Aligned_cols=71  Identities=34%  Similarity=0.519  Sum_probs=66.4

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.. .++|+||||.|++.+|.| ||++.++.|+||+|...++.|++.+...|+||.|||
T Consensus         4 Wy~g~isr~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~eLv   76 (595)
T 3ps5_A            4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELV   76 (595)
T ss_dssp             CCCSSCCHHHHHHHHHHHCCTTCEEEEECSSSTTSEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhCCCCCEEEEeecCCCCCceEEEEEECCEEEEEEEEeCCCcEEEecCccccchhhhh
Confidence            99999999999999964 489999999999999999 999999999999999888899998888999999986

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.88  E-value=1.6e-22  Score=117.34  Aligned_cols=69  Identities=32%  Similarity=0.661  Sum_probs=61.5

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.. ..+|+||||.| +.++.| ||++.++.|+||+|.++++.|.++ ...|+||.+||
T Consensus       124 Wyhg~isr~~Ae~lL~~~~~~G~FLVR~s-~~~g~y~Lsv~~~~~v~H~~I~~~~~~~~~~-~~~F~sL~~Lv  194 (246)
T 4fbn_A          124 WYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEGKIKHCRVQQEGQTVMLG-NSEFDSLVDLI  194 (246)
T ss_dssp             TEESSCCHHHHHHHHHTSCCTTEEEEEEC-SSTTEEEEEEEETTEEEEEEEEEETTEEEET-TEEESCHHHHH
T ss_pred             eeecCccHHHHHHHHhhCCCCCeEEEEec-CCCCCEEEEEEeCCCeEEEEEEeCCCEEEeC-CCccCCHHHHH
Confidence            99999999999999965 46899999998 458999 999999999999999887777776 56799999996

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.88  E-value=7.5e-23  Score=121.58  Aligned_cols=69  Identities=29%  Similarity=0.505  Sum_probs=61.9

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCe---EEEEEEEe-eC-------CeEEECCCCCcCC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESK---VEHYRVKY-KE-------AHLTIDDEEFFEN   66 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~---v~h~~I~~-~~-------~~~~~~~~~~F~s   66 (71)
                      ||||.|+|++||++|+.  .++|+||||+| +.+|.| ||++.++.   |+||+|.+ .+       +.|++. ...|+|
T Consensus        43 Wyhg~i~R~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~g~~~~~-~~~F~S  120 (308)
T 3qwy_A           43 FYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIA-NQSFPD  120 (308)
T ss_dssp             GEETTCCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEECCSSSSCEEEEEEEECCCCTTTTCCCCEEET-TEEESS
T ss_pred             cccCCCCHHHHHHHHhccCCCCceEEEEcc-CCCCCEEEEEEeCCCCCceEEEEEeeccCCCcCcccceEEEe-CeeeCC
Confidence            99999999999999964  57899999999 889999 99999988   99999987 42       678887 489999


Q ss_pred             hhHhC
Q psy12414         67 LAQLV   71 (71)
Q Consensus        67 l~~Lv   71 (71)
                      +.+||
T Consensus       121 l~eLv  125 (308)
T 3qwy_A          121 IPALL  125 (308)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.87  E-value=3.8e-22  Score=126.97  Aligned_cols=70  Identities=41%  Similarity=0.768  Sum_probs=63.6

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  +++|+||||+| +.+|.| ||++.++.|+||+|.+. +|.|++.+...|+||.+||
T Consensus       168 Wy~g~isr~~ae~~L~~~~~~~G~FLvR~s-~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv  241 (635)
T 4fl3_A          168 WFHGKISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV  241 (635)
T ss_dssp             TBCCSCCHHHHHHHHHSSSCCTTCEEEEES-SSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHH
T ss_pred             ceeccCCHHHHHHHHHcCCCCCceEEEEec-CCCCCEEEEEEECCEEEEEEEEECCCCCEEeCCCCccCCHHHHH
Confidence            99999999999999864  46999999999 678999 99999999999999876 5789998878999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.87  E-value=5.9e-22  Score=125.62  Aligned_cols=70  Identities=30%  Similarity=0.562  Sum_probs=63.9

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  +++|+||||.| +.++.| ||++.++.|+||+|.+. +|.|++.+...|+||.|||
T Consensus       163 wyhg~i~r~~ae~~L~~~~~~~G~FLvR~s-~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv  236 (613)
T 2ozo_A          163 WYHSSLTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLV  236 (613)
T ss_dssp             TBCTTCCHHHHHHHHSSSCCCTTCEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTCCEECTTSCEESSHHHHH
T ss_pred             ccccCCCHHHHHHHHhhcCCCCceEEEEec-CCCCCEEEEEEECCeEEEEEEEECCCCCEEECCCCCcCCHHHHH
Confidence            99999999999999974  58999999999 678999 99999999999999976 5789988778999999986

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.85  E-value=3e-23  Score=125.92  Aligned_cols=69  Identities=30%  Similarity=0.464  Sum_probs=0.0

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCC-eEEECCCCCcCChhHh
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA-HLTIDDEEFFENLAQL   70 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~-~~~~~~~~~F~sl~~L   70 (71)
                      ||||.|+|.+||.+|...++|+||||.| +.+|.| ||++.++.|+||+|.+.++ .|++.....|+||++|
T Consensus       303 WyhG~isR~~AE~LL~~~~~G~FLVR~S-s~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~SL~eL  373 (373)
T 3hhm_B          303 WNVGSSNRNKAENLLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL  373 (373)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             CcCCCCCHHHHHHHhccCCCCcEEEEec-CCCCCEEEEEEECCeEEEEEEEEcCCCcEEeCCCCCCCChhhC
Confidence            9999999999999998889999999999 889999 9999999999999998754 4555555899999987

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.85  E-value=3.2e-21  Score=120.84  Aligned_cols=71  Identities=42%  Similarity=0.725  Sum_probs=66.0

Q ss_pred             CcccCCCHHHHHHhhCCC-CCceEEEEecCCCCCce-EEEEeCC----------eEEEEEEEeeCCeEEECCCCCcCChh
Q psy12414          1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFES----------KVEHYRVKYKEAHLTIDDEEFFENLA   68 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~-~~G~fliR~s~~~~~~~-Ls~~~~~----------~v~h~~I~~~~~~~~~~~~~~F~sl~   68 (71)
                      ||||.++|++||.+|... ++|+||||.|++.+|.| ||++.++          .++||+|...++.|+++....|+||.
T Consensus       112 w~~g~~~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~~g~~~l~~~~~F~sL~  191 (525)
T 2shp_A          112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLT  191 (525)
T ss_dssp             TBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSHH
T ss_pred             eecccCCHHHHHHHHhccCCCceEEEEecCCCCCCEEEEEEECCccccccccccceEEEEEEecCCeEEECCCceeCcHH
Confidence            999999999999999754 88999999999999999 9999977          89999999988999998778999999


Q ss_pred             HhC
Q psy12414         69 QLV   71 (71)
Q Consensus        69 ~Lv   71 (71)
                      +||
T Consensus       192 eLV  194 (525)
T 2shp_A          192 DLV  194 (525)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.85  E-value=5.5e-22  Score=125.79  Aligned_cols=71  Identities=39%  Similarity=0.642  Sum_probs=65.4

Q ss_pred             CcccCCCHHHHHHhhC-CCCCceEEEEecCCCCCce-EEEEeCC---------eEEEEEEEeeCCeEEECCCCCcCChhH
Q psy12414          1 WFHGKISRETAESLLA-PKEDGLFLVRESTNFPQDF-MCVCFES---------KVEHYRVKYKEAHLTIDDEEFFENLAQ   69 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~-~~~~G~fliR~s~~~~~~~-Ls~~~~~---------~v~h~~I~~~~~~~~~~~~~~F~sl~~   69 (71)
                      ||||.|+|++||++|. ..++|+||||+|++.+|.| ||++..+         .|+||+|...+++|++.+...|+||.+
T Consensus       110 Wy~g~~~r~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~  189 (595)
T 3ps5_A          110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTD  189 (595)
T ss_dssp             TEEESCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBCGGGCBBSSSSCCBSSHHH
T ss_pred             cccccCCHHHHHHHHhccCCCceEEEEecCCCCCcEEEEEEECCccccccCCCceEEEEEEEeCCEEEEcCCcCCCCHHH
Confidence            9999999999999995 4578999999999999999 9999977         899999988788999988789999999


Q ss_pred             hC
Q psy12414         70 LV   71 (71)
Q Consensus        70 Lv   71 (71)
                      ||
T Consensus       190 LV  191 (595)
T 3ps5_A          190 LV  191 (595)
T ss_dssp             HH
T ss_pred             HH
Confidence            86

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.84  E-value=1.1e-20  Score=116.12  Aligned_cols=71  Identities=66%  Similarity=1.169  Sum_probs=66.6

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+..++|+||||.|++.+|.| ||++.++.++||+|...++.|++.....|.++.+||
T Consensus        82 wyhg~i~r~~ae~~L~~~~~G~FlvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~i~~~~~F~sl~eLv  153 (450)
T 1k9a_A           82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLV  153 (450)
T ss_dssp             TBCTTCCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHH
T ss_pred             ccccCcCHHHhhhhhccCCCceEEEEecCCCCCceEEEEEeCCeeeEEEEEecCCceEeccccccccHHHHH
Confidence            99999999999999987788999999999999999 999999999999998888999999889999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.84  E-value=6.8e-21  Score=118.20  Aligned_cols=71  Identities=41%  Similarity=0.731  Sum_probs=65.5

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+.+|+..++|+||||.|++.++.| ||++.++.++||+|.+. ++.+++.....|+++.+||
T Consensus       107 wyhg~i~r~~ae~ll~~~~~G~fLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~eLv  179 (495)
T 1opk_A          107 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELV  179 (495)
T ss_dssp             TEEEECCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHH
T ss_pred             hhccCCCHHHHHHHhhCCCCceEEEEeCCCCCCceEEEEeeCCeEEEEEEEecCCCceEeccCccchhHHHHh
Confidence            99999999999999987889999999999999999 99999999999999876 5678888778899999875

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.83  E-value=6.4e-21  Score=119.61  Aligned_cols=71  Identities=39%  Similarity=0.646  Sum_probs=64.9

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCC---------eEEEEEEEeeCCeEEECCCCCcCChhH
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFES---------KVEHYRVKYKEAHLTIDDEEFFENLAQ   69 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~---------~v~h~~I~~~~~~~~~~~~~~F~sl~~   69 (71)
                      ||||.|+|++||.+|.. .++|+||||.|++.+|.| ||++..+         .++||+|...++.|.++....|+||.+
T Consensus       110 w~~g~i~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~Lsv~~~~~~~~~~~~~~v~h~~I~~~~g~~~l~~~~~F~sl~e  189 (532)
T 2b3o_A          110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTD  189 (532)
T ss_dssp             TBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEEC----CCEEEEEEEEBCCTTSBBSSSSCCBSSHHH
T ss_pred             ccccccchHHHHHHHhcCCCCceEEEecCCCCCCceEEEEEecCccccccCCCceEEEEEEEcCCceeeCCCcccCcHHH
Confidence            99999999999999963 578999999999999999 9999876         899999998888899987789999999


Q ss_pred             hC
Q psy12414         70 LV   71 (71)
Q Consensus        70 Lv   71 (71)
                      ||
T Consensus       190 LV  191 (532)
T 2b3o_A          190 LV  191 (532)
T ss_dssp             HH
T ss_pred             HH
Confidence            86

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.82  E-value=4.3e-20  Score=113.50  Aligned_cols=71  Identities=35%  Similarity=0.603  Sum_probs=63.4

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|+.  +++|+||||.|++.+|.| |||+.     ++.++||+|.+. ++.|++.....|+||.+||
T Consensus        67 w~~g~~~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~Sl~~Li  146 (452)
T 1fmk_A           67 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV  146 (452)
T ss_dssp             TEEETCCHHHHHHHHTCTTSCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHH
T ss_pred             cccCCccHHHHHHHhccCCCCCceEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccCCHHHHH
Confidence            99999999999999975  477999999999999999 99997     568999999986 5678988778999999985

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.81  E-value=1.9e-19  Score=102.30  Aligned_cols=70  Identities=40%  Similarity=0.705  Sum_probs=63.3

Q ss_pred             CcccCCCHHHHHHhh-CCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L-~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+.+| ...++|+||||.|++.++.| ||++.++.++||+|.+. ++.|++. ...|+|+.+||
T Consensus        60 w~~g~isr~~ae~lL~~~~~~G~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~g~~~~~-~~~f~sl~eLv  132 (217)
T 1gri_A           60 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLW-VVKFNSLNELV  132 (217)
T ss_dssp             SBCTTCCHHHHHHHHHTCSSTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSSCEESS-SCEESSHHHHH
T ss_pred             hhcccCCHHHHHHHHhccCCCceEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEe-eeEcCCHHHHH
Confidence            999999999999999 56799999999999999999 99999999999999987 4677776 67899999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.80  E-value=9.2e-20  Score=114.04  Aligned_cols=71  Identities=35%  Similarity=0.603  Sum_probs=62.4

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.  +++|+||||.|+..+|.| |||+.     ++.++||+|.+. ++.|++.....|+||.+||
T Consensus       150 wy~g~i~r~~ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F~SL~eLv  229 (535)
T 2h8h_A          150 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV  229 (535)
T ss_dssp             TBCCSCCHHHHHHHHTCTTCCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEESSHHHHH
T ss_pred             eeccccCHHHHHHHhccCCCCCCeEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccccChHHhh
Confidence            99999999999999975  477999999999999999 99986     468999999885 5678888778899999985

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.80  E-value=2.1e-20  Score=112.53  Aligned_cols=67  Identities=28%  Similarity=0.591  Sum_probs=47.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+  ++|+||||+|++.+ .| ||++.++.++||+|.+.++.|.+. ...|+|+++||
T Consensus        15 wyhg~i~r~~a~~lL~--~~G~flvR~s~~~~-~~~lsv~~~~~~~h~~i~~~~~~~~~~-~~~F~sl~~LI   82 (377)
T 3cbl_A           15 WYHGAIPRAEVAELLV--HSGDFLVRESQGKQ-EYVLSVLWDGLPRHFIIQSLDNLYRLE-GEGFPSIPLLI   82 (377)
T ss_dssp             TBCTTCCHHHHHHHCC--STTEEEEEECC--C-CEEEEC-----CCEEEC----CCCCC-----CCSHHHHH
T ss_pred             ccCCCCCHHHHHHHHh--cCCCEEEEEeCCCC-cEEEEEEECCCccchhhccccceEEec-ceeccchHHHH
Confidence            9999999999999998  78999999998877 89 999999999999998877766654 57899999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.79  E-value=3.9e-19  Score=109.21  Aligned_cols=71  Identities=30%  Similarity=0.497  Sum_probs=63.2

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|.  ..++|+||||.|++.+|.| ||++.     ++.++||+|... ++.|++.....|+++.+||
T Consensus        72 W~~g~i~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLv  151 (454)
T 1qcf_A           72 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELV  151 (454)
T ss_dssp             TEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHH
T ss_pred             ccccccchhhhhhhhhcCCCCCceEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeCccccCCHHHHH
Confidence            9999999999999884  3689999999999999999 99997     678999999886 5688888778999999874

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=1.3e-19  Score=96.36  Aligned_cols=52  Identities=29%  Similarity=0.526  Sum_probs=47.9

Q ss_pred             CCceEEEEecCCCCCce-EEEEeC--CeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414         19 EDGLFLVRESTNFPQDF-MCVCFE--SKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus        19 ~~G~fliR~s~~~~~~~-Ls~~~~--~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      .+|+||||+|+ .++.| |||+.+  +.|+||+|.+.+++|++.+...|+||.|||
T Consensus        43 ~dG~FLVR~S~-~~g~y~LSv~~~~~~~vkH~rI~~~~~~~~i~~~~~F~sL~eLV   97 (126)
T 2cr4_A           43 QDGLYCIRNSS-TKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLFVSVGSMV   97 (126)
T ss_dssp             CTTCEEEEECS-STTCEEEEEEETTTTEECCEECEEETTEEESSSSCEESSHHHHH
T ss_pred             CCCeEEEEecC-CCCCEEEEEEeCCCCCEEEEEEEECCCeEEEcCCccCCCHHHHH
Confidence            35999999999 89999 999998  999999999888899998778999999996

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=99.58  E-value=4.8e-15  Score=82.56  Aligned_cols=67  Identities=18%  Similarity=0.403  Sum_probs=56.7

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEe-CCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCF-ESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~-~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      +|+ +++..+||++|... +|+||||+|+. ++.+ |+++. ++.++|+.|...+..|.+++ ..|.+|.|||
T Consensus        16 ~F~-n~s~~qAe~~L~~~-~G~~liRPSsk-~~~ltit~Kv~d~~~~Hi~I~E~~k~l~ig~-~~fedLDElI   84 (178)
T 2xp1_A           16 LFK-NFNVTESENYLRSS-TDDFLIRKGSR-HGYCVLVIKFASDVFVHMKIEEHSEHYTCSN-KHFEDIDEVI   84 (178)
T ss_dssp             TEE-CCCHHHHHHHHHHS-SCCEEEEECSS-TTEEEEEEEEETTEEEEEEEEECSSCEEETT-EEESSHHHHH
T ss_pred             CcC-CCCHHHHHHHHhcC-CCCEEEeecCC-CCcEEEEEEECCCcEEEEEEEECCCEEEECC-cEECCHHHHH
Confidence            355 79999999999875 49999999986 7788 99995 88999999987676787775 5899999986

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=99.24  E-value=1.8e-11  Score=76.16  Aligned_cols=52  Identities=23%  Similarity=0.425  Sum_probs=47.3

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeC---CeEEEEEEEee
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFE---SKVEHYRVKYK   52 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~---~~v~h~~I~~~   52 (71)
                      |++|.|++++|+++|.++++|+||||.|++.+|.+ ++....   +.++|+.|...
T Consensus       353 ~I~GFIsk~ea~~lL~~~~~GTFLLRFSeS~~GgitIsyV~~d~~~~~kh~~v~p~  408 (473)
T 1uur_A          353 IIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPN  408 (473)
T ss_dssp             SSCBSCCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGG
T ss_pred             cEEEEecHHHHHHHhhCCCCCeEEEEeccCCCceEEEEEEeecCCCceeEEEecCC
Confidence            78999999999999999999999999999999999 999873   68999988643

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=98.68  E-value=2.7e-08  Score=55.36  Aligned_cols=66  Identities=18%  Similarity=0.325  Sum_probs=50.0

Q ss_pred             CcccCCCHHHHHHhhCCCCCc--eEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDG--LFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G--~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||++  +++++|++|....++  .|.++.+...||.| |++. .+.++|-.|.-.+ +|.+ ....|+||.+||
T Consensus       103 kf~~--s~~~~e~~L~~~~p~~~~Y~f~~s~~~PG~f~l~~~-~~~~~~e~i~V~~-g~~~-~~~~f~sl~~L~  171 (178)
T 2xp1_A          103 KYFN--SPEDAEKLLSSFDGSKVVYAFYFSRKYPGKLTFAYN-NGSILEEYIGVSD-MLTY-NNSTFKDIDSFV  171 (178)
T ss_dssp             TBCS--CTTTSHHHHHTCCSSSCEEEEEECSSSTTEEEEEEE-SSSEEEEEEEESS-SEEE-TTEEESSHHHHH
T ss_pred             ccCC--CHHHHHHHHHHhCCCCceEEEEecCCCCCeEEEEEc-CCCCceeeEEEcc-CCEE-cCcCCcCHHHHH
Confidence            6887  788999999654333  39999999999999 9887 6677766665554 4555 468899999985

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=98.68  E-value=4.8e-08  Score=63.28  Aligned_cols=50  Identities=24%  Similarity=0.283  Sum_probs=40.6

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCC-CCCce-EEEEeC---C-eEEEEEEE
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTN-FPQDF-MCVCFE---S-KVEHYRVK   50 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~-~~~~~-Ls~~~~---~-~v~h~~I~   50 (71)
                      |..|.|++++|+++|++.++|+||+|.|++ ..|.+ ++....   + .+.++.|.
T Consensus       577 ~I~GFIsK~~a~~lL~~~~~GTFLLRFSdS~~~Ggitia~V~~~~~~~~~~v~~v~  632 (683)
T 1yvl_A          577 CIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVE  632 (683)
T ss_dssp             CCCBCCCHHHHHHHHSSSCSSCEEEEECSSCSSCEEEEEEEECCC---CCEEEEBC
T ss_pred             ceEEeecHHHHHHHHhCCCCCeEEEecCCCCCCCceEEEEEeccCCCccceEEecC
Confidence            457889999999999999999999999999 99998 888762   3 44455443

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=98.62  E-value=3.4e-08  Score=63.06  Aligned_cols=41  Identities=29%  Similarity=0.384  Sum_probs=37.4

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFE   41 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~   41 (71)
                      |.+|.|++++|+.+|.+.++|+||+|.|++..|.+ ++....
T Consensus       466 ~I~Gfisk~~a~~~L~~~~~GtFLlRFSds~~G~~tisyv~~  507 (585)
T 1y1u_A          466 AILGFVNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFD  507 (585)
T ss_dssp             CCCBSCCHHHHHHHHHTSCTTCEEEEEETTSTTEEEEEECCS
T ss_pred             ceEEeccHHHHHHHHhCCCCCceEEEeccCCcCcEEEEEEec
Confidence            45799999999999999999999999999999999 888773

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=98.48  E-value=1.4e-07  Score=60.06  Aligned_cols=40  Identities=28%  Similarity=0.316  Sum_probs=35.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCC-CCCce-EEEEe
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTN-FPQDF-MCVCF   40 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~-~~~~~-Ls~~~   40 (71)
                      |-.|.|++++|+.+|++.++|+||+|.|++ ..|.+ ++...
T Consensus       442 ~I~GFIsK~~a~~lL~~~~~GTFLLRFSdS~~~GgITia~V~  483 (575)
T 1bf5_A          442 CIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVE  483 (575)
T ss_dssp             CCCCCCCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECC
T ss_pred             ceEEeecHHHHHHHHhCCCCCeEEEecCCCCCCCcEEEEEEe
Confidence            446888999999999999999999999998 89998 87766

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=98.44  E-value=5.9e-07  Score=53.63  Aligned_cols=45  Identities=9%  Similarity=0.188  Sum_probs=38.9

Q ss_pred             cccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeC-CeEEE
Q psy12414          2 FHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFE-SKVEH   46 (71)
Q Consensus         2 ~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~-~~v~h   46 (71)
                      |.+.+|-+||.+.|+.  ..+|+|++|.|.+.+|.| +++... +.|.|
T Consensus       246 y~aFlTydEv~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~~~~I~q  294 (329)
T 3bux_B          246 YMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQ  294 (329)
T ss_dssp             BCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECTTSCEEE
T ss_pred             hhheeeHHHHHHHHHHhcCCCCcEEEEeccCccCceEEEEECCCCceee
Confidence            5679999999999987  799999999999999999 999884 44443

>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}

Probab=98.33  E-value=1.6e-06  Score=51.66  Aligned_cols=40  Identities=10%  Similarity=0.198  Sum_probs=36.9

Q ss_pred             cccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEeC
Q psy12414          2 FHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFE   41 (71)
Q Consensus         2 ~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~~   41 (71)
                      |.|.||-+||.+.|+  ...+|+|++|.|.+.+|.| ++....
T Consensus       231 y~aFlTydEV~~~L~~~~~KpGsYIfR~ScTrlGqwAIgYV~s  273 (323)
T 3op0_A          231 YMAFLTYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGYVSS  273 (323)
T ss_dssp             BCTTCCHHHHHHHTTGGGGSTTEEEEEECSSSTTCEEEEEECT
T ss_pred             eeeeeeHHHHHHHHHHhccCCCcEEEEeccCccCceEEEEEcC
Confidence            678999999999998  6799999999999999999 999873

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=98.31  E-value=9.7e-08  Score=61.05  Aligned_cols=50  Identities=24%  Similarity=0.313  Sum_probs=40.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCC-CCCce-EEEEeC---CeEEEEEEE
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTN-FPQDF-MCVCFE---SKVEHYRVK   50 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~-~~~~~-Ls~~~~---~~v~h~~I~   50 (71)
                      |-+|.|++++|+++|.+.++|+||+|.|++ ..|.+ ++.+..   +.+.|+.|.
T Consensus       458 ~I~Gfisk~~a~~lL~~~~~GTFLlRFSes~~~Ggitis~v~~~~~g~~~~~~v~  512 (596)
T 1bg1_A          458 YIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVE  512 (596)
T ss_dssp             CCCBCCCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCC
T ss_pred             CeEEEecHHHHHHHHhCCCCCeeEEeecCCCCCCcEEEEEEecCCCCceeEEecC
Confidence            457899999999999999999999999998 88998 877663   345555554

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=97.79  E-value=3e-06  Score=58.02  Aligned_cols=66  Identities=23%  Similarity=0.396  Sum_probs=0.0

Q ss_pred             CCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEe-CCeEEEEEEEee--CC------eEEECCCCCcCChhHhC
Q psy12414          5 KISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCF-ESKVEHYRVKYK--EA------HLTIDDEEFFENLAQLV   71 (71)
Q Consensus         5 ~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~-~~~v~h~~I~~~--~~------~~~~~~~~~F~sl~~Lv   71 (71)
                      +++-.+|++.|.+++.|.++||+|+.-+... ++++. ++...|+-|.-.  ++      .+.|+ +..|.+|.|||
T Consensus      1029 n~~~~qAe~~L~~~~~Gd~vIRPSSkG~dhLtvTwKv~d~vyqHidV~E~~K~n~~slG~~L~I~-~~~y~DLDEli 1104 (1219)
T 3psi_A         1029 PFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGKVLIVD-NQKYNDLDQII 1104 (1219)
T ss_dssp             -----------------------------------------------------------------------------
T ss_pred             CCCHHHHHHHHhcCCCCCEEEeecCCCCCceEEEEEEcCCcEEEEEEEecCCccccccCceEEEC-CceECCHHHHH
Confidence            6888999999999999999999997644444 66665 567788888642  22      35555 35899999986

>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=94.11  E-value=0.084  Score=26.85  Aligned_cols=27  Identities=22%  Similarity=0.267  Sum_probs=23.6

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.|+..+..+|.| |.|+.++
T Consensus        59 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g   86 (111)
T 2di8_A           59 EDLEDGTCKVSYFPTVPGVYIVSTKFAD   86 (111)
T ss_dssp             CBCTTSCEEEEECCCSCSEEEEEEEESS
T ss_pred             EECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence            45788999999999999999 9999854

>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0

Probab=93.71  E-value=0.061  Score=26.82  Aligned_cols=27  Identities=11%  Similarity=0.245  Sum_probs=22.4

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +++.+|+|.|+-....+|.| |.++.++
T Consensus        58 ~d~~dGty~V~Y~p~~~G~y~i~V~~~g   85 (100)
T 3rgh_A           58 QDHGDGTHTITYIPLCPGAYTVTIKYGG   85 (100)
T ss_dssp             EECSSSEEEEEEECCSSEEEEEEEEETT
T ss_pred             EeCCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            35678999999988888999 9988865

>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A

Probab=93.71  E-value=0.08  Score=26.01  Aligned_cols=27  Identities=26%  Similarity=0.370  Sum_probs=23.4

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.++-....+|.| |+|+.++
T Consensus        51 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g   78 (94)
T 2w0p_A           51 EDRKDGSCGVAYVVQEPGDYEVSVKFNE   78 (94)
T ss_dssp             EECTTSCEEEEEECSSCEEEEEEEEETT
T ss_pred             EECCCCEEEEEEEECCCceEEEEEEECC
Confidence            35688999999999899999 9999865

>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A

Probab=93.65  E-value=0.089  Score=25.96  Aligned_cols=27  Identities=22%  Similarity=0.396  Sum_probs=23.3

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.++..+..+|.| |.|+.++
T Consensus        54 ~d~~dGty~v~Y~p~~~G~y~i~V~~~g   81 (97)
T 2bp3_A           54 TDNQDGTCSVSYLPVLPGDYSILVKYNE   81 (97)
T ss_dssp             EECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred             EECCCCEEEEEEEeCCCCcEEEEEEECC
Confidence            35688999999999899999 9999865

>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.44  E-value=0.13  Score=26.26  Aligned_cols=27  Identities=22%  Similarity=0.420  Sum_probs=23.6

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.++-....+|.| |.++.++
T Consensus        69 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g   96 (115)
T 2eea_A           69 IDNKDGTCTVTYLPTLPGDYSILVKYND   96 (115)
T ss_dssp             BCCSSSEEEEEEECSSCSCEEEEEEESS
T ss_pred             EECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            46788999999999999999 9999854

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=93.38  E-value=0.014  Score=40.57  Aligned_cols=65  Identities=12%  Similarity=0.211  Sum_probs=0.0

Q ss_pred             CCHHHHHHhhCC----CCC-ceEEEEecCCCCCce-EEEEe--CCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          6 ISRETAESLLAP----KED-GLFLVRESTNFPQDF-MCVCF--ESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         6 i~r~~a~~~L~~----~~~-G~fliR~s~~~~~~~-Ls~~~--~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      -+++++++.|..    +|. -.|.+..+...||.| |++..  +..++|-.|.-...+|.+. ...|+++.+|+
T Consensus      1127 g~~~eve~~L~~~k~~nP~ri~Y~f~~~~~~PG~F~L~f~~~~~~~~~~~~v~v~p~Gf~~r-~~~f~~~~~L~ 1199 (1219)
T 3psi_A         1127 GTKKDVVKFIEDYSRVNPNKSVYYFSLNHDNPGWFYLMFKINANSKLYTWNVKLTNTGYFLV-NYNYPSVIQLC 1199 (1219)
T ss_dssp             --------------------------------------------------------------------------
T ss_pred             CCHHHHHHHHHHHHHhCCCcceEEEEeCCCCCCEEEEEEecCCCCCceeeeEEEccCeEEEc-CccCcCHHHHH
Confidence            357788888852    222 456677788889999 99886  3467887777677788877 57899998875

>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=93.36  E-value=0.077  Score=26.96  Aligned_cols=28  Identities=11%  Similarity=0.211  Sum_probs=23.8

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      .++.+|+|.|+.....+|.| |+|+.++.
T Consensus        61 ~d~~dGty~v~Y~p~~~G~y~i~V~~~g~   89 (113)
T 2dia_A           61 QNNKDGTYAVTYVPLTAGMYTLTMKYGGE   89 (113)
T ss_dssp             EECTTSEEEEEEECSSCEEEEEEEEETTE
T ss_pred             EECCCCEEEEEEEeCCCccEEEEEEECCE
Confidence            45688999999999889999 99998653

>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}

Probab=93.22  E-value=0.12  Score=26.48  Aligned_cols=27  Identities=22%  Similarity=0.375  Sum_probs=23.7

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.++-....+|.| |.++.++
T Consensus        66 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g   93 (119)
T 2k9u_A           66 EDRKDGSCGVSYVVQEPGDYEVSIKFND   93 (119)
T ss_dssp             ECCSSSEEEEEEECCSSEEEEEEEEETS
T ss_pred             EECCCCEEEEEEEECCCceEEEEEEECC
Confidence            46789999999999999999 9999864

>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A

Probab=93.17  E-value=0.086  Score=25.93  Aligned_cols=27  Identities=11%  Similarity=0.176  Sum_probs=22.5

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +++.+|+|.++-....+|.| |.++.++
T Consensus        56 ~d~~dGty~v~Y~p~~~G~y~i~V~~~g   83 (96)
T 1v05_A           56 KHMGNRVYNVTYTVKEKGDYILIVKWGD   83 (96)
T ss_dssp             EECSTTEEEEEEECSSCEEEEEEEEETT
T ss_pred             EeCCCCEEEEEEEeCCCEEEEEEEEECC
Confidence            34678999999988889999 9998865

>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=93.03  E-value=0.12  Score=25.91  Aligned_cols=27  Identities=15%  Similarity=0.263  Sum_probs=23.4

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.|+.....+|.| |.++.++
T Consensus        59 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g   86 (105)
T 2dic_A           59 RDNKDGSCSAEYIPFAPGDYDVNITYGG   86 (105)
T ss_dssp             EECSSSCEEEEECCSSCEEEEEEEEETT
T ss_pred             EECCCCeEEEEEEeCCCeEEEEEEEECC
Confidence            35688999999999889999 9999865

>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.79  E-value=0.15  Score=25.58  Aligned_cols=27  Identities=19%  Similarity=0.514  Sum_probs=22.9

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .+..+|+|.|+.....+|.| |+|+.++
T Consensus        70 ~D~~dGty~v~y~p~~~G~y~i~V~~~g   97 (113)
T 2ds4_A           70 QDNKDGTYYISYTPKEPGVYTVWVCIKE   97 (113)
T ss_dssp             ECCSSSEEEEEEECSSSEEEEEEEEESS
T ss_pred             EECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence            45688999999998889999 9998854

>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.66  E-value=0.069  Score=26.82  Aligned_cols=28  Identities=14%  Similarity=0.296  Sum_probs=23.5

Q ss_pred             hCCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         15 LAPKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        15 L~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +.++.+|+|.|+.....+|.| |.|+.++
T Consensus        58 v~d~~dGty~v~Y~p~~~G~y~I~V~~~g   86 (105)
T 2ee6_A           58 FDDHKNGSCGVSYIAQEPGNYEVSIKFND   86 (105)
T ss_dssp             ECCCCSSCCCEEEEESSCEEEEEEEEETT
T ss_pred             EEECCCCEEEEEEEECCCceEEEEEEECC
Confidence            346788999999888889999 9998865

>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=92.29  E-value=0.1  Score=26.51  Aligned_cols=27  Identities=26%  Similarity=0.429  Sum_probs=23.5

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.|+.....+|.| |.|+.++
T Consensus        59 ~d~~dGty~V~Y~p~~~G~y~I~V~~~g   86 (111)
T 2d7o_A           59 KDNKDGTCTVSYLPTAPGDYSIIVRFDD   86 (111)
T ss_dssp             CCCSSSEEEEEECCSSCEEEEEECBBSS
T ss_pred             EECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence            46788999999999999999 9998854

>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=92.17  E-value=0.1  Score=27.13  Aligned_cols=26  Identities=23%  Similarity=0.414  Sum_probs=22.8

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+|+|.|+.....+|.| |.|+.++
T Consensus        63 d~~dGty~V~Y~p~~~G~y~I~V~~~g   89 (124)
T 2dmb_A           63 ENEDGTYDIFYTAAKPGTYVIYVRFGG   89 (124)
T ss_dssp             ECTTSCEEEEEECSSCEEEEEEEEESS
T ss_pred             eCCCCEEEEEEEcCCCEEEEEEEEECC
Confidence            4688999999999999999 9999864

>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=92.03  E-value=0.12  Score=25.99  Aligned_cols=26  Identities=15%  Similarity=0.247  Sum_probs=22.1

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+|+|.++.....+|.| |.|+.++
T Consensus        63 d~~dGty~v~Y~p~~~G~y~i~V~~~g   89 (108)
T 2dj4_A           63 DNGDGTHTVTYTPSQEGPYMVSVKYAD   89 (108)
T ss_dssp             ECSSSEEEEEECCSSCEEEEEEEEESS
T ss_pred             ECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            4688999999998889999 9998854

>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.57  E-value=0.16  Score=26.53  Aligned_cols=26  Identities=23%  Similarity=0.409  Sum_probs=21.3

Q ss_pred             CCCCceEEEEe-cCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRE-STNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~-s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+|+|+||- ....++.| +.|..++
T Consensus        79 Dn~DGsy~v~Yr~~~~~g~~~I~V~~~~  106 (124)
T 2di7_A           79 DRKDGSFIVRYRMYASYKNLKVEIKFQG  106 (124)
T ss_dssp             CCSSSCCEEECCCCSCCSCCEEEEESSS
T ss_pred             ECCCCeEEEEEECCCCCCCEEEEEEECC
Confidence            67999999998 55667889 9888754

>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}

Probab=91.57  E-value=0.28  Score=23.66  Aligned_cols=26  Identities=12%  Similarity=0.111  Sum_probs=21.4

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+|+|.++-....+|.| |+++.++
T Consensus        50 d~~dGty~v~Y~p~~~G~y~i~V~~~g   76 (89)
T 3cnk_A           50 HVGSRLYSVSYLLKDKGEYTLVVKWGH   76 (89)
T ss_dssp             EEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred             ECCCCEEEEEEEECCCccEEEEEEECC
Confidence            4577899999888888888 8888865

>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=91.51  E-value=0.24  Score=25.82  Aligned_cols=27  Identities=22%  Similarity=0.369  Sum_probs=23.2

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.++-....+|.| |.++.++
T Consensus        79 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g  106 (131)
T 2di9_A           79 SDNGDGTCSVSYLPTKPGEYFVNILFEE  106 (131)
T ss_dssp             EECSSSEEEEEEECSSSSEEEEEEEESS
T ss_pred             EECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            35688999999999999999 9999854

>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.42  E-value=0.11  Score=26.60  Aligned_cols=26  Identities=15%  Similarity=0.321  Sum_probs=22.3

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+|+|.|+.....+|.| |.|+.++
T Consensus        74 d~~dGty~v~Y~p~~~G~y~i~V~~~g  100 (119)
T 2e9j_A           74 DNKDGTYAVTYIPDKTGRYMIGVTYGG  100 (119)
T ss_dssp             ECCSSEEEEEECCCSCSEEEECCEESS
T ss_pred             ECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence            4678999999998889999 9998864

>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=91.22  E-value=0.16  Score=25.82  Aligned_cols=26  Identities=12%  Similarity=0.342  Sum_probs=22.5

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+|+|.++.....+|.| |+|+.++
T Consensus        64 d~~dGty~v~Y~p~~~G~y~i~V~~~g   90 (115)
T 2d7m_A           64 DNGDGTYTVSYLPDMSGRYTITIKYGG   90 (115)
T ss_dssp             ECSSSCEEEEECCCSCEEEEEEEEESS
T ss_pred             ECCCCEEEEEEEeCCCceEEEEEEECC
Confidence            4678999999999889999 9999864

>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=90.65  E-value=0.18  Score=24.92  Aligned_cols=28  Identities=18%  Similarity=0.272  Sum_probs=23.6

Q ss_pred             hCCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         15 LAPKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        15 L~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +.++.+|+|-|...+...|.| |+++.++
T Consensus        40 v~d~~dGtY~v~ytP~e~G~h~v~V~~~g   68 (93)
T 2d7n_A           40 ITDNKDGTITVRYAPTEKGLHQMGIKYDG   68 (93)
T ss_dssp             EEECSSSCEEEEECCSSCEEEEEEEEESS
T ss_pred             EEECCCCEEEEEEEccCCEEEEEEEEECC
Confidence            345688999999999999999 9999854

>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=90.03  E-value=0.19  Score=25.94  Aligned_cols=26  Identities=15%  Similarity=0.174  Sum_probs=22.5

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+|+|.++.....+|.| |.++.++
T Consensus        77 d~~dGty~v~Y~p~~~G~~~i~V~~~g  103 (128)
T 2dib_A           77 DNADGTYQVEYTPFEKGLHVVEVTYDD  103 (128)
T ss_dssp             ECSSSEEEEEECCSSCSEEEEEEBSSS
T ss_pred             ECCCCEEEEEEEeCCCEeEEEEEEECC
Confidence            4678999999999999999 9998864

>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A

Probab=89.72  E-value=0.45  Score=24.19  Aligned_cols=28  Identities=11%  Similarity=0.037  Sum_probs=23.1

Q ss_pred             hCCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         15 LAPKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        15 L~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +++..+|+|.|+..+...|.| ++|+.++
T Consensus        59 v~d~~~gty~v~ytP~~~G~h~v~V~~~g   87 (112)
T 2d7p_A           59 VSELDSDKHTIRFIPHENGVHSIDVKFNG   87 (112)
T ss_dssp             ECSCBTTEEEEEECCSSCEEEEEEEEESS
T ss_pred             EEeCCCCeEEEEEEcCCCEeEEEEEEECC
Confidence            345678999999999999999 9998854

>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.69  E-value=0.23  Score=24.75  Aligned_cols=27  Identities=19%  Similarity=0.166  Sum_probs=23.0

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|-|+..+..+|.| |+++.++
T Consensus        49 ~d~~dGtY~v~ytP~e~G~h~v~V~~~G   76 (95)
T 2ee9_A           49 VDNKDGTVTVRYAPTEVGLHEMHIKYMG   76 (95)
T ss_dssp             EECSSSCEEEECCCCSSEEEEEEEEESS
T ss_pred             EeCCCCeEEEEEEecCCEeEEEEEEECC
Confidence            35688999999999999999 9999854

>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=89.10  E-value=0.32  Score=24.41  Aligned_cols=27  Identities=15%  Similarity=0.059  Sum_probs=22.9

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++..+|+|-|...+..+|.| |+++.++
T Consensus        50 ~d~~dGty~v~ytP~e~G~h~v~V~~~g   77 (102)
T 2dlg_A           50 VPMGKNSHCVRFVPQEMGVHTVSVKYRG   77 (102)
T ss_dssp             EECSSSEEEEEBCCCTTCEEEEEEESSS
T ss_pred             EECCCCEEEEEEEecCCEeEEEEEEECC
Confidence            34678999999999999999 9999854

>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}

Probab=87.08  E-value=0.76  Score=25.32  Aligned_cols=28  Identities=21%  Similarity=0.400  Sum_probs=23.3

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      .++.+|+|.++.....+|.| ++++.+++
T Consensus       145 ~d~~dGty~v~Y~p~~~G~y~i~V~~~g~  173 (188)
T 2k7p_A          145 TDNQDGTCSVSYLPVLPGDYSILVKYNEQ  173 (188)
T ss_dssp             EECTTSEEEEEEECCSSEEEEEEEEETTE
T ss_pred             EECCCCEEEEEEEeCCCEEEEEEEEECCE
Confidence            35688999999998889999 99988653

>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.59  E-value=1.1  Score=23.15  Aligned_cols=25  Identities=16%  Similarity=0.392  Sum_probs=21.8

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ++.+| |.|+.....+|.| |.++.++
T Consensus        70 d~~dG-y~V~Y~P~~~G~y~I~V~~~g   95 (125)
T 2eec_A           70 ETPEG-YKVMYTPMAPGNYLISVKYGG   95 (125)
T ss_dssp             ECSSS-EEEEECCSSCEEEEEEEEESS
T ss_pred             ECCCC-EEEEEEcCCCeEEEEEEEECC
Confidence            45789 9999999999999 9999866

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=85.28  E-value=0.17  Score=24.51  Aligned_cols=15  Identities=27%  Similarity=0.262  Sum_probs=0.0

Q ss_pred             cccCCCHHHHHHhhC
Q psy12414          2 FHGKISRETAESLLA   16 (71)
Q Consensus         2 ~~g~i~r~~a~~~L~   16 (71)
                      |+|.|+|.+|+.+|.
T Consensus        67 ~~~~~~r~~ae~lL~   81 (90)
T 3reb_B           67 GGGRHRRRQAERMSQ   81 (90)
T ss_dssp             ---------------
T ss_pred             cccCcCHHHHHHHHh
Confidence            789999999999985

>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}

Probab=85.07  E-value=0.91  Score=24.95  Aligned_cols=26  Identities=23%  Similarity=0.354  Sum_probs=22.2

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +..+|+|.++.....+|.| |+++.++
T Consensus       146 d~~dGty~v~Y~p~~~G~y~i~V~~~g  172 (191)
T 2k7q_A          146 DLEDGTCRVTYCPTEPGNYIINIKFAD  172 (191)
T ss_dssp             ECTTSCEEEEEEESSCEEEEEEEEETT
T ss_pred             ECCCCEEEEEEEeCCCceEEEEEEECC
Confidence            4678999999988889999 9998865

>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A

Probab=84.11  E-value=0.9  Score=26.56  Aligned_cols=27  Identities=26%  Similarity=0.370  Sum_probs=22.8

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .+..+|+|.|+-....+|.| +.++.++
T Consensus       245 ~d~~dGt~~v~y~p~~~G~y~i~V~~~~  272 (288)
T 2j3s_A          245 EDRKDGSCGVAYVVQEPGDYEVSVKFNE  272 (288)
T ss_dssp             EECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred             EECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence            35688999999888889999 9998865

>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10

Probab=82.25  E-value=1.7  Score=24.13  Aligned_cols=27  Identities=15%  Similarity=0.283  Sum_probs=23.3

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      +..+|+|.++.....+|.| |.++.++.
T Consensus        64 d~~dGty~v~y~p~~~G~~~i~V~~~g~   91 (212)
T 1qfh_A           64 DNNDGTYGVVYDAPVEGNYNVNVTLRGN   91 (212)
T ss_dssp             ECSSSEEEEEECCCSSEEEEEEEEETTE
T ss_pred             ECCCcEEEEEEECcCcEEEEEEEEECCE
Confidence            4688999999999999999 99998653

>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=81.67  E-value=0.43  Score=24.44  Aligned_cols=26  Identities=0%  Similarity=-0.160  Sum_probs=20.9

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ...+|+|-|...+...|.+ ++|+.++
T Consensus        65 ~~~~g~y~v~ftP~e~G~h~v~V~~~g   91 (116)
T 2dmc_A           65 RLPNNHIGISFIPREVGEHLVSIKKNG   91 (116)
T ss_dssp             EETTTEEEEEECCCSCEEEEEECBBSS
T ss_pred             eCCCCeEEEEEEeCCCeeEEEEEEECC
Confidence            3467889999888888888 8888754

>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*

Probab=80.52  E-value=4.1  Score=25.30  Aligned_cols=39  Identities=10%  Similarity=0.193  Sum_probs=32.2

Q ss_pred             cccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe
Q psy12414          2 FHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF   40 (71)
Q Consensus         2 ~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~   40 (71)
                      |.+.++-+++++.|+.  ...|+|+.|.+.+..|.+ |.+..
T Consensus       222 ~~af~ty~ev~~~Lk~~~~~~GsYIfRls~trlGq~~LG~v~  263 (389)
T 2y1n_A          222 YMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVT  263 (389)
T ss_dssp             BCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEEC
T ss_pred             hhhcccHHHHHHHHHHhhccCCceEeccCcchHhHHHHHHHH
Confidence            4557889999998984  488999999998888888 87665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	71
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	1e-21
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	2e-20
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	6e-19
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	9e-19
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	2e-18
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	4e-18
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	1e-17
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	3e-17
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	3e-17
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	7e-17
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	8e-17
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	1e-16
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	2e-16
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	2e-16
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	3e-16
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	4e-16
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	7e-16
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	8e-16
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	1e-15
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	2e-15
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	2e-15
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	2e-15
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	3e-15
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	3e-15
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	4e-15
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	1e-14
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	3e-14
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	3e-14
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	5e-14
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	5e-14
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	1e-13
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	1e-13
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	4e-13
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	6e-12

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 1e-21
 Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKIS + A   L P EDGLFLVRES   P D+ +CV F   V HYRV +++ HLTID
Sbjct: 6  WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 65

Query: 60 DEEFFENLAQLV 71
          +  FF NL  +V
Sbjct: 66 EAVFFCNLMDMV 77

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 2e-20
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV  E KVEHYR+ Y  + L+ID
Sbjct: 6  WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 65

Query: 60 DEEFFENLAQLV 71
          +E +FENL QLV
Sbjct: 66 EEVYFENLMQLV 77

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.5 bits (175), Expect = 6e-19
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFH  +SR  AE+LL  K+ G F++R S + P DF + V  E  V+H++V          
Sbjct: 8  WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFL 67

Query: 60 DEEFFENLAQLV 71
            E F +L +LV
Sbjct: 68 WTEKFPSLNKLV 79

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (173), Expect = 9e-19
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WF GKI R  AE +L+  + DG FL+RES + P DF + V F + V+H++V    A    
Sbjct: 5  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 64

Query: 59 DDEEFFENLAQLV 71
               F +L +LV
Sbjct: 65 LWVVKFNSLNELV 77

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.0 bits (171), Expect = 2e-18
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHL 56
          WFHG +SR  A  L+    P+  GLF++R+S   P +  +   F+ K +H R+       
Sbjct: 7  WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQ 66

Query: 57 TIDDEEFFENLAQLV 71
                +F+++  ++
Sbjct: 67 CHVQHLWFQSVFDML 81

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.7 bits (170), Expect = 4e-18
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES-TNFPQDFMCVC-FESKVEHYRVKYKEAHLTI 58
          W+ G ISRE     L    DG FLVR++ T    D+          +  ++ +++     
Sbjct: 13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGF 72

Query: 59 DDEEFFENLAQLV 71
           D   F ++ +L+
Sbjct: 73 SDPLTFNSVVELI 85

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 1e-17
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          WFH  I+   AE+LL  +  DG FL R S + P D  + V     V H +++    +  +
Sbjct: 5  WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDL 64

Query: 59 DDEEFFENLAQLV 71
             E F  LA+LV
Sbjct: 65 YGGEKFATLAELV 77

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 3e-17
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 1   WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
            FHG ISRE A+ LL    +G +++RES   P  + + + F ++  +YR+ +   H    
Sbjct: 37  EFHGIISREQADELLG-GVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFV-- 93

Query: 60  DEEFFENLAQLV 71
            E+ FE++  LV
Sbjct: 94  GEKRFESIHDLV 105

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 3e-17
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHL 56
          +F+G ISR  AE  L  A   DGLFL+R+       + + +  + +  H+ ++ +     
Sbjct: 8  FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 67

Query: 57 TIDDEEFFENLAQLV 71
           I   +     A+L 
Sbjct: 68 AIAGGKAHCGPAELC 82

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.2 bits (161), Expect = 7e-17
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHLTI 58
          W+HG +SR  AE LL+   +G FLVRES + P    + + +E +V HYR+    +  L +
Sbjct: 7  WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 66

Query: 59 DDEEFFENLAQLV 71
            E  F  LA+LV
Sbjct: 67 SSESRFNTLAELV 79

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 8e-17
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
          +F G I+RE AE  L      DGL+L+R+S N+   F + V    K  HY ++       
Sbjct: 7  FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 66

Query: 57 TIDDEEFFENLAQLV 71
           I       + A L 
Sbjct: 67 AIAGGRTHASPADLC 81

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 1e-16
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          WFHGK+SR  AE+LL  + +G FLVREST  P  + +      + +H  +   E  +   
Sbjct: 9  WFHGKLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 66

Query: 60 DEEFFENLAQLV 71
          D   FE+++ L+
Sbjct: 67 DHR-FESVSHLI 77

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.4 bits (159), Expect = 2e-16
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
          ++HG +++   E+LL     DG FL+R+S + P    +CV F+  V  YR+       Y+
Sbjct: 5  YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYR 64

Query: 53 EAHLTIDDEEFFENLAQLV 71
                     F NL +LV
Sbjct: 65 IETDAHTPRTIFPNLQELV 83

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 2e-16
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-- 55
          WFHG+ISRE +  ++      DGLFL+R+S + P+ F + +C   K++++++   E    
Sbjct: 7  WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66

Query: 56 --LTIDD-EEFFENLAQLV 71
             ++DD    F +L QLV
Sbjct: 67 TFFSLDDGNTKFSDLIQLV 85

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 3e-16
 Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
          W+ G ++   A+  L    +G FL+R+S++      + V   +   + R++Y++    +D
Sbjct: 17 WYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLD 76

Query: 60 -------DEEFFENLAQLV 71
                   + F+++  L+
Sbjct: 77 SIICVKSKLKQFDSVVHLI 95

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 4e-16
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 18/89 (20%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE------ 53
          W+ G++SR+ A +LL  +  G+FLVR+S+  P D+ + V   S+V HY +          
Sbjct: 2  WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 61

Query: 54 -----------AHLTIDDEEFFENLAQLV 71
                            ++ F++L  L+
Sbjct: 62 PSPAQPPPGVSPSRLRIGDQEFDSLPALL 90

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (155), Expect = 7e-16
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA--- 54
          WFHG+ISRE ++ L+      DGLFLVRES   PQ F + +C   KV+HY +   E    
Sbjct: 12 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 71

Query: 55 -HLTIDDEE-FFENLAQLV 71
           + ++DD +  F +L QLV
Sbjct: 72 LYFSMDDGQTRFTDLLQLV 90

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 8e-16
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 12/83 (14%)

Query: 1  WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDFMCVCF-----------ESKVEHYR 48
          WFHG +S + AE LL  K + G FLVRES + P DF+               +SKV H  
Sbjct: 2  WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVM 61

Query: 49 VKYKEAHLTIDDEEFFENLAQLV 71
          ++ +E    +   E F++L  LV
Sbjct: 62 IRCQELKYDVGGGERFDSLTDLV 84

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.5 bits (154), Expect = 1e-15
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKE-AHLTID 59
          W  G  +R  AE+LL  K DG FLVRES+        V  + +V+H  +      +   +
Sbjct: 11 WNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAE 70

Query: 60 DEEFFENLAQLV 71
              + +L +LV
Sbjct: 71 PYNLYSSLKELV 82

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 2e-15
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 1   WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKY-KEAHLT 57
           W+H  ++RE AE  L    + DG FL+R         + + +   V HY +   K     
Sbjct: 31  WYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYC 90

Query: 58  IDDEEFFENLAQLV 71
           I +   F+ L QLV
Sbjct: 91  IPEGTKFDTLWQLV 104

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.7 bits (152), Expect = 2e-15
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTID 59
          W+H  ++R  AE +L     DG FLVR+        +    E K++H RV  +E    + 
Sbjct: 11 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRV-QQEGQTVML 69

Query: 60 DEEFFENLAQLV 71
              F++L  L+
Sbjct: 70 GNSEFDSLVDLI 81

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 63.1 bits (153), Expect = 2e-15
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFES---KVEHYRVKYKEAHL 56
            +G + R+     L  ++ G F++R S   P  F +         +++HY V+  +   
Sbjct: 11 IIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAA 70

Query: 57 TIDD-EEFFENLAQLV 71
                +F    +Q V
Sbjct: 71 AKKTFPDFLSEHSQFV 86

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 3e-15
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEA--HLTI 58
          WFHG ISRE AE+LL  +  G FL+R S +     +    +S   H+ VK  +    +  
Sbjct: 11 WFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIP 70

Query: 59 DDEEFFENLAQLV 71
           ++    +L  LV
Sbjct: 71 GEKVAHTSLDALV 83

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 3e-15
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
           + G + +  AE+LL  K +G FL+R+S      F +     S+  H R++    + + D
Sbjct: 13 CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFD 72

Query: 60 DEEF----FENLAQLV 71
            +       ++  L+
Sbjct: 73 AHDPCVFHSPDITGLL 88

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 4e-15
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
           +HGKISRET E LL     DG +L+R+S + P  + +CV +   +  YRV       + 
Sbjct: 6  VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWS 65

Query: 53 EAHLTIDDEEFFENLAQLV 71
                  + +F  +  L+
Sbjct: 66 AETAPGVHKRYFRKIKNLI 84

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 1e-14
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 1   WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKY-KEAHLT 57
           WFHGKISRE +E ++    K +G FL+R   N     +C+  E KV HYR+   K   L+
Sbjct: 31  WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLS 90

Query: 58  IDDEEFFENLAQLV 71
           I + + F+ L QLV
Sbjct: 91  IPEGKKFDTLWQLV 104

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 3e-14
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 1  WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHL 56
          WF G ISR  A   L       G FL+R S     D+ + V     V HY++ +     L
Sbjct: 4  WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRL 63

Query: 57 TIDDEEFFENLAQLV 71
           +++   F +L +LV
Sbjct: 64 HLNEAVSFLSLPELV 78

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.7 bits (144), Expect = 3e-14
 Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 1  WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDFMCVC-----FESKVEHYR-VKYK 52
          WF   ISR+ AE  L     + G FL+RES +    F             V+HY+     
Sbjct: 14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73

Query: 53 EAHLTIDDEEFFENLAQLV 71
               I     F  L  LV
Sbjct: 74 NGGYYISPRITFPTLQALV 92

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 5e-14
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 9/80 (11%)

Query: 1  WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDFMCVCF------ESKVEHYRVKYK 52
          WF   ISR+ AE  L       G F++R+S      +              V+HY+++  
Sbjct: 3  WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 62

Query: 53 EA-HLTIDDEEFFENLAQLV 71
          +     I     F  L +LV
Sbjct: 63 DNGGFYISPRSTFSTLQELV 82

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 5e-14
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 1  WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF------MCVCFESKVEHYRVKYK 52
          WF   +SR+ AE  L       G FL+RES +    F              V+HY+++  
Sbjct: 6  WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65

Query: 53 EA-HLTIDDEEFFENLAQLV 71
          +     I     F  L +LV
Sbjct: 66 DNGGFYISPRITFPGLHELV 85

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 1e-13
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 1  WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDFMCVCF------ESKVEHYRVKYK 52
          W+ GK+ R+ AE  L       G FL+RES      +              V+HY+++  
Sbjct: 8  WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 67

Query: 53 EA-HLTIDDEEFFENLAQLV 71
          +     I     FE L QLV
Sbjct: 68 DNGGYYITTRAQFETLQQLV 87

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 1e-13
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 1  WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF------MCVCFESKVEHYRV-KY 51
          W+ GKI+R  +E LL       G FLVRES      +              V+HY++ K 
Sbjct: 7  WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 66

Query: 52 KEAHLTIDDEEFFENLAQLV 71
                I     F +L QLV
Sbjct: 67 DSGGFYITSRTQFNSLQQLV 86

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.0 bits (137), Expect = 4e-13
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 1  WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDFMCVCFESKV------EHYRVKYKE 53
          W++  ISR+ AE LL    ++G F+VR+S       + V  ++ +      +HY +K   
Sbjct: 8  WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 67

Query: 54 A---HLTIDDEEFFENLAQLV 71
                 + ++  F+++  L+
Sbjct: 68 DSPKRYYVAEKYVFDSIPLLI 88

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.5 bits (131), Expect = 6e-12
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 1  WFHGKISRETAESLLAPKEDGLFLVRES-TNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
          +  G IS+E   ++L+ K  G FL+R S ++           +      +++  E +   
Sbjct: 9  YIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPYTKQ 68

Query: 59 DDEEFFENLAQLV 71
                 + A+++
Sbjct: 69 QLN--NMSFAEII 79

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	71
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.97
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.96
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.96
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.96
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.96
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.95
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.95
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.95
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.95
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.95
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.95
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.95
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.95
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.95
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.94
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.94
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.94
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.94
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.94
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.94
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.94
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.94
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.94
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.93
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.93
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.93
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.93
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.93
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.92
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.92
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.92
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	99.81
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	99.69
d1bf5a3	142	STAT-1 {Human (Homo sapiens) [TaxId: 9606]}	98.81
d3buxb3	88	Cbl {Human (Homo sapiens) [TaxId: 9606]}	96.72
d1wlha1	101	F-actin cross-linking gelation factor (ABP-120) re	92.75
d2w0pa1	92	Filamin a {Human (Homo sapiens) [TaxId: 9606]}	91.66
d2diaa1	100	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	91.44
d2di8a1	98	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	91.38
d2dj4a1	101	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	91.09
d2d7ma1	102	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	90.58
d2d7na1	80	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	90.41
d1qfha1	104	F-actin cross-linking gelation factor (ABP-120) re	89.95
d2dica1	98	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	89.89
d1v05a_	96	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	89.71
d2d7pa1	99	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	89.38
d2diba1	115	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	88.44
d2bp3a1	92	Filamin a {Human (Homo sapiens) [TaxId: 9606]}	88.08
d2di9a1	118	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	87.89
d1qfha2	108	F-actin cross-linking gelation factor (ABP-120) re	86.47
d2j3sa2	88	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	84.43
d2dmba1	111	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	81.46
d2dmca1	103	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	80.97

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-30  Score=132.04  Aligned_cols=71  Identities=56%  Similarity=0.987  Sum_probs=67.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|++.+|.| |||+.++.++||+|...+++|++.+...|+||.+||
T Consensus         6 Wy~g~isR~eAe~~L~~~~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LI   77 (97)
T d1jwoa_           6 WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMV   77 (97)
T ss_dssp             TEEESCCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEESSSEESSTTSCCBSCHHHHH
T ss_pred             ccCCCCCHHHHHHHhcCCCCCeEEEEecCCCCccEEEEEEecCceEEEEEEEcCCcEEecCCcccCCHHHHH
Confidence            99999999999999998899999999999999999 999999999999998888899998889999999986

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-30  Score=131.69  Aligned_cols=71  Identities=66%  Similarity=1.169  Sum_probs=67.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|++.++.| ||++.+++++||+|..++++|++.+...|+||.+||
T Consensus         6 Wy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV   77 (101)
T d1k9aa2           6 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLV   77 (101)
T ss_dssp             TBCTTCCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHcCCCCCCEEEeccCCCCCCEEEEEEeCCccEEEEEEEcCCCceecCCcccCCHHHHH
Confidence            99999999999999998899999999999999999 999999999999999999999998888999999986

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.2e-29  Score=128.74  Aligned_cols=71  Identities=38%  Similarity=0.601  Sum_probs=64.0

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|.+.++|+||||.|++.+|.| ||++.++.++||+|.++++++++.+...|+||.+||
T Consensus         8 Wy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV   79 (97)
T d1r1qa_           8 WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLV   79 (97)
T ss_dssp             TBCTTCCHHHHHHHHHTSCTTCEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhcCCCCCEEEeecCCCCCCEEEEEEecCCeEEEEEEEcCCCeEEeCCCCcCCHHHHH
Confidence            99999999999999988899999999999999999 999999999999999986544444467899999986

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.9e-29  Score=128.07  Aligned_cols=71  Identities=41%  Similarity=0.720  Sum_probs=66.2

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||.+|++.++|+||||.|++.++.| ||++.++.++||+|.+.. +.|++.+...|+||.+||
T Consensus         7 Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI   79 (101)
T d1opka2           7 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELV   79 (101)
T ss_dssp             TEEEECCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHhcCCCCCeEEEEecCCCCCCEEEEEEcCcceEEEEeEECCCCCEEeCCCcccCCHHHHH
Confidence            99999999999999998899999999999999999 999999999999998874 678888778899999986

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.1e-29  Score=126.20  Aligned_cols=71  Identities=41%  Similarity=0.663  Sum_probs=62.7

Q ss_pred             CcccCCCHHHHHHhhC-CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA-PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~-~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|. +.++|+||||.|++.++.| ||++.++.++||+|.+++++++..+...|+||.+||
T Consensus         5 Wy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV   77 (96)
T d1jyra_           5 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELV   77 (96)
T ss_dssp             TBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCceEEEEEEECCCCeEEeCCccCCCHHHHH
Confidence            9999999999999994 5689999999999999999 999999999999999886543444467899999986

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3e-29  Score=129.53  Aligned_cols=71  Identities=35%  Similarity=0.533  Sum_probs=66.0

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.+ +.+|+||||.|.+.+|.| ||++.++.++||+|...++.|++.+...|+||.+||
T Consensus         5 Wy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV   77 (109)
T d2shpa2           5 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELV   77 (109)
T ss_dssp             TBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHH
T ss_pred             cccCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCcEEEEEEEEcCCeEEEcCCcccCCHHHHH
Confidence            99999999999999964 458999999999999999 999999999999999888899998888999999986

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-29  Score=127.70  Aligned_cols=71  Identities=32%  Similarity=0.545  Sum_probs=65.1

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.  .++|+||||.|++.++.| |||+.++.++||+|.++ ++.|++.+...|+||.+||
T Consensus         4 Wy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   78 (100)
T d1rjaa_           4 WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELV   78 (100)
T ss_dssp             CBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHH
T ss_pred             CcCCCCCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEcCCCceEEEEEECCCCCEEecCCCccCCHHHHH
Confidence            99999999999999964  488999999999999999 99999999999999887 5679998778899999986

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.7e-28  Score=127.21  Aligned_cols=71  Identities=32%  Similarity=0.563  Sum_probs=65.0

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|..  .++|+||||+|++.+|.| ||++.++.|+||+|.+.+ +.|++.+...|+||.+||
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV   81 (129)
T d1a81a1           7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLC   81 (129)
T ss_dssp             TBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             cccCCCCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCHHHHH
Confidence            99999999999999953  488999999999999999 999999999999998874 679998778899999996

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-27  Score=122.23  Aligned_cols=71  Identities=21%  Similarity=0.509  Sum_probs=65.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC-------CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE-------EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~-------~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|+..++.| ||++.++.++|++|...++.|.++..       ..|+||.+||
T Consensus        17 Wy~g~i~R~~Ae~~L~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~F~sl~~LI   95 (103)
T d2c9wa2          17 WYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLI   95 (103)
T ss_dssp             CBCTTCCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHH
T ss_pred             CcCCCCCHHHHHHHhcCCCCCceEEeccCCCCCCEEEEEEECCEEEEEEEEEcCCeEeeCCccccccCCCccCCHHHHH
Confidence            99999999999999998899999999999999999 99999999999999998888888643       5699999996

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.4e-28  Score=125.58  Aligned_cols=71  Identities=24%  Similarity=0.342  Sum_probs=65.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCC----CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDE----EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~----~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|++.++.| ||++.++.++|++|...++.|.+...    ..|+||.+||
T Consensus        13 Wy~g~isR~~Ae~lL~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~l~~~~~~~~~F~sl~~LV   88 (112)
T d2izva2          13 CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLL   88 (112)
T ss_dssp             TEEEECCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHH
T ss_pred             CcCCCCCHHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEecCCceEEEEEEeCCeEEEeecccCcccCCCHHHHH
Confidence            99999999999999998899999999999889999 99999999999999999999998643    3699999986

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=7e-28  Score=123.28  Aligned_cols=71  Identities=34%  Similarity=0.676  Sum_probs=62.7

Q ss_pred             CcccCCCHHHHHHhh-CCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-CCeEEECCC-----CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHLTIDDE-----EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L-~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~~~~~~~~~-----~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++| +..++|+||||+|++.+|.| ||++.++.|+||+|.+. ++.|++...     ..|+||.+||
T Consensus         5 Wy~g~isR~~AE~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~LV   83 (103)
T d1i3za_           5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELV   83 (103)
T ss_dssp             TEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHH
T ss_pred             cccCCCCHHHHHHHHHhCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHHH
Confidence            999999999999988 56789999999999999999 99999999999999876 567877532     4699999986

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.6e-28  Score=127.02  Aligned_cols=71  Identities=25%  Similarity=0.425  Sum_probs=65.1

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|+  ..++|+||||.|++.++.| ||++.++.++||+|.+.+ +.|++.+...|+||.+||
T Consensus         8 Wy~g~i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv   82 (130)
T d2oq1a1           8 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELC   82 (130)
T ss_dssp             TBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             CccCCCCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCHHHHH
Confidence            9999999999999996  3589999999999999999 999999999999998774 679998778899999986

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-27  Score=121.23  Aligned_cols=71  Identities=38%  Similarity=0.784  Sum_probs=61.2

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCC----eEEECCC-CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA----HLTIDDE-EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~----~~~~~~~-~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.  ..++|+||||.|++.+|.| ||++.+++|.||+|.+.++    .|.+.+. ..|+||.+||
T Consensus         7 Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LV   85 (105)
T d1nrva_           7 WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLV   85 (105)
T ss_dssp             TBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhcCCCCceEEEEeCCCCCCCEEEEEEECCceeEEEEEEecCCCeEEEEECCCCcccCCHHHHH
Confidence            9999999999999995  4588999999999999999 9999999999999987532    3566543 6799999986

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.6e-28  Score=123.93  Aligned_cols=71  Identities=32%  Similarity=0.630  Sum_probs=61.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCe-----------------EEECCCC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-----------------LTIDDEE   62 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~-----------------~~~~~~~   62 (71)
                      ||||.|+|++||++|++.++|+||||.|++.++.| ||++.+++++||+|.+.+++                 +++.++.
T Consensus         2 Wy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~~~~~LS~~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (109)
T d2eyva1           2 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQ   81 (109)
T ss_dssp             SCCBCCCHHHHHHHCSSCSTTCEEEECCCSSSSCEEEEEEETTEEEEEEEECCCCSSCCCSSSSCCCCSCCCCCEEETTE
T ss_pred             CCCCCCCHHHHHHHhcCCCCCeEEeeecCCCCCCEEEEEEECCEEEEEEEEEcCCcceeeccccccccccccceEEeCCe
Confidence            99999999999999988899999999999999999 99999999999999876432                 2223345


Q ss_pred             CcCChhHhC
Q psy12414         63 FFENLAQLV   71 (71)
Q Consensus        63 ~F~sl~~Lv   71 (71)
                      .|+||.+||
T Consensus        82 ~F~sl~~LV   90 (109)
T d2eyva1          82 EFDSLPALL   90 (109)
T ss_dssp             EESSHHHHH
T ss_pred             eeCCHHHHH
Confidence            799999986

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.7e-28  Score=123.12  Aligned_cols=68  Identities=37%  Similarity=0.615  Sum_probs=62.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+  ++|+||||.|++.+|.| ||++.++.++||+|...++.|.+. ...|+||.|||
T Consensus         9 WyhG~i~R~~Ae~lL~--~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~-~~~F~sl~~LV   77 (104)
T d1mila_           9 WFHGKLSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK-DHRFESVSHLI   77 (104)
T ss_dssp             TBCSSCCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECS-SCEESSHHHHH
T ss_pred             CcCCCCCHHHHHHHHh--cCCcEEEEecCCCCCCEEEEEEEccccceEEEEeCCCEEEeC-CeeECCHHHHH
Confidence            9999999999999996  78999999999999999 999999999999998777788776 57899999996

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-27  Score=121.53  Aligned_cols=71  Identities=30%  Similarity=0.504  Sum_probs=63.1

Q ss_pred             CcccCCCHHHHHHhh--CCCCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L--~~~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|  ...++|+||||+|++.+|.| |||+.     ++.|+||+|... ++.|++.+...|+||.|||
T Consensus         3 Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~LV   82 (103)
T d1qcfa2           3 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELV   82 (103)
T ss_dssp             TEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecCCcccCCHHHHH
Confidence            999999999999988  34689999999999999999 99985     468999999887 4678887778899999996

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=2.6e-29  Score=125.09  Aligned_cols=71  Identities=27%  Similarity=0.580  Sum_probs=60.2

Q ss_pred             CcccCCCHHHHHHhhCC---CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP---KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~---~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|+.   +++|+||||.|++.++.| ||++.++.++||+|.+.++++++.+...|+||.+||
T Consensus         7 Wyhg~isR~~Ae~lL~~~~~~~dG~FLvR~S~~~~g~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~LV   81 (86)
T d1rpya_           7 WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDML   81 (86)
T ss_dssp             TBCTTCCHHHHHHHHHTTGGGGTTCEEEEECSSSTTCEEEEEEETTEEEEEEC----CCCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhCCCCCCceEEEEecCCCCCcEEEEEEECCceEEEEEEEcCCceEEeCCCeeCCHHHHH
Confidence            99999999999999965   367999999999999999 999999999999999887666665568899999986

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=4.4e-27  Score=120.91  Aligned_cols=70  Identities=31%  Similarity=0.500  Sum_probs=61.3

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEEC-CCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID-DEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~-~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|++.++|+||||.|+ .++.| ||++.+++++||+|.+.++++++. ....|+||.+||
T Consensus        11 Wy~g~isR~eAe~lL~~~~~G~FLVR~S~-~~~~y~Lsv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI   82 (107)
T d1qada_          11 WNVGSSNRNKAENLLRGKRDGTFLVRESS-KQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELV   82 (107)
T ss_dssp             TEEEECCHHHHHHHHTTCCTTEEEEEEC----CCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHcCCCCCcEEEEecC-CCCCEEEEEEecCCeEEEEEEECCCCeEEcCCCCccCCHHHHH
Confidence            99999999999999998999999999994 58899 999999999999999988766664 457799999986

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.7e-27  Score=122.91  Aligned_cols=70  Identities=30%  Similarity=0.587  Sum_probs=63.0

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|+.  .++|+||||.|++ ++.| |||+.++.++||+|.+++ +.|.+.+...|+||.+||
T Consensus        31 Wyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~-~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV  104 (124)
T d2oq1a2          31 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLV  104 (124)
T ss_dssp             TBCSSCCHHHHHHHHHSSCCCTTEEEEEECSS-TTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHH
T ss_pred             CccCCCCHHHHHHHHhhcCCCCceEEeEecCC-CCCEEEEeecCCceEEEEEEECCCCCEEeCCCcccCCHHHHH
Confidence            99999999999999953  5889999999965 7899 999999999999999874 678888778999999986

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5e-27  Score=120.36  Aligned_cols=71  Identities=32%  Similarity=0.512  Sum_probs=62.5

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEeC-----CeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFE-----SKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~~-----~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.  +.++|+||||.|++.+|.| ||++..     ..|+|++|... ++.|++.+...|+||.+||
T Consensus         6 Wy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~~~~~~~~~~F~sl~~LV   85 (105)
T d1lkka_           6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV   85 (105)
T ss_dssp             TBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcccCCCccEEEEEEEEcCCCCEEecCCcccCCHHHHH
Confidence            9999999999999884  4689999999999999999 999863     24899999886 5688988788899999986

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.1e-27  Score=119.71  Aligned_cols=71  Identities=42%  Similarity=0.713  Sum_probs=64.5

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeC----------CeEEEEEEEeeCCeEEECCCCCcCChh
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFE----------SKVEHYRVKYKEAHLTIDDEEFFENLA   68 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~----------~~v~h~~I~~~~~~~~~~~~~~F~sl~   68 (71)
                      ||||.|+|++||++|++ .++|+||||.|++.+|.| ||++..          +.++|+.|...+++|++.+...|+||.
T Consensus         2 WyhG~i~R~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~F~sl~   81 (108)
T d2shpa3           2 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLT   81 (108)
T ss_dssp             TBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSHH
T ss_pred             CCcCCCCHHHHHHHHhhcCCCCeEEEEecCCCCCCeEEEEEecCccccccccccceeeEEEEeCCCceEeCCCcccCCHH
Confidence            99999999999999964 588999999999999999 999974          458999998889999998889999999


Q ss_pred             HhC
Q psy12414         69 QLV   71 (71)
Q Consensus        69 ~Lv   71 (71)
                      |||
T Consensus        82 ~LV   84 (108)
T d2shpa3          82 DLV   84 (108)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.5e-27  Score=122.88  Aligned_cols=70  Identities=43%  Similarity=0.811  Sum_probs=62.3

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.  +.++|+||||.|+. ++.| ||++.++.++||+|.+++ +.|++++...|+||.+||
T Consensus        31 Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~-~~~yvLSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI  104 (125)
T d1a81a2          31 WFHGKISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV  104 (125)
T ss_dssp             TEEEECCHHHHHHHHHSSCCCTTCEEEEECSS-SSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCceEEEEecCC-CCCEEEEeeccccceeEeeeEcCCCcEeccCCcccCCHHHHH
Confidence            9999999999999883  56899999999865 7889 999999999999999874 578887778899999986

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-26  Score=118.87  Aligned_cols=71  Identities=35%  Similarity=0.698  Sum_probs=61.7

Q ss_pred             CcccCCCHHHHHHhhCC-CCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEEC-----CCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTID-----DEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~-~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~-----~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.. ..+|+||||.|++.++.| ||++.++.+.||+|.+.+ +.|.+.     +...|+||.+||
T Consensus         6 wyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~~Li   84 (104)
T d1d4ta_           6 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLI   84 (104)
T ss_dssp             TBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHH
T ss_pred             ccccCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEecCCCceEEEEEEcCCCcEEEeeccCCCCcccCCHHHHH
Confidence            99999999999999964 568999999999999999 999999999999999874 555553     236799999986

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-26  Score=118.51  Aligned_cols=71  Identities=32%  Similarity=0.573  Sum_probs=63.1

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEe-----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCF-----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~-----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.  ..++|+||||.|++.+|.| ||++.     ++.|+|++|... ++.|++.+...|+||.+||
T Consensus         8 Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~LV   87 (104)
T d1g83a2           8 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV   87 (104)
T ss_dssp             SBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECSSSCEEEEEEEEEECTTSCEEETTTEEESSHHHHH
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeecCcCCeEEEEEEEEcCCCCEEecCCcccCCHHHHH
Confidence            9999999999999885  3589999999999999999 99986     467999999876 4688888788999999986

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.7e-26  Score=119.70  Aligned_cols=71  Identities=48%  Similarity=0.826  Sum_probs=61.1

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEee-C-C--eEEECCC-CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-E-A--HLTIDDE-EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~-~-~--~~~~~~~-~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.  ..++|+||||.|++.++.| ||++.+++++||+|... + +  .|.+.+. ..|+||.|||
T Consensus        12 Wy~g~isR~~Ae~lL~~~g~~dG~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LI   90 (113)
T d2qmsa1          12 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLV   90 (113)
T ss_dssp             TEEEEBCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEEESSSCEEEESSTTSSCBSSHHHHH
T ss_pred             ccCCCCCHHHHHHHHhccCCCCccEEEEeccCCCCCEEEEEEeCCeEEEEEEEEeCCCCeEEEEecCCCcccCCHHHHH
Confidence            9999999999999995  4689999999999999999 99999999999999864 2 3  3455543 5799999986

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-26  Score=118.07  Aligned_cols=71  Identities=35%  Similarity=0.588  Sum_probs=62.7

Q ss_pred             CcccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEeC-----CeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFE-----SKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~~-----~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++  .++|+||||.|++.+|.| ||++..     ..|+||+|.+. ++.|++.+...|+||.|||
T Consensus         7 Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g~~~~~~~~~F~sl~eLV   86 (106)
T d1o48a_           7 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV   86 (106)
T ss_dssp             TEEESCCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHH
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEecccCcccceEEEEEEEecCCCEEEcCCeeECCHHHHH
Confidence            99999999999999964  589999999999999999 999863     46889999886 5688888778899999996

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=3.4e-27  Score=121.05  Aligned_cols=69  Identities=32%  Similarity=0.655  Sum_probs=60.8

Q ss_pred             CcccCCCHHHHHHhhCCC-CCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~-~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.+. .+|+||||.| +.++.| ||++.++.++||+|.++++.|.++ ...|+||.+||
T Consensus        11 Wy~g~i~R~eAe~lL~~~~~~G~FLVR~S-~~~~~yvLSv~~~~~v~H~~I~~~~~~~~~~-~~~F~sl~~LV   81 (105)
T d2fcia1          11 WYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEGKIKHCRVQQEGQTVMLG-NSEFDSLVDLI   81 (105)
T ss_dssp             CCCSSSCSHHHHHHHHHSSSSCCEEEEEC-SSTTCEEEEEEETTEECCCEEBCCSSCEECS-SSEESTTHHHH
T ss_pred             CccCCCCHHHHHHHHHhCCCCCeEEEEec-CCCCCEEEEEEeccccEEEEEEecCCeEecC-CcccCCHHHHH
Confidence            999999999999999654 5899999999 458999 999999999999998776677765 57899999986

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-26  Score=123.37  Aligned_cols=68  Identities=34%  Similarity=0.566  Sum_probs=60.0

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.+ ++|+||||.|++.+|.| ||++.++.++||+|.++ +++++. ...|+||.|||
T Consensus        37 wyhG~isR~eAe~lL~~-~dGsFLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~-g~~~~~-~~~F~sl~eLV  105 (141)
T d1xa6a2          37 EFHGIISREQADELLGG-VEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHD-GKHFVG-EKRFESIHDLV  105 (141)
T ss_dssp             SEEEECCHHHHHHHHCS-CTTBEEEEECSSSTTCEEEEEEETTEEEECCCEES-SSEECS-SSCCCCSSHHH
T ss_pred             eeeccCCHHHHHHHHcC-CCCeEEEEecCCCCCCEEEEEEECCEEEEEEEEEC-CCEEEC-CCeECCHHHHH
Confidence            99999999999999964 57999999999989999 99999999999999874 555565 35799999986

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=2e-26  Score=119.59  Aligned_cols=71  Identities=34%  Similarity=0.496  Sum_probs=62.8

Q ss_pred             CcccCCCHHHHHHhhC--CCCCceEEEEecCCCCCce-EEEEe----CCeEEEEEEEee-CCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLA--PKEDGLFLVRESTNFPQDF-MCVCF----ESKVEHYRVKYK-EAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~--~~~~G~fliR~s~~~~~~~-Ls~~~----~~~v~h~~I~~~-~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|.  ..++|+||||.|++.++.| ||++.    ++.|+||+|.+. ++.|++.+...|+||.|||
T Consensus        14 Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~v~H~~i~~~~~g~~~l~~~~~F~sl~eLV   92 (114)
T d1blja_          14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALV   92 (114)
T ss_dssp             SBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHH
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeeccCCCEEEEEEEEEcCCCCEEecCCceECCHHHHH
Confidence            9999999999999884  4689999999999999999 99985    356999999987 4689998778899999996

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=3e-27  Score=122.12  Aligned_cols=71  Identities=24%  Similarity=0.490  Sum_probs=64.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCC-CCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNF-PQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~-~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||||.|+|++||++|++.++|+||||.|++. ++.| |+++.++.+.|++|...++.|++.+...|+||.+||
T Consensus        13 WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~~ls~~~~~~~~H~~I~~~~~~~~~~~~~~F~sl~~LV   85 (111)
T d1fu6a_          13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNSVVELI   85 (111)
T ss_dssp             SCCSSCCSHHHHHHSSSCSSCCCCCBSSCCSSSCCSBCEEEETTEEEECCCCCTTTCCCTTTTSCCCCTTHHH
T ss_pred             CCCCCCCHHHHHHHhCcCCCCEEEEEeccCCCCccEEEEEecCCceEEEEEEEcCCeEEECCCcccCCHHHHH
Confidence            9999999999999999888999999998765 4568 999999999999998888889998778999999986

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.9e-26  Score=115.82  Aligned_cols=70  Identities=37%  Similarity=0.557  Sum_probs=61.8

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeCCeEEEEEEEeeC-CeEEECCC-CCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKE-AHLTIDDE-EFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~~~v~h~~I~~~~-~~~~~~~~-~~F~sl~~Lv   71 (71)
                      ||||.|+|++|+++|++.++|+||||.|+..++ | |+++.++.++||+|...+ +.|++.+. ..|+||.|||
T Consensus        11 Wy~g~isR~eAe~lL~~~~~G~FLvR~S~~~~~-y~Lsv~~~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV   83 (106)
T d2cs0a1          11 WFHGAISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALV   83 (106)
T ss_dssp             SBCSSCCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHH
T ss_pred             CccCCCCHHHHHHHHcCCCCCcEEEEecCCCCC-EEEEEEecCCceeEEEEEcCCCCEEEecCCccCCCHHHHH
Confidence            999999999999999988999999999977665 8 999999999999998875 56776544 6799999986

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=2e-25  Score=114.83  Aligned_cols=70  Identities=29%  Similarity=0.642  Sum_probs=59.8

Q ss_pred             CcccCCCHHHHHHhhC-CCCCceEEEEecCCCCCce-EEEEe------CCeEEEEEEEeeC---CeEEECCCCCcCChhH
Q psy12414          1 WFHGKISRETAESLLA-PKEDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKYKE---AHLTIDDEEFFENLAQ   69 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~-~~~~G~fliR~s~~~~~~~-Ls~~~------~~~v~h~~I~~~~---~~~~~~~~~~F~sl~~   69 (71)
                      ||||.|+|++||++|. ..++|+||||+|++ ++.| ||++.      +..++||+|....   ..|++.+...|+||.+
T Consensus         8 Wy~g~isR~eAe~lL~~~~~~G~FLVR~S~~-~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~~~~~~~~~~F~sl~~   86 (108)
T d1luia_           8 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL   86 (108)
T ss_dssp             TBCTTCCHHHHHHHHHHHCCTTEEEEEECCT-TTCEEEEEECSCCTTTCSCEEEEECEECCCSSCCEESSSSCCBSSHHH
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCeEEEEecCC-CCCEEEEEEecCCcccCCceeEEEEEEecCCCceeecCCCcccCCHHH
Confidence            9999999999999995 46889999999965 8999 99986      3569999998753   2577777789999999


Q ss_pred             hC
Q psy12414         70 LV   71 (71)
Q Consensus        70 Lv   71 (71)
                      ||
T Consensus        87 LV   88 (108)
T d1luia_          87 LI   88 (108)
T ss_dssp             HH
T ss_pred             HH
Confidence            96

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.81  E-value=1.7e-20  Score=98.98  Aligned_cols=55  Identities=22%  Similarity=0.417  Sum_probs=49.6

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCCCCce-EEEEeC---CeEEEEEEEeeCCe
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFE---SKVEHYRVKYKEAH   55 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~~~~~-Ls~~~~---~~v~h~~I~~~~~~   55 (71)
                      ||+|.|+|++|+++|++.++|+||||.|++.+|.| ||++..   +.++||+|...++.
T Consensus        11 ~~~G~isr~~ae~~L~~~~~GtFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~~~   69 (131)
T d1uura3          11 IIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA   69 (131)
T ss_dssp             SSCBSCCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGSB
T ss_pred             cEEccCCHHHHHHHHhcCCCCeEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecCCC
Confidence            89999999999999998899999999999999999 999973   67999999765443

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=3.7e-19  Score=94.62  Aligned_cols=69  Identities=20%  Similarity=0.242  Sum_probs=57.2

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecC-CCCCce-EEEEeCCeEEEEEEEeeCCeEEECCCCCcCChhHhC
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVREST-NFPQDF-MCVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQLV   71 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~-~~~~~~-Ls~~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~Lv   71 (71)
                      ||+|.|+|++|+++|++.++|+||||.|+ +.+|.+ ++++..+...|++|...+. |... ...|.||.|+|
T Consensus         9 w~~G~isr~~a~~~L~~~~~GtFLvR~S~~s~~G~~tis~~~~~~~~~~~i~~~~p-~t~~-dl~~~sL~dlI   79 (141)
T d1bg1a3           9 YIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEP-YTKQ-QLNNMSFAEII   79 (141)
T ss_dssp             CCCBCCCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCCC-BCGG-GGTSSCHHHHT
T ss_pred             eEEEeCCHHHHHHHhhCCCCCeEEEEecCCccCCCEEEEEEecCcCCceEEeecCC-eecC-ccccCCHHHHH
Confidence            99999999999999998999999999997 568999 9999888888888864433 3332 45688998876

>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=2.9e-09  Score=55.92  Aligned_cols=40  Identities=28%  Similarity=0.319  Sum_probs=34.9

Q ss_pred             CcccCCCHHHHHHhhCCCCCceEEEEecCCC-CCce-EEEEe
Q psy12414          1 WFHGKISRETAESLLAPKEDGLFLVRESTNF-PQDF-MCVCF   40 (71)
Q Consensus         1 w~~g~i~r~~a~~~L~~~~~G~fliR~s~~~-~~~~-Ls~~~   40 (71)
                      |..|.|++++|+++|+++++|+||+|.|++. +|.. ++...
T Consensus         9 ~I~GFIsK~~a~~~L~~~~~GTFLLRFSdS~~~GgitiawV~   50 (142)
T d1bf5a3           9 CIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVE   50 (142)
T ss_dssp             CCCCCCCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECC
T ss_pred             EEEEEecHHHHHHHhhCCCCceEEEEeccCccCCceEEEEEE
Confidence            3468999999999999999999999999986 5888 77765

>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Cbl
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.0066  Score=28.26  Aligned_cols=39  Identities=10%  Similarity=0.193  Sum_probs=33.0

Q ss_pred             cccCCCHHHHHHhhCC--CCCceEEEEecCCCCCce-EEEEe
Q psy12414          2 FHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCF   40 (71)
Q Consensus         2 ~~g~i~r~~a~~~L~~--~~~G~fliR~s~~~~~~~-Ls~~~   40 (71)
                      |...++-+|+...|+.  ..+|+|+.|-|-+..|.+ +-...
T Consensus         5 Y~AFlTYDevk~rL~~~~~kPGSYiFRlSCTrlGQWAIGyvt   46 (88)
T d3buxb3           5 YMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVT   46 (88)
T ss_dssp             BCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEEC
T ss_pred             eeEEEeHHHHHHHHHHHhcCCCceEEeeccccccceeeeeec
Confidence            4567888999998873  689999999999999999 87776

>d1wlha1 b.1.18.10 (A:547-647) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

Probab=92.75  E-value=0.11  Score=24.44  Aligned_cols=27  Identities=15%  Similarity=0.295  Sum_probs=23.1

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .++.+|+|.++.....+|.| |++..++
T Consensus        60 ~~~~dGty~v~y~p~~~G~y~i~V~~~g   87 (101)
T d1wlha1          60 VDNGDGTYDVEFEPKEAGDYVINLTLDG   87 (101)
T ss_dssp             CCCSSSEEEEEECCCSCSEEEEEEEESS
T ss_pred             EEcCCCeEEEEEEeCCCccEEEEEEECC
Confidence            35688999999999999999 9998854

>d2w0pa1 b.1.18.10 (A:2237-2328) Filamin a {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.66  E-value=0.11  Score=24.40  Aligned_cols=27  Identities=26%  Similarity=0.385  Sum_probs=22.4

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      +..+|+|.++..+..+|.| ++++.++.
T Consensus        51 d~~dg~y~v~ytP~~~G~y~i~V~~~g~   78 (92)
T d2w0pa1          51 DRKDGSCGVAYVVQEPGDYEVSVKFNEE   78 (92)
T ss_dssp             ECTTSCEEEEEECSSCEEEEEEEEETTE
T ss_pred             ECCCCEEEEEEEECCCceEEEEEEECCE
Confidence            4578999999998889999 99988653

>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.44  E-value=0.091  Score=24.81  Aligned_cols=27  Identities=11%  Similarity=0.222  Sum_probs=21.5

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      +..+|.|.++......|.| |+++.++.
T Consensus        55 ~~~dg~y~v~y~P~~~G~h~i~V~~~g~   82 (100)
T d2diaa1          55 NNKDGTYAVTYVPLTAGMYTLTMKYGGE   82 (100)
T ss_dssp             ECTTSEEEEEEECSSCEEEEEEEEETTE
T ss_pred             ECCCCEEEEEEEeCcCccEEEEEEECCE
Confidence            4577889998888888888 88888644

>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.38  E-value=0.17  Score=23.88  Aligned_cols=27  Identities=22%  Similarity=0.267  Sum_probs=22.7

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ....+|.|.++..+..+|.| |++..++
T Consensus        52 ~~~~dg~y~v~y~P~~~G~y~i~V~~~g   79 (98)
T d2di8a1          52 EDLEDGTCKVSYFPTVPGVYIVSTKFAD   79 (98)
T ss_dssp             CBCTTSCEEEEECCCSCSEEEEEEEESS
T ss_pred             EECCCCEEEEEEEECCCceEEEEEEECC
Confidence            34578999999999999999 9998854

>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.085  Score=25.06  Aligned_cols=26  Identities=15%  Similarity=0.247  Sum_probs=21.5

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ...+|+|.++..+..+|.| |.++.++
T Consensus        56 ~~~dG~y~v~y~P~~~G~y~i~V~~~g   82 (101)
T d2dj4a1          56 DNGDGTHTVTYTPSQEGPYMVSVKYAD   82 (101)
T ss_dssp             ECSSSEEEEEECCSSCEEEEEEEEESS
T ss_pred             eCCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            4578899999988888999 8888854

>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.58  E-value=0.096  Score=24.95  Aligned_cols=26  Identities=12%  Similarity=0.342  Sum_probs=21.6

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .+.+|+|.++..+..+|.| |.++.++
T Consensus        57 ~~~dg~y~v~y~P~~~G~h~i~V~~~g   83 (102)
T d2d7ma1          57 DNGDGTYTVSYLPDMSGRYTITIKYGG   83 (102)
T ss_dssp             ECSSSCEEEEECCCSCEEEEEEEEESS
T ss_pred             eCCCcEEEEEEEECCCEeEEEEEEECC
Confidence            4577999999999889999 9888854

>d2d7na1 b.1.18.10 (A:8-87) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.41  E-value=0.096  Score=23.99  Aligned_cols=26  Identities=19%  Similarity=0.249  Sum_probs=22.1

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .+.+|+|-++..+...|.| |+++.++
T Consensus        35 ~~~dg~y~v~y~P~~~G~h~v~V~~~g   61 (80)
T d2d7na1          35 DNKDGTITVRYAPTEKGLHQMGIKYDG   61 (80)
T ss_dssp             ECSSSCEEEEECCSSCEEEEEEEEESS
T ss_pred             ECCCCEEEEEEEECCcEEEEEEEEECC
Confidence            4578999999999999999 9998854

>d1qfha1 b.1.18.10 (A:646-749) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

Probab=89.95  E-value=0.21  Score=23.56  Aligned_cols=27  Identities=15%  Similarity=0.283  Sum_probs=22.7

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      +..+|+|-++.....+|.| |.+..++.
T Consensus        64 d~~dGtY~v~y~p~~~G~~~i~V~~~g~   91 (104)
T d1qfha1          64 DNNDGTYGVVYDAPVEGNYNVNVTLRGN   91 (104)
T ss_dssp             ECSSSEEEEEECCCSSEEEEEEEEETTE
T ss_pred             ECCCCEEEEEEEeCCCEeEEEEEEECCE
Confidence            4578999999999889999 99988654

>d2dica1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.89  E-value=0.25  Score=23.17  Aligned_cols=27  Identities=15%  Similarity=0.266  Sum_probs=22.3

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      ...+|+|.++..+...|.| |++++++.
T Consensus        53 ~~~dg~y~v~y~P~~~G~y~i~V~~~g~   80 (98)
T d2dica1          53 DNKDGSCSAEYIPFAPGDYDVNITYGGA   80 (98)
T ss_dssp             ECSSSCEEEEECCSSCEEEEEEEEETTE
T ss_pred             ECCCCEEEEEEEECCCceEEEEEEECCE
Confidence            4578999999998889999 99988643

>d1v05a_ b.1.18.10 (A:) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.71  E-value=0.16  Score=23.80  Aligned_cols=27  Identities=11%  Similarity=0.196  Sum_probs=20.0

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      ...+|.|.++..+...|.| +++..++.
T Consensus        57 ~~~~g~y~v~y~P~~~G~~~v~V~~~g~   84 (96)
T d1v05a_          57 HMGNRVYNVTYTVKEKGDYILIVKWGDE   84 (96)
T ss_dssp             ECSTTEEEEEEECSSCEEEEEEEEETTE
T ss_pred             ECCCCEEEEEEEeCCCccEEEEEEECCE
Confidence            4577888888887778888 88877553

>d2d7pa1 b.1.18.10 (A:8-106) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.38  E-value=0.24  Score=23.34  Aligned_cols=27  Identities=11%  Similarity=0.016  Sum_probs=21.8

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      ....+|.|.++..+..+|.| |.+..++
T Consensus        53 ~~~~dg~y~v~y~P~~~G~~~i~V~~~g   80 (99)
T d2d7pa1          53 SELDSDKHTIRFIPHENGVHSIDVKFNG   80 (99)
T ss_dssp             CSCBTTEEEEEECCSSCEEEEEEEEESS
T ss_pred             EeCCCCEEEEEEEECCCCcEEEEEEECC
Confidence            34578899999988888999 8888754

>d2diba1 b.1.18.10 (A:8-122) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.44  E-value=0.14  Score=24.77  Aligned_cols=26  Identities=15%  Similarity=0.174  Sum_probs=20.9

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +..+|+|.++.....+|.| |.+..++
T Consensus        70 ~~~dG~y~v~y~P~~~G~~~i~V~~~g   96 (115)
T d2diba1          70 DNADGTYQVEYTPFEKGLHVVEVTYDD   96 (115)
T ss_dssp             ECSSSEEEEEECCSSCSEEEEEEBSSS
T ss_pred             ECCCCEEEEEEEeCCCEeEEEEEEECC
Confidence            4578899999888888888 8888753

>d2bp3a1 b.1.18.10 (A:1863-1954) Filamin a {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.08  E-value=0.42  Score=22.12  Aligned_cols=26  Identities=23%  Similarity=0.404  Sum_probs=19.8

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      .+.+|.|.+...+...|.| |+++.++
T Consensus        52 ~~~dg~y~v~ytP~~~G~h~i~V~~~g   78 (92)
T d2bp3a1          52 DNQDGTCSVSYLPVLPGDYSILVKYNE   78 (92)
T ss_dssp             ECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred             ECCCCEEEEEEEECCCccEEEEEEECC
Confidence            3467888888888888888 8887754

>d2di9a1 b.1.18.10 (A:8-125) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.89  E-value=0.42  Score=23.02  Aligned_cols=26  Identities=23%  Similarity=0.369  Sum_probs=21.1

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +..+|+|.++......|.| |++..++
T Consensus        73 ~~~dG~y~v~ytP~~~G~y~i~V~~~g   99 (118)
T d2di9a1          73 DNGDGTCSVSYLPTKPGEYFVNILFEE   99 (118)
T ss_dssp             ECSSSEEEEEEECSSSSEEEEEEEESS
T ss_pred             ECCCCEEEEEEEeCCcEeEEEEEEECC
Confidence            4577889999888888888 8888754

>d1qfha2 b.1.18.10 (A:750-857) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

Probab=86.47  E-value=0.24  Score=23.82  Aligned_cols=27  Identities=22%  Similarity=0.190  Sum_probs=22.6

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      +..+|+|.++..+..+|.| |+++.++.
T Consensus        50 d~~dGty~v~y~p~~~G~y~v~V~~~g~   77 (108)
T d1qfha2          50 DNQDGTYTAAYSLVGNGRFSTGVKLNGK   77 (108)
T ss_dssp             ECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred             ECCCCEEEEEEEECcceeEEEEEEECCE
Confidence            4678999999988889999 99988654

>d2j3sa2 b.1.18.10 (A:2149-2236) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.43  E-value=0.14  Score=23.70  Aligned_cols=28  Identities=11%  Similarity=0.133  Sum_probs=17.2

Q ss_pred             CCCCCceEEEEecCCCCCce-EEEEeCCe
Q psy12414         16 APKEDGLFLVRESTNFPQDF-MCVCFESK   43 (71)
Q Consensus        16 ~~~~~G~fliR~s~~~~~~~-Ls~~~~~~   43 (71)
                      ....+|.|.+...+...|.| |++++++.
T Consensus        43 ~~~~~g~y~v~y~P~~~G~h~i~V~~~g~   71 (88)
T d2j3sa2          43 VEGENHTYCIRFVPAEMGTHTVSVKYKGQ   71 (88)
T ss_dssp             -------CCCBCCCCSCEEEEEEEEETTE
T ss_pred             EECCCCEEEEEEEECCceeEEEEEEECCE
Confidence            34567888888888888888 88888653

>d2dmba1 b.1.18.10 (A:8-118) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.46  E-value=0.53  Score=22.51  Aligned_cols=26  Identities=23%  Similarity=0.414  Sum_probs=19.4

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeCC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFES   42 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~~   42 (71)
                      +..+|.|.+.......|.| |.+..++
T Consensus        56 d~~~G~y~v~f~P~~~G~h~i~V~~~g   82 (111)
T d2dmba1          56 ENEDGTYDIFYTAAKPGTYVIYVRFGG   82 (111)
T ss_dssp             ECTTSCEEEEEECSSCEEEEEEEEESS
T ss_pred             ECCCCEEEEEEEECCCCCEEEEEEECC
Confidence            3567888888877778888 8887753

>d2dmca1 b.1.18.10 (A:8-110) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.97  E-value=0.22  Score=23.48  Aligned_cols=25  Identities=0%  Similarity=-0.172  Sum_probs=18.2

Q ss_pred             CCCCceEEEEecCCCCCce-EEEEeC
Q psy12414         17 PKEDGLFLVRESTNFPQDF-MCVCFE   41 (71)
Q Consensus        17 ~~~~G~fliR~s~~~~~~~-Ls~~~~   41 (71)
                      +..+|+|.++..+...|.| +.++++
T Consensus        58 ~~~dg~y~v~f~P~~~G~h~i~V~~~   83 (103)
T d2dmca1          58 RLPNNHIGISFIPREVGEHLVSIKKN   83 (103)
T ss_dssp             EETTTEEEEEECCCSCEEEEEECBBS
T ss_pred             ECCCCEEEEEEEeCCceeEEEEEEEC
Confidence            3466778887777777777 777764