Psyllid ID: psy12647

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Protein Sequence
MIRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEcccccccEccccccEEEcccccHHHEHHHHcccccccccccccccHHEEEcccccccEcccccEEccccHHHHHHHHHcccccccccccccccEccccHHHHHccccEEcccccccccccccccEEccccccccccccccccEccccHHHHHHHHccccccccEcccccccccEcccccHHHHHHHcccccEcccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccccccccccccccEccccHHHHHHHHccccccccEcccccccccEccccHHHHHHHHcccccEcccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MIRIHIGPSVILMLMIMTryslpcvdFIQVHLRlhsgerrfpceycsllvypVLILFRFIFVctqgsadshkhhLKDHVnkihlhpktfscnscgqtwlgYTSWKQHVAACREKRrketfpckrcderfstrdglESFTFSLRLFCLYfpqelishssyhggeerryvcnhmqctrrFHSASLLARHVSTHAIQYtchmcghmftcKRRLTQHLARLhtgslsypctqcpgkfysAYELRQHVrqhtderpfpcpvcqrtfrrkglesFTFSLRLFCLYfpqelishssyhggeerryvcnhmqctrrFHSASLLARHVSTHAIQYtchmcghmftcKRRLTQHLARLhtgslsypctqcpgkfysAYELRQHVrqhtderpfpcpvcqrtfrrkvcttpspqpqhldvl
Flexible Loop (DISEMBL)
MIRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACRekrrketfpckrcderfstrdglESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVrqhtderpfpcpVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRqhtderpfpcpvCQRTfrrkvcttpspqpqhldvl
Low Complexity Region (SEG)
MIRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL
Disordered region (IsUnstruct)
**RIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVC*************
Disordered Region (DISOPRED)
MIRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDV*
Disordered Region (DISEMBL)
MIRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL
Disordered Region (DISPRO)
MIRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQ*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	410	2.2.26 [Sep-21-2011]
Q95K52	654	Zinc finger protein 283 O	N/A	N/A	0.773	0.484	0.308	2e-34
Q3ZCX4	644	Zinc finger protein 568 O	yes	N/A	0.780	0.496	0.305	1e-33
P10076	861	Zinc finger protein 26 OS	yes	N/A	0.860	0.409	0.302	1e-33
Q8N7M2	679	Zinc finger protein 283 O	no	N/A	0.773	0.466	0.306	3e-33
Q5MCW4	686	Zinc finger protein 569 O	no	N/A	0.814	0.486	0.288	3e-33
Q9UJW8	692	Zinc finger protein 180 O	no	N/A	0.790	0.468	0.306	4e-33
Q86UE3	836	Zinc finger protein 546 O	no	N/A	0.763	0.374	0.320	6e-33
Q3SYV7	487	Zinc finger protein 345 O	no	N/A	0.853	0.718	0.293	3e-32
Q99676	751	Zinc finger protein 184 O	no	N/A	0.809	0.442	0.297	6e-32
Q14585	488	Zinc finger protein 345 O	no	N/A	0.773	0.649	0.299	1e-31

>sp|Q95K52|ZN283_MACFA Zinc finger protein 283 OS=Macaca fascicularis GN=ZNF283 PE=2 SV=1

 Score =  146 bits (369), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 160/379 (42%), Gaps = 62/379 (16%)

Query: 28  IQVHLRLHSGERRFPCEYC--------SLLVYPVLILFRFIFVCTQ-GSADSHKHHLKDH 78
           + VH R H+GE+ + C+ C        SL+ +  +      + C + G A S  +HL  H
Sbjct: 226 LNVHQRFHTGEKPYECKECGKTFSWGSSLVKHERIHTGEKPYECKECGKAFSRGYHLTQH 285

Query: 79  VNKIHLHPKTFSCNSCGQTWLGYTSWKQH-VAACREKRRKETFPCKRCDERFSTRDGLES 137
             KIH+  K++ C  CG+ +   +S  +H +    EK     + CK C + FS       
Sbjct: 286 -QKIHIGVKSYKCKECGKAFFWGSSLAKHEIIHTGEK----PYQCKECGKAFSR------ 334

Query: 138 FTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--Y 195
                         +L  H   H G+ + Y C    C + F     L RH   H  +  Y
Sbjct: 335 ------------GYQLTQHQKIHTGK-KPYECK--ICGKAFCWGYQLTRHQIFHTGEKPY 379

Query: 196 TCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP 255
            C  CG  F C   L QH AR+HTG   Y C +C   F   Y L QH + HT E+PF C 
Sbjct: 380 ECKECGKAFNCGSSLIQH-ARIHTGEKPYECKECGKAFSRGYHLSQHQKIHTGEKPFECK 438

Query: 256 VCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLL 315
            C + F                  +   L+ H   H G E+ + C   +C + F S   L
Sbjct: 439 ECGKAFS-----------------WGSSLVKHERVHTG-EKSHECK--ECGKNFCSGYQL 478

Query: 316 ARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH 373
            RH   H  +  Y C  CG  F C   L QH  R+HTG   Y C +C   F   Y L QH
Sbjct: 479 TRHQVFHTGEKPYECKECGKAFNCGSSLVQH-ERIHTGEKPYECKECGKAFSRGYHLTQH 537

Query: 374 VRQHTDERPFPCPVCQRTF 392
            + HT E+PF C  C + F
Sbjct: 538 QKIHTGEKPFKCKECGKAF 556

May be involved in transcriptional regulation.
Macaca fascicularis (taxid: 9541)

>sp|Q3ZCX4|ZN568_HUMAN Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2

 Score =  144 bits (364), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 170/383 (44%), Gaps = 63/383 (16%)

Query: 26  DFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLH 85
           D I+ H R+H+GE+ + C+ C                   G A S K +L  H  KIH  
Sbjct: 236 DLIR-HERIHAGEKPYECKEC-------------------GKAFSRKENLITH-QKIHTG 274

Query: 86  PKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGL---ESFTFSL 142
            K + CN CG+ ++  ++  +H    R    ++ + CK C + FS +  L   E      
Sbjct: 275 EKPYKCNECGKAFIQMSNLIRHH---RIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGE 331

Query: 143 RLF-------CLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ- 194
           + +            Q LI H   H GE + Y CN  +C R F   S +  H+ +H  + 
Sbjct: 332 KPYECKECGKSFSQKQNLIEHEKIHTGE-KPYACN--ECGRAFSRMSSVTLHMRSHTGEK 388

Query: 195 -YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFP 253
            Y C+ CG  F+       H+ R HTG   Y C++C   F  +  L  H+R HT E+P+ 
Sbjct: 389 PYKCNKCGKAFSQCSVFIIHM-RSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYE 447

Query: 254 CPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSAS 313
           C  C + F RK                 + LI+H   H G E+ Y C+  +C + F   S
Sbjct: 448 CKECGKAFSRK-----------------ENLITHQKIHTG-EKPYECS--ECGKAFIQMS 487

Query: 314 LLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELR 371
            L RH   H  +  Y C +CG  F+ K  LT+H  ++HTG   Y C QC   F     L 
Sbjct: 488 NLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEH-EKIHTGEKPYHCNQCGKAFSQRQNLL 546

Query: 372 QHVRQHTDERPFPCPVCQRTFRR 394
           +H + HT E+PF C  C + F R
Sbjct: 547 EHEKIHTGEKPFKCNECGKAFSR 569

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  144 bits (362), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 177/403 (43%), Gaps = 50/403 (12%)

Query: 26  DFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIF-----------VCTQGSADSHKHH 74
            ++ +HLR H+GER +PC  C         L   I            VC +   +S    
Sbjct: 399 SWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNSSC-- 456

Query: 75  LKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDG 134
           LK H  +IH   K + CN CG+ +   +   +HV        ++ + CK C + FST  G
Sbjct: 457 LKTHF-RIHTGIKPYKCNYCGKAFTARSGLTKHVLI---HNGEKPYECKECGKAFSTSSG 512

Query: 135 LESF----TFSLRLFC------LYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLL 184
           L       T      C      L     L+ H   H GE + + CN  QC + F  +S L
Sbjct: 513 LVEHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGE-KPFECN--QCDKTFTRSSYL 569

Query: 185 ARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH 242
             H+ TH  +  Y C  CG  F  +  LT+H+ R HTG   Y C +C   F S  +L  H
Sbjct: 570 RIHMRTHTGEKPYECKECGKTFPERSCLTKHI-RTHTGERPYECKECGKGFISFAQLTVH 628

Query: 243 VRQHTDERPFPCPVCQRTFRRK-----------GLESFTFSLRLFCLYFPQELISHSSYH 291
           ++ H+ ERPF C VC ++FR             G++ +  S           L  H   H
Sbjct: 629 IKTHSSERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNH 688

Query: 292 GGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLH 349
            G E+ Y C   +C + F ++S L  H+ +H  +  + C  CG  F     L  HL ++H
Sbjct: 689 TG-EKSYAC--QECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHL-KIH 744

Query: 350 TGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTF 392
           TG   + CT C   F  +  L  H+R HT E+PF C +C ++F
Sbjct: 745 TGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSF 787

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q8N7M2|ZN283_HUMAN Zinc finger protein 283 OS=Homo sapiens GN=ZNF283 PE=2 SV=4

 Score =  143 bits (360), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 158/379 (41%), Gaps = 62/379 (16%)

Query: 28  IQVHLRLHSGERRFPCEYC--------SLLVYPVLILFRFIFVCTQ-GSADSHKHHLKDH 78
           + VH R H+GE+ + C+ C        SL+ +  +      + C + G A S  +HL  H
Sbjct: 250 LNVHQRFHTGEKPYECKECGKTFSWGSSLVKHERIHTGEKPYECKECGKAFSRGYHLTQH 309

Query: 79  VNKIHLHPKTFSCNSCGQTWLGYTSWKQH-VAACREKRRKETFPCKRCDERFSTRDGLES 137
             KIH   K++ C  CG+ +   +S  +H +    EK     + CK C + FS       
Sbjct: 310 -QKIHTGVKSYKCKECGKAFFWGSSLAKHEIIHTGEK----PYKCKECGKAFSR------ 358

Query: 138 FTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--Y 195
                         +L  H   H G+ + Y C    C + F     L RH   H  +  Y
Sbjct: 359 ------------GYQLTQHQKIHTGK-KPYECK--ICGKAFCWGYQLTRHQIFHTGEKPY 403

Query: 196 TCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP 255
            C  CG  F C   L QH  R+HTG   Y C +C   F   Y L QH + HT E+PF C 
Sbjct: 404 ECKECGKAFNCGSSLIQH-ERIHTGEKPYECKECGKAFSRGYHLSQHQKIHTGEKPFECK 462

Query: 256 VCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLL 315
            C + F                  +   L+ H   H G E+ + C   +C + F S   L
Sbjct: 463 ECGKAFS-----------------WGSSLVKHERVHTG-EKSHECK--ECGKTFCSGYQL 502

Query: 316 ARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH 373
            RH   H  +  Y C  CG  F C   L QH  R+HTG   Y C +C   F   Y L QH
Sbjct: 503 TRHQVFHTGEKPYECKECGKAFNCGSSLVQH-ERIHTGEKPYECKECGKAFSRGYHLTQH 561

Query: 374 VRQHTDERPFPCPVCQRTF 392
            + HT E+PF C  C + F
Sbjct: 562 QKIHTGEKPFKCKECGKAF 580

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5MCW4|ZN569_HUMAN Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=2 SV=1

 Score =  142 bits (359), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 176/395 (44%), Gaps = 61/395 (15%)

Query: 25  VDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHL 84
           +D I+ HLR+H+GE+ + C  C                     A SHK  L  H  KIH 
Sbjct: 199 LDLIR-HLRIHTGEKPYECSNCR-------------------KAFSHKEKLIKHY-KIHS 237

Query: 85  HPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGL---ESFTFS 141
             +++ CN CG+ ++  ++  +H    R    ++ + CK C++ FS +  L   E     
Sbjct: 238 REQSYKCNECGKAFIKMSNLIRHQ---RIHTGEKPYACKECEKSFSQKSNLIDHEKIHTG 294

Query: 142 LRLF-------CLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ 194
            + +            Q LI+H   H GE + Y CN  +C + F   + LA H+ +H  +
Sbjct: 295 EKPYECNECGKAFSQKQSLIAHQKVHTGE-KPYACN--ECGKAFPRIASLALHMRSHTGE 351

Query: 195 --YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF 252
             Y C  CG  F+    L  H+ R+HTG   Y C +C   F  +  L  H+R HT E+P+
Sbjct: 352 KPYKCDKCGKAFSQFSMLIIHV-RIHTGEKPYECNECGKAFSQSSALTVHMRSHTGEKPY 410

Query: 253 PCPVCQRTFRRKGLESFTFSLRLFCLYFPQE-------------LISHSSYHGGEERRYV 299
            C  C++ F  K  ++F    ++     P E             L+ H   H G E+ Y+
Sbjct: 411 ECKECRKAFSHK--KNFITHQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTG-EKPYI 467

Query: 300 CNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPC 357
           C   +C + F   S L  H   H+ +  Y C+ CG  F+ K+    H  ++HTG   Y C
Sbjct: 468 CK--ECGKAFSQKSNLIAHEKIHSGEKPYECNECGKAFSQKQNFITH-QKVHTGEKPYDC 524

Query: 358 TQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTF 392
            +C   F     L  H+R HT E+P+ C  C + F
Sbjct: 525 NECGKAFSQIASLTLHLRSHTGEKPYECDKCGKAF 559

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UJW8|ZN180_HUMAN Zinc finger protein 180 OS=Homo sapiens GN=ZNF180 PE=1 SV=2

 Score =  142 bits (359), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 168/382 (43%), Gaps = 58/382 (15%)

Query: 28  IQVHLRLHSGERRFPCEYCSLLVYPVLI---LFRFIFVCTQG--SADSHKHHLKDHVNKI 82
           + +H ++H G + F  + C  ++ P +      R  F  +Q   S  SH   L  ++ + 
Sbjct: 288 LHIHEKIHGGGKTFDFKECGQVLNPKISHNEQQRIPFEESQYKCSETSHSSSLTQNM-RN 346

Query: 83  HLHPKTFSCNSCGQTWLGYTSWKQH-VAACREKRRKETFPCKRCDERFSTRDGLESFTFS 141
           +   K F CN CG+++    SW  H VA  R    ++ + C  C + FS           
Sbjct: 347 NSEEKPFECNQCGKSF----SWSSHLVAHQRTHTGEKPYECSECGKSFSRSS-------- 394

Query: 142 LRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM 199
                      L+SH   H GE + Y CN  QC + F  + +L  H  TH  +  Y C+ 
Sbjct: 395 ----------HLVSHQRTHTGE-KPYRCN--QCGKSFSQSYVLVVHQRTHTGEKPYECNQ 441

Query: 200 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR 259
           CG  F    +L  H  R HTG   Y C QC   F  +Y+L  H R HT E+P+ C  C +
Sbjct: 442 CGKSFRQSYKLIAH-QRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPYECNQCGK 500

Query: 260 TFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHV 319
           +F +                   +L++H   H GE + + CN  QC + F  +S L  H 
Sbjct: 501 SFSQS-----------------YKLVAHQRTHTGE-KPFECN--QCGKSFSWSSQLVAHQ 540

Query: 320 STHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQH 377
            TH  +  Y C  CG  F     L  H  R+HTG   Y C QC   F  +Y L  H R H
Sbjct: 541 RTHTGEKPYECSECGKSFNRSSHLVMH-QRIHTGEKPYECNQCGKSFSQSYVLVVHQRTH 599

Query: 378 TDERPFPCPVCQRTFRRKVCTT 399
           T E+P+ C  C ++FR+  C T
Sbjct: 600 TGEKPYECSQCGKSFRQSSCLT 621

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q86UE3|ZN546_HUMAN Zinc finger protein 546 OS=Homo sapiens GN=ZNF546 PE=2 SV=2

 Score =  142 bits (357), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 162/381 (42%), Gaps = 68/381 (17%)

Query: 31  HLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFS 90
           H R+H+GER + C+ C                   G     + H+  H  KIH   K + 
Sbjct: 347 HQRIHTGERPYECKVC-------------------GKTFRVQRHISQH-QKIHTGVKPYK 386

Query: 91  CNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFP 150
           CN CG+ +   +   QH         ++ + CK C + FS                  F 
Sbjct: 387 CNECGKAFSHGSYLVQHQKI---HTGEKPYECKECGKSFS------------------FH 425

Query: 151 QELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKR 208
            EL  H   H GE + Y C   +C + F   + L RH  TH  +  Y C  CG  F C  
Sbjct: 426 AELARHRRIHTGE-KPYECR--ECGKAFRLQTELTRHHRTHTGEKPYECKECGKAFICGY 482

Query: 209 RLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLES 268
           +LT HL R HTG + Y C +C   F S Y L QH R HT E+P+ C  C + FR +G   
Sbjct: 483 QLTLHL-RTHTGEIPYECKECGKTFSSRYHLTQHYRIHTGEKPYICNECGKAFRLQG--E 539

Query: 269 FTFSLRLFCLYFPQE-------------LISHSSYHGGEERRYVCNHMQCTRRFHSASLL 315
            T   R+     P E              ISH   H  E   Y+C   +C + F     L
Sbjct: 540 LTRHHRIHTCEKPYECKECGKAFIHSNQFISHQRIHTSES-TYICK--ECGKIFSRRYNL 596

Query: 316 ARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH 373
            +H   H  +  Y C+ CG  F  +  LTQH  R+HTG   Y CT+C   F  +  L QH
Sbjct: 597 TQHFKIHTGEKPYICNECGKAFRFQTELTQH-HRIHTGEKPYKCTECGKAFIRSTHLTQH 655

Query: 374 VRQHTDERPFPCPVCQRTFRR 394
            R HT E+P+ C  C +TF R
Sbjct: 656 HRIHTGEKPYECTECGKTFSR 676

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q3SYV7|ZN345_BOVIN Zinc finger protein 345 OS=Bos taurus GN=ZNF345 PE=2 SV=1

 Score =  139 bits (351), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 175/432 (40%), Gaps = 82/432 (18%)

Query: 12  LMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQ------ 65
           L  MI T   +P   F   H R+H+ E+   C+ C      V +L R   + T       
Sbjct: 35  LSQMIFTPEDMP--TFNTQHQRIHTDEKLLECKECGKDFSFVSVLIRHQRIHTGEKPYEC 92

Query: 66  ---GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPC 122
              G A     +L  H  +IH   K + CN CG+ +   ++   H    R    ++ + C
Sbjct: 93  KECGKAFGSGANLAYH-QRIHTGEKPYECNECGKAFGSGSNLTHHQ---RIHTGEKPYEC 148

Query: 123 KRCDERFSTRDGL-------------------ESFTFSL------RLFCLYFPQE----- 152
           K C + FS   GL                   +SF+F        R+     P E     
Sbjct: 149 KECGKAFSFGSGLIRHQIIHSGEKPYECKVCGKSFSFESALTRHHRIHTGEKPYECKDCG 208

Query: 153 --------LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGH 202
                   L  H   H GE + Y C    C   F S S L RH   H  +  Y C+ CG 
Sbjct: 209 KAFGSGSNLTQHRRVHTGE-KPYECK--GCGMAFSSGSALTRHQRIHTGEKPYICNECGK 265

Query: 203 MFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFR 262
            F+    LT+H  R+HTG   Y C +C   F S  +L QH R HT E+P+ C  C++ FR
Sbjct: 266 AFSFGSALTRH-QRIHTGEKPYVCKECGKAFNSGSDLTQHQRIHTGEKPYECKECEKAFR 324

Query: 263 RKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH 322
                               +LI H   H G E+ Y C   +C + F S S L +H   H
Sbjct: 325 S-----------------GSKLIQHQRMHTG-EKPYECK--ECGKAFSSGSDLTQHQRIH 364

Query: 323 AIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE 380
             +  Y C  CG  F    +L QH   +HTG   Y C +C   F S   L +H R HT +
Sbjct: 365 TGEKPYECKECGKAFASGSKLIQHQL-IHTGEKPYECRECRKSFSSGSALNRHQRIHTGQ 423

Query: 381 RPFPCPVCQRTF 392
           +P+ C  C++TF
Sbjct: 424 KPYECKECEKTF 435

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q99676|ZN184_HUMAN Zinc finger protein 184 OS=Homo sapiens GN=ZNF184 PE=1 SV=4

 Score =  138 bits (348), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 167/386 (43%), Gaps = 54/386 (13%)

Query: 31  HLRLHSGERRFPCEYCS--------LLVYPVLILFRFIFVCTQ-GSADSHKHHLKDHVNK 81
           H R+H+GE+ + C+ C         L+ +  +      + C + G A S + H  +H  K
Sbjct: 296 HQRIHTGEKPYKCDECGKAFSQRTHLVQHQRIHTGEKPYTCNECGKAFSQRGHFMEH-QK 354

Query: 82  IHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFS 141
           IH   K F C+ C +T+   T   QH         ++T+ C  C + F+           
Sbjct: 355 IHTGEKPFKCDECDKTFTRSTHLTQHQKI---HTGEKTYKCNECGKAFNG---------- 401

Query: 142 LRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM 199
                   P   I H   H GE + Y CN  +C + F   S L +H  TH  +  Y C  
Sbjct: 402 --------PSTFIRHHMIHTGE-KPYECN--ECGKAFSQHSNLTQHQKTHTGEKPYDCAE 450

Query: 200 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR 259
           CG  F+    L QHL ++HTG   Y C +C   F     L QH R HT E+PF C  C +
Sbjct: 451 CGKSFSYWSSLAQHL-KIHTGEKPYKCNECGKAFSYCSSLTQHRRIHTREKPFECSECGK 509

Query: 260 TF---------RRKGLESFTFSLRLFCLYF--PQELISHSSYHGGEERRYVCNHMQCTRR 308
            F         ++   +   +  +     F     L  H   H GE + Y C+  +C + 
Sbjct: 510 AFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTGE-KPYQCH--ECGKT 566

Query: 309 FHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYS 366
           F   S L +H   H  +  Y C+ CG  F     LTQH  R+HTG+  Y C +C   F  
Sbjct: 567 FSYGSSLIQHRKIHTGERPYKCNECGRAFNQNIHLTQH-KRIHTGAKPYECAECGKAFRH 625

Query: 367 AYELRQHVRQHTDERPFPCPVCQRTF 392
              L QH + HT+E+P+ C  C++TF
Sbjct: 626 CSSLAQHQKTHTEEKPYQCNKCEKTF 651

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q14585|ZN345_HUMAN Zinc finger protein 345 OS=Homo sapiens GN=ZNF345 PE=2 SV=1

 Score =  137 bits (345), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 162/377 (42%), Gaps = 60/377 (15%)

Query: 31  HLRLHSGERRFPCEYCS--------LLVYPVLILFRFIFVCTQ-GSADSHKHHLKDHVNK 81
           H R+H+GE+ + C+ C         L+ + ++      + C + G + S +  L  H ++
Sbjct: 136 HQRIHTGEKPYECKECGKAFSFGSGLIRHQIIHSGEKPYECKECGKSFSFESALIRH-HR 194

Query: 82  IHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFS 141
           IH   K + C  CG+ +   ++  QH    R    ++ + CK C   FS+   L      
Sbjct: 195 IHTGEKPYECIDCGKAFGSGSNLTQHR---RIHTGEKPYECKACGMAFSSGSAL------ 245

Query: 142 LRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM 199
                         H   H GE + Y+CN  +C + F   S L RH   H  +  Y C  
Sbjct: 246 ------------TRHQRIHTGE-KPYICN--ECGKAFSFGSALTRHQRIHTGEKPYVCKE 290

Query: 200 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR 259
           CG  F     LTQH  R+HTG   Y C +C   F S  +L QH R HT E+P+ C  C +
Sbjct: 291 CGKAFNSGSDLTQH-QRIHTGEKPYECKECEKAFRSGSKLIQHQRMHTGEKPYECKECGK 349

Query: 260 TFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHV 319
           TF                     +L  H   H GE + Y C   +C + F S S L +H 
Sbjct: 350 TFSS-----------------GSDLTQHHRIHTGE-KPYECK--ECGKAFGSGSKLIQHQ 389

Query: 320 STHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQH 377
             H  +  Y C  CG  F+    L +H  R+HTG   Y C +C   FYS   L QH R H
Sbjct: 390 LIHTGERPYECKECGKSFSSGSALNRH-QRIHTGEKPYECKECGKAFYSGSSLTQHQRIH 448

Query: 378 TDERPFPCPVCQRTFRR 394
           T E+ + C  C + + R
Sbjct: 449 TGEKLYECKNCGKAYGR 465

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
326680667	1782	PREDICTED: zinc finger protein 729-like	0.795	0.182	0.321	2e-36
326667171	681	PREDICTED: zinc finger protein 850-like	0.880	0.530	0.304	4e-36
326680774	1307	PREDICTED: zinc finger protein 729-like	0.841	0.263	0.310	5e-36
326666730	1718	PREDICTED: zinc finger protein 729 [Dani	0.814	0.194	0.315	6e-36
326668041	1077	PREDICTED: zinc finger protein 729-like	0.882	0.336	0.305	7e-36
326666712	367	PREDICTED: zinc finger protein 429-like	0.775	0.866	0.306	1e-35
326667012	539	PREDICTED: zinc finger protein 271-like	0.875	0.666	0.298	2e-35
326667061	433	PREDICTED: zinc finger protein 135-like	0.782	0.741	0.301	4e-35
326667110	1395	PREDICTED: zinc finger protein 729-like,	0.880	0.258	0.292	8e-35
326666903	573	PREDICTED: zinc finger protein 252-like	0.875	0.626	0.298	9e-35

>gi|326680667|ref|XP_003201586.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 176/386 (45%), Gaps = 60/386 (15%)

Query: 21   SLPCVDFIQVHLRLHSGERRFPCEYC--SLLVYPVLILFRFI------FVCTQ-GSADSH 71
            S  C   +  H+R+H+GE+ F C  C  S +    L L   I      F CTQ G + S 
Sbjct: 1135 SFSCSSHLNKHIRIHTGEKPFTCTQCGKSFIQSSQLNLHMRIHTGEKPFTCTQCGKSFSR 1194

Query: 72   KHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFST 131
              HL  H+ +IH   K FSC  CG++    +S KQH+   R    ++ F C +C + F  
Sbjct: 1195 SSHLNYHM-RIHTGEKPFSCTQCGKSLRRSSSLKQHM---RIHTGEKPFTCTQCGKSFRR 1250

Query: 132  RDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH 191
                                 L  H   H G E+ + C   QC + F  +S L  H+ +H
Sbjct: 1251 SS------------------HLNQHMRIHTG-EKPFSC--TQCGKSFSQSSSLNLHMMSH 1289

Query: 192  AIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE 249
              +  +TC  CG  F C   L QH+ R+HTG   + CTQC   F  +  L  H+R HT E
Sbjct: 1290 TGEKPFTCTQCGKTFNCSSHLNQHM-RIHTGEKPFTCTQCGKSFSQSSNLNLHMRIHTRE 1348

Query: 250  RPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRF 309
            +PF C  C ++F                      L  H   H G E+ + C+  QC + F
Sbjct: 1349 KPFQCTQCGKSFSH-----------------SSSLNQHMRIHTG-EKPFTCS--QCGKSF 1388

Query: 310  HSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSA 367
            +  SLL +H+  H  +  +TC  CG  F+    L QH+ R+HTG   + CTQC   F  +
Sbjct: 1389 NCLSLLNKHMKIHTGEKPFTCTQCGKSFSQSTSLNQHM-RIHTGEKPFTCTQCGKSFSQS 1447

Query: 368  YELRQHVRQHTDERPFPCPVCQRTFR 393
              L QH++ HT E+PF C  C ++F 
Sbjct: 1448 SSLNQHMKIHTGEKPFTCTQCGKSFN 1473

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667171|ref|XP_003198510.1| PREDICTED: zinc finger protein 850-like [Danio rerio]

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 189/417 (45%), Gaps = 56/417 (13%)

Query: 2   IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFI- 60
           +RIH G            YS   +  + +H+R+H+GE+ F C  C      +  L   + 
Sbjct: 113 MRIHTGEKPYTCTQCGKSYSQ--LSSLNLHMRIHTGEKPFTCTQCGKSFSLLSSLNLHMR 170

Query: 61  -------FVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
                  F CTQ G + S   +L  H+ KIH   K F+C  CG+++   +   +H+   R
Sbjct: 171 IHTGEKPFTCTQCGKSFSLSSNLNKHM-KIHTGEKPFTCPQCGKSFSQSSHLNKHM---R 226

Query: 113 EKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 172
               ++ F C +C + FS    L                    H   H GE + Y C   
Sbjct: 227 IHTGEKPFTCPQCGKSFSQSSHLNK------------------HMRIHTGE-KPYTC--P 265

Query: 173 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 230
           QC + F  +S L +H+  H  +  +T + CG  F C   L QH+ R+HTG   + CTQC 
Sbjct: 266 QCGKSFSQSSYLNKHMRIHTGEKPFTSNQCGKNFYCSSNLNQHM-RIHTGEKLFTCTQCG 324

Query: 231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK-----------GLESFTFSLRLFCLY 279
             F ++  L QH+R HT E+PF C  C ++F +            G + FT S       
Sbjct: 325 KSFSNSTNLNQHMRIHTGEKPFTCTQCGKSFSQSSNLNHHMRIHTGEKPFTCSQCGKSFS 384

Query: 280 FPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTC 337
               L  H   H G E+ + C   QC + F  +S+L  H+  H  +  +TC  CG  F+ 
Sbjct: 385 QSSSLNLHMMIHTG-EKPFTC--TQCGKSFSQSSILNIHMRNHTGEKPFTCLQCGKSFSQ 441

Query: 338 KRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
              L QH+ R+HTG   + CTQC   F ++  L QH+R HT E+PF C  C ++F +
Sbjct: 442 STSLNQHM-RIHTGEKLFTCTQCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQ 497

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326680774|ref|XP_002661688.2| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 177/399 (44%), Gaps = 54/399 (13%)

Query: 21  SLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFI--------FVCTQ-GSADSH 71
           S  C   +  H+R+H+GE+ F C  C         L R +        F CTQ G + +H
Sbjct: 102 SFNCSSDLYKHMRIHTGEKPFTCTQCEKSFNFSSNLRRHMRSHTGEKPFTCTQCGKSYNH 161

Query: 72  KHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFST 131
             HL  H+  IH   K F C  CG+++   +S  QH+   R    ++ F C +C + F  
Sbjct: 162 ISHLNQHM-MIHTGEKPFKCTQCGKSFSQSSSLNQHM---RIHTGEKPFQCTQCRKSFKI 217

Query: 132 RDGL----------ESFTFSLRLFCLYFPQELISHSSYHGGE---ERRYVCNHMQCTRRF 178
              L          + FT             L  H   H GE   E  + C   QC + F
Sbjct: 218 SSNLYRHMRIHTGEKPFTCPQCGKSFSQSSHLNKHIMSHTGEKPDENCFTC--TQCGKSF 275

Query: 179 HSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSA 236
             +S L  H+ +H  +  +TC  CG  F C   L QH+ R+HTG   + CTQC   F  +
Sbjct: 276 SQSSSLNLHMMSHTGEKPFTCTQCGKTFNCSSHLNQHM-RIHTGEKPFTCTQCGKSFSQS 334

Query: 237 YELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEER 296
             L  H+R HT E+PF C  C ++F                      L  H   H GE +
Sbjct: 335 SNLNLHMRIHTGEKPFQCTQCGKSFSHSS-----------------SLNQHMRIHTGE-K 376

Query: 297 RYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLS 354
            + C+  QC + F+  SLL +H+  H  +  +TC  CG  F+    L QH+ R+HTG   
Sbjct: 377 PFTCS--QCGKSFNCLSLLNKHMKIHTGEKPFTCTQCGKSFSQSTSLNQHV-RIHTGEKP 433

Query: 355 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFR 393
           + CTQC   F  +  L QH++ HT E+PF C  C ++F 
Sbjct: 434 FTCTQCGKSFSQSSSLNQHMKIHTGEKPFTCTQCGKSFN 472

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666730|ref|XP_003198356.1| PREDICTED: zinc finger protein 729 [Danio rerio]

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 178/390 (45%), Gaps = 56/390 (14%)

Query: 28  IQVHLRLHSGERRFPCEYCS--------LLVYPVLILFRFIFVCTQ-GSADSHKHHLKDH 78
           + VH+R+H+GE+   CE C         L ++  +      + CT+ G +  H   LK H
Sbjct: 321 LDVHMRVHTGEKPHTCEQCGKSFGQKQDLYIHMRIHTGEKPYTCTECGKSFPHISTLKHH 380

Query: 79  VNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFS-------- 130
           + +IH   K F+C  CG+++   TS K H+        ++ F C +C + F         
Sbjct: 381 M-RIHTGEKPFACAQCGKSFTTKTSLKNHMMI---HTGEKPFTCTQCGKSFDCSSHLNRH 436

Query: 131 --TRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHV 188
                G + F  +           L  H   H GE + + C   QC + F+ +S L RH+
Sbjct: 437 MRIHTGEKPFACTQCGKSFNCSSHLNQHMMIHTGE-KPFTCT--QCRKSFYCSSHLNRHM 493

Query: 189 STHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQH 246
             H  +  + C  CG  FTC   L QH+  +HTG   + CTQC   F  +  L QHVR H
Sbjct: 494 RIHTGEKPFACTQCGKSFTCSSHLNQHMM-IHTGEKPFTCTQCGKSFSQSSSLNQHVRIH 552

Query: 247 TDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCT 306
           T E+PF C  C ++F R               +F   L  H   H GE+        QC 
Sbjct: 553 TGEKPFTCTQCGKSFYRS--------------FF---LNQHMRIHTGEK-------PQCG 588

Query: 307 RRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKF 364
           + F  +S L RH+  H  +  +TC  CG  F C   L QH+ R+HTG   + CTQC   F
Sbjct: 589 KSFSQSSHLNRHMRIHTGEKPFTCTQCGKSFNCSSNLIQHM-RIHTGEKPFTCTQCGKSF 647

Query: 365 YSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
             +  L QH+R HT E+PF C  C ++F +
Sbjct: 648 SQSSSLNQHMRIHTGEKPFTCTQCGKSFSQ 677

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326668041|ref|XP_003198717.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 183/416 (43%), Gaps = 54/416 (12%)

Query: 2   IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCS--------LLVYPV 53
            RIH G            +S      +  H+ +H+GE+ F C  C         L  +  
Sbjct: 170 TRIHTGEKPFTCTQCGKSFSQS--SHLNEHMMIHTGEKPFTCTLCGKSFGRNFDLKTHMT 227

Query: 54  LILFRFIFVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
           +      F CTQ G +   K  LK H+ +IH   K FSC  CG+ +   +   +H     
Sbjct: 228 IHTGENTFTCTQCGKSSGRKWDLKIHM-RIHTGEKLFSCTQCGKGFTLSSHLNRHKKI-- 284

Query: 113 EKRRKETFPCKRCDERFS--------TR--DGLESFTFSLRLFCLYFPQELISHSSYHGG 162
              R++ F C +C + F+        TR   G + FT +           L  H   H G
Sbjct: 285 -HTREKPFTCTQCGKTFNYSSCLNEHTRIHTGEKPFTCTQCGKSFSRSSHLNEHMMIHTG 343

Query: 163 EERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTG 220
           E + + C   QC + F  +S L RH   H  +  +TC  CG  F C   L +H+ R+HTG
Sbjct: 344 E-KPFTCT--QCGKGFTLSSHLNRHKKIHTREKPFTCTQCGKTFNCSSHLNKHM-RVHTG 399

Query: 221 SLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYF 280
              + CTQC   F   ++L+ H+R HT E+PF C +C ++F R                 
Sbjct: 400 EKPFTCTQCGKSFGRKWDLKIHMRIHTGEKPFTCTLCGKSFSR----------------- 442

Query: 281 PQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCK 338
              L  H   H G ER + C   QC + F  +S L RH+  H  +  +TC  CG  F C 
Sbjct: 443 SSHLNEHMKMHTG-ERPFTCT--QCGKSFSGSSHLNRHMMIHTGEKPFTCTQCGKSFNCS 499

Query: 339 RRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
             L QH+ R+HTG   + CTQC   F  +  L +H+  HT E+PF C  C ++F +
Sbjct: 500 SHLNQHI-RIHTGEKPFRCTQCGKSFNCSSHLNEHMMIHTGEKPFTCTQCGKSFSK 554

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666712|ref|XP_003198347.1| PREDICTED: zinc finger protein 429-like [Danio rerio]

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 170/378 (44%), Gaps = 60/378 (15%)

Query: 28  IQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFV--------CTQGSAD-SHKHHLKDH 78
           + +H+R+H+GE+ F C  C         L + + +        CTQ     S+  HL  H
Sbjct: 23  LNLHMRIHTGEKPFTCTQCGKSFSQSSTLNKHMMIHTGEKPYTCTQCEKSFSYSSHLYLH 82

Query: 79  VNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESF 138
           + +IH   K F+C  CG+++   +S  QH+   R    ++ F C +C + FS    L   
Sbjct: 83  I-RIHTGEKPFACTLCGKSFSCSSSLNQHI---RIHTGEKPFTCTQCGKSFSRSSSLNQ- 137

Query: 139 TFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YT 196
                            H   H GE + + C   QC + F+  S L  H+  H  +  +T
Sbjct: 138 -----------------HIKIHTGE-KPFTC--TQCGKSFNQPSHLNNHMKIHTGEKPFT 177

Query: 197 CHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV 256
           C  CG  F     L  H  ++H G  S+ CTQC   F  + +L +H+R HT E+PF C  
Sbjct: 178 CTQCGKSFNQSSHLNSH-KKIHAGERSFTCTQCGKSFRQSSQLNEHMRNHTGEKPFTCVQ 236

Query: 257 CQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLA 316
           C ++F                  F   L  H   H GE R + C   QC + F  +S   
Sbjct: 237 CGKSFN-----------------FSSNLYQHMMIHTGE-RPFTC--TQCGKSFSQSSHFN 276

Query: 317 RHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHV 374
           +H+  H  +  +TC  CG  F C   L  H+ R+HTG  S+ CTQC   F  +  L QH+
Sbjct: 277 QHMRNHTGEKPFTCTQCGKSFNCSSYLNIHI-RIHTGEKSFTCTQCGKSFNFSSNLHQHM 335

Query: 375 RQHTDERPFPCPVCQRTF 392
           R HT E+PF CP C ++F
Sbjct: 336 RIHTGEKPFTCPQCGKSF 353

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667012|ref|XP_003198451.1| PREDICTED: zinc finger protein 271-like [Danio rerio]

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 190/419 (45%), Gaps = 60/419 (14%)

Query: 2   IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFI- 60
           +RIH G             S  C  +++ H+R+H+GE+ F C  C         L   + 
Sbjct: 36  MRIHTGEKPFTCTQCG--ISFNCSSYLKQHMRIHTGEKPFTCTQCGKSFNRSSNLDHHMR 93

Query: 61  -------FVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
                  F CTQ G + +   +L  H+ +IH   K  +C  CG+++   +S  +H+   R
Sbjct: 94  IHTGEKPFTCTQCGKSFNRSSNLDQHI-RIHTGEKPITCTLCGKSFRQSSSLSKHM---R 149

Query: 113 EKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 172
               ++ F C +C + FS     +S  F+L             H   H GE + + C   
Sbjct: 150 THTGEKPFTCTQCGKSFS-----QSSNFNL-------------HMRIHTGE-KPFTC--T 188

Query: 173 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 230
           QC + F  AS L +H+ TH  +  +TC  CG  F     L QH+ R+HTG     CTQC 
Sbjct: 189 QCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSHLNQHI-RIHTGEKPITCTQCG 247

Query: 231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFP--------- 281
             F+ +  L +H+R HT E+PF C  C ++F +    +F   +R+     P         
Sbjct: 248 KSFHQSSSLYKHMRIHTGEKPFTCTQCGKSFSQS--SNFNLHMRIHTGEKPITCTQCGKS 305

Query: 282 ----QELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMF 335
                 L  H   H GE + + C   QC   F+ +S L +H+  H  +  +TC  CG  F
Sbjct: 306 FRQTSSLNKHLRIHTGE-KPFTC--TQCGISFNCSSYLKQHMRIHTGEKPFTCTQCGRSF 362

Query: 336 TCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
                L  H+ R+HTG   + CTQC   F  +  L QH+R HT E+P  C +C ++FR+
Sbjct: 363 NRSSNLDHHM-RIHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPITCTLCGKSFRQ 420

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667061|ref|XP_003198472.1| PREDICTED: zinc finger protein 135-like [Danio rerio]

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 179/385 (46%), Gaps = 64/385 (16%)

Query: 25  VDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHL 84
           +  +  H ++H+GE+ + C  C                   G + S   +   H+ +IH 
Sbjct: 58  ISALSKHKKIHTGEKPYTCTQC-------------------GKSFSQSSNFNLHM-RIHT 97

Query: 85  HPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRL 144
             K FSC+ CG+++   + +KQH+   R    ++ F C +C + FS     +S  F+L  
Sbjct: 98  GEKPFSCSQCGKSFNCSSHFKQHM---RIHTGEKPFTCTQCGKSFS-----QSSNFNL-- 147

Query: 145 FCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGH 202
                      H   H G ++ + C   QC + F  +S L  H+  H  +  +TC  CG 
Sbjct: 148 -----------HMRIHTG-QKPFTC--TQCGKSFSQSSSLNLHMRIHTGEKPFTCTQCGK 193

Query: 203 MFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFR 262
            F C   L QH+ R+HTG  S+ CTQC   F  +  L QH++ HT E+PF C  C+++F 
Sbjct: 194 SFNCSSHLNQHM-RIHTGEKSFTCTQCGKSFSQSSNLNQHMKIHTGEKPFTCTQCRKSFS 252

Query: 263 RK-----------GLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHS 311
           +            G + FT +           L  H   H G E+ + C   QC + F  
Sbjct: 253 QSSSLNDHMKIHTGEKPFTCTQCGKSFNRSSNLNKHMRIHTG-EKPFTC--TQCGKSFSQ 309

Query: 312 ASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYE 369
           +S L +H+  H  +  +TC  CG  F C   L QH+ R+HTG  S+ CTQC   F  +  
Sbjct: 310 SSSLYQHMRIHTGEKPFTCTQCGKSFNCSSHLNQHM-RIHTGEKSFTCTQCGKSFSQSSN 368

Query: 370 LRQHVRQHTDERPFPCPVCQRTFRR 394
           L +H+R HT E+PF C  C ++F +
Sbjct: 369 LNKHMRIHTGEKPFTCTQCGKSFSQ 393

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667110|ref|XP_003198489.1| PREDICTED: zinc finger protein 729-like, partial [Danio rerio]

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 192/437 (43%), Gaps = 76/437 (17%)

Query: 21  SLPCVDFIQVHLRLHSGERRFPCEYC--------SLLVYPVLILFRFIFVCTQ-GSADSH 71
           S  C   +  H+R+H+GE+ F C  C        SL  + ++   +  F CTQ G + S 
Sbjct: 326 SFNCSSSLNKHMRIHTGEKPFTCTQCGKSFSQSSSLNQHIMIHTGKKPFTCTQCGKSFSQ 385

Query: 72  KHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFST 131
             +LK+H+ KIH   K + C  C +T++     K+H    R    ++ + C  C +RF+ 
Sbjct: 386 SSYLKNHM-KIHTSVKEYVCLECEKTFITAAELKRHQ---RIHTGEKPYKCSHCSKRFTQ 441

Query: 132 RDGLESF----TFSLRLFCLYFPQELISHSSY------HGGEERRYVCNHMQCTRRFHSA 181
              L++     T      C    +     S++      H GE + + C   QC + F  A
Sbjct: 442 LGTLKTHERIHTGDKPYKCTQCGKSFSQSSNFNLHMRIHTGE-KPFTCT--QCGKSFRQA 498

Query: 182 SLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYEL 239
           S L +H+ TH  +  +TC  CG  F     L QH+ R+HTG    PCTQC   F  +  L
Sbjct: 499 SSLNKHMRTHTGEKPFTCTQCGKSFNRSSTLNQHI-RIHTGEKPIPCTQCGKSFRQSSSL 557

Query: 240 RQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFP-------------QELIS 286
            +H+R HT E+PF C  C ++F +    +F   +R+     P               L  
Sbjct: 558 YKHMRIHTGEKPFTCTQCGKSFSQS--SNFNLHMRIHTGEKPIRCTQCGKSFHQSSSLYK 615

Query: 287 HSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQH 344
           H   H GE + + C   QC + F  AS L +H+  H  +  +TC  CG  F C   L QH
Sbjct: 616 HMRIHTGE-KPFTCT--QCGKSFRQASSLNKHMRIHTGEKPFTCTQCGISFNCSSYLKQH 672

Query: 345 L---------------------------ARLHTGSLSYPCTQCPGKFYSAYELRQHVRQH 377
           +                            R+HTG   + CTQC   F  +  L QH+R H
Sbjct: 673 MRIHTGEKPFTCTQCGRSFNRSSHLNHHMRIHTGEKPFTCTQCGKSFNRSSNLNQHIRIH 732

Query: 378 TDERPFPCPVCQRTFRR 394
           T E+P  C +C ++FR+
Sbjct: 733 TGEKPITCTLCGKSFRQ 749

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666903|ref|XP_003198412.1| PREDICTED: zinc finger protein 252-like [Danio rerio]

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 188/419 (44%), Gaps = 60/419 (14%)

Query: 2   IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFI- 60
           +RIH G             S  C  +++ H+R+H+GE+ F C  C      +  L   + 
Sbjct: 57  MRIHTGEKPFTCTQCG--ISFNCSSYLKQHMRIHTGEKPFTCTQCGRSFNRLSHLNHHMR 114

Query: 61  -------FVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
                  F CTQ   + +   HL  H+ +IH   K  +C  CG+++   +S  +H+   R
Sbjct: 115 IHTGEKPFTCTQCWKSFNRSSHLDQHI-RIHTGEKPITCTQCGKSFRQSSSLYKHM---R 170

Query: 113 EKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 172
               ++ F C +C + FS      SF   +R+     P                + C   
Sbjct: 171 IHTGEKPFTCTQCGKSFSQSS---SFNLHMRIHTGVKP----------------FTC--T 209

Query: 173 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 230
           QC + F  AS L +H+ TH  +  +TC  CG  F     L QH+ R+HTG     CTQC 
Sbjct: 210 QCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSTLNQHI-RIHTGEKPITCTQCG 268

Query: 231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRL-------FCLYFPQE 283
             F  A  L +H+R HT E+PF C  C ++F +    +F   +R+        C    + 
Sbjct: 269 KSFRQASSLNKHMRIHTGEKPFTCTQCGKSFSQS--SNFNLHMRIHTGEKPFTCTQCGKS 326

Query: 284 LISHSSY------HGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMF 335
            I  S++      H G E+ + C   QC + F  AS L +H+ TH  +  +TC  CG  F
Sbjct: 327 FIQSSNFNLHMRIHTG-EKPFTC--TQCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSF 383

Query: 336 TCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
               RL QH+ R+HT    + CT+C   F  +  L  H+R HT E+PF C  C ++F R
Sbjct: 384 NRSSRLDQHI-RIHTREKPFTCTECGRSFNRSSHLNHHMRIHTGEKPFTCTQCGKSFNR 441

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
ZFIN|ZDB-GENE-110913-173	819	si:dkey-78k22.1 "si:dkey-78k22	0.880	0.440	0.314	1.1e-45
ZFIN|ZDB-GENE-080215-12	600	zgc:173710 "zgc:173710" [Danio	0.846	0.578	0.327	1.3e-45
ZFIN|ZDB-GENE-110913-164	572	si:dkey-257e4.5 "si:dkey-257e4	0.875	0.627	0.305	1.6e-45
ZFIN|ZDB-GENE-110913-23	569	si:dkey-122c11.8 "si:dkey-122c	0.873	0.629	0.300	1.6e-45
ZFIN|ZDB-GENE-110913-176	797	si:dkey-238o14.5 "si:dkey-238o	0.473	0.243	0.358	9.5e-45
ZFIN|ZDB-GENE-071004-105	1014	zgc:173573 "zgc:173573" [Danio	0.824	0.333	0.314	1.1e-44
ZFIN|ZDB-GENE-110913-148	1029	si:dkey-14o6.6 "si:dkey-14o6.6	0.817	0.325	0.315	2.4e-44
ZFIN|ZDB-GENE-110913-160	846	si:dkey-29p23.3 "si:dkey-29p23	0.880	0.426	0.299	2.7e-44
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.821	0.341	0.305	2e-43
ZFIN|ZDB-GENE-110913-159	733	si:ch211-197f20.2 "si:ch211-19	0.880	0.492	0.302	2e-43

ZFIN|ZDB-GENE-110913-173 si:dkey-78k22.1 "si:dkey-78k22.1" [Danio rerio (taxid:7955)]

 Score = 486 (176.1 bits), Expect = 1.1e-45, P = 1.1e-45
 Identities = 131/417 (31%), Positives = 194/417 (46%)

Query:     2 IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYC-------SLLVYPVL 54
             +RIH G            ++  C  +++ H+R+H+GE+ F C  C       S L + + 
Sbjct:    73 MRIHTGEKPFTCTQCGISFN--CSSYLKQHMRIHTGEKPFTCTQCGKSFNRSSNLDHHMR 130

Query:    55 I-LFRFIFVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
             I      F CTQ G + +   +L  H+ +IH   K  +C  CG+++   +S  +H+   R
Sbjct:   131 IHTGEKPFTCTQCGKSFNRSSNLDQHI-RIHTGEKPITCTLCGKSFRQSSSLSKHM---R 186

Query:   113 EKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 172
                 ++ F C +C + FS     +S  F+L             H   H GE + + C   
Sbjct:   187 IHTGEKPFTCTQCGKSFS-----QSSNFNL-------------HMRIHTGE-KPFTCT-- 225

Query:   173 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 230
             QC + F  AS L +H+ TH  +  +TC  CG  F     L QH+ R+HTG     CTQC 
Sbjct:   226 QCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSHLNQHI-RIHTGEKPITCTQCG 284

Query:   231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG-----LESFTFSLRLFCLY----FP 281
               F  +  L +H+R HT E+PF C  C ++F +       +   T    + C      F 
Sbjct:   285 KSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPITCTQCGKSFH 344

Query:   282 QE--LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTC 337
             Q   L  H   H GE + + C   QC + FH AS L +H+  H  +   TC  CG  F  
Sbjct:   345 QSSSLYKHMRIHTGE-KPFTCT--QCGKSFHQASSLNKHMRIHTEEKPITCTQCGKSFRQ 401

Query:   338 KRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
                L +H+ R+HTG   + CTQC   F  +  L+QH+R HT E+PF C  C R+F R
Sbjct:   402 TSSLNKHM-RIHTGEKPFTCTQCGISFNCSSYLKQHMRIHTGEKPFTCTQCGRSFNR 457

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-080215-12 zgc:173710 "zgc:173710" [Danio rerio (taxid:7955)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 129/394 (32%), Positives = 170/394 (43%)

Query:    21 SLPCVDFIQVHLRLHSGERRFPCEYC--SLLVYPVLILFRFI------FVCTQ-GSADSH 71
             S  C   +  H R+H+GE+ F C  C  S      L L   I      F CTQ G + S 
Sbjct:    99 SFNCSSHLIQHTRIHTGEKPFTCTQCGKSFSHSSHLNLHMRIHTGEKPFTCTQCGKSFSQ 158

Query:    72 KHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFST 131
               HL  H+ +IH   K FSC  CG+++   +   QH+   R    ++ + C +C + FS 
Sbjct:   159 SSHLNLHM-RIHTGEKPFSCTICGKSFNCSSHRNQHM---RSHTGEKPYTCTQCGKSFSK 214

Query:   132 RDGL----ESFTFSLRLFCLYFPQEL--ISHSSYHGGEERRYVCNHMQCTRRFHSASLLA 185
                L    E FT      CL   +    ++H   H GE+    C   QC  RF     L 
Sbjct:   215 SSSLNKHVERFTLERPYKCLQCDKRFNHLTHLKTHTGEKPYRSCR--QCGNRFRRKHNLQ 272

Query:   186 RHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHV 243
              H+  H  +  YTC  CG  F     L  H+ RLHTG   Y C QC   F     L+ H+
Sbjct:   273 IHMRIHTGEKPYTCQQCGQCFCTSGNLVVHM-RLHTGEKPYSCPQCGKSFKHNGNLKVHM 331

Query:   244 RQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 303
             R HT ERP+ C  C +                 C Y    L +H   H GE R Y C   
Sbjct:   332 RTHTGERPYTCQQCGQ-----------------CFYTTGNLAAHMRIHTGE-RPYTCQ-- 371

Query:   304 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 361
             QC + F+ ++ LA H+  H  +  YTC  CG  F     L  H+ R+HTG   Y C QC 
Sbjct:   372 QCGKSFYQSANLAAHMRIHTGERPYTCQQCGKSFYQSANLVVHM-RIHTGERPYSCPQCG 430

Query:   362 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
               F     L  H+R H   R F CP C ++F +K
Sbjct:   431 KSFKQNSNLEAHIRTHNGGRSFTCPQCGKSFAQK 464

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110913-164 si:dkey-257e4.5 "si:dkey-257e4.5" [Danio rerio (taxid:7955)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 128/419 (30%), Positives = 196/419 (46%)

Query:     2 IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYC-------SLLVYPVL 54
             +RIH G            ++  C  +++ H+R+H+GE+ F C  C       S L + + 
Sbjct:   112 MRIHTGEKPFTCTQCGISFN--CSSYLKQHMRIHTGEKPFTCTQCGKSFNRSSNLDHHMR 169

Query:    55 I-LFRFIFVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
             I      F CTQ G + +   +L  H+ +IH   K  +C  CG+++   +S  +H+   R
Sbjct:   170 IHTGEKPFTCTQCGKSFNRSSNLDQHI-RIHTGEKPITCTLCGKSFRQSSSLSKHM---R 225

Query:   113 EKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 172
                 ++ F C +C + FS     +S  F+L             H   H GE + + C   
Sbjct:   226 THTGEKPFTCTQCGKSFS-----QSSNFNL-------------HMRIHTGE-KPFTCT-- 264

Query:   173 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 230
             QC + F  AS L +H+ TH  +  +TC  CG  F     L QH+ R+HTG     CTQC 
Sbjct:   265 QCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSHLNQHI-RIHTGEKPITCTQCG 323

Query:   231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLF-------CLY---- 279
               F+ +  L +H+R HT E+PF C  C ++F +    +F   +R+        C      
Sbjct:   324 KSFHQSSSLYKHMRIHTGEKPFTCTQCGKSFSQSS--NFNLHMRIHTGEKPITCTQCGKS 381

Query:   280 FPQ--ELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMF 335
             F Q   L  H   H GE + + C   QC   F+ +S L +H+  H  +  +TC  CG  F
Sbjct:   382 FRQTSSLNKHLRIHTGE-KPFTCT--QCGISFNCSSYLKQHMRIHTGEKPFTCTQCGRSF 438

Query:   336 TCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
                  L  H+ R+HTG   + CTQC   F  +  L QH+R HT E+P  C +C ++FR+
Sbjct:   439 NRSSNLDHHM-RIHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPITCTLCGKSFRQ 496

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-23 si:dkey-122c11.8 "si:dkey-122c11.8" [Danio rerio (taxid:7955)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 125/416 (30%), Positives = 186/416 (44%)

Query:     4 IHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFI--- 60
             IH G         +  +S  C   +  H+ +H+GE+ F C  C       L L + +   
Sbjct:    48 IHTGEKPFTCSQCVKSFS--CSSHLNKHMMIHTGEKPFSCTQCGKSFRHSLFLKQHMMIH 105

Query:    61 -----FVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREK 114
                  F CTQ G + S    L  H+ +IH   K F+C  CG++++  +   +H+      
Sbjct:   106 TGEKPFTCTQCGKSFSQSSSLNHHM-RIHTGEKPFTCTQCGKSFIQSSQLNRHIMI---H 161

Query:   115 RRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQC 174
               ++ F C +C + FS     +S  F+L             H   H GE + Y C H  C
Sbjct:   162 TGEKPFTCTQCGKSFS-----QSSNFNL-------------HMMIHTGE-KPYTCTH--C 200

Query:   175 TRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK 232
              + F  +S L  H++ H+ +  +TC  C   F+C   L  H+ R+HTG   + CTQC  +
Sbjct:   201 GKSFSKSSSLNEHMTIHSGEKPFTCTQCRKSFSCSSHLNHHM-RIHTGEKPFTCTQCGNR 259

Query:   233 FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLF-------CLY----FP 281
             F  +  L QH+  HT E+PF C  C ++F +    S    +R+        C      F 
Sbjct:   260 FSRSSNLNQHMMIHTGEKPFTCTQCGKSFSQSS--SLNHHMRIHTGEKPFTCTQCGKSFI 317

Query:   282 Q--ELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTC 337
             Q  +L  H   H GE + + C   QC + F     L  H+  H  +  YTC  CG  F  
Sbjct:   318 QSSQLNRHMRIHTGE-KPFTCTCKQCGKSFSQKPKLDVHIRDHTREKAYTCKQCGKSFYN 376

Query:   338 KRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFR 393
              R LT H+ R+HTG   Y C QC   F+    L  H+R HT ERP+ C  C ++F+
Sbjct:   377 TRNLTVHM-RIHTGERPYTCQQCGKSFHKTGNLTVHLRIHTGERPYTCQQCGKSFQ 431

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-176 si:dkey-238o14.5 "si:dkey-238o14.5" [Danio rerio (taxid:7955)]

 Score = 355 (130.0 bits), Expect = 9.5e-45, Sum P(2) = 9.5e-45
 Identities = 76/212 (35%), Positives = 106/212 (50%)

Query:   194 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFP 253
             ++TC  CG  F C   L +H+ R+HTG   + CTQC   F  +  L +H+R HT E+PF 
Sbjct:   477 RFTCTQCGKSFNCSSSLNRHM-RIHTGEKPFTCTQCGKSFNCSSSLNRHMRIHTGEKPFT 535

Query:   254 CPVCQRTFR-----RKGLESFTFSLRLFCLY----FPQE--LISHSSYHGGEERRYVCNH 302
             C  C ++F       + +   T      C      F Q   L  H   H  EER + C  
Sbjct:   536 CTQCGKSFNCSSSLNRHMMIHTGEKPFTCTQCGKSFSQSSHLDKHMRIHT-EERPFTCT- 593

Query:   303 MQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQC 360
              QC + F  +S L  H+  H  +  +TC  CG  F+    L QH+ R+HTG   + CTQC
Sbjct:   594 -QCGKSFIRSSYLNLHMRIHTGEKPFTCTQCGRSFSQSSHLNQHM-RIHTGEKPFACTQC 651

Query:   361 PGKFYSAYELRQHVRQHTDERPFPCPVCQRTF 392
                FY ++ L +H+R HT E+PF CP C + F
Sbjct:   652 RKSFYCSFSLSRHMRIHTGEKPFTCPQCGKNF 683

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-071004-105 zgc:173573 "zgc:173573" [Danio rerio (taxid:7955)]

 Score = 480 (174.0 bits), Expect = 1.1e-44, P = 1.1e-44
 Identities = 123/391 (31%), Positives = 182/391 (46%)

Query:    28 IQVHLRLHSGERRFPCEYCSLLVYPVLILFRFI--------FVCTQ-GSADSHKHHLKDH 78
             +  H+R+H+GE+ F C  C         L + +        F CT+ G + S   HL DH
Sbjct:   469 LYAHMRIHTGEKPFTCTQCGKRFSQSSHLIKHMRIHTGEKPFPCTRCGKSFSRSSHLNDH 528

Query:    79 VNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESF 138
             + KIH   K + C  C +T++     KQH    R    ++ + C  C++RF    GL + 
Sbjct:   529 M-KIHTGVKEYMCFECDKTFIKAGELKQHQ---RVHTGEKPYECSHCNKRFG---GLGT- 580

Query:   139 TFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YT 196
                           L  H   H GE + Y C+   C +RF+    L +HV TH  +  Y 
Sbjct:   581 --------------LKKHERIHTGE-KPYECS--LCNKRFNCTGTLKKHVRTHTGEKPYE 623

Query:   197 CHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV 256
             C  C   F+C   LT+H  R+HTG   Y CTQC   F  + ++ +H+R HT E+PF C  
Sbjct:   624 CSHCNKRFSCSGTLTKHHMRIHTGEKPYMCTQCGKSFSQSSDVNKHMRIHTGEKPFTCTQ 683

Query:   257 CQRTFRRKG-----LESFTFSLRLFCLY----FPQ--ELISHSSYHGGEERRYVCNHMQC 305
             C ++F         ++  T      C      F Q  ++I H   H GE + + C   QC
Sbjct:   684 CGKSFSHASTLNQHMKIHTGEKPYMCTQCGKGFNQSSDVIKHMRSHTGE-KPFTCT--QC 740

Query:   306 TRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK 363
              + F  +S L +H+ +H  +  YTC  CG  F+    +T+H+   HTG   + CTQC   
Sbjct:   741 GKSFSQSSNLNKHMWSHTGERPYTCTQCGKSFSQSSDVTKHMWS-HTGEKPFTCTQCGKS 799

Query:   364 FYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
             F  +  L +H   HT E+PF C  C ++FRR
Sbjct:   800 FSHSSNLNKHTMIHTGEKPFTCTQCGKSFRR 830

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110913-148 si:dkey-14o6.6 "si:dkey-14o6.6" [Danio rerio (taxid:7955)]

 Score = 477 (173.0 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 123/390 (31%), Positives = 185/390 (47%)

Query:    28 IQVHLRLHSGERRFPCEYC--SLLVYPVLILFRFI------FVCTQGSADSHKHHLKDHV 79
             + VH+R+H+GE+ F C  C  S +    L     I      F C Q      + +LK H+
Sbjct:   639 LNVHMRIHTGEKPFTCTQCGKSFIHSSHLNQHLMIHTGEKPFKCPQCGKSFSQSYLKKHM 698

Query:    80 NKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFT 139
              KIH   + + C  C +T++     K+H    R    ++ + C +C +RF+      S T
Sbjct:   699 -KIHTGVREYMCLECEKTFITAAELKRHK---RIHTGEKPYKCSQCSKRFA-----HSGT 749

Query:   140 FSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTC 197
                          L +H   H GE + Y C+H  C + F+ +S +  H+  H  +  +TC
Sbjct:   750 -------------LKTHERIHTGE-KLYKCSHCNCGKSFNQSSNINLHMRIHTGEKPFTC 795

Query:   198 HMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC 257
               C   F+    L QH+ R+HTG   + CTQC   F  +  L +H+R HT E+PF C  C
Sbjct:   796 TQCRKSFSLLSSLNQHM-RIHTGEKPFTCTQCGKSFSLSSSLNRHMRIHTGEKPFTCTQC 854

Query:   258 QRTFRRKGLESFTFSLRLF-------CLY----FPQE--LISHSSYHGGEERRYVCNHMQ 304
              ++F      SF   +R+        C      F Q   L +H   H GE + ++C   Q
Sbjct:   855 GKSFSLSS--SFNQHMRMHTGEKPFTCTQCGKSFSQSSHLYNHMRIHTGE-KPFICT--Q 909

Query:   305 CTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPG 362
             C + F  +S L  H+  H  +  +TC  CG  F C  +L QH+ R+HTG  S+ CTQC  
Sbjct:   910 CGKSFSYSSHLNHHMRIHTGEKPFTCTQCGKSFNCSSQLNQHM-RIHTGEKSFTCTQCGK 968

Query:   363 KFYSAYELRQHVRQHTDERPFPCPVCQRTF 392
              FY +  L QH+R HT E+P+ C  C ++F
Sbjct:   969 SFYCSSHLNQHMRIHTGEKPYTCTQCGKSF 998

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-110913-160 si:dkey-29p23.3 "si:dkey-29p23.3" [Danio rerio (taxid:7955)]

 Score = 474 (171.9 bits), Expect = 2.7e-44, P = 2.7e-44
 Identities = 125/417 (29%), Positives = 190/417 (45%)

Query:     2 IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFI- 60
             +RIH G            ++  C  +++ H+R+H+GE+ F C  C      +  L   + 
Sbjct:   331 MRIHTGEKPFTCTQCGISFN--CSSYLKQHMRIHTGEKPFTCTQCGRSFNRLSHLNHHMR 388

Query:    61 -------FVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
                    F CTQ   + +   HL  H+ +IH   K  +C  CG+++   +S  +H+   R
Sbjct:   389 IHTGEKPFTCTQCWKSFNRSSHLDQHI-RIHTGEKPITCTQCGKSFRQSSSLYKHM---R 444

Query:   113 EKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 172
                 ++ F C +C + FS     +S +F+L             H   H G  + + C   
Sbjct:   445 IHTGEKPFTCTQCGKSFS-----QSSSFNL-------------HMRIHTGV-KPFTCT-- 483

Query:   173 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 230
             QC + F  AS L +H+ TH  +  +TC  CG  F     L QH+ R+HTG     CTQC 
Sbjct:   484 QCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSTLNQHI-RIHTGEKPITCTQCG 542

Query:   231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG-----LESFTFSLRLFCLYFPQELI 285
               F  A  L +H+R HT E+PF C  C ++F +       +   T      C    +  I
Sbjct:   543 KSFRQASSLNKHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPFTCTQCGKSFI 602

Query:   286 SHSSY------HGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTC 337
               S++      H GE + + C   QC + F  AS L +H+ TH  +  +TC  CG  F  
Sbjct:   603 QSSNFNLHMRIHTGE-KPFTCT--QCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNR 659

Query:   338 KRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
               RL QH+ R+HT    + CT+C   F  +  L  H+R HT E+PF C  C ++F R
Sbjct:   660 SSRLDQHI-RIHTREKPFTCTECGRSFNRSSHLNHHMRIHTGEKPFTCTQCGKSFNR 715

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 468 (169.8 bits), Expect = 2.0e-43, P = 2.0e-43
 Identities = 119/389 (30%), Positives = 183/389 (47%)

Query:    27 FIQVHLRLHSGERRFPCEYCS--------LLVYPVLILFRFIFVCTQ-GSADSHKHHLKD 77
             ++++H+ +H+GE+ F C  C         L V+ ++      F CTQ G + S   HL  
Sbjct:    23 YLKIHMMIHTGEKPFTCTQCGKSFSCLSHLNVHMMIHTGEKPFTCTQCGKSFSKSSHLNK 82

Query:    78 HVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFST------ 131
             H+   H   K F+C  CG+ +   +S  +H+        ++ F C +C + FS       
Sbjct:    83 HMMS-HTGEKPFTCTQCGKRFSQSSSRSKHMMI---HTGEKPFTCTQCGKSFSQLSHLDL 138

Query:   132 ----RDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARH 187
                   G + FT +       +   L  H   H GE + + C  +QC + F  +S L +H
Sbjct:   139 HMMIHTGEKPFTCTQCGKSFNYLSHLNHHMMIHTGE-KPFTC--LQCGKSFSKSSSLNQH 195

Query:   188 VSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQ 245
             +  H  +  +TC  CG  F+    L +H+ R+HTG   + CTQC   F  +  L QH+R 
Sbjct:   196 MRIHTGEKPFTCTQCGKSFSKSSSLNKHM-RIHTGEKPFTCTQCGKCFTCSSNLNQHMRI 254

Query:   246 HTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQC 305
             HT E+PF C  C ++F +        SL     Y       H  +H GE + + C   QC
Sbjct:   255 HTGEKPFICTQCGKSFSQSS------SLN----Y-------HMKFHAGE-KPFTCT--QC 294

Query:   306 TRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK 363
              + F  +S L +H+  H  +  +TC  CG  FTC   L QH+ R+HTG   + CTQC   
Sbjct:   295 GKSFSQSSHLNKHMRIHTGEKPFTCTQCGKCFTCSSNLNQHM-RIHTGEKPFICTQCGKS 353

Query:   364 FYSAYELRQHVRQHTDERPFPCPVCQRTF 392
             F  +  L  H++ HT E+PF C  C ++F
Sbjct:   354 FSQSTSLNYHMKIHTGEKPFTCTQCGKSF 382

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-159 si:ch211-197f20.2 "si:ch211-197f20.2" [Danio rerio (taxid:7955)]

 Score = 463 (168.0 bits), Expect = 2.0e-43, P = 2.0e-43
 Identities = 126/417 (30%), Positives = 193/417 (46%)

Query:     2 IRIHIGPSVILMLMIMTRYSLPCVDFIQVHLRLHSGERRFPCEYC-------SLLVYPVL 54
             +RIH G            ++  C  +++ H+R+H+GE+ F C  C       S L + + 
Sbjct:   112 MRIHTGEKPFTCTQCGISFN--CSSYLKQHMRIHTGEKPFTCTQCGRSFNRSSHLNHHMR 169

Query:    55 I-LFRFIFVCTQ-GSADSHKHHLKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACR 112
             I      F CTQ G + +   +L  H+ +IH   K  +C  CG+++   +S  +H+   R
Sbjct:   170 IHTGEKPFTCTQCGKSFNRSSNLDQHI-RIHTGEKPITCTLCGKSFRQSSSLSKHM---R 225

Query:   113 EKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHM 172
                 ++ F C +C + FS     +S  F+L             H   H GE + + C   
Sbjct:   226 THTGEKPFTCTQCGKSFS-----QSSNFNL-------------HMRIHTGE-KPFTCT-- 264

Query:   173 QCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP 230
             QC + F  AS L +H+ TH  +  +TC  CG  F     L QH+ R+HTG     CTQC 
Sbjct:   265 QCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSHLNQHI-RIHTGEKPITCTQCG 323

Query:   231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG-----LESFTFSLRLFCLY----FP 281
               F  +  L +H+R HT E+PF C  C ++F +       +   T    + C      F 
Sbjct:   324 KSFRQSSSLYRHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPITCTQCGKSFH 383

Query:   282 QE--LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTC 337
             Q   L  H   H GE + + C   QC + F   S L RH+  H  +  +TC  CG  F+ 
Sbjct:   384 QSSSLYKHMRIHTGE-KPFTCT--QCGKSFSRLSHLNRHMMIHTGEKPFTCTQCGKSFSR 440

Query:   338 KRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
                L +H+  +HTG   + C+QC   F +   L +H+R HT E+PF C  C ++FR+
Sbjct:   441 LSHLIRHMM-IHTGEKPFTCSQCRKSFSNLSSLYRHMRIHTGEKPFTCTQCGKSFRQ 496

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	410
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.93
KOG1074|consensus	958		99.93
KOG3608|consensus	467		99.92
KOG1074|consensus	958		99.91
KOG3623|consensus	1007		99.89
KOG2462|consensus	279		99.88
KOG3623|consensus	1007		99.79
KOG3576|consensus	267		99.58
KOG3576|consensus	267		99.45
PLN03086	567	PRLI-interacting factor K; Provisional	99.3
PLN03086	567	PRLI-interacting factor K; Provisional	99.11
PHA00733	128	hypothetical protein	99.08
PHA02768	55	hypothetical protein; Provisional	99.04
PHA00733	128	hypothetical protein	98.89
KOG3993|consensus	500		98.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.78
PHA02768	55	hypothetical protein; Provisional	98.71
KOG3993|consensus	500		98.7
PHA00616	44	hypothetical protein	98.53
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.4
PHA00732	79	hypothetical protein	98.3
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.22
PHA00732	79	hypothetical protein	98.16
PHA00616	44	hypothetical protein	98.04
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.9
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.77
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.47
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.42
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.39
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.27
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.27
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.06
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.03
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.98
smart00355	26	ZnF_C2H2 zinc finger.	96.79
PRK04860	160	hypothetical protein; Provisional	96.73
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.72
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.62
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.6
KOG2231|consensus	669		96.38
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.2
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.87
KOG2482|consensus	423		95.65
smart00355	26	ZnF_C2H2 zinc finger.	95.56
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.35
PRK04860	160	hypothetical protein; Provisional	95.32
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.3
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.23
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.21
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.85
KOG1146|consensus	1406		94.79
KOG2231|consensus	669		94.13
KOG2785|consensus	390		93.99
KOG1146|consensus	1406		92.84
KOG2785|consensus	390		92.74
KOG2482|consensus	423		92.68
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.24
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.18
KOG4124|consensus	442		91.74
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.69
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	90.54
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.53
COG5048	467	FOG: Zn-finger [General function prediction only]	90.23
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	90.2
COG5048	467	FOG: Zn-finger [General function prediction only]	88.96
KOG2893|consensus	341		88.82
KOG2893|consensus	341		87.74
KOG4173|consensus	253		86.91
COG4049	65	Uncharacterized protein containing archaeal-type C	84.67
KOG4173|consensus	253		84.61
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.06
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	81.93
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	81.73

>KOG2462|consensus

Probab=99.94  E-value=3.2e-28  Score=203.21  Aligned_cols=136  Identities=26%  Similarity=0.657  Sum_probs=128.2

Q ss_pred             CCCCCCCccchhhhhhcCCcccccccchhcccCchhhcccccccCC--CCcccccCcccccccccChhhHHHHHHcCCCC
Q psy12647        248 DERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGG--EERRYVCNHMQCTRRFHSASLLARHVSTHAIQ  325 (410)
Q Consensus       248 ~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~  325 (410)
                      ....|.|++|++.+.+.+                 +|..|..+|-.  +.+-+.|+  .|++.|.+...|+.|+++|.-+
T Consensus       127 ~~~r~~c~eCgk~ysT~s-----------------nLsrHkQ~H~~~~s~ka~~C~--~C~K~YvSmpALkMHirTH~l~  187 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSS-----------------NLSRHKQTHRSLDSKKAFSCK--YCGKVYVSMPALKMHIRTHTLP  187 (279)
T ss_pred             cCCceecccccccccccc-----------------ccchhhcccccccccccccCC--CCCceeeehHHHhhHhhccCCC
Confidence            345689999999999998                 99999999864  34778899  9999999999999999999999


Q ss_pred             cccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCC
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQ  403 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  403 (410)
                      .+|.+||+.|+..+.|+.|+ ++|+|||||.|+.|+++|.+.+||+.||++|.+.|.|+|..|+|+|+.++-|..|.-
T Consensus       188 c~C~iCGKaFSRPWLLQGHi-RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  188 CECGICGKAFSRPWLLQGHI-RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cccccccccccchHHhhccc-ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            99999999999999999999 999999999999999999999999999999999999999999999999999999864

>KOG3608|consensus

Probab=99.93  E-value=5.8e-27  Score=200.34  Aligned_cols=218  Identities=25%  Similarity=0.516  Sum_probs=196.7

Q ss_pred             ceeecCcccccccccChhHHHHHHhhCCC---------------Cccc--ccccccccChhHHHHHHhhhcCCCCccccC
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTHAI---------------QYTC--HMCGHMFTCKRRLTQHLARLHTGSLSYPCT  227 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~---------------~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  227 (410)
                      ..|.|.++.|+..|.+...|..|+..|..               .+.|  ..|.+.+.++..|++|+ +.|++++...|+
T Consensus       133 ~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~-r~Hs~eKvvACp  211 (467)
T KOG3608|consen  133 QNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI-RTHSNEKVVACP  211 (467)
T ss_pred             hhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHH-HhcCCCeEEecc
Confidence            56899999999999999999999987742               2445  45899999999999999 999999999999


Q ss_pred             CCCcccCCHHHHHHHHHHh--cCCCCCCCccchhhhhhcCCcccccccchhcccCchhhcccccccCCCCcccccCcccc
Q psy12647        228 QCPGKFYSAYELRQHVRQH--TDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQC  305 (410)
Q Consensus       228 ~C~~~f~~~~~l~~H~~~~--~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~C~~~~C  305 (410)
                      .|+..|.++..|.-|.+.-  ....+|.|..|.+.|.++.                 .|..|+..|.   ..|.|+  .|
T Consensus       212 ~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTek-----------------lL~~Hv~rHv---n~ykCp--lC  269 (467)
T KOG3608|consen  212 HCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEK-----------------LLKSHVVRHV---NCYKCP--LC  269 (467)
T ss_pred             hHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHH-----------------HHHHHHHHhh---hccccc--cc
Confidence            9999999999999998754  4456899999999999998                 9999998885   679999  99


Q ss_pred             cccccChhhHHHHHHcCC---CCcccccccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCcHhHHHHHHhhc-C
Q psy12647        306 TRRFHSASLLARHVSTHA---IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHT-D  379 (410)
Q Consensus       306 ~~~f~~~~~l~~H~~~~~---~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~  379 (410)
                      +.+....++|..|++..+   +||+|+.|.+.|.+.++|.+|+ .+|+ +..|.|..  |.++|.+..+|.+|++-++ |
T Consensus       270 dmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~-~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg  347 (467)
T KOG3608|consen  270 DMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHV-QVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEG  347 (467)
T ss_pred             ccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHH-Hhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccC
Confidence            999999999999999877   8999999999999999999998 6998 77899988  9999999999999998555 5


Q ss_pred             CC--CccCccccccccccccCccCCCCCCC
Q psy12647        380 ER--PFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       380 ~~--~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      ..  +|.|..|++.|++--+|.+|+++.|+
T Consensus       348 ~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  348 NNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             CCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            54  59999999999999999999999986

>KOG1074|consensus

Probab=99.93  E-value=1e-26  Score=219.46  Aligned_cols=194  Identities=24%  Similarity=0.498  Sum_probs=161.4

Q ss_pred             CcccccccccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCC----CCCCc---cchhhhhhcCC
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER----PFPCP---VCQRTFRRKGL  266 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~----~~~C~---~C~~~f~~~~~  266 (410)
                      +..|-+|.++.....+|+-|. ++|+||+||+|.+|++.|.++.+|+.|+-.|....    .+.|+   +|-+.|.+.- 
T Consensus       605 PNqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V-  682 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV-  682 (958)
T ss_pred             ccceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc-
Confidence            689999999999999999998 99999999999999999999999999999886654    47899   9999999988 


Q ss_pred             cccccccchhcccCchhhcccccccCCCC------------cccccCcccccccccChhhHHHHHHcCC-----------
Q psy12647        267 ESFTFSLRLFCLYFPQELISHSSYHGGEE------------RRYVCNHMQCTRRFHSASLLARHVSTHA-----------  323 (410)
Q Consensus       267 ~~~~~~~~~~~~~~~~~l~~H~~~~~~~~------------~~~~C~~~~C~~~f~~~~~l~~H~~~~~-----------  323 (410)
                                      .|..|++.|.+..            ..-.|.  .|.+.|.+...+..++..+.           
T Consensus       683 ----------------~lpQhIriH~~~~~s~g~~a~e~~~~adq~~--~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~  744 (958)
T KOG1074|consen  683 ----------------TLPQHIRIHLGGQISNGGTAAEGILAADQCS--SCQKTFSDARSFSQQISEQPSPESEPDEQMD  744 (958)
T ss_pred             ----------------cccceEEeecCCCCCCCcccccccchhcccc--hhhhcccccccchhhhhccCCcccCCccccc
Confidence                            8888888887421            123477  89999988888888877661           


Q ss_pred             -----------CCcccccccCccCChhhHHHHHHhhcC-----------------------CC-----------------
Q psy12647        324 -----------IQYTCHMCGHMFTCKRRLTQHLARLHT-----------------------GS-----------------  352 (410)
Q Consensus       324 -----------~~~~C~~C~~~f~~~~~l~~H~~~~H~-----------------------~~-----------------  352 (410)
                                 .+.-+..|+..+.....+..+- ..+.                       ++                 
T Consensus       745 ~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g-~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v  823 (958)
T KOG1074|consen  745 ERTETEELDVTPPPPENSCGRELEGEMAISVRG-STEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSV  823 (958)
T ss_pred             ccccccccccCCCccccccccccCccccccccc-chhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCcccc
Confidence                       2466777888777766655553 2220                       00                 


Q ss_pred             ------------------------------------------------------CCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        353 ------------------------------------------------------LSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       353 ------------------------------------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                                                                            ....|.+|++.|...++|+.|+|+|+
T Consensus       824 ~~~pvl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHt  903 (958)
T KOG1074|consen  824 NMDPVLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHT  903 (958)
T ss_pred             ccCchhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCC
Confidence                                                                  11569999999999999999999999


Q ss_pred             CCCCccCccccccccccccCccCCCCCCCC
Q psy12647        379 DERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       379 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      ++|||.|.+|++.|..+..|+.||..++|.
T Consensus       904 g~KPF~C~fC~~aFttrgnLKvHMgtH~w~  933 (958)
T KOG1074|consen  904 GPKPFFCHFCEEAFTTRGNLKVHMGTHMWV  933 (958)
T ss_pred             CCCCccchhhhhhhhhhhhhhhhhcccccc
Confidence            999999999999999999999999977764

>KOG3608|consensus

Probab=99.92  E-value=5.9e-26  Score=194.20  Aligned_cols=313  Identities=25%  Similarity=0.457  Sum_probs=214.8

Q ss_pred             HHHHHHHHhhcCCCc-HHHHHHHHhhhcCCCcccCCCCCCccccchhceeeeeeecCCCcccchhhHHHHhhhhcCCCCc
Q psy12647         10 VILMLMIMTRYSLPC-VDFIQVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKT   88 (410)
Q Consensus        10 ~~~c~~~~c~~~~~~-~~~l~~H~~~h~~~~~~~C~~C~~~f~~~l~~h~~~~~c~~~~~~~~~~~l~~H~~~~h~~~~~   88 (410)
                      .+.|.+-.|++...+ ..+|++|+..|--..  +|..=|+   ..|+.|..+-.|.  ..|...       .++-.....
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~--~l~q~G~---~al~~~~dig~c~--~~f~~~-------~~ip~~g~~  134 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHT--KLKQQGK---LALDLHPDIGACT--APFRLM-------EKIPALGQN  134 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHH--HHHHHHH---HHHhcCCCcCccc--CCcchh-------hccccchhh
Confidence            678888899888888 578999987762100  0000000   0022222211111  111111       222223344


Q ss_pred             eecc--cccccccCchhHHHHHHHhhhcCCCCcccCCcCcccccCcccccccccccccccccchhhhhccccccCCCcce
Q psy12647         89 FSCN--SCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERR  166 (410)
Q Consensus        89 ~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~l~~h~~~~~~~~~~  166 (410)
                      |.|.  .|+..|.+...|.+|+..   +..    -|. =+..+...+                             +...
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~---H~l----~ce-yd~~~~~~D-----------------------------~~pv  177 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVK---HAL----FCE-YDIQKTPED-----------------------------ERPV  177 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHH---hhh----hhh-hhhhhCCCC-----------------------------CCce
Confidence            8886  599999999999999876   221    110 001111111                             1144


Q ss_pred             eecCcccccccccChhHHHHHHhhCCC--CcccccccccccChhHHHHHHhhhcC-CCCccccCCCCcccCCHHHHHHHH
Q psy12647        167 YVCNHMQCTRRFHSASLLARHVSTHAI--QYTCHMCGHMFTCKRRLTQHLARLHT-GSLSYPCTQCPGKFYSAYELRQHV  243 (410)
Q Consensus       167 ~~C~~~~C~~~f~~~~~l~~H~~~~~~--~~~C~~C~~~f~~~~~l~~H~~~~H~-~~~~~~C~~C~~~f~~~~~l~~H~  243 (410)
                      +.|.+..|.+.+.++..|..|++.|..  ...|+.||.-|+++..|-.|+++.-. ...+|+|..|.+.|.++..|..|+
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv  257 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHV  257 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHH
Confidence            667777888888888888888888765  56788888888888888888754432 345788888888888888888888


Q ss_pred             HHhcCCCCCCCccchhhhhhcCCcccccccchhcccCchhhcccccccCCCCcccccCcccccccccChhhHHHHHHcCC
Q psy12647        244 RQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA  323 (410)
Q Consensus       244 ~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~  323 (410)
                      ..|-.  .|+|+.|+-.....+                 +|..|++..+.+.+||+|+  .|++.+.+.++|.+|...|.
T Consensus       258 ~rHvn--~ykCplCdmtc~~~s-----------------sL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  258 VRHVN--CYKCPLCDMTCSSAS-----------------SLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHhhh--cccccccccCCCChH-----------------HHHHHHHhhhccCCCcccc--chhhhhccHHHHHHHHHhcc
Confidence            87754  378888887777766                 8888887766666899999  89999999999999998887


Q ss_pred             -CCccccc--ccCccCChhhHHHHHHhhcCCCC--CcccCcCcccccCcHhHHHHHHhhcC------CCCccCccccccc
Q psy12647        324 -IQYTCHM--CGHMFTCKRRLTQHLARLHTGSL--SYPCTQCPGKFYSAYELRQHVRQHTD------ERPFPCPVCQRTF  392 (410)
Q Consensus       324 -~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~------~~~~~C~~C~~~f  392 (410)
                       ..|+|..  |..+|.....|++|++.+|.|..  +|.|-.|++.|+...+|..|+..-++      -+.|.-.+|.-.|
T Consensus       317 ~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~  396 (467)
T KOG3608|consen  317 KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGF  396 (467)
T ss_pred             ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCce
Confidence             6799988  99999999999999988886554  59999999999999999999765443      3446666666665


Q ss_pred             cc
Q psy12647        393 RR  394 (410)
Q Consensus       393 ~~  394 (410)
                      -.
T Consensus       397 mR  398 (467)
T KOG3608|consen  397 MR  398 (467)
T ss_pred             ee
Confidence            43

>KOG1074|consensus

Probab=99.91  E-value=2.4e-25  Score=210.30  Aligned_cols=208  Identities=27%  Similarity=0.457  Sum_probs=136.5

Q ss_pred             ceeecCcccccccccChhHHHHHHhhCCC--CcccccccccccChhHHHHHHhhhcCCC----CccccC---CCCcccCC
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTHAI--QYTCHMCGHMFTCKRRLTQHLARLHTGS----LSYPCT---QCPGKFYS  235 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~--~~~C~~C~~~f~~~~~l~~H~~~~H~~~----~~~~C~---~C~~~f~~  235 (410)
                      .+.+|.  +|-++..-.+.|+.|.++|.+  ||+|.+||+.|.++..|+.|| .+|...    .++.|+   +|.+.|.+
T Consensus       604 dPNqCi--iC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn  680 (958)
T KOG1074|consen  604 DPNQCI--ICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTN  680 (958)
T ss_pred             Ccccee--eeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhcccccc
Confidence            467888  888888888888888888877  888888888888888888888 777654    447788   88888888


Q ss_pred             HHHHHHHHHHhcCCC-------------CCCCccchhhhhhcCC----cccccccchhcccCchhhcccccccCCC---C
Q psy12647        236 AYELRQHVRQHTDER-------------PFPCPVCQRTFRRKGL----ESFTFSLRLFCLYFPQELISHSSYHGGE---E  295 (410)
Q Consensus       236 ~~~l~~H~~~~~~~~-------------~~~C~~C~~~f~~~~~----~~~~~~~~~~~~~~~~~l~~H~~~~~~~---~  295 (410)
                      .-.|..|+++|.+..             .-+|..|.+.|.....    .....+-..++     ....+.+...++   .
T Consensus       681 ~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~-----~~~~~~~t~t~~~~~t  755 (958)
T KOG1074|consen  681 AVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEP-----DEQMDERTETEELDVT  755 (958)
T ss_pred             cccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCC-----cccccccccccccccC
Confidence            888888888876321             1357777777643320    00000000000     000000111110   0


Q ss_pred             cccccCcccccccccChhhHHHHHHcC-----------------------------------------------------
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTH-----------------------------------------------------  322 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~-----------------------------------------------------  322 (410)
                      .+..+.  .|+..+.....+..+-...                                                     
T Consensus       756 p~~~e~--~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~  833 (958)
T KOG1074|consen  756 PPPPEN--SCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQE  833 (958)
T ss_pred             CCcccc--ccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccc
Confidence            011122  2222221111111110000                                                     


Q ss_pred             -------------------------------------------CCCcccccccCccCChhhHHHHHHhhcCCCCCcccCc
Q psy12647        323 -------------------------------------------AIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQ  359 (410)
Q Consensus       323 -------------------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  359 (410)
                                                                 .....|..|++.|.+.+.|..|+ ++|++++||.|.+
T Consensus       834 ~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~-rTHtg~KPF~C~f  912 (958)
T KOG1074|consen  834 TSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHM-RTHTGPKPFFCHF  912 (958)
T ss_pred             ccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhh-hcCCCCCCccchh
Confidence                                                       01278999999999999999999 9999999999999


Q ss_pred             CcccccCcHhHHHHHHhhcCCCCc
Q psy12647        360 CPGKFYSAYELRQHVRQHTDERPF  383 (410)
Q Consensus       360 C~~~f~~~~~l~~H~~~h~~~~~~  383 (410)
                      |++.|+.+.+|..||.+|.+..++
T Consensus       913 C~~aFttrgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  913 CEEAFTTRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhhhhhhhhhhhhccccccCCC
Confidence            999999999999999999987654

>KOG3623|consensus

Probab=99.89  E-value=9.4e-24  Score=196.26  Aligned_cols=98  Identities=29%  Similarity=0.750  Sum_probs=88.0

Q ss_pred             ceeecCcccccccccChhHHHHHHhhCCC----CcccccccccccChhHHHHHHhhhcCCC-------------CccccC
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTHAI----QYTCHMCGHMFTCKRRLTQHLARLHTGS-------------LSYPCT  227 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~----~~~C~~C~~~f~~~~~l~~H~~~~H~~~-------------~~~~C~  227 (410)
                      ....|+  .|++.+.....|+.|++..+.    .|.|..|.+.|.....|.+|| .+|...             +.|+|+
T Consensus       209 qlltcp--ycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFKCt  285 (1007)
T KOG3623|consen  209 QLLTCP--YCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFKCT  285 (1007)
T ss_pred             hhhcch--hHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhcccccc
Confidence            457899  999999999999999987554    799999999999999999999 777532             459999


Q ss_pred             CCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcC
Q psy12647        228 QCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG  265 (410)
Q Consensus       228 ~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~  265 (410)
                      .|++.|..+..|+.|+++|.|++||.|+.|++.|....
T Consensus       286 ECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSG  323 (1007)
T KOG3623|consen  286 ECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSG  323 (1007)
T ss_pred             ccchhhhhHHHHHhhheeecCCCCcCCcccccccccCC
Confidence            99999999999999999999999999999999997543

>KOG2462|consensus

Probab=99.88  E-value=6e-23  Score=171.75  Aligned_cols=128  Identities=29%  Similarity=0.687  Sum_probs=118.6

Q ss_pred             CCcccCCcCcccccCcccccccccccccccccchhhhhccccccCCC--cceeecCcccccccccChhHHHHHHhhCCCC
Q psy12647        117 KETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGE--ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ  194 (410)
Q Consensus       117 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~l~~h~~~~~~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~  194 (410)
                      ...|.|+.||+.+.+..+                  |..|..+|-.-  .+.+.|+  .|++.|.+..+|..|+++|.-+
T Consensus       128 ~~r~~c~eCgk~ysT~sn------------------LsrHkQ~H~~~~s~ka~~C~--~C~K~YvSmpALkMHirTH~l~  187 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSN------------------LSRHKQTHRSLDSKKAFSCK--YCGKVYVSMPALKMHIRTHTLP  187 (279)
T ss_pred             CCceeccccccccccccc------------------cchhhcccccccccccccCC--CCCceeeehHHHhhHhhccCCC
Confidence            346899999999999999                  66666666442  3668899  9999999999999999999999


Q ss_pred             cccccccccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcC
Q psy12647        195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG  265 (410)
Q Consensus       195 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~  265 (410)
                      ..|.+||+.|...=-|+-|+ ++|+||+||.|+.|++.|..+++|+.|+++|.+.+.|+|..|++.|...+
T Consensus       188 c~C~iCGKaFSRPWLLQGHi-RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~S  257 (279)
T KOG2462|consen  188 CECGICGKAFSRPWLLQGHI-RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKS  257 (279)
T ss_pred             cccccccccccchHHhhccc-ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999999999999887

>KOG3623|consensus

Probab=99.79  E-value=4.1e-20  Score=172.30  Aligned_cols=86  Identities=28%  Similarity=0.579  Sum_probs=80.0

Q ss_pred             HHHcCCCCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcccccccccccc
Q psy12647        318 HVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVC  397 (410)
Q Consensus       318 H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  397 (410)
                      |.+....+|.|+.|++.|.-.+.|.+|. ..|+|.+||+|.+|.+.|..+..|.+|+|.|.|+|||+|+-|+|.|+-..+
T Consensus       887 ~~kte~gmyaCDqCDK~FqKqSSLaRHK-YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGS  965 (1007)
T KOG3623|consen  887 HAKTEDGMYACDQCDKAFQKQSSLARHK-YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGS  965 (1007)
T ss_pred             cccCccccchHHHHHHHHHhhHHHHHhh-hhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccc
Confidence            4444558999999999999999999996 999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCC
Q psy12647        398 TTPSPQP  404 (410)
Q Consensus       398 l~~H~~~  404 (410)
                      ..+||.-
T Consensus       966 YSQHMNH  972 (1007)
T KOG3623|consen  966 YSQHMNH  972 (1007)
T ss_pred             hHhhhcc
Confidence            9999864

>KOG3576|consensus

Probab=99.58  E-value=3.1e-16  Score=124.68  Aligned_cols=111  Identities=25%  Similarity=0.519  Sum_probs=102.8

Q ss_pred             CcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHH
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQ  372 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~  372 (410)
                      ...|.|.  .|++.|.-...|.+|++-|.  +.|-|..||+.|.+--+|++|+ ++|+|.+||+|..|+++|++...|..
T Consensus       115 ~d~ftCr--vCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~-rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  115 QDSFTCR--VCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCeeeee--hhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhh-ccccCccccchhhhhHHHHhhccHHH
Confidence            3789999  99999999999999999998  8899999999999999999998 99999999999999999999999999


Q ss_pred             HHHhhcC-----------CCCccCccccccccccccCccCCCCCCCC
Q psy12647        373 HVRQHTD-----------ERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       373 H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      |++.-+|           ++.|.|..||++-.....+..|++..|+.
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            9875443           45699999999999999999999998864

>KOG3576|consensus

Probab=99.45  E-value=2.2e-14  Score=114.21  Aligned_cols=71  Identities=34%  Similarity=0.844  Sum_probs=51.3

Q ss_pred             CcccccccccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcC
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG  265 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~  265 (410)
                      .+.|.+|++.|.-..-|.+|+ .-|...+.+.|..|++.|+....|++|+++|++.+||+|..|++.|+++-
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrc  187 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRC  187 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhc
Confidence            466777777777777777776 66776677777777777777777777777777777777777777777766

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.30  E-value=4.5e-12  Score=120.18  Aligned_cols=147  Identities=20%  Similarity=0.390  Sum_probs=119.3

Q ss_pred             cccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc--chhhhhhcCCcccccccchhcccCchhhcccccccCCCCcccccC
Q psy12647        224 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCN  301 (410)
Q Consensus       224 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~C~  301 (410)
                      ..|+.|.+... ...|..|...... ....|+.  |+..|...                  .+.+|          +.|+
T Consensus       408 V~C~NC~~~i~-l~~l~lHe~~C~r-~~V~Cp~~~Cg~v~~r~------------------el~~H----------~~C~  457 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHEAYCSR-HNVVCPHDGCGIVLRVE------------------EAKNH----------VHCE  457 (567)
T ss_pred             EECCCCCCccc-hhHHHHHHhhCCC-cceeCCcccccceeecc------------------ccccC----------ccCC
Confidence            57999988765 4556678765433 3456874  99888655                  44444          5899


Q ss_pred             cccccccccChhhHHHHHHcCCCCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccC----------cHhHH
Q psy12647        302 HMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYS----------AYELR  371 (410)
Q Consensus       302 ~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~----------~~~l~  371 (410)
                        .|++.|. ...|..|+..++.++.|+ |++.+ .+..|..|+ .+|..++|+.|+.|++.|..          .+.|.
T Consensus       458 --~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt  531 (567)
T PLN03086        458 --KCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQ-ASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMS  531 (567)
T ss_pred             --CCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhh-hccCCCCceeCCCCCCccccCccccchhhhhhhHH
Confidence              9999996 688999999999999999 99765 678999997 88999999999999999952          46899


Q ss_pred             HHHHhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        372 QHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       372 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      .|..+. |.+++.|..||+.|..+. +..|+...|.+
T Consensus       532 ~HE~~C-G~rt~~C~~Cgk~Vrlrd-m~~H~~~~h~~  566 (567)
T PLN03086        532 EHESIC-GSRTAPCDSCGRSVMLKE-MDIHQIAVHQK  566 (567)
T ss_pred             HHHHhc-CCcceEccccCCeeeehh-HHHHHHHhhcC
Confidence            999985 889999999999998875 88998888864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.11  E-value=1.5e-10  Score=109.91  Aligned_cols=136  Identities=21%  Similarity=0.441  Sum_probs=110.1

Q ss_pred             ceecccccccccCchhHHHHHHHhhhcCCCCcccCCc--CcccccCcccccccccccccccccchhhhhccccccCCCcc
Q psy12647         88 TFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKR--CDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEER  165 (410)
Q Consensus        88 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~l~~h~~~~~~~~~  165 (410)
                      ...|+.|.+.... ..|..|...|.    -....|+.  |+..|....                   +.          .
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~~C~----r~~V~Cp~~~Cg~v~~r~e-------------------l~----------~  452 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEAYCS----RHNVVCPHDGCGIVLRVEE-------------------AK----------N  452 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHhhCC----CcceeCCcccccceeeccc-------------------cc----------c
Confidence            4679999887764 45778887642    23456884  999985544                   33          3


Q ss_pred             eeecCcccccccccChhHHHHHHhhCCCCcccccccccccChhHHHHHHhhhcCCCCccccCCCCcccCC----------
Q psy12647        166 RYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYS----------  235 (410)
Q Consensus       166 ~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~----------  235 (410)
                      .+.|+  .|++.|. ...|..|+.+++.++.|+ ||+.+ ....|..|+ ..|.+.+++.|++|++.+..          
T Consensus       453 H~~C~--~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        453 HVHCE--KCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQ-ASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             CccCC--CCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhh-hccCCCCceeCCCCCCccccCccccchhhh
Confidence            35899  9999996 678999999998999999 99755 679999998 88999999999999999852          


Q ss_pred             HHHHHHHHHHhcCCCCCCCccchhhhhhc
Q psy12647        236 AYELRQHVRQHTDERPFPCPVCQRTFRRK  264 (410)
Q Consensus       236 ~~~l~~H~~~~~~~~~~~C~~C~~~f~~~  264 (410)
                      ...|..|.... +.+++.|..|++.+..+
T Consensus       527 ~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        527 LRGMSEHESIC-GSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             hhhHHHHHHhc-CCcceEccccCCeeeeh
Confidence            35799998885 89999999999999877

>PHA00733 hypothetical protein

Probab=99.08  E-value=3.2e-11  Score=93.34  Aligned_cols=82  Identities=24%  Similarity=0.373  Sum_probs=52.0

Q ss_pred             CCcccccccCccCChhhHHHH--H--HhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQH--L--ARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTT  399 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H--~--~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  399 (410)
                      +++.|.+|+..|.....|..+  +  ...+.+++||.|+.|++.|.....|..|++.|  +.+|.|.+|+++|.....|.
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHH
Confidence            455555555555555544444  1  01233466777777777777777777777765  24577777777777777777


Q ss_pred             cCCCCCCC
Q psy12647        400 PSPQPQHL  407 (410)
Q Consensus       400 ~H~~~~H~  407 (410)
                      .|+...|.
T Consensus       117 ~H~~~~h~  124 (128)
T PHA00733        117 DHVCKKHN  124 (128)
T ss_pred             HHHHHhcC
Confidence            77777665

>PHA02768 hypothetical protein; Provisional

Probab=99.04  E-value=1.1e-10  Score=73.61  Aligned_cols=45  Identities=20%  Similarity=0.386  Sum_probs=39.3

Q ss_pred             CcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCcc
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTP  400 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  400 (410)
                      .|.|+.||+.|+..++|..|+++|+  ++|+|..|+++|..+++|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            5889999999999999999999988  68899999999998887753

>PHA00733 hypothetical protein

Probab=98.89  E-value=2.1e-09  Score=83.20  Aligned_cols=80  Identities=23%  Similarity=0.398  Sum_probs=68.4

Q ss_pred             CcccccCcccccccccChhhHHHH--HHc----CC-CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCc
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARH--VST----HA-IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSA  367 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H--~~~----~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~  367 (410)
                      .+++.|.  .|...|.....|..+  +..    +. ++|.|+.|++.|.+.+.|..|+ ..|  +.+|.|+.|++.|...
T Consensus        38 ~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h--~~~~~C~~CgK~F~~~  112 (128)
T PHA00733         38 QKRLIRA--VVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHI-RYT--EHSKVCPVCGKEFRNT  112 (128)
T ss_pred             hhhHHHH--HHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHH-hcC--CcCccCCCCCCccCCH
Confidence            3889999  999999888777776  222    22 7999999999999999999998 655  4679999999999999


Q ss_pred             HhHHHHHHhhcC
Q psy12647        368 YELRQHVRQHTD  379 (410)
Q Consensus       368 ~~l~~H~~~h~~  379 (410)
                      ..|.+|++..++
T Consensus       113 ~sL~~H~~~~h~  124 (128)
T PHA00733        113 DSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHhcC
Confidence            999999988775

>KOG3993|consensus

Probab=98.78  E-value=7.3e-10  Score=98.50  Aligned_cols=196  Identities=16%  Similarity=0.207  Sum_probs=123.9

Q ss_pred             CcccccccccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCC--Cccchh-hhhhcCCcccc
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFP--CPVCQR-TFRRKGLESFT  270 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~--C~~C~~-~f~~~~~~~~~  270 (410)
                      .|.|..|...|.+...|.+|. =.-.....|+|+.|++.|+-..+|..|.++|.+...-.  -..=.+ ......     
T Consensus       267 dyiCqLCK~kYeD~F~LAQHr-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~ra-----  340 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHR-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRA-----  340 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhcc-CCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhh-----
Confidence            588999999999999999885 22223346899999999999999999999886543211  000000 000000     


Q ss_pred             cccchhcccCchhhccccc-ccCCCCcccccCcccccccccChhhHHHHHHcCCCC-------------------ccccc
Q psy12647        271 FSLRLFCLYFPQELISHSS-YHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-------------------YTCHM  330 (410)
Q Consensus       271 ~~~~~~~~~~~~~l~~H~~-~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~-------------------~~C~~  330 (410)
                                  ...+-.+ -...+...|.|.  .|++.|.....|+.|+.+|++.                   +.+..
T Consensus       341 ------------e~~ea~rsg~dss~gi~~C~--~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~  406 (500)
T KOG3993|consen  341 ------------EVQEAERSGDDSSSGIFSCH--TCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQA  406 (500)
T ss_pred             ------------hhhhccccCCcccCceeecH--HhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccc
Confidence                        0000000 001223689999  9999999999999998777611                   33444


Q ss_pred             ccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCCC
Q psy12647        331 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDV  409 (410)
Q Consensus       331 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  409 (410)
                      |.-.+.....-..+.-.+-..+..-.|+.|+..+..+..-.-+.+.-..+..|.|.+|.-+|.+...|.+|+++-|...
T Consensus       407 ~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  407 VATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             cccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence            4433333222222210111112224688888888777766666666566677999999999999999999999999764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.78  E-value=3.4e-09  Score=57.18  Aligned_cols=26  Identities=46%  Similarity=1.155  Sum_probs=20.9

Q ss_pred             hHHHHHHhhcCCCCccCccccccccc
Q psy12647        369 ELRQHVRQHTDERPFPCPVCQRTFRR  394 (410)
Q Consensus       369 ~l~~H~~~h~~~~~~~C~~C~~~f~~  394 (410)
                      +|.+|+++|+|++||+|++|+++|++
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888888888888888888863

...

>PHA02768 hypothetical protein; Provisional

Probab=98.71  E-value=6.8e-09  Score=65.61  Aligned_cols=44  Identities=23%  Similarity=0.539  Sum_probs=34.5

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHH
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELR  371 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  371 (410)
                      .|+|+.||+.|+..+.|..|+ ++|.  +||+|..|++.|...++|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~-r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHL-RKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHH-HhcC--CcccCCcccceecccceeE
Confidence            478888888888888888887 6677  6788888888888777664

>KOG3993|consensus

Probab=98.70  E-value=3.4e-09  Score=94.30  Aligned_cols=173  Identities=24%  Similarity=0.401  Sum_probs=109.8

Q ss_pred             ceeecCcccccccccChhHHHHHHh--hCCCCcccccccccccChhHHHHHHhhhcCC----------------------
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVS--THAIQYTCHMCGHMFTCKRRLTQHLARLHTG----------------------  220 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~--~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~----------------------  220 (410)
                      ..|.|.  .|...|.+.-.|.+|.=  +-+..|+|+.|+++|.....|..|. ++|..                      
T Consensus       266 GdyiCq--LCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHR-RWHKPR~eaa~a~~~P~k~~~~~rae~  342 (500)
T KOG3993|consen  266 GDYICQ--LCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHR-RWHKPRPEAAKAGSPPPKQAVETRAEV  342 (500)
T ss_pred             HHHHHH--HHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhh-cccCCchhhhhcCCCChhhhhhhhhhh
Confidence            348899  99999999999999963  3344899999999999999999997 77742                      


Q ss_pred             -----------CCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcCCcccccccchhcccCchhhcccc-
Q psy12647        221 -----------SLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHS-  288 (410)
Q Consensus       221 -----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~-  288 (410)
                                 +..|.|..|+++|....-|+.|+.+|.....-+-.  .-.|....+        ......+..+..|. 
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~--a~~f~~s~~--------~~l~~~~~~~a~h~~  412 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEK--APKFLLSRV--------IPLMHFNQAVATHSS  412 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhc--ccCcchhhc--------ccccccccccccccc
Confidence                       12388999999999999999998887643211100  001111100        00000111222222 


Q ss_pred             ---------cccCCCCcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCC
Q psy12647        289 ---------SYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       289 ---------~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                               ..+.+....-.++  .++..+.++..-..+.+...  ..|.|.+|.-.|.+...|.+|+...|..+
T Consensus       413 a~~~~g~~vl~~a~sael~~pp--~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  413 ASDSHGDEVLYVAGSAELELPP--YDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             cccccccceeeeeccccccCCC--CCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence                     2222222333445  66666666655444443333  56888888888888888888876666654

>PHA00616 hypothetical protein

Probab=98.53  E-value=4e-08  Score=58.93  Aligned_cols=40  Identities=23%  Similarity=0.410  Sum_probs=33.6

Q ss_pred             CcccCcCcccccCcHhHHHHHHhhcCCCCccCcccccccc
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFR  393 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  393 (410)
                      ||+|+.||+.|.++++|.+|++.|+|++++.|++=-..|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f~   40 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYFR   40 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEEE
Confidence            6899999999999999999999999999988876544444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.40  E-value=1.4e-07  Score=50.82  Aligned_cols=26  Identities=38%  Similarity=0.812  Sum_probs=23.4

Q ss_pred             hHHHHHHhhcCCCCCcccCcCcccccC
Q psy12647        340 RLTQHLARLHTGSLSYPCTQCPGKFYS  366 (410)
Q Consensus       340 ~l~~H~~~~H~~~~~~~C~~C~~~f~~  366 (410)
                      +|..|+ ++|++++||.|+.|+++|.+
T Consensus         1 ~l~~H~-~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHM-RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHH-HHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHh-hhcCCCCCCCCCCCcCeeCc
Confidence            488998 78999999999999999964

...

>PHA00732 hypothetical protein

Probab=98.30  E-value=5.2e-07  Score=63.09  Aligned_cols=48  Identities=29%  Similarity=0.533  Sum_probs=30.3

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      ||.|..|++.|.+.+.|..|++..|.   ++.|+.|++.|.   .|..|+++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            46677777777777777777633454   246777777776   4666665543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.22  E-value=2.2e-06  Score=55.64  Aligned_cols=52  Identities=21%  Similarity=0.477  Sum_probs=40.8

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCC-CCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGS-LSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      .|.|++|++. .+...|..|+...|..+ +.+.||+|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            4889999994 55678999988888876 4689999998655  488999887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.16  E-value=1.5e-06  Score=60.78  Aligned_cols=43  Identities=30%  Similarity=0.656  Sum_probs=22.3

Q ss_pred             CcccCcCcccccCcHhHHHHHHh-hcCCCCccCccccccccccccCccCC
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQ-HTDERPFPCPVCQRTFRRKVCTTPSP  402 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~  402 (410)
                      ||.|+.|++.|....+|..|++. |.+   +.|+.|+++|.   .|.+|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhh
Confidence            35555555555555555555553 332   35555555555   244444

>PHA00616 hypothetical protein

Probab=98.04  E-value=1.9e-06  Score=51.81  Aligned_cols=36  Identities=22%  Similarity=0.368  Sum_probs=31.4

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP  361 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  361 (410)
                      ||+|+.||+.|...+.|..|+ +.|++++++.|+.=-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~-r~~hg~~~~~~~~~y   36 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHL-LSVHKQNKLTLEYFY   36 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHH-HHhcCCCccceeEEE
Confidence            689999999999999999998 888888999887533

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.90  E-value=2e-05  Score=51.15  Aligned_cols=51  Identities=22%  Similarity=0.477  Sum_probs=40.7

Q ss_pred             CcccccccccccChhHHHHHHhhhcCCC-CccccCCCCcccCCHHHHHHHHHHhc
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLARLHTGS-LSYPCTQCPGKFYSAYELRQHVRQHT  247 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~  247 (410)
                      .|.|++|++ .-+...|..|+...|..+ +.+.||+|...+.  ..|..|+...+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            478999999 566788999998888875 4689999988644  48888888765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.77  E-value=1.4e-05  Score=41.71  Aligned_cols=23  Identities=39%  Similarity=0.865  Sum_probs=14.3

Q ss_pred             cccCcCcccccCcHhHHHHHHhh
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h  377 (410)
                      |.|+.|++.|.+..+|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.47  E-value=1.1e-05  Score=60.27  Aligned_cols=72  Identities=24%  Similarity=0.344  Sum_probs=19.4

Q ss_pred             cCcccccccccChhhHHHHHHcCCCCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhh
Q psy12647        300 CNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       300 C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  377 (410)
                      |.  .|+..|.+...|..|+...+... -+ ....+.....+..+++.  .....+.|..|++.|.+...|..||+.+
T Consensus         2 C~--~C~~~f~~~~~l~~H~~~~H~~~-~~-~~~~l~~~~~~~~~~~~--~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CL--FCDESFSSVDDLLQHMKKKHGFD-IP-DQKYLVDPNRLLNYLRK--KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             cc--ccccccccccccccccccccccc-cc-ccccccccccccccccc--ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            55  77777777777777776655211 01 12222233344444311  1223678888888888888888888854

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.42  E-value=9.8e-05  Score=38.82  Aligned_cols=23  Identities=48%  Similarity=0.896  Sum_probs=12.2

Q ss_pred             cccCcCcccccCcHhHHHHHHhh
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h  377 (410)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45566666666666666665554

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.39  E-value=8e-05  Score=40.55  Aligned_cols=25  Identities=36%  Similarity=0.752  Sum_probs=15.7

Q ss_pred             CcccCcCcccccCcHhHHHHHHhhc
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      ||.|+.|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666666554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.27  E-value=0.00017  Score=62.56  Aligned_cols=28  Identities=18%  Similarity=0.596  Sum_probs=23.4

Q ss_pred             CCCCccCccccccccccccCccCCCCCC
Q psy12647        379 DERPFPCPVCQRTFRRKVCTTPSPQPQH  406 (410)
Q Consensus       379 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H  406 (410)
                      .+|||.|.+|+|.+++.--|+-|++-.|
T Consensus       395 ~~KPYrCevC~KRYKNlNGLKYHr~Hsh  422 (423)
T COG5189         395 KDKPYRCEVCDKRYKNLNGLKYHRKHSH  422 (423)
T ss_pred             cCCceeccccchhhccCccceecccccC
Confidence            4588999999999999988988887655

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.27  E-value=0.00011  Score=38.24  Aligned_cols=20  Identities=40%  Similarity=1.072  Sum_probs=14.4

Q ss_pred             cccccccCccCChhhHHHHH
Q psy12647        326 YTCHMCGHMFTCKRRLTQHL  345 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~  345 (410)
                      |.|++|++.|.+...|..|+
T Consensus         1 y~C~~C~~~f~~~~~l~~H~   20 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHM   20 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHH
Confidence            56777777777777777776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.06  E-value=0.00038  Score=36.50  Aligned_cols=22  Identities=36%  Similarity=0.910  Sum_probs=15.1

Q ss_pred             cccccccCccCChhhHHHHHHh
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLAR  347 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~  347 (410)
                      |.|++|++.|.+...|+.|+..
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            5678888888888888888743

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.03  E-value=0.0002  Score=62.06  Aligned_cols=27  Identities=19%  Similarity=0.487  Sum_probs=21.4

Q ss_pred             cccccCcccccccccChhhHHHHHHcC
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTH  322 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~  322 (410)
                      +||+|+.+.|++.+++...|+.|+.-.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhG  374 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHG  374 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhcc
Confidence            888888888888888888888886543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.98  E-value=0.00051  Score=42.26  Aligned_cols=41  Identities=17%  Similarity=0.314  Sum_probs=25.4

Q ss_pred             HHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCC
Q psy12647        342 TQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  382 (410)
Q Consensus       342 ~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  382 (410)
                      ..+.+..+..+.|-.|++|+..+....+|++|+.++++.+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34444455667888999999999999999999988887765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.79  E-value=0.0012  Score=35.15  Aligned_cols=24  Identities=38%  Similarity=0.767  Sum_probs=15.2

Q ss_pred             cccCcCcccccCcHhHHHHHHhhc
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      |.|+.|++.|...+.|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            456666666666666666666543

>PRK04860 hypothetical protein; Provisional

Probab=96.73  E-value=0.001  Score=53.65  Aligned_cols=39  Identities=28%  Similarity=0.564  Sum_probs=25.6

Q ss_pred             CcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccc
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKV  396 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  396 (410)
                      +|.|. |+.   ....+.+|.++|+++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            46676 665   5566667777777777777777777666543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.72  E-value=0.00098  Score=49.60  Aligned_cols=73  Identities=22%  Similarity=0.473  Sum_probs=19.5

Q ss_pred             ccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCC
Q psy12647        327 TCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQ  405 (410)
Q Consensus       327 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  405 (410)
                      +|..|+..|.+...|..|+...|.-.-+     ....+.....+..+++.-.. ..+.|.+|++.|.+...|..||+..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~~~-~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKKVK-ESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc-----cccccccccccccccccccC-CCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5888888888888888888777764432     22223355555555544322 3588888888888888888888854

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.62  E-value=0.0013  Score=34.53  Aligned_cols=23  Identities=26%  Similarity=0.701  Sum_probs=14.5

Q ss_pred             cccCcCcccccCcHhHHHHHHhhc
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      |+|+.|++... ..+|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777766 777777777654

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.60  E-value=0.0013  Score=35.62  Aligned_cols=24  Identities=33%  Similarity=0.785  Sum_probs=16.3

Q ss_pred             CcccccccCccCChhhHHHHHHhhc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      +|+|..|++.|.+...|..|+ ..|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~-~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHK-RSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHH-CTT
T ss_pred             CCCCCccCCccCChhHHHHHh-HHh
Confidence            466777777777777777776 444

>KOG2231|consensus

Probab=96.38  E-value=0.0026  Score=62.23  Aligned_cols=20  Identities=30%  Similarity=0.580  Sum_probs=11.2

Q ss_pred             cccccccCccCChhhHHHHH
Q psy12647        326 YTCHMCGHMFTCKRRLTQHL  345 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~  345 (410)
                      -.|..|...|-....|..|+
T Consensus       183 p~C~~C~~~fld~~el~rH~  202 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHL  202 (669)
T ss_pred             ccchhhhhhhccHHHHHHhh
Confidence            44555555555555555555

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.20  E-value=0.0024  Score=33.82  Aligned_cols=22  Identities=41%  Similarity=0.779  Sum_probs=13.7

Q ss_pred             cccCcCcccccCcHhHHHHHHh
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQ  376 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~  376 (410)
                      |.|++|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.87  E-value=0.0068  Score=37.41  Aligned_cols=40  Identities=15%  Similarity=0.301  Sum_probs=21.3

Q ss_pred             HHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCC
Q psy12647        212 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  251 (410)
Q Consensus       212 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  251 (410)
                      .+.+.....+.|-.|++|+..+....+|+.|+...++.+|
T Consensus        13 ~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   13 KKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ---CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3333344456677777887777777778777777666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2482|consensus

Probab=95.65  E-value=0.059  Score=47.75  Aligned_cols=23  Identities=17%  Similarity=0.059  Sum_probs=14.9

Q ss_pred             HHHHHhhcCCCcHHHHHHHHhhh
Q psy12647         13 MLMIMTRYSLPCVDFIQVHLRLH   35 (410)
Q Consensus        13 c~~~~c~~~~~~~~~l~~H~~~h   35 (410)
                      |..|.=-+-|+....+..|+..-
T Consensus        31 C~~C~e~f~~peq~~~l~Hl~~e   53 (423)
T KOG2482|consen   31 CLKCDEVFIFPEQKDCLAHLMSE   53 (423)
T ss_pred             eeehhhcccCcchHHHHHHHHhh
Confidence            55555455666767788898543

>smart00355 ZnF_C2H2 zinc finger

Probab=95.56  E-value=0.011  Score=31.29  Aligned_cols=24  Identities=42%  Similarity=0.920  Sum_probs=16.9

Q ss_pred             cccccccCccCChhhHHHHHHhhcC
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      |+|..|++.|.+...|..|+ ..|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~-~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHM-RTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHH-HHhc
Confidence            46777777777777777776 4553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.35  E-value=0.0084  Score=31.67  Aligned_cols=22  Identities=27%  Similarity=0.709  Sum_probs=19.5

Q ss_pred             eecccccccccCchhHHHHHHH
Q psy12647         89 FSCNSCGQTWLGYTSWKQHVAA  110 (410)
Q Consensus        89 ~~C~~C~~~f~~~~~l~~H~~~  110 (410)
                      |.|.+|+..|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            6799999999999999999865

>PRK04860 hypothetical protein; Provisional

Probab=95.32  E-value=0.008  Score=48.47  Aligned_cols=39  Identities=23%  Similarity=0.563  Sum_probs=33.0

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcH
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAY  368 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~  368 (410)
                      +|.|. |+.   ....+..|. .+|.++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~-ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHN-RVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHH-HHhcCCccEECCCCCceeEEec
Confidence            68898 887   667788997 9999999999999999887654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.30  E-value=0.011  Score=30.94  Aligned_cols=23  Identities=39%  Similarity=0.752  Sum_probs=14.6

Q ss_pred             cccccccCccCChhhHHHHHHhhc
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      |+|+.|+.... ...|..|++..|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777776 777777775444

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.23  E-value=0.0048  Score=33.40  Aligned_cols=21  Identities=33%  Similarity=0.765  Sum_probs=10.1

Q ss_pred             cccCcCcccccCcHhHHHHHH
Q psy12647        355 YPCTQCPGKFYSAYELRQHVR  375 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~  375 (410)
                      |.|..|++.|.+..+|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            344455555555444444443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.21  E-value=0.0058  Score=33.06  Aligned_cols=22  Identities=18%  Similarity=0.442  Sum_probs=20.7

Q ss_pred             ccCccccccccccccCccCCCC
Q psy12647        383 FPCPVCQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       383 ~~C~~C~~~f~~~~~l~~H~~~  404 (410)
                      |.|..|++.|++...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999975

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.85  E-value=0.01  Score=52.42  Aligned_cols=105  Identities=24%  Similarity=0.406  Sum_probs=60.7

Q ss_pred             ccccCcccccccccChhhHHHHHHcCCCCccccccc---CccC------ChhhHHHHHHhhcCCCCCc----ccCcCccc
Q psy12647        297 RYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCG---HMFT------CKRRLTQHLARLHTGSLSY----PCTQCPGK  363 (410)
Q Consensus       297 ~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~---~~f~------~~~~l~~H~~~~H~~~~~~----~C~~C~~~  363 (410)
                      .|.|+...|..+....-.|..|.+..+..+-|.+|-   +.|.      +...|..|. ..-..+..|    .|-.|...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~-~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHK-NGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccc-cCCccccCcCCCchhhhccce
Confidence            466666667777777777888887777666666664   2333      233455553 221112122    47777777


Q ss_pred             ccCcHhHHHHHHhhcCCCCccCccccc-------cccccccCccCCCCCC
Q psy12647        364 FYSAYELRQHVRQHTDERPFPCPVCQR-------TFRRKVCTTPSPQPQH  406 (410)
Q Consensus       364 f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~H  406 (410)
                      |.+-..|..|+|.-+.    .|-+|++       .|++-.+|..|.++.|
T Consensus       230 FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         230 FYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             ecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            7777777777765332    4444443       3555556666665555

>KOG1146|consensus

Probab=94.79  E-value=0.01  Score=61.75  Aligned_cols=97  Identities=20%  Similarity=0.312  Sum_probs=67.7

Q ss_pred             cccccccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcCCcccccccchh
Q psy12647        197 CHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLF  276 (410)
Q Consensus       197 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~  276 (410)
                      |.-|+..+.....+.-|+...++-.+.++|+.|++.|.....|..|++.-+.+...  ..|.                  
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~------------------  498 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCK------------------  498 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch--hHhH------------------
Confidence            44455666666777777777777778899999999999999999999985554322  2221                  


Q ss_pred             cccCchhhcccc-----cccCCCCcccccCcccccccccChhhHHHHHHc
Q psy12647        277 CLYFPQELISHS-----SYHGGEERRYVCNHMQCTRRFHSASLLARHVST  321 (410)
Q Consensus       277 ~~~~~~~l~~H~-----~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  321 (410)
                            ....|.     .+.....++|.|.  .|...+..+.+|.+|+..
T Consensus       499 ------~gq~~~~~arg~~~~~~~~p~~C~--~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  499 ------AGQNHPRLARGEVYRCPGKPYPCR--ACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ------hccccccccccccccCCCCcccce--eeeeeeecchHHHHHHHH
Confidence                  112222     1222234889999  999999999999999765

>KOG2231|consensus

Probab=94.13  E-value=0.085  Score=52.02  Aligned_cols=47  Identities=28%  Similarity=0.607  Sum_probs=29.7

Q ss_pred             ccCcccccccccChhhHHHHHHcCCCCcccccc------cCccCChhhHHHHHHhhc
Q psy12647        299 VCNHMQCTRRFHSASLLARHVSTHAIQYTCHMC------GHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       299 ~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~~H  349 (410)
                      .|.  .|...|.....|.+|++..+  |.|..|      +..|.....|..|.+.-|
T Consensus       184 ~C~--~C~~~fld~~el~rH~~~~h--~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCK--FCHERFLDDDELYRHLRFDH--EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cch--hhhhhhccHHHHHHhhccce--eheeecCcccccchhcccchHHHHHhhhcC
Confidence            455  67777777777777776664  444444      355666677777764444

>KOG2785|consensus

Probab=93.99  E-value=0.067  Score=48.38  Aligned_cols=52  Identities=21%  Similarity=0.417  Sum_probs=39.5

Q ss_pred             CcccccccccccChhHHHHHHhhhcCC----------------------CCccccCCCC---cccCCHHHHHHHHHH
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLARLHTG----------------------SLSYPCTQCP---GKFYSAYELRQHVRQ  245 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~~H~~----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~  245 (410)
                      |-.|-.|++.+.+...-..||...|+-                      ..-+.|-+|+   +.|.+..+.+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            567777888888888888888555542                      1236788888   999999999999876

>KOG1146|consensus

Probab=92.84  E-value=0.015  Score=60.72  Aligned_cols=77  Identities=22%  Similarity=0.381  Sum_probs=50.4

Q ss_pred             cccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHh-h------------------------cCCCC
Q psy12647        328 CHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQ-H------------------------TDERP  382 (410)
Q Consensus       328 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~-h------------------------~~~~~  382 (410)
                      |.-|+..+.+...+..|+...|...+.|+|+.|+-.|.+..+|..|||. |                        -+.++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            3334444555555555555555555666666666666666666666665 1                        13467


Q ss_pred             ccCccccccccccccCccCCCC
Q psy12647        383 FPCPVCQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       383 ~~C~~C~~~f~~~~~l~~H~~~  404 (410)
                      |.|..|.++++.+.+|..|++.
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            9999999999999999988764

>KOG2785|consensus

Probab=92.74  E-value=0.49  Score=43.01  Aligned_cols=25  Identities=24%  Similarity=0.557  Sum_probs=20.3

Q ss_pred             ceeecCcccccccccChhHHHHHHhhC
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTH  191 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~  191 (410)
                      ..|.|.  .|...|.+...-..|+++.
T Consensus         2 t~ftC~--tC~v~F~~ad~Qr~HyKSd   26 (390)
T KOG2785|consen    2 TGFTCN--TCNVEFDDADEQRAHYKSD   26 (390)
T ss_pred             Ccceee--ceeeeeccHHHHHHHhhhh
Confidence            357888  9999999998888888753

>KOG2482|consensus

Probab=92.68  E-value=0.17  Score=44.98  Aligned_cols=25  Identities=20%  Similarity=0.506  Sum_probs=17.7

Q ss_pred             cccccccCccCChhhHHHHHHhhcC
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      ..|-.|.....+...|..||..+|.
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe  304 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHE  304 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHH
Confidence            4677777777777777777766663

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.24  E-value=0.12  Score=27.19  Aligned_cols=19  Identities=37%  Similarity=0.840  Sum_probs=10.2

Q ss_pred             ccCcCcccccCcHhHHHHHH
Q psy12647        356 PCTQCPGKFYSAYELRQHVR  375 (410)
Q Consensus       356 ~C~~C~~~f~~~~~l~~H~~  375 (410)
                      .|+.|++.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4455555543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.18  E-value=0.084  Score=46.86  Aligned_cols=79  Identities=27%  Similarity=0.417  Sum_probs=44.2

Q ss_pred             eeecCcccccccccChhHHHHHHhhCCCCccccccc---ccccC------hhHHHHHHhhhcCCCCcc----ccCCCCcc
Q psy12647        166 RYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCG---HMFTC------KRRLTQHLARLHTGSLSY----PCTQCPGK  232 (410)
Q Consensus       166 ~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~---~~f~~------~~~l~~H~~~~H~~~~~~----~C~~C~~~  232 (410)
                      .|.|+...|+........|..|.++.+..+-|.+|-   +.|..      ...|..|. ..-..+.-|    .|.+|...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~-~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHK-NGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccc-cCCccccCcCCCchhhhccce
Confidence            467776667777666777888888877777777774   23322      23444443 221111111    35555555


Q ss_pred             cCCHHHHHHHHHH
Q psy12647        233 FYSAYELRQHVRQ  245 (410)
Q Consensus       233 f~~~~~l~~H~~~  245 (410)
                      |.....|..|++.
T Consensus       230 FYdDDEL~~HcR~  242 (493)
T COG5236         230 FYDDDELRRHCRL  242 (493)
T ss_pred             ecChHHHHHHHHh
Confidence            5555555555554

>KOG4124|consensus

Probab=91.74  E-value=0.078  Score=47.12  Aligned_cols=57  Identities=23%  Similarity=0.554  Sum_probs=45.1

Q ss_pred             CCcccCc--CcccccCcHhHHHHHHh-h--------------cC----CCCccCccccccccccccCccCCCCCCCCC
Q psy12647        353 LSYPCTQ--CPGKFYSAYELRQHVRQ-H--------------TD----ERPFPCPVCQRTFRRKVCTTPSPQPQHLDV  409 (410)
Q Consensus       353 ~~~~C~~--C~~~f~~~~~l~~H~~~-h--------------~~----~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  409 (410)
                      ++|.|++  |++...+.+.|..|... |              .+    .|+|.|++|.++++..-.|..|..-.|.++
T Consensus       348 ~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~~~s~~~~ph~~~~~~nk~~r~~i~~~~~k~~~~l~~~~~~~~~~~  425 (442)
T KOG4124|consen  348 KPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNGLKYHRTHSHLQV  425 (442)
T ss_pred             CCCCCCCCcchhhcccCcceeeccccCcCCCCCCCCCCCCCcceeeeccCcccChhhhhhhccCCCCCceeehhhhhh
Confidence            6688966  99999998888888643 2              11    368999999999998888888887777654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.69  E-value=0.17  Score=29.01  Aligned_cols=22  Identities=18%  Similarity=0.567  Sum_probs=14.0

Q ss_pred             CcccCcCcccccCcHhHHHHHH
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVR  375 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~  375 (410)
                      +|.|.+|+..|.+..++..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4566666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=90.54  E-value=0.15  Score=28.97  Aligned_cols=10  Identities=20%  Similarity=0.733  Sum_probs=5.3

Q ss_pred             CCcccCcCcc
Q psy12647        353 LSYPCTQCPG  362 (410)
Q Consensus       353 ~~~~C~~C~~  362 (410)
                      .++.||+|+.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4455555553

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.53  E-value=0.21  Score=28.67  Aligned_cols=21  Identities=29%  Similarity=0.679  Sum_probs=18.4

Q ss_pred             CcccccccCccCChhhHHHHH
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHL  345 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~  345 (410)
                      +|.|.+|+..|.+...+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            578999999999888888887

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.23  E-value=0.07  Score=51.39  Aligned_cols=61  Identities=26%  Similarity=0.463  Sum_probs=37.6

Q ss_pred             CcccccccccccChhHHHHHHhh-hcCCC--CccccC--CCCcccCCHHHHHHHHHHhcCCCCCCC
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLAR-LHTGS--LSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPC  254 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~-~H~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C  254 (410)
                      ++.|..|...|.....|..|.+. .|.++  .++.|+  .|++.|.....+..|...+.+..++.+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            45666666666666666666632 56666  666666  566666666666666666665555444

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=90.20  E-value=0.43  Score=36.01  Aligned_cols=25  Identities=28%  Similarity=0.506  Sum_probs=18.1

Q ss_pred             ccc----CcCcccccCcHhHHHHHHhhcC
Q psy12647        355 YPC----TQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       355 ~~C----~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      |.|    +.|++.+.+...|.+|++.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            677    7777777777777777776654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.96  E-value=0.13  Score=49.60  Aligned_cols=151  Identities=23%  Similarity=0.398  Sum_probs=113.2

Q ss_pred             CccccCCCCcccCCHHHHHHHHH--HhcCC--CCCCCc--cchhhhhhcCCcccccccchhcccCchhhcccccccCCCC
Q psy12647        222 LSYPCTQCPGKFYSAYELRQHVR--QHTDE--RPFPCP--VCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEE  295 (410)
Q Consensus       222 ~~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~  295 (410)
                      .++.|..|...|.....|..|..  .|..+  +++.|+  .|++.|....                 .+..|...+.+. 
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~-----------------~~~~~~~~~~~~-  349 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRND-----------------ALKRHILLHTSI-  349 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccc-----------------cccCCcccccCC-
Confidence            46899999999999999999999  79999  899999  7999999988                 899999988885 


Q ss_pred             cccccCcccccccccChhhHHHHH------HcCC-CCccccc--ccCccCChhhHHHHHHhhcCCCC--CcccCcCcccc
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHV------STHA-IQYTCHM--CGHMFTCKRRLTQHLARLHTGSL--SYPCTQCPGKF  364 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~------~~~~-~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~--~~~C~~C~~~f  364 (410)
                      .++.+....+...+.....-..+.      .... ..+.+..  |...+.....+..|. ..|...+  .+.+..|.+.|
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  428 (467)
T COG5048         350 SPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHI-ITHLSFRPYNCKNPPCSKSF  428 (467)
T ss_pred             CccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhcccccccccc-ccccccCCcCCCCCcchhhc
Confidence            666666556665555444321111      1111 4444444  667778888888886 7777766  46778899999


Q ss_pred             cCcHhHHHHHHhhcCCCCccCcccccc
Q psy12647        365 YSAYELRQHVRQHTDERPFPCPVCQRT  391 (410)
Q Consensus       365 ~~~~~l~~H~~~h~~~~~~~C~~C~~~  391 (410)
                      .....+..|++.|....++.|..++..
T Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  455 (467)
T COG5048         429 NRHYNLIPHKKIHTNHAPLLCSILKSF  455 (467)
T ss_pred             cCcccccccccccccCCceeecccccc
Confidence            999999999999988777666544443

>KOG2893|consensus

Probab=88.82  E-value=0.13  Score=43.11  Aligned_cols=48  Identities=25%  Similarity=0.621  Sum_probs=35.6

Q ss_pred             ecCcccccccccChhHHHHHHhhCCCCcccccccccccChhHHHHHHhhhcC
Q psy12647        168 VCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHT  219 (410)
Q Consensus       168 ~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  219 (410)
                      -|+  .|++.|.+...|+.|++.-+  |+|.+|.+..-+--.|..|.-.+|.
T Consensus        12 wcw--ycnrefddekiliqhqkakh--fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCW--YCNREFDDEKILIQHQKAKH--FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eee--ecccccchhhhhhhhhhhcc--ceeeeehhhhccCCCceeehhhhhh
Confidence            366  78888888888888887655  8888888877776667666545553

>KOG2893|consensus

Probab=87.74  E-value=0.19  Score=42.16  Aligned_cols=45  Identities=29%  Similarity=0.602  Sum_probs=34.0

Q ss_pred             cccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHH-HHhh
Q psy12647        328 CHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH-VRQH  377 (410)
Q Consensus       328 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h  377 (410)
                      |.+|++.|.+..-|.+|++.     +-|+|.+|-+..-+.-.|..| |++|
T Consensus        13 cwycnrefddekiliqhqka-----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceeehhhhh
Confidence            88888888888888888744     447888888877777777777 4444

>KOG4173|consensus

Probab=86.91  E-value=0.31  Score=40.10  Aligned_cols=80  Identities=23%  Similarity=0.516  Sum_probs=66.5

Q ss_pred             ceeecCcccccccccChhHHHHHHhhCCCCcccccccccccChhHHHHHHhhhcC---------CCCccccC--CCCccc
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHT---------GSLSYPCT--QCPGKF  233 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~---------~~~~~~C~--~C~~~f  233 (410)
                      ..+.|+...|...|.+......|..+-+ ...|..|.+.|++..-|..|+...|.         |...|+|-  -|+..|
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h-~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLH-GNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcc-cchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            5688998889999999999999876655 37899999999999999999977774         45568884  599999


Q ss_pred             CCHHHHHHHHHH
Q psy12647        234 YSAYELRQHVRQ  245 (410)
Q Consensus       234 ~~~~~l~~H~~~  245 (410)
                      .+...-..|+-.
T Consensus       157 kT~r~RkdH~I~  168 (253)
T KOG4173|consen  157 KTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhHHHH
Confidence            998888888654

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.67  E-value=0.11  Score=32.70  Aligned_cols=30  Identities=20%  Similarity=0.361  Sum_probs=21.2

Q ss_pred             CCCCCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        350 TGSLSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       350 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      .||--+.||.|+..|.+.....+|.+.-++
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            355567788888888777777777765554

>KOG4173|consensus

Probab=84.61  E-value=0.41  Score=39.40  Aligned_cols=80  Identities=23%  Similarity=0.513  Sum_probs=63.7

Q ss_pred             cccccCcccccccccChhhHHHHHHcCCCCcccccccCccCChhhHHHHHHhhc---------CCCCCcccCc--Ccccc
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLH---------TGSLSYPCTQ--CPGKF  364 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H---------~~~~~~~C~~--C~~~f  364 (410)
                      ..+.|....|...|.+......|....+ .-.|..|.+.|.+...|..|+..-|         .|...|.|-+  |+..|
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h-~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLH-GNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcc-cchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            5678888889999999988888854433 2479999999999999999984444         4567899954  99999


Q ss_pred             cCcHhHHHHHHh
Q psy12647        365 YSAYELRQHVRQ  376 (410)
Q Consensus       365 ~~~~~l~~H~~~  376 (410)
                      .+...-..|+..
T Consensus       157 kT~r~RkdH~I~  168 (253)
T KOG4173|consen  157 KTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhHHHH
Confidence            999999999753

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.06  E-value=0.68  Score=26.48  Aligned_cols=11  Identities=27%  Similarity=1.038  Sum_probs=6.6

Q ss_pred             cccccccCccC
Q psy12647        326 YTCHMCGHMFT  336 (410)
Q Consensus       326 ~~C~~C~~~f~  336 (410)
                      |.|..||..+.
T Consensus         3 ~~C~~CG~i~~   13 (34)
T cd00729           3 WVCPVCGYIHE   13 (34)
T ss_pred             EECCCCCCEeE
Confidence            56666665544

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=81.93  E-value=0.33  Score=41.61  Aligned_cols=43  Identities=19%  Similarity=0.419  Sum_probs=24.3

Q ss_pred             CCcccCcCcccccCcHhHHHHHHh---h-------cCCCC-----ccCcccccccccc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQ---H-------TDERP-----FPCPVCQRTFRRK  395 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~---h-------~~~~~-----~~C~~C~~~f~~~  395 (410)
                      +.+.||+|+..|..+.-+....+.   .       .+..|     ..|+.||++|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            345666666666665444444332   1       12233     5788888888755

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=81.73  E-value=2.5  Score=31.79  Aligned_cols=74  Identities=19%  Similarity=0.353  Sum_probs=44.7

Q ss_pred             ceeecCcccccccccChhHHHHHHhhCCCCcccccccccccChhHHHHHHhhhc-------------CC---------CC
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLH-------------TG---------SL  222 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-------------~~---------~~  222 (410)
                      +...|.  .|+..... +.+..|++..+....-       .....+.+-++..-             .+         -.
T Consensus        10 ~vlIC~--~C~~av~~-~~v~~HL~~~H~~~~~-------~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~   79 (109)
T PF12013_consen   10 RVLICR--QCQYAVQP-SEVESHLRKRHHILKS-------QERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYD   79 (109)
T ss_pred             CEEEeC--CCCcccCc-hHHHHHHHHhcccccH-------HHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCC
Confidence            567899  89988776 7899999854421100       00111111111100             00         02


Q ss_pred             cccc----CCCCcccCCHHHHHHHHHHhcC
Q psy12647        223 SYPC----TQCPGKFYSAYELRQHVRQHTD  248 (410)
Q Consensus       223 ~~~C----~~C~~~f~~~~~l~~H~~~~~~  248 (410)
                      -|.|    +.|++...+...|..|+..+++
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            2789    9999999999999999887764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	410
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-17
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-09
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-08
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		8e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-07
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		6e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 80/183 (43%), Gaps = 23/183 (12%)
Query: 215 ARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLR 274
           A L  G   Y C +C   F  +  L +H R HT E+P+ CP C ++F  K          
Sbjct: 13  AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK---------- 62
Query: 275 LFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCG 332
                  ++L  H   H GE + Y C   +C + F   + L  H  TH  +  Y C  CG
Sbjct: 63  -------KDLTRHQRTHTGE-KPYKC--PECGKSFSQRANLRAHQRTHTGEKPYACPECG 112
Query: 333 HMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTF 392
             F+    L  H  R HTG   Y C +C   F     L  H R HT E+P+ CP C ++F
Sbjct: 113 KSFSQLAHLRAHQ-RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF 171
Query: 393 RRK 395
            R+
Sbjct: 172 SRR 174

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 163 EERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           E R   C H  CT+ F   S + +H+ TH  + + C  CG  F    +L +H   +HTG 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQL-VHTGE 60
Query: 222 LSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTF 261
             + CT   C  +F   + LR HVR HT +RP+ CP   C + F
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 294 EERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           E R   C H  CT+ F   S + +H+ TH  + + C  CG  F    +L +H   +HTG 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQL-VHTGE 60
Query: 353 LSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTF 392
             + CT   C  +F   + LR HVR HT +RP+ CP   C + F
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
           Y C  CG  F+    L +H  R HTG   Y C +C   F  + +L++H R HT E+P+ C
Sbjct: 5   YKCPECGKSFSQSSNLQKH-QRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 255 PVCQRTFRR 263
           P C ++F R
Sbjct: 64  PECGKSFSR 72

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
           Y C  CG  F+    L +H  R HTG   Y C +C   F  + +L++H R HT E+P+ C
Sbjct: 5   YKCPECGKSFSQSSNLQKH-QRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 386 PVCQRTFRR 394
           P C ++F R
Sbjct: 64  PECGKSFSR 72

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 219 TGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCL 278
           +GS    C  C  KF S Y L+ H R+HT E+PF CP C + + RK              
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRK-------------- 48
Query: 279 YFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFT 336
              + L+ H + +       V     C   F     L  H+ +H   + Y C  C   F 
Sbjct: 49  ---ENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFM 105
Query: 337 CKRRLTQHLARLHTGSLS 354
            K+ L  H+ +LH+G  S
Sbjct: 106 QKKDLQSHMIKLHSGPSS 123

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 350 TGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
           +GS    C  C  KF S Y L+ H R+HT E+PF CP C + + RK
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRK 48

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 161 GGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKRRLTQHLAR 216
             E+R ++C +  C +R+   S L  H   H  +  Y C    C   F+   +L +H  R
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QR 59
Query: 217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC--PVCQRTFRR 263
            HTG   + C  C  KF  +  L+ H R HT E+PF C  P CQ+ F R
Sbjct: 60  RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR 108

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 292 GGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKRRLTQHLAR 347
             E+R ++C +  C +R+   S L  H   H  +  Y C    C   F+   +L +H  R
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QR 59
Query: 348 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC--PVCQRTFRR 394
            HTG   + C  C  KF  +  L+ H R HT E+PF C  P CQ+ F R
Sbjct: 60  RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR 108

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  +S L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 222 LSYPCTQCPGKFYSAYELRQHVRQH 246
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  +S L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 353 LSYPCTQCPGKFYSAYELRQHVRQH 377
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
           + C +CG  F+ K +L  H+ R HTG   Y C  C      +  L +H+R H+DERPF C
Sbjct: 9   HKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 255 PVCQRTFRR 263
            +C    R 
Sbjct: 68  QICPYASRN 76

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
           + C +CG  F+ K +L  H+ R HTG   Y C  C      +  L +H+R H+DERPF C
Sbjct: 9   HKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 386 PVCQRTFRR 394
            +C    R 
Sbjct: 68  QICPYASRN 76

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  ++ L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 222 LSYPCTQCPGKFYSAYELRQHVRQH 246
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  ++ L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 353 LSYPCTQCPGKFYSAYELRQHVRQH 377
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  ++ L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 222 LSYPCTQCPGKFYSAYELRQHVRQH 246
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  ++ L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 353 LSYPCTQCPGKFYSAYELRQHVRQH 377
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 188 VSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQ 245
            +TH   Y    CG  +T    L  HL R HTG   Y C    C  KF  + EL +H R+
Sbjct: 4   TATHTCDYA--GCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 60
Query: 246 HTDERPFPCPVCQRTFRR 263
           HT  RPF C  C R F R
Sbjct: 61  HTGHRPFQCQKCDRAFSR 78

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 319 VSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQ 376
            +TH   Y    CG  +T    L  HL R HTG   Y C    C  KF  + EL +H R+
Sbjct: 4   TATHTCDYA--GCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 60
Query: 377 HTDERPFPCPVCQRTFRR 394
           HT  RPF C  C R F R
Sbjct: 61  HTGHRPFQCQKCDRAFSR 78

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 222 LSYPCTQCPGKFYSAYELRQHVRQH 246
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 353 LSYPCTQCPGKFYSAYELRQHVRQH 377
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 188 VSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQ 245
            +TH   Y    CG  +T    L  HL R HTG   Y C    C  KF  + EL +H R+
Sbjct: 3   TATHTCDYA--GCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59
Query: 246 HTDERPFPCPVCQRTFRR 263
           HT  RPF C  C R F R
Sbjct: 60  HTGHRPFQCQKCDRAFSR 77

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 319 VSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQ 376
            +TH   Y    CG  +T    L  HL R HTG   Y C    C  KF  + EL +H R+
Sbjct: 3   TATHTCDYA--GCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59
Query: 377 HTDERPFPCPVCQRTFRR 394
           HT  RPF C  C R F R
Sbjct: 60  HTGHRPFQCQKCDRAFSR 77

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 222 LSYPCTQCPGKFYSAYELRQHVRQH 246
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 353 LSYPCTQCPGKFYSAYELRQHVRQH 377
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 59
Query: 222 LSYPCTQCPGKFYSAYELRQHVRQH 246
             + C  C  KF  + E ++H + H
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 59
Query: 353 LSYPCTQCPGKFYSAYELRQHVRQH 377
             + C  C  KF  + E ++H + H
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIH 84

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 200 CGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVC 257
           C  ++T    L  HL R HTG   Y CT   C  +F  + EL +H R+HT  +PF C VC
Sbjct: 23  CTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81
Query: 258 QRTFRR 263
            R+F R
Sbjct: 82  NRSFSR 87

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 331 CGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVC 388
           C  ++T    L  HL R HTG   Y CT   C  +F  + EL +H R+HT  +PF C VC
Sbjct: 23  CTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81
Query: 389 QRTFRR 394
            R+F R
Sbjct: 82  NRSFSR 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 222 LSYPCTQCPGKFYSAYELRQHVRQH 246
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60
Query: 353 LSYPCTQCPGKFYSAYELRQHVRQH 377
             + C  C  KF  + E ++H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 200 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR 259
           C   F+ K  L  H+ R+HTG   + C  C   F     L QH+R HT E+PF C +C R
Sbjct: 12  CDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGR 70
Query: 260 TF 261
            F
Sbjct: 71  KF 72

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 331 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR 390
           C   F+ K  L  H+ R+HTG   + C  C   F     L QH+R HT E+PF C +C R
Sbjct: 12  CDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGR 70
Query: 391 TF 392
            F
Sbjct: 71  KF 72

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 227 TQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELIS 286
             C   +   ++L+ H+ +HT E+PFPC       + +G E    SL          L  
Sbjct: 18  ADCGAAYNKNWKLQAHLCKHTGEKPFPC-------KEEGCEKGFTSL--------HHLTR 62
Query: 287 HSSYHGGEERRYVCNHMQCTRRFHSASLLARHVST-HAIQ---YTCHM--CGHMFTCKRR 340
           HS  H G E+ + C+   C  RF + + + +H +  H I+   Y CH   CG  F    +
Sbjct: 63  HSLTHTG-EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 341 LTQHLARLHTGSLSYPC--TQCPGKFYSAYELRQHVRQHTDERPFPC 385
           L  H    HT  L Y C    C  +F     L++H + H     +PC
Sbjct: 122 LKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC 164

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 200 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR 259
           C   F+ K  L  H+ R+HTG   + C  C   F     L  H+R HT E+PF C +C R
Sbjct: 12  CDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGR 70
Query: 260 TF 261
            F
Sbjct: 71  KF 72

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 331 CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR 390
           C   F+ K  L  H+ R+HTG   + C  C   F     L  H+R HT E+PF C +C R
Sbjct: 12  CDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGR 70
Query: 391 TF 392
            F
Sbjct: 71  KF 72

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
           + C +CG  F     L+ HL  +H+ +  YPC  C  +F+   ++++H   HT E+P  C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 255 PVCQRTF 261
            VC + F
Sbjct: 61  QVCGKAF 67

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
           + C +CG  F     L+ HL  +H+ +  YPC  C  +F+   ++++H   HT E+P  C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 386 PVCQRTF 392
            VC + F
Sbjct: 61  QVCGKAF 67

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 28/143 (19%)
Query: 200 CGHMFTCKRRLTQHLARLHTGS---LSYPC--TQCP--GK-FYSAYELRQHVRQHTDERP 251
           C   F+    L  H+   H G     ++ C   +CP  GK F + Y+L  H+R HT E+P
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 252 FPCPV--CQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRF 309
           FPCP   C + F R                  + L  H   H G E+ + C    C RRF
Sbjct: 91  FPCPFPGCGKIFARS-----------------ENLKIHKRTHTG-EKPFKCEFEGCDRRF 132
Query: 310 HSASLLARHVSTHAIQYTCHMCG 332
            ++S   +H+  H    +    G
Sbjct: 133 ANSSDRKKHMHVHTSDKSGPSSG 155

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 305 CTRRFHSASLLARHVSTHAI---QYTCHMC--------GHMFTCKRRLTQHLARLHTGSL 353
           C R F +   L  HV+   +   +   H+C        G  F  K +L  H+ R+HTG  
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEK 89
Query: 354 SYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTF 392
            +PC    C   F  +  L+ H R HT E+PF C    C R F
Sbjct: 90  PFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF 132

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 65/167 (38%), Gaps = 32/167 (19%)
Query: 169 CNHMQCTRRFHSASLLARHVSTHAI-----QYTCHMCG-----HMFTCKRRLTQHLARLH 218
           C    C++ F S   L  H+++  I     ++ CH  G       F  +  L  H+ R H
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-H 62
Query: 219 TGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCP--VCQRTFRRKGLESFTFSLR 274
           TG   + CT   C   +     L+ H+R HT E+P+ C    C + F             
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSN----------- 111
Query: 275 LFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVST 321
                   +   H +     E+ YVC    CT+R+   S L +HV T
Sbjct: 112 ------ASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 223 SYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGL 266
           S+ C  C   F     L++H R HT+E+P+PC +C R F R+ L
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDL 45

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 354 SYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
           S+ C  C   F     L++H R HT+E+P+PC +C R F R+
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR 43

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	410
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-17
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 98.3 bits (246), Expect = 2e-24
 Identities = 64/211 (30%), Positives = 89/211 (42%), Gaps = 30/211 (14%)

Query: 178 FHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FY 234
              +S      +    +  Y C  CG  F+    L +H  R HTG   Y C +C GK F 
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPEC-GKSFS 60

Query: 235 SAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGE 294
              +L +H R HT E+P+ CP C ++F ++                   L +H   H G 
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRA-----------------NLRAHQRTHTG- 102

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           E+ Y C   +C + F   + L  H  TH  +  Y C  CG  F+ +  L  H  R HTG 
Sbjct: 103 EKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ-RTHTGE 159

Query: 353 LSYPCTQCPGK-FYSAYELRQHVRQHTDERP 382
             Y C +C GK F     L  H R HT ++ 
Sbjct: 160 KPYKCPEC-GKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 97.1 bits (243), Expect = 6e-24
 Identities = 60/195 (30%), Positives = 80/195 (41%), Gaps = 26/195 (13%)

Query: 204 FTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 263
                        L  G   Y C +C   F  +  L +H R HT E+P+ CP C ++F  
Sbjct: 3   EFGSSSSVAQA-ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 264 KGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA 323
           K                  +L  H   H GE + Y C   +C + F   + L  H  TH 
Sbjct: 62  KK-----------------DLTRHQRTHTGE-KPYKCP--ECGKSFSQRANLRAHQRTHT 101

Query: 324 IQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDE 380
            +  Y C  CG  F+    L  H  R HTG   Y C +C GK F     L  H R HT E
Sbjct: 102 GEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPEC-GKSFSREDNLHTHQRTHTGE 159

Query: 381 RPFPCPVCQRTFRRK 395
           +P+ CP C ++F R+
Sbjct: 160 KPYKCPECGKSFSRR 174

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 65.2 bits (160), Expect = 1e-12
 Identities = 59/240 (24%), Positives = 80/240 (33%), Gaps = 77/240 (32%)

Query: 29  QVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKT 88
                L  GE+ + C  C                   G + S   HL +H  + H   K 
Sbjct: 10  VAQAALEPGEKPYACPEC-------------------GKSFSRSDHLAEH-QRTHTGEKP 49

Query: 89  FSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLY 148
           + C  CG++                               FS +                
Sbjct: 50  YKCPECGKS-------------------------------FSDKKD-------------- 64

Query: 149 FPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTC 206
               L  H   H G E+ Y C   +C + F   + L  H  TH  +  Y C  CG  F+ 
Sbjct: 65  ----LTRHQRTHTG-EKPYKCP--ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQ 117

Query: 207 KRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG 265
              L  H  R HTG   Y C +C GK F     L  H R HT E+P+ CP C ++F R+ 
Sbjct: 118 LAHLRAHQ-RTHTGEKPYKCPEC-GKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRD 175

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 80.7 bits (200), Expect = 4e-18
 Identities = 52/237 (21%), Positives = 78/237 (32%), Gaps = 58/237 (24%)

Query: 154 ISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQH 213
           +   +      +RY+C+                             CG  +    +L  H
Sbjct: 1   MGEKALPVVY-KRYICSFAD--------------------------CGAAYNKNWKLQAH 33

Query: 214 LARLHTGSLSYPCTQCP-GK-FYSAYELRQHVRQHTDERPFPC--PVCQRTFRRKGLESF 269
           L   HTG   +PC +    K F S + L +H   HT E+ F C    C   F  K     
Sbjct: 34  L-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA---- 88

Query: 270 TFSLRLFCLYFPQELISHSSYHGGEERR-YVCNHMQCTRRFHSASLLARHVSTHAIQ--Y 326
                         +  H +     +   YVC+   C + F   + L  H  +H  Q  Y
Sbjct: 89  -------------NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY 135

Query: 327 TCH--MCGHMFTCKRRLTQHLARLHTGSLSYPCTQCP--GKFYSAYELRQHVRQHTD 379
            C    C   F+   RL +H  ++H G        C   GK ++ Y L+     H D
Sbjct: 136 ECPHEGCDKRFSLPSRLKRH-EKVHAGYPCKKDDSCSFVGKTWTLY-LKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 47/193 (24%), Positives = 72/193 (37%), Gaps = 36/193 (18%)

Query: 216 RLHTGSLSYPC--TQCPGK-FYSAYELRQHVRQHTDERPFPC--PVCQRTFRRKGLESFT 270
            L      Y C    C G  +   ++L+ H+ +HT E+PFPC    C++ F         
Sbjct: 5   ALPVVYKRYICSFADC-GAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLH----- 58

Query: 271 FSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH----AIQY 326
                        L  HS  H GE + + C+   C  RF + + + +H +         Y
Sbjct: 59  ------------HLTRHSLTHTGE-KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVY 105

Query: 327 TCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQCP-GK-FYSAYELRQHVRQHT---D 379
            CH   CG  F    +L  H    HT  L Y C      K F     L++H + H     
Sbjct: 106 VCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 164

Query: 380 ERPFPCPVCQRTF 392
           ++   C    +T+
Sbjct: 165 KKDDSCSFVGKTW 177

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.1 bits (162), Expect = 6e-13
 Identities = 37/168 (22%), Positives = 55/168 (32%), Gaps = 33/168 (19%)

Query: 241 QHVRQHTDERPFPC--PVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRY 298
                    + + C    C   + +                   +L +H   H GE + +
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNW-----------------KLQAHLCKHTGE-KPF 43

Query: 299 VCNHMQCTRRFHSASLLARHVSTHAIQ--YTC--HMCGHMFTCKRRLTQHLARLHTG--S 352
            C    C + F S   L RH  TH  +  +TC    C   FT K  + +H          
Sbjct: 44  PCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF-NRFHNIKI 102

Query: 353 LSYPCT--QCPGK-FYSAYELRQHVRQHTDERPFPC--PVCQRTFRRK 395
             Y C    C GK F    +L+ H   HT + P+ C    C + F   
Sbjct: 103 CVYVCHFENC-GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP 149

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 46/242 (19%), Positives = 72/242 (29%), Gaps = 78/242 (32%)

Query: 31  HLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKTFS 90
              L    +R+ C +                 C  G+A +    L+ H    H   K F 
Sbjct: 3   EKALPVVYKRYICSFAD---------------C--GAAYNKNWKLQAH-LCKHTGEKPFP 44

Query: 91  CNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFP 150
           C   G                             C++ F++                   
Sbjct: 45  CKEEG-----------------------------CEKGFTSLHH---------------- 59

Query: 151 QELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH----AIQYTCHM--CGHMF 204
             L  HS  H G E+ + C+   C  RF + + + +H +         Y CH   CG  F
Sbjct: 60  --LTRHSLTHTG-EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAF 116

Query: 205 TCKRRLTQHLARLHTGSLSYPCTQCP-GK-FYSAYELRQHVRQHT---DERPFPCPVCQR 259
               +L  H    HT  L Y C      K F     L++H + H     ++   C    +
Sbjct: 117 KKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGK 175

Query: 260 TF 261
           T+
Sbjct: 176 TW 177

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 51/227 (22%), Positives = 73/227 (32%), Gaps = 74/227 (32%)

Query: 29  QVHLRLHSGERRFPCEYCSLLVYPVLILFRFIFVCTQGSADSHKHHLKDHVNKIHLHPKT 88
           Q HL  H+GE+ FPC+                  C      +  HHL  H    H   K 
Sbjct: 31  QAHLCKHTGEKPFPCKEEG---------------C--EKGFTSLHHLTRHS-LTHTGEKN 72

Query: 89  FSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLY 148
           F+C+S G                             CD RF+T+                
Sbjct: 73  FTCDSDG-----------------------------CDLRFTTK---------------- 87

Query: 149 FPQELISHSSYHGGEERR-YVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCH--MCGHM 203
               +  H +     +   YVC+   C + F   + L  H  +H  Q  Y C    C   
Sbjct: 88  --ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR 145

Query: 204 FTCKRRLTQHLARLHTGSLSYPCTQCP--GKFYSAYELRQHVRQHTD 248
           F+   RL +H  ++H G        C   GK ++ Y L+     H D
Sbjct: 146 FSLPSRLKRH-EKVHAGYPCKKDDSCSFVGKTWTLY-LKHVAECHQD 190

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 73.8 bits (182), Expect = 5e-16
 Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 33/171 (19%)

Query: 195 YTCHMCGHMFTCKRRLTQHLA--RLHTGSLSYPCTQC----PGK-FYSAYELRQHVRQHT 247
                C   F  + +L  H+    +H     + C         + F + Y L  H+R+HT
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 248 DERPFPCPV--CQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQC 305
            E+P  C    C++++ R                    L +H   H G E+ Y+C H  C
Sbjct: 64  GEKPHKCTFEGCRKSYSRLE-----------------NLKTHLRSHTG-EKPYMCEHEGC 105

Query: 306 TRRFHSASLLARHVS-THAIQ--YTCHM--CGHMFTCKRRLTQHLARLHTG 351
           ++ F +AS  A+H + TH+ +  Y C +  C   +T    L +H+ +   G
Sbjct: 106 SKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV-KTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 19/115 (16%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-----YTCHMCGHM-----FTCKRRLTQH 344
           E     +   C++ F S   L  H+++  I      + CH  G       F  +  L  H
Sbjct: 1   ETDCRWD--GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 345 LARLHTGSLSYPCT--QCPGKFYSAYE-LRQHVRQHTDERPFPC--PVCQRTFRR 394
           + R HTG   + CT   C  K YS  E L+ H+R HT E+P+ C    C + F  
Sbjct: 59  M-RRHTGEKPHKCTFEGC-RKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSN 111

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 48/179 (26%)

Query: 224 YPCTQCPGKFYSAYELRQHVRQ---HTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYF 280
                C  +F S  +L  H+     H + + F C     +   +      F  +      
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELR-----PFKAQ------ 52

Query: 281 PQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRR 340
              L+ H   H GE + + C    C + +     L  H+                     
Sbjct: 53  -YMLVVHMRRHTGE-KPHKCTFEGCRKSYSRLENLKTHL--------------------- 89

Query: 341 LTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQH-VRQHTDERPFPCPV--CQRTFRR 394
                 R HTG   Y C    C   F +A +  +H  R H++E+P+ C +  C + +  
Sbjct: 90  ------RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD 142

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 50.7 bits (122), Expect = 7e-08
 Identities = 48/209 (22%), Positives = 71/209 (33%), Gaps = 65/209 (31%)

Query: 120 FPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFH 179
                C + F +++ L     S  +               HG   + +VC+   C+R   
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHI---------------HGE-RKEFVCHWGGCSR--- 44

Query: 180 SASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAY 237
                                   F  +  L  H+ R HTG   + CT   C  K YS  
Sbjct: 45  --------------------ELRPFKAQYMLVVHM-RRHTGEKPHKCTFEGC-RKSYSRL 82

Query: 238 E-LRQHVRQHTDERPFPC--PVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSY-HGG 293
           E L+ H+R HT E+P+ C    C + F                     +   H +  H  
Sbjct: 83  ENLKTHLRSHTGEKPYMCEHEGCSKAFSNAS-----------------DRAKHQNRTHSN 125

Query: 294 EERRYVCNHMQCTRRFHSASLLARHVSTH 322
            E+ YVC    CT+R+   S L +HV T 
Sbjct: 126 -EKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 39/166 (23%)

Query: 70  SHKHHLKDHVNKIHLHP--KTFSCNSCGQTWLGYTSWKQHVAACREKRRKET------FP 121
             +  L  H+N  H+H   K F C+  G +       +   A                  
Sbjct: 14  DSQEQLVHHINSEHIHGERKEFVCHWGGCSREL----RPFKAQYMLVVHMRRHTGEKPHK 69

Query: 122 CKR--CDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFH 179
           C    C + +S  + L                   +H   H GE + Y+C H  C++ F 
Sbjct: 70  CTFEGCRKSYSRLENL------------------KTHLRSHTGE-KPYMCEHEGCSKAFS 110

Query: 180 SASLLARHVS-THAIQ--YTCHM--CGHMFTCKRRLTQHLARLHTG 220
           +AS  A+H + TH+ +  Y C +  C   +T    L +H+ +   G
Sbjct: 111 NASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV-KTVHG 155

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 71.8 bits (177), Expect = 1e-15
 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 25/139 (17%)

Query: 218 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFC 277
            +GS    C  C  KF S Y L+ H R+HT E+PF CP C + + RK             
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKE------------ 49

Query: 278 LYFPQELISH---SSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCG 332
                 L+ H   +  +   E+ + C+   C   F     L  H+ +H  +  Y C  C 
Sbjct: 50  -----NLLEHEARNCMNRS-EQVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKCSSCS 101

Query: 333 HMFTCKRRLTQHLARLHTG 351
             F  K+ L  H+ +LH+G
Sbjct: 102 QQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 64.8 bits (159), Expect = 4e-13
 Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQH--LARLHT 219
                C    C ++F S   L  H   H  +  + C  CG  +  K  L +H     ++ 
Sbjct: 5   SSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 220 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG 265
               + C+ C   F    ELR H+  HT E P+ C  C + F +K 
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKK 108

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 64.4 bits (158), Expect = 5e-13
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 6/105 (5%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQH--LARLHT 350
                C    C ++F S   L  H   H  +  + C  CG  +  K  L +H     ++ 
Sbjct: 5   SSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 351 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
               + C+ C   F    ELR H+  HT E P+ C  C + F +K
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK 107

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 50.2 bits (121), Expect = 6e-08
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-----YTCHMCGHMFTCK 207
           L  H+  H GE + + C   +C + +     L  H + + +      +TC +C   F  +
Sbjct: 23  LKVHNRKHTGE-KPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR 79

Query: 208 RRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH-VRQHTDER 250
             L  H+   HTG + Y C+ C  +F    +L+ H ++ H+   
Sbjct: 80  MELRLHM-VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 21/47 (44%), Positives = 27/47 (57%)

Query: 349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
            +GS    C  C  KF S Y L+ H R+HT E+PF CP C + + RK
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRK 48

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 37/143 (25%)

Query: 87  KTFSCNSCGQTWLGYTSWKQHVAACREKRRKET----FPCKRCDERFSTRDGLESFTFSL 142
               C +C + +L     K H        RK T    F C +C + +  ++ L       
Sbjct: 6   SGVECPTCHKKFLSKYYLKVH-------NRKHTGEKPFECPKCGKCYFRKENL------- 51

Query: 143 RLFCLYFPQELISH---SSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTC 197
                      + H   +  +  E + + C+   C   F     L  H+ +H  +  Y C
Sbjct: 52  -----------LEHEARNCMNRSE-QVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKC 97

Query: 198 HMCGHMFTCKRRLTQHLARLHTG 220
             C   F  K+ L  H+ +LH+G
Sbjct: 98  SSCSQQFMQKKDLQSHMIKLHSG 120

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 67.5 bits (166), Expect = 4e-14
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 163 EERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           E R   C H  CT+ F   S + +H+ TH  + + C  CG  F    +L +H   +HTG 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQ-LVHTGE 60

Query: 222 LSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTFRRKG 265
             + CT   C  +F   + LR HVR HT +RP+ CP   C + F +  
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST 108

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 67.2 bits (165), Expect = 6e-14
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 294 EERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           E R   C H  CT+ F   S + +H+ TH  + + C  CG  F    +L +H   +HTG 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQ-LVHTGE 60

Query: 353 LSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTFRRK 395
             + CT   C  +F   + LR HVR HT +RP+ CP   C + F + 
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 107

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 56.4 bits (137), Expect = 4e-10
 Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 30/144 (20%)

Query: 248 DERPFPCPV--CQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQC 305
           + R   CP   C + FR                     +  H   HG   R +VC   +C
Sbjct: 2   EPRTIACPHKGCTKMFRDNS-----------------AMRKHLHTHG--PRVHVCA--EC 40

Query: 306 TRRFHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPC--TQ 359
            + F  +S L RH   H  +  + C    CG  F+    L  H+ R+HTG   Y C    
Sbjct: 41  GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDG 99

Query: 360 CPGKFYSAYELRQHVRQHTDERPF 383
           C  KF  +  L+ H+  H   +  
Sbjct: 100 CNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 52.1 bits (126), Expect = 1e-08
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 11/106 (10%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKR 208
           +  H   HG   R +VC   +C + F  +S L RH   H  +  + C    CG  F+   
Sbjct: 23  MRKHLHTHG--PRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF 78

Query: 209 RLTQHLARLHTGSLSYPC--TQCPGKFYSAYELRQHVRQHTDERPF 252
            L  H+ R+HTG   Y C    C  KF  +  L+ H+  H   +  
Sbjct: 79  NLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 68.1 bits (167), Expect = 6e-14
 Identities = 38/198 (19%), Positives = 65/198 (32%), Gaps = 58/198 (29%)

Query: 201 GHMFTCKRRLTQHLA--RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF------ 252
           G   +  + + Q L+   +    LS P   C   F + +EL  HV       P       
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 253 ---PCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRF 309
               CP   ++F+ K                  +L++H   H G E+ + C    C + F
Sbjct: 61  YWEECPREGKSFKAKY-----------------KLVNHIRVHTG-EKPFPCPFPGCGKIF 102

Query: 310 HSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSA 367
             +  L  H                            R HTG   + C    C  +F ++
Sbjct: 103 ARSENLKIHK---------------------------RTHTGEKPFKCEFEGCDRRFANS 135

Query: 368 YELRQHVRQHTDERPFPC 385
            + ++H+  HT ++  P 
Sbjct: 136 SDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 37/161 (22%), Positives = 55/161 (34%), Gaps = 35/161 (21%)

Query: 178 FHSASLLARHVSTHAI-----QYTCHMCGHMFTCKRRLTQHLARLHTG---------SLS 223
             S   + + +S   I           C   F+    L  H+  +               
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVCYW 62

Query: 224 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTFRRKGLESFTFSLRLFCLYFP 281
             C +    F + Y+L  H+R HT E+PFPCP   C + F R                  
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSE---------------- 106

Query: 282 QELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH 322
             L  H   H G E+ + C    C RRF ++S   +H+  H
Sbjct: 107 -NLKIHKRTHTG-EKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 17/102 (16%)

Query: 309 FHSASLLARHVSTHAI-----QYTCHMCGHMFTCKRRLTQHLARLHTG---------SLS 354
             S   + + +S   I           C   F+    L  H+  +               
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVCYW 62

Query: 355 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTFRR 394
             C +    F + Y+L  H+R HT E+PFPCP   C + F R
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.1 bits (123), Expect = 4e-08
 Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 31/162 (19%)

Query: 105 KQHVAACREKRRKETFPCKRCDERFSTRDGLESFTFSLRLFCLYFPQELISHSSYHGGE- 163
           KQ ++       + + P K CD  FST                    EL++H +      
Sbjct: 11  KQELSCKWIDEAQLSRPKKSCDRTFSTMH------------------ELVTHVTMEHVGG 52

Query: 164 --ERRYVCNHMQCTRR---FHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKRRLTQHL 214
             +  +VC   +C R    F +   L  H+  H  +  + C    CG +F     L  H 
Sbjct: 53  PEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112

Query: 215 ARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPC 254
            R HTG   + C    C  +F ++ + ++H+  HT ++  P 
Sbjct: 113 -RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 332 GHMFTCKRRLTQHLA--RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF------ 383
           G   +  + + Q L+   +    LS P   C   F + +EL  HV       P       
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 384 ---PCPVCQRTFRRK 395
               CP   ++F+ K
Sbjct: 61  YWEECPREGKSFKAK 75

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.8 bits (159), Expect = 4e-13
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKRRLTQHLARLHT 219
           +R ++C +  C +R+   S L  H   H  +  Y C    C   F+   +L +H  R HT
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-RRHT 62

Query: 220 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC--PVCQRTFRRKG 265
           G   + C  C  KF  +  L+ H R HT E+PF C  P CQ+ F R  
Sbjct: 63  GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSD 110

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.1 bits (157), Expect = 7e-13
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 7/107 (6%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKRRLTQHLARLHT 350
           +R ++C +  C +R+   S L  H   H  +  Y C    C   F+   +L +H  R HT
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-RRHT 62

Query: 351 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC--PVCQRTFRRK 395
           G   + C  C  KF  +  L+ H R HT E+PF C  P CQ+ F R 
Sbjct: 63  GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARS 109

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 23/132 (17%)

Query: 195 YTC--HMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDER 250
           + C    C   +     L  H  R HTG   Y C    C  +F  + +L++H R+HT  +
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65

Query: 251 PFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFH 310
           PF C  CQR F R                    L +H+  H G E+ + C    C ++F 
Sbjct: 66  PFQCKTCQRKFSRSD-----------------HLKTHTRTHTG-EKPFSCRWPSCQKKFA 107

Query: 311 SASLLARHVSTH 322
            +  L RH + H
Sbjct: 108 RSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 25/137 (18%)

Query: 247 TDERPFPC--PVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQ 304
           +++RPF C  P C + + +                    L  HS  H GE + Y C+   
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLS-----------------HLQMHSRKHTGE-KPYQCDFKD 43

Query: 305 CTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPC--TQC 360
           C RRF  +  L RH   H     + C  C   F+    L  H  R HTG   + C    C
Sbjct: 44  CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPSC 102

Query: 361 PGKFYSAYELRQHVRQH 377
             KF  + EL +H   H
Sbjct: 103 QKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 52.9 bits (128), Expect = 5e-09
 Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRL 210
           L  HS  H GE + Y C+   C RRF  +  L RH   H     + C  C   F+    L
Sbjct: 24  LQMHSRKHTGE-KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL 82

Query: 211 TQHLARLHTGSLSYPC--TQCPGKFYSAYELRQHVRQH 246
             H  R HTG   + C    C  KF  + EL +H   H
Sbjct: 83  KTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPF 252
                CG  +T    L  HL R HTG   Y C    C  KF  + EL +H R+HT  RPF
Sbjct: 8   CDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 253 PCPVCQRTFRR 263
            C  C R F R
Sbjct: 67  QCQKCDRAFSR 77

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPF 383
                CG  +T    L  HL R HTG   Y C    C  KF  + EL +H R+HT  RPF
Sbjct: 8   CDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 384 PCPVCQRTFRR 394
            C  C R F R
Sbjct: 67  QCQKCDRAFSR 77

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 21/102 (20%), Positives = 32/102 (31%), Gaps = 20/102 (19%)

Query: 245 QHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQ 304
           + T         C +T+ +                    L +H   H GE + Y C+   
Sbjct: 1   KRTATHTCDYAGCGKTYTKSS-----------------HLKAHLRTHTGE-KPYHCDWDG 42

Query: 305 CTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRLTQH 344
           C  +F  +  L RH   H     + C  C   F+    L  H
Sbjct: 43  CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRL 210
           L +H   H GE + Y C+   C  +F  +  L RH   H     + C  C   F+    L
Sbjct: 23  LKAHLRTHTGE-KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL 81

Query: 211 TQH 213
             H
Sbjct: 82  ALH 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 58.2 bits (142), Expect = 4e-11
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 291 HGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARL 348
            G     + C    C + F     L  H+  H     Y C  C +       L +HL R+
Sbjct: 3   SGSS-GPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RI 58

Query: 349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
           H+    + C  CP    ++ +L  H+R HT +     
Sbjct: 59  HSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 57.0 bits (139), Expect = 1e-10
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
           + C +CG  F+ K +L  H+ R HTG   Y C  C      +  L +H+R H+DERPF C
Sbjct: 9   HKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67

Query: 255 PVCQRTFRRK 264
            +C    R  
Sbjct: 68  QICPYASRNS 77

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 57.0 bits (139), Expect = 1e-10
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
           + C +CG  F+ K +L  H+ R HTG   Y C  C      +  L +H+R H+DERPF C
Sbjct: 9   HKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67

Query: 386 PVCQRTFRRK 395
            +C    R  
Sbjct: 68  QICPYASRNS 77

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 46.3 bits (111), Expect = 7e-07
 Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 22/106 (20%)

Query: 218 HTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLF 276
              S  + C  C GK F    +L+ H+R HT  +P+ C  C                   
Sbjct: 3   SGSSGPHKCEVC-GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSS----------- 50

Query: 277 CLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH 322
                  L  H   H   ER + C    C     ++S L  H+ +H
Sbjct: 51  ------SLNKHLRIHSD-ERPFKCQ--ICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 39.7 bits (94), Expect = 1e-04
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRL 210
           L +H   H G  + Y C    C      +S L +H+  H+ +  + C +C +      +L
Sbjct: 24  LKTHMRCHTGV-KPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL 80

Query: 211 TQHLARLHTGSLSYPC 226
           T HL R HTG      
Sbjct: 81  TVHL-RSHTGDSGPSS 95

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60

Query: 222 LSYPCTQCPGKFYSAYELRQHVRQHTDER 250
             + C  C  KF  + E ++H + H  ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ER Y C    C RRF  +  L RH+  H  Q  + C +C   F+    LT H+ R HTG 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGE 60

Query: 353 LSYPCTQCPGKFYSAYELRQHVRQHTDER 381
             + C  C  KF  + E ++H + H  ++
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.0 bits (131), Expect = 1e-09
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 326 YTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF 383
           Y C +  C   F+    LT+H+ R+HTG   + C  C   F  +  L  H+R HT E+PF
Sbjct: 5   YACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63

Query: 384 PCPVCQRTFRR 394
            C +C R F R
Sbjct: 64  ACDICGRKFAR 74

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 22/101 (21%)

Query: 224 YPC--TQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFP 281
           Y C    C  +F  +  L +H+R HT ++PF C +C R F R                  
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSD---------------- 48

Query: 282 QELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH 322
             L +H   H G E+ + C+   C R+F  +    RH   H
Sbjct: 49  -HLTTHIRTHTG-EKPFACD--ICGRKFARSDERKRHTKIH 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 58.2 bits (142), Expect = 7e-11
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
           ++ Y C   QC + F   S   RH+S H     Y C +CG  F  K  L  H+ ++HTG 
Sbjct: 8   DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHTGI 63

Query: 222 LSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 264
             Y C  C  +F       +HV   +  + +     ++     
Sbjct: 64  KPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 58.2 bits (142), Expect = 7e-11
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
           ++ Y C   QC + F   S   RH+S H     Y C +CG  F  K  L  H+ ++HTG 
Sbjct: 8   DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHTGI 63

Query: 353 LSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
             Y C  C  +F       +HV   +  + +     ++     
Sbjct: 64  KPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 54.8 bits (133), Expect = 9e-10
 Identities = 33/128 (25%), Positives = 46/128 (35%), Gaps = 23/128 (17%)

Query: 216 RLHTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLR 274
              +G   YPC QC GK F    +  +H+  H   RP+ C VC + F+ K          
Sbjct: 3   SGSSGDKLYPC-QC-GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKH--------- 51

Query: 275 LFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHM 334
                    L+ H   H G  + Y CN   C +RF       RHV++    Y        
Sbjct: 52  --------HLVGHMKIHTGI-KPYECN--ICAKRFMWRDSFHRHVTSCTKSYEAAKAEQN 100

Query: 335 FTCKRRLT 342
            T     +
Sbjct: 101 TTEASGPS 108

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 57.1 bits (139), Expect = 1e-10
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 8/105 (7%)

Query: 284 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRL 341
                     + + ++C    C R F  +  L  H  TH  +  YTC +C   F  +  L
Sbjct: 5   SSGGRLPSKTK-KEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 342 TQHLARLHTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFPC 385
             H   +H+    + C +C GK F  +  L  H   H        
Sbjct: 62  RDHR-YIHSKEKPFKCQEC-GKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 54.7 bits (133), Expect = 8e-10
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 182 SLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYE 238
           S  +        +  + C  CG  FT    L  H  R HT    Y C  C  K F     
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDIC-HKAFRRQDH 60

Query: 239 LRQHVRQHTDERPFPCPVCQRTFRRK 264
           LR H   H+ E+PF C  C + F + 
Sbjct: 61  LRDHRYIHSKEKPFKCQECGKGFCQS 86

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 54.7 bits (133), Expect = 8e-10
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 313 SLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYE 369
           S  +        +  + C  CG  FT    L  H  R HT    Y C  C  K F     
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDIC-HKAFRRQDH 60

Query: 370 LRQHVRQHTDERPFPCPVCQRTFRRK 395
           LR H   H+ E+PF C  C + F + 
Sbjct: 61  LRDHRYIHSKEKPFKCQECGKGFCQS 86

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 53.2 bits (129), Expect = 3e-09
 Identities = 33/150 (22%), Positives = 44/150 (29%), Gaps = 50/150 (33%)

Query: 210 LTQHLARLHTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLES 268
            +            + C  C G+ F  +Y L  H R HTDERP+ C +C + FRR+    
Sbjct: 5   SSGGR-LPSKTKKEFICKFC-GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD--- 59

Query: 269 FTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTC 328
                          L  H   H  E+                              + C
Sbjct: 60  --------------HLRDHRYIHSKEK-----------------------------PFKC 76

Query: 329 HMCGHMFTCKRRLTQHLARLHTGSLSYPCT 358
             CG  F   R L  H   LH  + S    
Sbjct: 77  QECGKGFCQSRTLAVH-KTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.1 bits (95), Expect = 1e-04
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRL 210
           L+ H   H  E R Y C+   C + F     L  H   H+ +  + C  CG  F   R L
Sbjct: 33  LLIHERTHTDE-RPYTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTL 89

Query: 211 TQHLARLHTGSLSYPCT 227
             H   LH  + S    
Sbjct: 90  AVH-KTLHMQTSSPTAA 105

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 186 RHVSTHAIQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQ 241
                    + C    C  ++T    L  HL R HTG   Y CT   C  +F  + EL +
Sbjct: 7   GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTR 65

Query: 242 HVRQHTDERPFPCPVCQRTFRRKG 265
           H R+HT  +PF C VC R+F R  
Sbjct: 66  HYRKHTGAKPFQCGVCNRSFSRSD 89

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 317 RHVSTHAIQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQ 372
                    + C    C  ++T    L  HL R HTG   Y CT   C  +F  + EL +
Sbjct: 7   GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTR 65

Query: 373 HVRQHTDERPFPCPVCQRTFRR 394
           H R+HT  +PF C VC R+F R
Sbjct: 66  HYRKHTGAKPFQCGVCNRSFSR 87

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)

Query: 286 SHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHM--CGHMFTCKRRL 341
             S     + R + C++  CT+ +  +S L  H+ TH  +  Y C    C   F     L
Sbjct: 4   GSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63

Query: 342 TQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTD 379
           T+H  R HTG+  + C  C   F  +  L  H+++H +
Sbjct: 64  TRHY-RKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.8 bits (104), Expect = 6e-06
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 25/122 (20%)

Query: 231 GKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSY 290
           G   S+    +  R H        P C + + +                    L +H   
Sbjct: 1   GSSGSSGPDLEKRRIHY----CDYPGCTKVYTKSS-----------------HLKAHLRT 39

Query: 291 HGGEERRYVCNHMQCTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRLTQHLARL 348
           H GE + Y C    C  RF  +  L RH   H  A  + C +C   F+    L  H+ + 
Sbjct: 40  HTGE-KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM-KR 97

Query: 349 HT 350
           H 
Sbjct: 98  HQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRL 210
           L +H   H GE + Y C    C  RF  +  L RH   H  A  + C +C   F+    L
Sbjct: 33  LKAHLRTHTGE-KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL 91

Query: 211 TQHLARLHT 219
             H+ + H 
Sbjct: 92  ALHM-KRHQ 99

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 56.0 bits (136), Expect = 3e-10
 Identities = 32/135 (23%), Positives = 45/135 (33%), Gaps = 46/135 (34%)

Query: 218 HTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLF 276
            +GS    C  C GK F   Y L +H   H+ E+P+ CPVC   F+RK            
Sbjct: 2   SSGSSGVACEIC-GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKD----------- 49

Query: 277 CLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFT 336
                  +  H   H G   +                            Y C  CG  F+
Sbjct: 50  ------RMSYHVRSHDGSVGK---------------------------PYICQSCGKGFS 76

Query: 337 CKRRLTQHLARLHTG 351
               L  H+ ++H+G
Sbjct: 77  RPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE--RPF 252
             C +CG +F     L +H    H+G   Y C  C  +F     +  HVR H     +P+
Sbjct: 8   VACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 253 PCPVCQRTFRRK 264
            C  C + F R 
Sbjct: 67  ICQSCGKGFSRP 78

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE--RPF 383
             C +CG +F     L +H    H+G   Y C  C  +F     +  HVR H     +P+
Sbjct: 8   VACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 384 PCPVCQRTFRRK 395
            C  C + F R 
Sbjct: 67  ICQSCGKGFSRP 78

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 10/93 (10%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
                C    C + F     L RH  +H+ +  Y+C +CG  F  K R++ H+ R H GS
Sbjct: 5   SSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGS 61

Query: 222 LS--YPCTQCPGK-FYSAYELRQHVRQ-HTDER 250
           +   Y C  C GK F     L  H++Q H+   
Sbjct: 62  VGKPYICQSC-GKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 349 HTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
            +GS    C  C GK F   Y L +H   H+ E+P+ CPVC   F+RK
Sbjct: 2   SSGSSGVACEIC-GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRK 48

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH----AIQYTCHMCGHMFTCKR 208
           L  H   H GE + Y C    C  RF     ++ HV +H       Y C  CG  F+   
Sbjct: 23  LNRHKLSHSGE-KPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD 79

Query: 209 RLTQHLARLHTG 220
            L  H+ ++H+G
Sbjct: 80  HLNGHIKQVHSG 91

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 55.1 bits (134), Expect = 3e-10
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFP 253
           + C +CG  F     L+ HL  +H+ +  YPC  C GK F+   ++++H   HT E+P  
Sbjct: 2   FDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYC-GKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 254 CPVCQRTFRRK 264
           C VC + F + 
Sbjct: 60  CQVCGKAFSQS 70

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 55.1 bits (134), Expect = 3e-10
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYELRQHVRQHTDERPFP 384
           + C +CG  F     L+ HL  +H+ +  YPC  C GK F+   ++++H   HT E+P  
Sbjct: 2   FDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYC-GKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 385 CPVCQRTFRRK 395
           C VC + F + 
Sbjct: 60  CQVCGKAFSQS 70

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 22/101 (21%)

Query: 223 SYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFP 281
           S+ C  C GK F  +  L  H+  H+D RP+PC  C + F +K                 
Sbjct: 1   SFDCKIC-GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKS---------------- 43

Query: 282 QELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH 322
            ++  H+  H G E+ + C    C + F  +S L  H   H
Sbjct: 44  -DMKKHTFIHTG-EKPHKCQ--VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 39.3 bits (93), Expect = 1e-04
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 354 SYPCTQCPGK-FYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
           S+ C  C GK F  +  L  H+  H+D RP+PC  C + F +K
Sbjct: 1   SFDCKIC-GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQK 42

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.9 bits (92), Expect = 2e-04
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRL 210
           L +H   H    R Y C    C +RFH  S + +H   H  +  + C +CG  F+    L
Sbjct: 17  LSTHLLIHSDT-RPYPCQ--YCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL 73

Query: 211 TQHLARLHTG 220
             H  R HTG
Sbjct: 74  ITHS-RKHTG 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
           + C +C   F+    LT H+ R HTG   + C  C  KF  + E ++H        P   
Sbjct: 4   FQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61

Query: 255 PVCQRTFRRKG 265
              +    +  
Sbjct: 62  DKVEELLSKNY 72

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.8 bits (133), Expect = 6e-10
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
           + C +C   F+    LT H+ R HTG   + C  C  KF  + E ++H        P   
Sbjct: 4   FQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61

Query: 386 PVCQRTFRRK 395
              +    + 
Sbjct: 62  DKVEELLSKN 71

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 21/97 (21%)

Query: 224 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQE 283
           + C  C   F  +  L  H+R HT E+PF C +C R F R                   E
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD-----------------E 46

Query: 284 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVS 320
              H           + +  +          L   V+
Sbjct: 47  RKRHRDIQH--ILPILED--KVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 23/105 (21%)

Query: 250 RPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRF 309
           +PF C +C R F R                    L +H   H GE + + C+   C R+F
Sbjct: 2   KPFQCRICMRNFSRSD-----------------HLTTHIRTHTGE-KPFACD--ICGRKF 41

Query: 310 HSASLLARHVSTHAIQ-YTCHMCGHMFTCKRRLTQHLA--RLHTG 351
             +    RH     I          + +    L   +A  +   G
Sbjct: 42  ARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 9/89 (10%)

Query: 298 YVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSY 355
           + C    C R F  +  L  H+ TH  +  + C +CG  F       +H   +    L  
Sbjct: 4   FQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQHI-LPI 59

Query: 356 PCTQCPGKFYSAYELRQHV---RQHTDER 381
              +        Y L   V   ++   ER
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKLVGER 88

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 53.7 bits (130), Expect = 9e-10
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 195 YTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQCP-GK-FYSAYELRQHVRQHTDER 250
             C    CG +F+ ++ L  H    H    S+ C +   GK F     L++H++ H+D R
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 251 PFPCPVCQRTF 261
            + C     + 
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 53.7 bits (130), Expect = 9e-10
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 326 YTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQCP-GK-FYSAYELRQHVRQHTDER 381
             C    CG +F+ ++ L  H    H    S+ C +   GK F     L++H++ H+D R
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 382 PFPCPVCQRTF 392
            + C     + 
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 18/95 (18%), Positives = 27/95 (28%), Gaps = 23/95 (24%)

Query: 246 HTDERPFPCPV--CQRTFRRKGLESFTFSLRLFCLYFPQELISHS-SYHGGEERRYVCNH 302
            +     PC    C R F  +                 Q L  H    H  + + + C  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNR-----------------QYLNHHKKYQHIHQ-KSFSCPE 43

Query: 303 MQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMF 335
             C + F+    L  H+  H+    Y C   G   
Sbjct: 44  PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 5/71 (7%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLS----YPCTQCPGKFYSAYELRQHVRQHTDER 250
           Y C  C   F  K+ L  H  + +         + C++C   F     + +H        
Sbjct: 16  YACSHCDKTFRQKQLLDMHF-KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD 74

Query: 251 PFPCPVCQRTF 261
                    + 
Sbjct: 75  GVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 5/71 (7%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLS----YPCTQCPGKFYSAYELRQHVRQHTDER 381
           Y C  C   F  K+ L  H  + +         + C++C   F     + +H        
Sbjct: 16  YACSHCDKTFRQKQLLDMHF-KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD 74

Query: 382 PFPCPVCQRTF 392
                    + 
Sbjct: 75  GVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 23/102 (22%), Positives = 34/102 (33%), Gaps = 24/102 (23%)

Query: 239 LRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERR- 297
                R HT E+P+ C  C +TFR+K L                 L  H   +       
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQL-----------------LDMHFKRYHDPNFVP 45

Query: 298 --YVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMF 335
             +VC+  +C + F   + +ARH    A          G   
Sbjct: 46  AAFVCS--KCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 341 LTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE----RPFPCPVCQRTFRRK 395
                 R HTG   Y C+ C   F     L  H +++ D       F C  C +TF R+
Sbjct: 3   SGSSG-RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.2 bits (117), Expect = 7e-08
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 8/77 (10%)

Query: 186 RHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYP--------CTQCPGKFYSAY 237
           + +    +      C   F+    L  H+   H G             C +    F + Y
Sbjct: 17  KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 238 ELRQHVRQHTDERPFPC 254
           +L  H+R HT E+  P 
Sbjct: 77  KLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.2 bits (117), Expect = 7e-08
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 8/77 (10%)

Query: 317 RHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYP--------CTQCPGKFYSAY 368
           + +    +      C   F+    L  H+   H G             C +    F + Y
Sbjct: 17  KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 369 ELRQHVRQHTDERPFPC 385
           +L  H+R HT E+  P 
Sbjct: 77  KLVNHIRVHTGEKSGPS 93

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF 252
           Y C  CG  F+    L QH  R+HTG   Y C +C   F     L  H R HT     
Sbjct: 15  YGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF 383
           Y C  CG  F+    L QH  R+HTG   Y C +C   F     L  H R HT     
Sbjct: 15  YGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 341 LTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
            +   + +H+G   Y C +C   F  +  L QH R HT E+P+ C  C + F + 
Sbjct: 2   SSGS-SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 55

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 20/84 (23%), Positives = 28/84 (33%), Gaps = 20/84 (23%)

Query: 239 LRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRY 298
                  H+ E+P+ C  C + F R                    L+ H   H G E+ Y
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSS-----------------ILVQHQRVHTG-EKPY 43

Query: 299 VCNHMQCTRRFHSASLLARHVSTH 322
            C   +C + F   S L  H   H
Sbjct: 44  KCL--ECGKAFSQNSGLINHQRIH 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 210 LTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE--RPFPCPVCQRTFRRKG 265
                 R H+G   Y C  C  +F  +  ++ H+ Q   E    F CP C     RK 
Sbjct: 3   SGSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 341 LTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE--RPFPCPVCQRTFRRK 395
                 R H+G   Y C  C  +F  +  ++ H+ Q   E    F CP C     RK
Sbjct: 3   SGSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 58

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 6/74 (8%)

Query: 184 LARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLS--YPCTQCPGKFYSAYEL 239
                 TH+ +  Y C++C   FT    +  H+           + C  C        +L
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 240 RQHVR-QHTDERPF 252
             H+R QH+   P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 6/74 (8%)

Query: 315 LARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLS--YPCTQCPGKFYSAYEL 370
                 TH+ +  Y C++C   FT    +  H+           + C  C        +L
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 371 RQHVR-QHTDERPF 383
             H+R QH+   P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 16/85 (18%), Positives = 24/85 (28%), Gaps = 20/85 (23%)

Query: 239 LRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERR- 297
                R H+ E+P+ C +C   F + G                  +  H      E    
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSG-----------------TMKMHILQKHTENVAK 45

Query: 298 YVCNHMQCTRRFHSASLLARHVSTH 322
           + C H  C       S L  H+   
Sbjct: 46  FHCPH--CDTVIARKSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 7/72 (9%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH----AIQYTCHMCGHMFTCKR 208
             S    H GE + Y C    C  RF  +  +  H+         ++ C  C  +   K 
Sbjct: 3   SGSSGRTHSGE-KPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59

Query: 209 RLTQHLARLHTG 220
            L  HL + H+ 
Sbjct: 60  DLGVHLRKQHSY 71

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 19/73 (26%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 195 YTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDER 250
           Y CH   CG  F    +L  H    HT  L Y C    C  +F     L++H + H    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 251 PFPCPVCQRTFRR 263
                 C    + 
Sbjct: 61  CKKDDSCSFVGKT 73

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 19/73 (26%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 326 YTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDER 381
           Y CH   CG  F    +L  H    HT  L Y C    C  +F     L++H + H    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 382 PFPCPVCQRTFRR 394
                 C    + 
Sbjct: 61  CKKDDSCSFVGKT 73

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 3/68 (4%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRL 210
           L  H   H  +   Y C H  C +RF   S L RH   H          C  +       
Sbjct: 19  LKVHQFSHTQQ-LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 77

Query: 211 TQHLARLH 218
            +H+A  H
Sbjct: 78  LKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 3/68 (4%)

Query: 284 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRL 341
           L  H   H  +   Y C H  C +RF   S L RH   H          C  +       
Sbjct: 19  LKVHQFSHTQQ-LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 77

Query: 342 TQHLARLH 349
            +H+A  H
Sbjct: 78  LKHVAECH 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
             C  C +  + K  L  H  R+H     + C  C         L +H+++   +   P 
Sbjct: 10  EKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

Query: 255 P 255
            
Sbjct: 69  S 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
             C  C +  + K  L  H  R+H     + C  C         L +H+++   +   P 
Sbjct: 10  EKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

Query: 386 P 386
            
Sbjct: 69  S 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 13/50 (26%), Positives = 19/50 (38%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG 265
              +      C++C     S   LR H R H  +RPF C  C    ++  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPS 51

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
              +      C++C     S   LR H R H  +RPF C  C    ++ 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQP 50

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 221
                C+  +C+    S + L  H   H     + C+ C         L++H+ +   G 
Sbjct: 7   GHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKFHGD 63

Query: 222 LSYPCT 227
           +S P +
Sbjct: 64  MSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGS 352
                C+  +C+    S + L  H   H     + C+ C         L++H+ +   G 
Sbjct: 7   GHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKFHGD 63

Query: 353 LSYPCT 358
           +S P +
Sbjct: 64  MSGPSS 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.9 bits (110), Expect = 6e-07
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 182 SLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYE 238
               R       +  Y C  CG  F+    L++H  R HTG   Y C +C GK F     
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDEC-GKAFIQRSH 61

Query: 239 LRQHVRQHTDERPF 252
           L  H R HT   P 
Sbjct: 62  LIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.9 bits (110), Expect = 6e-07
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 313 SLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK-FYSAYE 369
               R       +  Y C  CG  F+    L++H  R HTG   Y C +C GK F     
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDEC-GKAFIQRSH 61

Query: 370 LRQHVRQHTDERPF 383
           L  H R HT   P 
Sbjct: 62  LIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.0 bits (100), Expect = 1e-05
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 341 LTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
             +           Y C +C   F  + +L +H R HT E+P+ C  C + F ++
Sbjct: 6   SGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR 59

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVR--QHTDERPFPCPVCQRTFRRKG 265
               G  +Y C  C   +       +H       + + +PCP C + F RK 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKD 54

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVR--QHTDERPFPCPVCQRTFRRK 395
               G  +Y C  C   +       +H       + + +PCP C + F RK
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRK 53

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 13/80 (16%), Positives = 19/80 (23%), Gaps = 20/80 (25%)

Query: 244 RQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHS-SYHGGEERRYVCNH 302
                E  + C VC R +                         H  + H    + Y C  
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHIS-----------------NFCRHYVTSHKRNVKVYPCP- 44

Query: 303 MQCTRRFHSASLLARHVSTH 322
             C + F     +  HV   
Sbjct: 45  -FCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 195 YTCHMCGHMFTCKRRLTQHL-ARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHT 247
           Y C +C  ++T      +H           YPC  C  +F     +  HV+   
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 326 YTCHMCGHMFTCKRRLTQHL-ARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHT 378
           Y C +C  ++T      +H           YPC  C  +F     +  HV+   
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 182 SLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYEL 239
                H         Y C  C   F  K  L  H   +HTG   Y C  C  +F     L
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANL 61

Query: 240 RQHVRQHTDERPF 252
           + H R H+ E+P+
Sbjct: 62  KTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 313 SLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYEL 370
                H         Y C  C   F  K  L  H   +HTG   Y C  C  +F     L
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANL 61

Query: 371 RQHVRQHTDERPF 383
           + H R H+ E+P+
Sbjct: 62  KTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 8e-06
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 210 LTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG 265
              H + +      Y C +C   F     L  H   HT E+P+ C +C   F R  
Sbjct: 5   HHHH-SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPA 59

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 9e-06
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 341 LTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
              H + +      Y C +C   F     L  H   HT E+P+ C +C   F R 
Sbjct: 5   HHHH-SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP 58

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.8 bits (89), Expect = 4e-04
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 153 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRL 210
              HS     + + Y C+  +C   F     LA H + H  +  Y C++CG  F     L
Sbjct: 5   HHHHSHMTHSD-KPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 211 TQHLARLHTG 220
             H  R+H+G
Sbjct: 62  KTHT-RIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.8 bits (89), Expect = 4e-04
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 284 LISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRL 341
              HS     + + Y C+  +C   F     LA H + H  +  Y C++CG  F     L
Sbjct: 5   HHHHSHMTHSD-KPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 342 TQHLARLHTG 351
             H  R+H+G
Sbjct: 62  KTHT-RIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.0 bits (87), Expect = 8e-04
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 20/84 (23%)

Query: 239 LRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRY 298
              H      ++P+ C  CQ +FR KG                  L SH + H G E+ Y
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKG-----------------NLASHKTVHTG-EKPY 46

Query: 299 VCNHMQCTRRFHSASLLARHVSTH 322
            CN   C  +F+  + L  H   H
Sbjct: 47  RCN--ICGAQFNRPANLKTHTRIH 68

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 215 ARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 263
             +      Y C    C  +F  + EL +H+R HT ++PF C +C R F R
Sbjct: 11  NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 346 ARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRR 394
             +      Y C    C  +F  + EL +H+R HT ++PF C +C R F R
Sbjct: 11  NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 177 RFHSASLLARHVSTHAIQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFY 234
             H  + L  +V      Y C +  C   F+    LT+H+ R+HTG   + C  C   F 
Sbjct: 2   EPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFS 60

Query: 235 SAYELRQHVRQHT 247
            +  L  H+R HT
Sbjct: 61  RSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 308 RFHSASLLARHVSTHAIQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFY 365
             H  + L  +V      Y C +  C   F+    LT+H+ R+HTG   + C  C   F 
Sbjct: 2   EPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFS 60

Query: 366 SAYELRQHVRQHT 378
            +  L  H+R HT
Sbjct: 61  RSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRLTQHLARLHT 219
            R Y C    C RRF  +  L RH+  H     + C +C   F+    LT H+ R HT
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTH--AIQYTCHMCGHMFTCKRRLTQHLARLHT 350
            R Y C    C RRF  +  L RH+  H     + C +C   F+    LT H+ R HT
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHT 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 14/66 (21%), Positives = 20/66 (30%), Gaps = 4/66 (6%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHT---GSLSYPCTQCPGKFYSAYELRQHVRQHTDERP 251
             C +CG     K  L  H  R H     +L +PC  C  +F     +  H  +      
Sbjct: 8   LQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 252 FPCPVC 257
                 
Sbjct: 67  LAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 14/66 (21%), Positives = 20/66 (30%), Gaps = 4/66 (6%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHT---GSLSYPCTQCPGKFYSAYELRQHVRQHTDERP 382
             C +CG     K  L  H  R H     +L +PC  C  +F     +  H  +      
Sbjct: 8   LQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 383 FPCPVC 388
                 
Sbjct: 67  LAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 3/50 (6%)

Query: 349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTD---ERPFPCPVCQRTFRRK 395
            +GS    C  C         L  H R+H +      FPC  C + F + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKP 51

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 14/71 (19%), Positives = 19/71 (26%), Gaps = 7/71 (9%)

Query: 164 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-----YTCHMCGHMFTCKRRLTQHLARLH 218
                C    C       + L  H   HA       + C  CG  F     +  H ++ H
Sbjct: 5   SSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 219 TGSLSYPCTQC 229
              L  P    
Sbjct: 63  PALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 14/71 (19%), Positives = 19/71 (26%), Gaps = 7/71 (9%)

Query: 295 ERRYVCNHMQCTRRFHSASLLARHVSTHAIQ-----YTCHMCGHMFTCKRRLTQHLARLH 349
                C    C       + L  H   HA       + C  CG  F     +  H ++ H
Sbjct: 5   SSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 350 TGSLSYPCTQC 360
              L  P    
Sbjct: 63  PALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 16/80 (20%), Positives = 22/80 (27%), Gaps = 21/80 (26%)

Query: 246 HTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGE--ERRYVCNHM 303
            +      C +C  T R+K                   L  H   H       R+ C   
Sbjct: 2   SSGSSGLQCEICGFTCRQKA-----------------SLNWHQRKHAETVAALRFPCE-- 42

Query: 304 QCTRRFHSASLLARHVSTHA 323
            C +RF     +A H S   
Sbjct: 43  FCGKRFEKPDSVAAHRSKSH 62

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 167 YVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTG 220
           +VC    CTR F     L RH  +H  +  Y C +C   FT +  L +H  ++H+G
Sbjct: 3   FVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 298 YVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTG 351
           +VC    CTR F     L RH  +H  +  Y C +C   FT +  L +H  ++H+G
Sbjct: 3   FVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 224 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 264
           + C  C   F     L++H R HT+E+P+PC +C R F R+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR 43

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 355 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
           + C  C   F     L++H R HT+E+P+PC +C R F R+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 194 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER 250
           +Y C  CG        L +H+ R HT    Y CT C   F +   L +H++     +
Sbjct: 1   KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER 381
           +Y C  CG        L +H+ R HT    Y CT C   F +   L +H++     +
Sbjct: 1   KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.8 bits (97), Expect = 5e-05
 Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 165 RRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARL-----HT 219
           ++Y+ NH           L   H  T   +              +L    + L       
Sbjct: 11  KKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASK 70

Query: 220 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 264
               + C  C   F S+  L+QH+R    E    CPVC++ F   
Sbjct: 71  AISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST 113

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.8 bits (97), Expect = 5e-05
 Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 296 RRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARL-----HT 350
           ++Y+ NH           L   H  T   +              +L    + L       
Sbjct: 11  KKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASK 70

Query: 351 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRK 395
               + C  C   F S+  L+QH+R    E    CPVC++ F   
Sbjct: 71  AISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST 113

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 6e-04
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 4/77 (5%)

Query: 147 LYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTC 206
           L     L    +       ++VC    C   F S+  L +H+        C +C   FT 
Sbjct: 57  LDESSYLYRLLASKAI--SQFVCPL--CLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTS 112

Query: 207 KRRLTQHLARLHTGSLS 223
                 H+ + H   +S
Sbjct: 113 TDSALDHVCKKHNICVS 129

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 6e-04
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 4/77 (5%)

Query: 278 LYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTC 337
           L     L    +       ++VC    C   F S+  L +H+        C +C   FT 
Sbjct: 57  LDESSYLYRLLASKAI--SQFVCPL--CLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTS 112

Query: 338 KRRLTQHLARLHTGSLS 354
                 H+ + H   +S
Sbjct: 113 TDSALDHVCKKHNICVS 129

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 19/119 (15%), Positives = 30/119 (25%), Gaps = 21/119 (17%)

Query: 235 SAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISH--SSYHG 292
           S    + +    T    F C  C   +                     EL  H   + H 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLV-----------------ELTVHMNETGHY 45

Query: 293 GEERRYVCNHMQCTRRFHSASLLARHVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLH 349
            ++     N+            L         Q    C  CGH F   + L+ H+ +  
Sbjct: 46  RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.6 bits (89), Expect = 6e-04
 Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 6/91 (6%)

Query: 311 SASLLARHVSTH--AIQYTCHMCGHMFTCKRRLTQHLARL-HTGSLSYPCTQCPGKFYSA 367
           S S    + S    A ++ C  C   +     LT H+    H    ++       K +S 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 368 YE---LRQHVRQHTDERPFPCPVCQRTFRRK 395
                L +   +   ++   C  C  +F   
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESL 93

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 216 RLHTGSLSYPCTQCPGK-FYSAYELRQHVRQ-HTDERPFPCPVCQRTF 261
              +    Y C  C GK F     L  H++Q HT ERP  C V     
Sbjct: 5   SSGSVGKPYICQSC-GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 347 RLHTGSLSYPCTQCPGK-FYSAYELRQHVRQ-HTDERPFPCPVCQRTF 392
              +    Y C  C GK F     L  H++Q HT ERP  C V     
Sbjct: 5   SSGSVGKPYICQSC-GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 187 HVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYS 235
             S+ ++   Y C  CG  F+    L  H+ ++HT    + C        S
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW-VSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 318 HVSTHAIQ--YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYS 366
             S+ ++   Y C  CG  F+    L  H+ ++HT    + C        S
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW-VSGPS 52

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 216 RLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDERPFPC 254
              TG   + CT   C  +F  + EL +H R H+  +P   
Sbjct: 5   SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 347 RLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDERPFPC 385
              TG   + CT   C  +F  + EL +H R H+  +P   
Sbjct: 5   SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
              TG   + CT C   F +   L  H R HT E+  P 
Sbjct: 5   SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
              TG   + CT C   F +   L  H R HT E+  P 
Sbjct: 5   SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 20/86 (23%)

Query: 239 LRQHVRQHTDERPFPCPV--CQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEER 296
                   +  R   C    C +T+ +                    L +H+  H GE +
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSS-----------------HLKAHTRTHTGE-K 46

Query: 297 RYVCNHMQCTRRFHSASLLARHVSTH 322
            + C+   C RRF  +  L+RH  TH
Sbjct: 47  PFSCSWKGCERRFARSDELSRHRRTH 72

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 9/44 (20%), Positives = 13/44 (29%)

Query: 214 LARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC 257
                       C  C   F   Y L +H   H+ E+P+     
Sbjct: 3   SGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 9/44 (20%), Positives = 13/44 (29%)

Query: 345 LARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC 388
                       C  C   F   Y L +H   H+ E+P+     
Sbjct: 3   SGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
              TG   Y C +C   F  A  L +H R H+ E+P   
Sbjct: 5   SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
              TG   Y C +C   F  A  L +H R H+ E+P   
Sbjct: 5   SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
              TG   Y C +C   F  A  L +H R H+ E+P   
Sbjct: 5   SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
              TG   Y C +C   F  A  L +H R H+ E+P   
Sbjct: 5   SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 15/39 (38%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
              TG   Y C +C   F       QH R HT +RP   
Sbjct: 5   SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 15/39 (38%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
              TG   Y C +C   F       QH R HT +RP   
Sbjct: 5   SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 14/39 (35%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
              TG   Y C +C   F S   L  H R HT E     
Sbjct: 5   SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 14/39 (35%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
              TG   Y C +C   F S   L  H R HT E     
Sbjct: 5   SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 254
              TG   Y C +C   F   Y+L  H R H  E+P   
Sbjct: 5   SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC 385
              TG   Y C +C   F   Y+L  H R H  E+P   
Sbjct: 5   SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	410
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.7
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.65
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.65
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.61
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.61
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.53
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.47
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.45
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.45
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.43
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.43
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.41
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.41
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.4
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.39
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.37
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.36
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.36
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.35
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.35
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.34
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.31
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.31
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.28
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.27
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.24
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.24
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.21
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.21
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.17
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.15
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.05
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.04
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.99
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.98
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.98
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.96
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.82
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.82
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.79
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.79
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.79
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.78
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.78
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.76
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.75
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.74
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.74
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.73
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.72
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.71
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.7
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.68
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.65
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.65
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.64
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.64
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.62
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.62
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.62
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.61
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.61
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.6
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.6
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.59
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.59
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.58
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.58
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.57
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.57
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.57
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.57
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.56
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.55
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.54
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.54
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.53
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.53
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.53
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.53
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.5
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.49
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.47
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.46
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.45
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.44
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.44
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.39
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.34
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.34
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.3
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.3
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.28
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.25
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.24
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.24
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.22
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.21
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.2
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.19
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.17
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.16
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.15
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.13
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.41
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.11
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.38
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.07
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.04
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.01
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.95
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.15
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.9
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.88
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.84
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.82
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.79
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.77
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.77
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.76
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.76
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.74
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.7
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.7
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.68
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.67
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.67
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.66
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.65
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.65
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.82
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.77
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.76
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.58
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.55
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.53
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.48
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.47
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.4
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.33
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.22
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.06
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.98
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.51
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.92
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.6
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.44
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.36
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.72
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.43
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.85
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	90.76
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	86.48
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.41
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.13
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	82.81
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	80.58

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=8.6e-35  Score=246.38  Aligned_cols=178  Identities=33%  Similarity=0.709  Sum_probs=97.7

Q ss_pred             HHHHHhhCCC--CcccccccccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhh
Q psy12647        184 LARHVSTHAI--QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTF  261 (410)
Q Consensus       184 l~~H~~~~~~--~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f  261 (410)
                      |..|+..+.+  +|.|+.|++.|.+...|..|+ ..|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|
T Consensus         9 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A            9 SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             ----------------------CCSSHHHHHGG-GCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             chhhhhhcCCCCCCcCCCCccccCCHHHHHHHH-HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            4444444432  566666666666666666665 5566666666666666666666666666666666556665555555


Q ss_pred             hhcCCcccccccchhcccCchhhcccccccCCCCcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChh
Q psy12647        262 RRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKR  339 (410)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~  339 (410)
                      ....                 .|..|++.|.++ ++|.|+  .|++.|.+...|..|++.|.  ++|.|++|++.|.+..
T Consensus        88 ~~~~-----------------~l~~H~~~h~~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  147 (190)
T 2i13_A           88 SQRA-----------------NLRAHQRTHTGE-KPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRED  147 (190)
T ss_dssp             SCHH-----------------HHHHHHHHHHTC-CCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCHH-----------------HHHHHHHhcCCC-CCCcCC--CCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHH
Confidence            5554                 555555555554 666666  66666666666666666654  5677777777777777


Q ss_pred             hHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCc
Q psy12647        340 RLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF  383 (410)
Q Consensus       340 ~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  383 (410)
                      .|..|+ .+|.+++||.|++|++.|.....|..|+++|+|++||
T Consensus       148 ~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          148 NLHTHQ-RTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHH-HhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            777776 6677777777777777777777777777777776664

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3e-35  Score=249.20  Aligned_cols=180  Identities=32%  Similarity=0.693  Sum_probs=144.7

Q ss_pred             hhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcCCcccccccchhcccCchhhcc
Q psy12647        207 KRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELIS  286 (410)
Q Consensus       207 ~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~  286 (410)
                      ...|..|+ ..|+++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|....                 .|..
T Consensus         6 ~~~l~~h~-~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~-----------------~l~~   67 (190)
T 2i13_A            6 SSSSVAQA-ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK-----------------DLTR   67 (190)
T ss_dssp             --------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHH-----------------HHHH
T ss_pred             hccchhhh-hhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHH-----------------HHHH
Confidence            45678887 78999999999999999999999999999999999999999999999988                 9999


Q ss_pred             cccccCCCCcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccc
Q psy12647        287 HSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKF  364 (410)
Q Consensus       287 H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  364 (410)
                      |++.|.++ ++|.|+  .|++.|.+...|..|++.|.  ++|.|++|++.|.+...|..|+ .+|.+++||.|++|++.|
T Consensus        68 H~~~h~~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f  143 (190)
T 2i13_A           68 HQRTHTGE-KPYKCP--ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPECGKSF  143 (190)
T ss_dssp             HHHHHHCC-CCEECT--TTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEE
T ss_pred             HHHhcCCC-CCccCc--ccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCCccc
Confidence            99999986 999999  99999999999999999886  7899999999999999999998 899999999999999999


Q ss_pred             cCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        365 YSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       365 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      .+...|..|+++|++++||+|.+|+++|.++..|..|++..+++
T Consensus       144 ~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          144 SREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             SCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             CCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999887653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=6.5e-30  Score=216.32  Aligned_cols=166  Identities=28%  Similarity=0.614  Sum_probs=117.2

Q ss_pred             CCCcccc--CCCCcccCCHHHHHHHHHHhcCCCCCCC--ccchhhhhhcCCcccccccchhcccCchhhcccccccCCCC
Q psy12647        220 GSLSYPC--TQCPGKFYSAYELRQHVRQHTDERPFPC--PVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEE  295 (410)
Q Consensus       220 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~  295 (410)
                      +.++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|....                 .|..|++.|.++ 
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~-----------------~l~~H~~~h~~~-   70 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLH-----------------HLTRHSLTHTGE-   70 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHH-----------------HHHHHHTTTTTC-
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHH-----------------HHHHHHHHccCC-
Confidence            3455666  4566666666666666666666666666  55666666555                 666666666654 


Q ss_pred             cccccCcccccccccChhhHHHHH-HcCC---CCccc--ccccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCc
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHV-STHA---IQYTC--HMCGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSA  367 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~-~~~~---~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~  367 (410)
                      ++|.|+.+.|++.|.+...|..|+ +.|.   ++|.|  ..|++.|.+.+.|..|+ .+|.+++||.|+.  |++.|.+.
T Consensus        71 ~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~F~~~  149 (190)
T 1tf6_A           71 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLP  149 (190)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHH-GGGSSSCSSBCCSSSCCCBCSSH
T ss_pred             CceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCCchhcCH
Confidence            666666445777777777777777 4442   46777  77888888888888887 7788888888877  88888888


Q ss_pred             HhHHHHHHhhcCCCCccCcc---ccccccccccCccCCCCCCC
Q psy12647        368 YELRQHVRQHTDERPFPCPV---CQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       368 ~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~H~  407 (410)
                      +.|..|+++|+|   |+|..   |++.|.++..|..|++..|+
T Consensus       150 ~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          150 SRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             HHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             HHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            888888888877   77888   88888888888888877765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=1.3e-28  Score=208.36  Aligned_cols=163  Identities=31%  Similarity=0.640  Sum_probs=131.3

Q ss_pred             Cccc--ccccccccChhHHHHHHhhhcCCCCcccc--CCCCcccCCHHHHHHHHHHhcCCCCCCCc--cchhhhhhcCCc
Q psy12647        194 QYTC--HMCGHMFTCKRRLTQHLARLHTGSLSYPC--TQCPGKFYSAYELRQHVRQHTDERPFPCP--VCQRTFRRKGLE  267 (410)
Q Consensus       194 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~~  267 (410)
                      +|.|  +.|++.|.+...|..|+ ..|.++++|.|  +.|++.|.+...|..|++.|.++++|.|+  .|++.|.+..  
T Consensus        12 ~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~--   88 (190)
T 1tf6_A           12 RYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA--   88 (190)
T ss_dssp             CCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH--
T ss_pred             ceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH--
Confidence            5666  56777777777777776 56777777777  66777777777777777777777777777  6777777766  


Q ss_pred             ccccccchhcccCchhhcccc-cccCCCCccccc--CcccccccccChhhHHHHHHcCC--CCccccc--ccCccCChhh
Q psy12647        268 SFTFSLRLFCLYFPQELISHS-SYHGGEERRYVC--NHMQCTRRFHSASLLARHVSTHA--IQYTCHM--CGHMFTCKRR  340 (410)
Q Consensus       268 ~~~~~~~~~~~~~~~~l~~H~-~~~~~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~--C~~~f~~~~~  340 (410)
                                     .|..|+ +.|.....+|.|  +  .|++.|.+.+.|..|+++|.  ++|.|++  |++.|.+.+.
T Consensus        89 ---------------~l~~H~~~~h~~~~~~~~C~~~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~  151 (190)
T 1tf6_A           89 ---------------NMKKHFNRFHNIKICVYVCHFE--NCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSR  151 (190)
T ss_dssp             ---------------HHHHHHHTTSSTTTSCCEECSS--SSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHH
T ss_pred             ---------------HHHHHHHHhcCCCcceeeCCCC--CCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHH
Confidence                           777777 455333488999  7  89999999999999999987  7899988  9999999999


Q ss_pred             HHHHHHhhcCCCCCcccCc---CcccccCcHhHHHHHHhhcCC
Q psy12647        341 LTQHLARLHTGSLSYPCTQ---CPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       341 l~~H~~~~H~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      |..|+ .+|.+   |.|+.   |++.|.....|..|+++|+++
T Consensus       152 L~~H~-~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          152 LKRHE-KVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHH-TSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHH-HHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            99998 78887   89999   999999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.2e-24  Score=177.55  Aligned_cols=99  Identities=27%  Similarity=0.622  Sum_probs=47.1

Q ss_pred             ccccChhhHHHHHHcCC--CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCcHhHHHHH-HhhcC
Q psy12647        307 RRFHSASLLARHVSTHA--IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHV-RQHTD  379 (410)
Q Consensus       307 ~~f~~~~~l~~H~~~~~--~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  379 (410)
                      +.|.+...|..|++.|.  ++|.|++  |++.|.+...|..|+ .+|.+++||.|++  |++.|.+...|..|+ ++|.+
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~  125 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN  125 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHH-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHH-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            44444444444443333  3444443  444444444555554 4444455555554  555555555555554 44555


Q ss_pred             CCCccCcc--ccccccccccCccCCCCCC
Q psy12647        380 ERPFPCPV--CQRTFRRKVCTTPSPQPQH  406 (410)
Q Consensus       380 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H  406 (410)
                      +++|+|.+  |+++|.+++.|..|++..|
T Consensus       126 ~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            55555544  5555555555555544444

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=2.8e-25  Score=181.34  Aligned_cols=96  Identities=25%  Similarity=0.559  Sum_probs=59.6

Q ss_pred             hhcccccccCCCCcccccCcccccccccChhhHHHHHHcCC--CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccC
Q psy12647        283 ELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCT  358 (410)
Q Consensus       283 ~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~  358 (410)
                      .|..|++.|.++ ++|.|+.+.|++.|.+...|..|++.|.  ++|.|++  |++.|.+.+.|..|+..+|.+++||.|+
T Consensus        54 ~l~~H~~~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  132 (155)
T 2gli_A           54 MLVVHMRRHTGE-KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK  132 (155)
T ss_dssp             HHHHHTHHHHCC-CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC
T ss_pred             HHHHHHHhcCCC-CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            666666666654 6666652236666666666666666655  5566665  6666666666666655566666666665


Q ss_pred             c--CcccccCcHhHHHHHHhhcC
Q psy12647        359 Q--CPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       359 ~--C~~~f~~~~~l~~H~~~h~~  379 (410)
                      +  |++.|...+.|..|+++|+|
T Consensus       133 ~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          133 LPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             STTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCccccCCHHHHHHHHHhhcC
Confidence            5  66666666666666666554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.9e-23  Score=162.56  Aligned_cols=113  Identities=27%  Similarity=0.547  Sum_probs=106.8

Q ss_pred             CcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHh--hcCCCCCcccCcCcccccCcHhH
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLAR--LHTGSLSYPCTQCPGKFYSAYEL  370 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~--~H~~~~~~~C~~C~~~f~~~~~l  370 (410)
                      +++|.|+  .|++.|.+...|..|++.|.  ++|.|++|++.|.+...|..|+..  .|.++++|.|++|++.|.....|
T Consensus         5 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            5 SSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CSSCCCT--TTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCC--CCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            3899999  99999999999999999987  799999999999999999999844  46889999999999999999999


Q ss_pred             HHHHHhhcCCCCccCccccccccccccCccCCCCCCCCC
Q psy12647        371 RQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDV  409 (410)
Q Consensus       371 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  409 (410)
                      ..|+++|++++||+|.+|++.|.++..|..|++..|.+.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999999999999999999999999999999999888763

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=1.3e-22  Score=159.48  Aligned_cols=110  Identities=23%  Similarity=0.440  Sum_probs=99.1

Q ss_pred             hhcccccccCCCCcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcC
Q psy12647        283 ELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQC  360 (410)
Q Consensus       283 ~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  360 (410)
                      .+..|...+.|+ ++|.|+  .|++.|.+.+.|..|+++|.  ++|.|++|++.|.+.+.|..|+ .+|++++||.|++|
T Consensus         9 h~~h~~~~h~Ge-k~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   84 (133)
T 2lt7_A            9 HDDHYELIVDGR-VYYICI--VCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLAC   84 (133)
T ss_dssp             CSSEEEEEETTE-EEEEET--TTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSS
T ss_pred             HHhhceeecCCC-cCeECC--CCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhc-cccCCCccccCCCC
Confidence            344455667775 999999  99999999999999999986  8999999999999999999998 89999999999999


Q ss_pred             cccccCcHhHHHHHHhhcCCC------CccCccccccccccc
Q psy12647        361 PGKFYSAYELRQHVRQHTDER------PFPCPVCQRTFRRKV  396 (410)
Q Consensus       361 ~~~f~~~~~l~~H~~~h~~~~------~~~C~~C~~~f~~~~  396 (410)
                      ++.|...+.|..|+++|++++      +|+|.+|++.|....
T Consensus        85 ~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             CCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence            999999999999999998764      589999999887543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=3.2e-22  Score=156.54  Aligned_cols=112  Identities=32%  Similarity=0.678  Sum_probs=103.2

Q ss_pred             CcccccCcccccccccChhhHHHHHHcCC-CCcccccccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCcHhHH
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVSTHA-IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELR  371 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~  371 (410)
                      +++|.|++..|++.|.+...|..|++.|. ++|.|.+|++.|.+...|..|+ .+|.++++|.|++  |++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            37899987789999999999999999987 8899999999999999999998 8999999999986  999999999999


Q ss_pred             HHHHhhcCCCCccCc--cccccccccccCccCCCCCCC
Q psy12647        372 QHVRQHTDERPFPCP--VCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       372 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      .|+++|+++++|+|+  .|+++|.++..|..|++..+.
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            999999999999996  599999999999999986544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=2.9e-22  Score=155.61  Aligned_cols=109  Identities=33%  Similarity=0.695  Sum_probs=102.6

Q ss_pred             CcccccCcccccccccChhhHHHHHHcCC--CCcccc--cccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhH
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCH--MCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYEL  370 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  370 (410)
                      +++|.|..+.|++.|.+...|..|++.|.  ++|.|+  .|++.|.+...|..|+ .+|.++++|.|++|++.|.....|
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHH-HHcCCCCCccCCccCchhCCHHHH
Confidence            48999993349999999999999999886  899999  7999999999999998 789999999999999999999999


Q ss_pred             HHHHHhhcCCCCccC--ccccccccccccCccCCCC
Q psy12647        371 RQHVRQHTDERPFPC--PVCQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       371 ~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~  404 (410)
                      ..|+++|+++++|+|  +.|++.|.++..|..|++.
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            999999999999999  8999999999999999864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=5.4e-21  Score=155.76  Aligned_cols=128  Identities=26%  Similarity=0.490  Sum_probs=98.7

Q ss_pred             cCCCCccccCCCCcccCCHHHHHHHHHH-hcCCCCCCCccchhhhhhcCCcccccccchhcccCchhhcccccccCCCCc
Q psy12647        218 HTGSLSYPCTQCPGKFYSAYELRQHVRQ-HTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEER  296 (410)
Q Consensus       218 H~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~  296 (410)
                      ..++.+|.|+.|++.|.+...|..|++. |.+..+.....                                      ..
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~--------------------------------------~~   61 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV--------------------------------------CY   61 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCC--------------------------------------CC
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcc--------------------------------------cc
Confidence            3445667777777777777777777776 43332211000                                      14


Q ss_pred             ccccCcccccccccChhhHHHHHHcCC--CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCcHhH
Q psy12647        297 RYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYEL  370 (410)
Q Consensus       297 ~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l  370 (410)
                      .|.|.  .|++.|.+...|..|++.|.  ++|.|.+  |++.|.....|..|+ .+|.+++||.|++  |++.|.....|
T Consensus        62 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~k~f~~~~~L  138 (155)
T 2rpc_A           62 WEECP--REGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDR  138 (155)
T ss_dssp             BTTCT--TSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTCSSCSBCCSSTTCCCCBSSHHHH
T ss_pred             ccCCC--CcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhCCCCCccCCCCCCCCccCCHHHH
Confidence            46788  88888888888888888776  7788888  999999999999998 8899999999997  99999999999


Q ss_pred             HHHHHhhcCCCCccCc
Q psy12647        371 RQHVRQHTDERPFPCP  386 (410)
Q Consensus       371 ~~H~~~h~~~~~~~C~  386 (410)
                      ..|+++|++++||+|.
T Consensus       139 ~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          139 KKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHSSTTTTSCCCSCSC
T ss_pred             HHHHHHhcCCCCCCCC
Confidence            9999999999999885

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=5.2e-21  Score=149.61  Aligned_cols=113  Identities=27%  Similarity=0.618  Sum_probs=104.3

Q ss_pred             cCCCCCCCccchhhhhhcCCcccccccchhcccCchhhcccccccCCCCcccccCcccccccccChhhHHHHHHcC---C
Q psy12647        247 TDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTH---A  323 (410)
Q Consensus       247 ~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~---~  323 (410)
                      .++++|.|+.|++.|....                 .|..|++.|.++ ++|.|+  .|++.|.+...|..|+..+   .
T Consensus         3 ~~~~~~~C~~C~~~f~~~~-----------------~l~~H~~~h~~~-~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKY-----------------YLKVHNRKHTGE-KPFECP--KCGKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHH-----------------HHHHHHHHHSSC-CSCBCT--TTCCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcCCCHH-----------------HHHHHHHhCCCC-CCeECC--CCCchhcCHHHHHHHHhhhhcCC
Confidence            4678899999999999887                 999999999986 999999  9999999999999999864   2


Q ss_pred             --CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHH-hhcCC
Q psy12647        324 --IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDE  380 (410)
Q Consensus       324 --~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  380 (410)
                        ++|.|++|++.|.+...|..|+ .+|.+++||.|++|++.|.....|..|++ .|.++
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHM-VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHH-HHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence              7899999999999999999998 89999999999999999999999999998 56654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=3.6e-21  Score=150.56  Aligned_cols=114  Identities=32%  Similarity=0.699  Sum_probs=99.9

Q ss_pred             CCCCCCc--cchhhhhhcCCcccccccchhcccCchhhcccccccCCCCcccccCcccccccccChhhHHHHHHcCC--C
Q psy12647        249 ERPFPCP--VCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--I  324 (410)
Q Consensus       249 ~~~~~C~--~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~  324 (410)
                      +++|.|+  .|++.|.+..                 .|..|++.| ++ ++|.|+  .|++.|.+...|..|++.|.  +
T Consensus         3 ~~~~~C~~~~C~~~f~~~~-----------------~l~~H~~~h-~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   61 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNS-----------------AMRKHLHTH-GP-RVHVCA--ECGKAFVESSKLKRHQLVHTGEK   61 (124)
T ss_dssp             --CEECCSTTCCCEESSHH-----------------HHHHHHGGG-SC-CCEECT--TTCCEESSHHHHHHHGGGTSCCC
T ss_pred             CCcccCCCCCCcCccCCHH-----------------HHHHHHHHc-CC-CCeECC--CCCchhCCHHHHHHHHHHcCCCC
Confidence            5678998  8999999887                 999999998 54 899999  99999999999999999987  7


Q ss_pred             Cccccc--ccCccCChhhHHHHHHhhcCCCCCcccC--cCcccccCcHhHHHHHHhhcCCCCcc
Q psy12647        325 QYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFP  384 (410)
Q Consensus       325 ~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  384 (410)
                      +|.|.+  |++.|.+...|..|+ .+|.++++|.|+  .|++.|.+.++|..|+++|+++++++
T Consensus        62 ~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           62 PFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHH-HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             CeeCCCCCCcCccCCHHHHHHHH-HHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            899986  999999999999998 899999999996  59999999999999999999998764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=4e-21  Score=149.14  Aligned_cols=112  Identities=34%  Similarity=0.734  Sum_probs=104.1

Q ss_pred             cCCCCCCCcc--chhhhhhcCCcccccccchhcccCchhhcccccccCCCCcccccCcccccccccChhhHHHHHHcCC-
Q psy12647        247 TDERPFPCPV--CQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA-  323 (410)
Q Consensus       247 ~~~~~~~C~~--C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~-  323 (410)
                      .++++|.|+.  |++.|....                 .|..|++.|.++ ++|.|+++.|++.|.+...|..|++.|. 
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~-----------------~l~~H~~~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   63 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLS-----------------HLQMHSRKHTGE-KPYQCDFKDCERRFSRSDQLKRHQRRHTG   63 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHH-----------------HHHHHHHHHHTT-CCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred             CCCeeeeCCCCCCcchhCCHH-----------------HHHHHHHhhCCC-CCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence            4678899987  999999887                 999999999886 9999985569999999999999999986 


Q ss_pred             -CCcccccccCccCChhhHHHHHHhhcCCCCCccc--CcCcccccCcHhHHHHHHhh
Q psy12647        324 -IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPC--TQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       324 -~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  377 (410)
                       ++|.|++|++.|.+...|..|+ .+|.+++||.|  +.|++.|.+...|..|+++|
T Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           64 VKPFQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCccCCccCchhCCHHHHHHHH-HHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence             7899999999999999999998 89999999999  89999999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=2.2e-20  Score=152.08  Aligned_cols=111  Identities=31%  Similarity=0.580  Sum_probs=103.3

Q ss_pred             CcccccCcccccccccChhhHHHHHHc-CC--CC--------cccccccCccCChhhHHHHHHhhcCCCCCcccCc--Cc
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVST-HA--IQ--------YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CP  361 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-~~--~~--------~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~  361 (410)
                      ..+|.|.  .|++.|.+...|..|++. |.  .+        |.|.+|++.|.+...|..|+ .+|.++++|.|++  |+
T Consensus        23 ~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           23 QLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CCSSSCC--CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHT-HHHHCCCSEECSCTTTC
T ss_pred             hcccccc--cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHH-HhcCCCCcccCCcCCCC
Confidence            4889999  999999999999999998 44  22        89999999999999999998 8999999999998  99


Q ss_pred             ccccCcHhHHHHHHhhcCCCCccCcc--ccccccccccCccCCCCCCCC
Q psy12647        362 GKFYSAYELRQHVRQHTDERPFPCPV--CQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       362 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      +.|.....|..|+++|+++++|+|.+  |++.|..+..|..|++.++++
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            99999999999999999999999997  999999999999999976654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.78  E-value=1.2e-20  Score=148.22  Aligned_cols=53  Identities=26%  Similarity=0.631  Sum_probs=37.1

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcC
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKG  265 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~  265 (410)
                      |.+.+|.|+++|.|++|++.|.....|..|+++|.+++||.|+.|++.|....
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   64 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAE   64 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeeccccc
Confidence            34467778888888888888888888888888777665555555555555444

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1e-18  Score=129.91  Aligned_cols=83  Identities=27%  Similarity=0.562  Sum_probs=50.4

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHH
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH  373 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  373 (410)
                      ++|.|.  .|++.|.+...|..|++.|.  ++|.|.+|++.|.....|..|+ .+|.++++|.|++|++.|.....|..|
T Consensus         7 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            7 GPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             cCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            566666  66666666666666666555  4566666666666666666665 556666666666666666666666666


Q ss_pred             HHhhcCCC
Q psy12647        374 VRQHTDER  381 (410)
Q Consensus       374 ~~~h~~~~  381 (410)
                      +++|++++
T Consensus        84 ~~~h~~~~   91 (96)
T 2dmd_A           84 LRSHTGDS   91 (96)
T ss_dssp             HTTCCSCC
T ss_pred             HHHhcCCC
Confidence            66665554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.7e-18  Score=131.38  Aligned_cols=97  Identities=19%  Similarity=0.300  Sum_probs=90.3

Q ss_pred             cccccccCCCCcccccCcccccccccChhhHHHHHHcCCCCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccc
Q psy12647        285 ISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKF  364 (410)
Q Consensus       285 ~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  364 (410)
                      ..+++.|.++ ++|.|.  .|++.|.+...|..|++.|.++|.|.+|++.|.....|..|+ . |.+++||.|++|++.|
T Consensus         5 ss~~~~h~~~-~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f   79 (107)
T 1wjp_A            5 SSGASPVENK-EVYQCR--LCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTF   79 (107)
T ss_dssp             CCCCCCCCCC-CCCBCT--TTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEEC
T ss_pred             cccCcccCCC-cCeECC--CCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchh
Confidence            3456677776 999999  999999999999999999889999999999999999999998 5 9999999999999999


Q ss_pred             cCcHhHHHHHH-hhcCCCCccCc
Q psy12647        365 YSAYELRQHVR-QHTDERPFPCP  386 (410)
Q Consensus       365 ~~~~~l~~H~~-~h~~~~~~~C~  386 (410)
                      .....|..|++ +|.++++|.|.
T Consensus        80 ~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           80 KSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999997 99999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=9.5e-19  Score=129.75  Aligned_cols=84  Identities=26%  Similarity=0.562  Sum_probs=58.2

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCC--CCccCccccccccccccCccC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE--RPFPCPVCQRTFRRKVCTTPS  401 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H  401 (410)
                      ++|.|.+|++.|.+...|..|+ .+|.++++|.|++|++.|.....|..|+++|+++  ++|+|.+|++.|..+..|..|
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHH-HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHH-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence            4566667777777777777776 5666677777777777777777777777777665  667777777777777777777


Q ss_pred             CCCCCCC
Q psy12647        402 PQPQHLD  408 (410)
Q Consensus       402 ~~~~H~~  408 (410)
                      ++..|.+
T Consensus        85 ~~~~H~~   91 (95)
T 2yt9_A           85 IKQVHSG   91 (95)
T ss_dssp             HHHTSCC
T ss_pred             HHHhcCC
Confidence            7666654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=1.2e-17  Score=126.38  Aligned_cols=88  Identities=25%  Similarity=0.554  Sum_probs=84.0

Q ss_pred             CcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHH
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQ  372 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~  372 (410)
                      +++|.|.  .|++.|.+...|..|++.|.  ++|.|.+|++.|.....|..|+ .+|.++++|.|++|++.|.....|..
T Consensus        15 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           15 KKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR-YIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCBCS--SSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CcCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHH-HHhCCCCCeECCCcCCcccCHHHHHH
Confidence            4899999  99999999999999999987  7899999999999999999998 89999999999999999999999999


Q ss_pred             HHHhhcCCCCccC
Q psy12647        373 HVRQHTDERPFPC  385 (410)
Q Consensus       373 H~~~h~~~~~~~C  385 (410)
                      |+++|+++++|..
T Consensus        92 H~~~H~~~~~~~~  104 (106)
T 2ee8_A           92 HKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHTTSCCCCCC
T ss_pred             HHHHhCCCCCCcC
Confidence            9999999999865

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=3.8e-19  Score=127.99  Aligned_cols=80  Identities=28%  Similarity=0.715  Sum_probs=63.6

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  404 (410)
                      +|.|.+|++.|.+...|..|+ .+|.++++|.|+.|++.|.....|..|+++|+++++|+|.+|++.|.++..|..|++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            477888888888888888887 6777778888888888888888888888888888888888888888888888887765


Q ss_pred             C
Q psy12647        405 Q  405 (410)
Q Consensus       405 ~  405 (410)
                      .
T Consensus        80 H   80 (82)
T 2kmk_A           80 H   80 (82)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=7.5e-18  Score=129.65  Aligned_cols=101  Identities=18%  Similarity=0.247  Sum_probs=90.7

Q ss_pred             hhhcccccccCCCCcccccCcccccccccChhhHHHHHHc--CC--C-CcccccccCcc--CChhhHHHHHHhhcCCCCC
Q psy12647        282 QELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVST--HA--I-QYTCHMCGHMF--TCKRRLTQHLARLHTGSLS  354 (410)
Q Consensus       282 ~~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--~~--~-~~~C~~C~~~f--~~~~~l~~H~~~~H~~~~~  354 (410)
                      ..|..|++.|.++ ++|.|.  .|++.|.+...|..|++.  +.  + .+.|.+|++.|  .....|..|+ .+|.+++|
T Consensus         5 ~~l~~H~~~H~~~-~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~   80 (115)
T 2dmi_A            5 SSGKLYGSIFTGA-SKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKV   80 (115)
T ss_dssp             CCCCCCCCCCCCC-CSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSS
T ss_pred             hhhhhheeeeCCC-CCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCCcc
Confidence            3899999999986 999999  999999999999999998  54  3 45699999999  8999999998 89999999


Q ss_pred             cccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |.|++|++.|....+|..|+++|+.......+
T Consensus        81 ~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           81 LKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             eECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            99999999999999999999998877655543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.4e-17  Score=122.35  Aligned_cols=84  Identities=33%  Similarity=0.634  Sum_probs=81.3

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQ  403 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  403 (410)
                      ++|.|.+|++.|.+...|..|+ .+|.++++|.|++|++.|.....|..|+++|+++++|+|.+|++.|..+..|..|++
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHT
T ss_pred             cCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            6899999999999999999998 899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy12647        404 PQHLD  408 (410)
Q Consensus       404 ~~H~~  408 (410)
                      ..|++
T Consensus        86 ~h~~~   90 (96)
T 2dmd_A           86 SHTGD   90 (96)
T ss_dssp             TCCSC
T ss_pred             HhcCC
Confidence            88765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.70  E-value=4.9e-18  Score=128.63  Aligned_cols=83  Identities=29%  Similarity=0.563  Sum_probs=79.5

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQ  403 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  403 (410)
                      ++|.|.+|++.|.....|..|+ .+|.++++|.|++|++.|.....|..|+++|+++++|+|.+|++.|..+..|..|++
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            6899999999999999999998 899999999999999999999999999999999999999999999999999999997


Q ss_pred             CCCC
Q psy12647        404 PQHL  407 (410)
Q Consensus       404 ~~H~  407 (410)
                      .++.
T Consensus        95 ~H~~   98 (106)
T 2ee8_A           95 LHMQ   98 (106)
T ss_dssp             HTTS
T ss_pred             HhCC
Confidence            6654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=1.9e-19  Score=138.71  Aligned_cols=97  Identities=14%  Similarity=0.160  Sum_probs=87.4

Q ss_pred             ChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhh--cCCCCCc-ccCcCcccc--cCcHhHHHHHHhhcCCCCc
Q psy12647        311 SASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARL--HTGSLSY-PCTQCPGKF--YSAYELRQHVRQHTDERPF  383 (410)
Q Consensus       311 ~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~--H~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~  383 (410)
                      +.+.|..|+++|.  ++|.|.+|++.|.....|..|+ .+  |.+++++ .|++|++.|  .....|..|+++|++++||
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHH-HHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            4567888888887  8999999999999999999998 66  6667765 499999999  9999999999999999999


Q ss_pred             cCccccccccccccCccCCCCCCCC
Q psy12647        384 PCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       384 ~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      +|.+|++.|..+..|..|++..|..
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCc
Confidence            9999999999999999999887753

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=2.9e-18  Score=125.75  Aligned_cols=84  Identities=33%  Similarity=0.719  Sum_probs=40.5

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHH
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH  373 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  373 (410)
                      ++|.|+.+.|++.|.+...|..|++.|.  ++|.|..|++.|.+...|..|+ .+|.+++||.|++|++.|...+.|..|
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHH-HHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4455542235555555555555544443  4455555555555555555554 444444555555555555555555555


Q ss_pred             HHhhcCC
Q psy12647        374 VRQHTDE  380 (410)
Q Consensus       374 ~~~h~~~  380 (410)
                      +++|+++
T Consensus        82 ~~~H~~~   88 (90)
T 1a1h_A           82 TKIHLRQ   88 (90)
T ss_dssp             HGGGGC-
T ss_pred             HHHhccc
Confidence            5554444

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=1.3e-17  Score=122.24  Aligned_cols=83  Identities=33%  Similarity=0.690  Sum_probs=78.9

Q ss_pred             CCcccc--cccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccC
Q psy12647        324 IQYTCH--MCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPS  401 (410)
Q Consensus       324 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  401 (410)
                      ++|.|+  .|++.|.....|..|+ .+|.++++|.|+.|++.|.....|..|+++|+++++|+|.+|++.|..+..|..|
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            589998  5999999999999998 8999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q psy12647        402 PQPQHL  407 (410)
Q Consensus       402 ~~~~H~  407 (410)
                      ++..++
T Consensus        82 ~~~H~~   87 (90)
T 1a1h_A           82 TKIHLR   87 (90)
T ss_dssp             HGGGGC
T ss_pred             HHHhcc
Confidence            987654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.67  E-value=3.4e-17  Score=117.68  Aligned_cols=80  Identities=31%  Similarity=0.660  Sum_probs=76.0

Q ss_pred             ccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHH
Q psy12647        297 RYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHV  374 (410)
Q Consensus       297 ~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  374 (410)
                      ||.|.  .|++.|.+...|..|++.|.  ++|.|..|++.|.....|..|+ .+|.++++|.|++|++.|.+.++|..|+
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            58899  99999999999999999876  8899999999999999999998 8999999999999999999999999999


Q ss_pred             HhhcC
Q psy12647        375 RQHTD  379 (410)
Q Consensus       375 ~~h~~  379 (410)
                      ++|+|
T Consensus        78 ~~H~g   82 (82)
T 2kmk_A           78 RKHTG   82 (82)
T ss_dssp             HHHC-
T ss_pred             HhhCC
Confidence            99975

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=9.8e-18  Score=127.87  Aligned_cols=79  Identities=35%  Similarity=0.738  Sum_probs=46.2

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHH
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH  373 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  373 (410)
                      ++|.|   .|++.|.+...|..|++.|.  ++|.|.+|++.|.....|..|+ .+|.++++|.|++|++.|.....|..|
T Consensus         9 k~~~C---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            9 KLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCEEC---TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCEec---cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHH-HHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            55555   26666666666666655554  4556666666666666666665 555555556666666666666666666


Q ss_pred             HHhhc
Q psy12647        374 VRQHT  378 (410)
Q Consensus       374 ~~~h~  378 (410)
                      +++|+
T Consensus        85 ~~~~~   89 (110)
T 2csh_A           85 VTSCT   89 (110)
T ss_dssp             HHHHH
T ss_pred             HHHcc
Confidence            55554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.65  E-value=4.2e-17  Score=108.12  Aligned_cols=57  Identities=25%  Similarity=0.591  Sum_probs=41.3

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|.+|++.|...+.|..|+ ++|++++||.|++|++.|...++|..|+++|+|++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHR-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCccCCCCCCEeCCHHHHHHHH-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            4677777777777777777776 67777777777777777777777777777777653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.65  E-value=3.8e-17  Score=119.43  Aligned_cols=80  Identities=39%  Similarity=0.719  Sum_probs=66.6

Q ss_pred             CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccC--cCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCc
Q psy12647        324 IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTT  399 (410)
Q Consensus       324 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  399 (410)
                      .+|.|.+  |++.|.+...|..|+ .+|.++++|.|+  .|++.|.....|..|+++|+++++|+|.+|++.|..+..|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH-TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            4678888  888888888888887 778888888886  58888888888888888888888888888888888888888


Q ss_pred             cCCCC
Q psy12647        400 PSPQP  404 (410)
Q Consensus       400 ~H~~~  404 (410)
                      .|++.
T Consensus        83 ~H~~~   87 (89)
T 2wbs_A           83 LHMKR   87 (89)
T ss_dssp             HHGGG
T ss_pred             HHHHh
Confidence            88764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.63  E-value=3.7e-17  Score=108.42  Aligned_cols=57  Identities=26%  Similarity=0.524  Sum_probs=53.6

Q ss_pred             CCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        351 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       351 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      .|+||.|++|++.|...+.|..|+++|+|++||+|.+||++|..++.|..|++. |.+
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-Htg   57 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV-HQN   57 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG-GSC
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc-cCC
Confidence            379999999999999999999999999999999999999999999999999975 543

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.63  E-value=3e-18  Score=125.01  Aligned_cols=82  Identities=21%  Similarity=0.374  Sum_probs=74.6

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQ  403 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  403 (410)
                      ++|.|.+|++.|...+.|..|+ .+|.+++||.|+.|++.|.....|..|+++|++ .+|.|..|++.|..+..|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            5789999999999999999998 789999999999999999999999999999886 78999999999999999999998


Q ss_pred             CCCC
Q psy12647        404 PQHL  407 (410)
Q Consensus       404 ~~H~  407 (410)
                      ..|.
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=6.4e-16  Score=114.32  Aligned_cols=83  Identities=31%  Similarity=0.655  Sum_probs=77.7

Q ss_pred             CcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCC--CCcccCcCcccccCcHhH
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGS--LSYPCTQCPGKFYSAYEL  370 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~--~~~~C~~C~~~f~~~~~l  370 (410)
                      +++|.|.  .|++.|.+...|..|++.|.  ++|.|.+|++.|.....|..|+ .+|.++  ++|.|++|++.|.....|
T Consensus         5 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            5 SSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CSCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHH-HHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhcCCCCCceECCCccchhCCHHHH
Confidence            4899999  99999999999999999987  7899999999999999999998 788876  999999999999999999


Q ss_pred             HHHHH-hhcCC
Q psy12647        371 RQHVR-QHTDE  380 (410)
Q Consensus       371 ~~H~~-~h~~~  380 (410)
                      ..|++ +|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99996 78765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3e-16  Score=111.76  Aligned_cols=69  Identities=25%  Similarity=0.595  Sum_probs=63.5

Q ss_pred             CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCcHhHHHHHHhhcCCCCccCccccccc
Q psy12647        324 IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDERPFPCPVCQRTF  392 (410)
Q Consensus       324 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  392 (410)
                      ++|.|..  |++.|.+...|..|++.+|.++++|.|++  |++.|.....|..|+++|++++||+|.+|+++|
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4677776  99999999999999844899999999999  999999999999999999999999999999998

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.61  E-value=1.1e-16  Score=119.82  Aligned_cols=83  Identities=31%  Similarity=0.626  Sum_probs=54.1

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC--CCcccc--cccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHH
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCH--MCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELR  371 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  371 (410)
                      ++|.|.++.|++.|.+...|..|++.|.  ++|.|.  .|++.|.....|..|+ .+|.+++||.|++|++.|.....|.
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHH-HHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCcCccCCHHHHH
Confidence            5666764446666666666666666655  566664  4666666666666665 5666666666666666666666666


Q ss_pred             HHHHhhcC
Q psy12647        372 QHVRQHTD  379 (410)
Q Consensus       372 ~H~~~h~~  379 (410)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            66666653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.61  E-value=1e-15  Score=114.32  Aligned_cols=81  Identities=36%  Similarity=0.682  Sum_probs=76.8

Q ss_pred             CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccC--cCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCc
Q psy12647        324 IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTT  399 (410)
Q Consensus       324 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  399 (410)
                      ++|.|.+  |++.|.....|..|+ .+|.++++|.|+  .|++.|.....|..|+++|+++++|+|.+|++.|..+..|.
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHH-HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHH-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            6799997  999999999999998 889999999997  69999999999999999999999999999999999999999


Q ss_pred             cCCCCC
Q psy12647        400 PSPQPQ  405 (410)
Q Consensus       400 ~H~~~~  405 (410)
                      .|++.+
T Consensus        93 ~H~~~H   98 (100)
T 2ebt_A           93 LHMKRH   98 (100)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=7.8e-16  Score=116.58  Aligned_cols=96  Identities=19%  Similarity=0.309  Sum_probs=88.1

Q ss_pred             ccccccCCCcceeecCcccccccccChhHHHHHHhhCCCCcccccccccccChhHHHHHHhhhcCCCCccccCCCCcccC
Q psy12647        155 SHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFY  234 (410)
Q Consensus       155 ~h~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  234 (410)
                      .+++.+.++ ++|.|.  .|++.|.+...|..|+++|.++|.|.+|++.|.....|..|+ . |.++++|.|++|++.|.
T Consensus         6 s~~~~h~~~-~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~   80 (107)
T 1wjp_A            6 SGASPVENK-EVYQCR--LCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFK   80 (107)
T ss_dssp             CCCCCCCCC-CCCBCT--TTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECS
T ss_pred             ccCcccCCC-cCeECC--CCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhC
Confidence            345566665 899999  999999999999999999988999999999999999999998 5 99999999999999999


Q ss_pred             CHHHHHHHHH-HhcCCCCCCCc
Q psy12647        235 SAYELRQHVR-QHTDERPFPCP  255 (410)
Q Consensus       235 ~~~~l~~H~~-~~~~~~~~~C~  255 (410)
                      ....|..|++ .|.++++|.++
T Consensus        81 ~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           81 SSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999997 88899998875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=1.4e-16  Score=115.21  Aligned_cols=78  Identities=27%  Similarity=0.553  Sum_probs=70.4

Q ss_pred             Cccc--ccccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCcHhHHHHHHhhcCCCCccCcc---cccccccccc
Q psy12647        325 QYTC--HMCGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDERPFPCPV---CQRTFRRKVC  397 (410)
Q Consensus       325 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~  397 (410)
                      ||.|  +.|++.|...+.|..|+ .+|.+++||.|++  |++.|.....|..|+++|++   |+|.+   |++.|...+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5889  88999999999999998 8899999999988  99999999999999999998   99999   9999999999


Q ss_pred             CccCCCCCC
Q psy12647        398 TTPSPQPQH  406 (410)
Q Consensus       398 l~~H~~~~H  406 (410)
                      |..|++..|
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999987665

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.57  E-value=1.7e-15  Score=110.52  Aligned_cols=82  Identities=30%  Similarity=0.646  Sum_probs=76.6

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC--CCcccc--cccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHH
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCH--MCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELR  371 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  371 (410)
                      ++|.|..+.|++.|.+...|..|++.|.  ++|.|+  .|++.|.+...|..|+ .+|.+++||.|+.|++.|...+.|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCcccCCHHHHH
Confidence            7899993349999999999999999988  789997  5999999999999998 8999999999999999999999999


Q ss_pred             HHHHhhc
Q psy12647        372 QHVRQHT  378 (410)
Q Consensus       372 ~H~~~h~  378 (410)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999884

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=5.4e-17  Score=127.53  Aligned_cols=115  Identities=21%  Similarity=0.312  Sum_probs=86.9

Q ss_pred             cCCCCcccccCcccccccccChhhHHHHHHcCC-CCcccccccCccC------ChhhHHHHHHhhcCCCCCcccCcCccc
Q psy12647        291 HGGEERRYVCNHMQCTRRFHSASLLARHVSTHA-IQYTCHMCGHMFT------CKRRLTQHLARLHTGSLSYPCTQCPGK  363 (410)
Q Consensus       291 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~-~~~~C~~C~~~f~------~~~~l~~H~~~~H~~~~~~~C~~C~~~  363 (410)
                      +.|. ++|.|....+...|.....+..+..... +.+.|++|++.|.      ....|..|+  .|.+++||.|++|++.
T Consensus         7 ~~~~-k~~~~~~k~~~~~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~k~   83 (129)
T 2wbt_A            7 DSGS-KKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCLMP   83 (129)
T ss_dssp             CTTC-CGGGGCSSCEEEECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTCCE
T ss_pred             cccc-cccccccCCeeeeecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCCcc
Confidence            4454 8888873344444433322222211111 5688888887665      566677775  5888999999999999


Q ss_pred             ccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCCCC
Q psy12647        364 FYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL  410 (410)
Q Consensus       364 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  410 (410)
                      |....+|..|+++|  ++||+|.+|+++|..++.|..|++..|+++|
T Consensus        84 f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~v  128 (129)
T 2wbt_A           84 FSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNICV  128 (129)
T ss_dssp             ESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCCC
T ss_pred             cCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCccC
Confidence            99999999999999  7999999999999999999999999998875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.7e-15  Score=113.43  Aligned_cols=82  Identities=28%  Similarity=0.581  Sum_probs=78.4

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQ  403 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  403 (410)
                      ++|.| .|++.|.+...|..|+ ..|.++++|.|++|++.|.....|..|+++|+++++|+|.+|++.|..+..|..|++
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVT   86 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCEec-cCCCccCCHHHHHHHH-HHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHH
Confidence            78999 9999999999999998 889999999999999999999999999999999999999999999999999999997


Q ss_pred             CCCC
Q psy12647        404 PQHL  407 (410)
Q Consensus       404 ~~H~  407 (410)
                      ..|.
T Consensus        87 ~~~~   90 (110)
T 2csh_A           87 SCTK   90 (110)
T ss_dssp             HHHH
T ss_pred             Hccc
Confidence            6553

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.3e-15  Score=109.05  Aligned_cols=76  Identities=20%  Similarity=0.391  Sum_probs=56.5

Q ss_pred             HHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCC---CCcccCcCcccccCcHhHHHHHHhhcCCCCccCcccccc
Q psy12647        317 RHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGS---LSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRT  391 (410)
Q Consensus       317 ~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  391 (410)
                      +|+++|.  ++|.|.+|++.|.....|..|++..|..+   ++|.|++|++.|.....|..|+++|++++++.|..|+.+
T Consensus         5 ~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             CCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             cccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            3444444  45666677777777777777774444443   788899999999999999999999988888999888876


Q ss_pred             c
Q psy12647        392 F  392 (410)
Q Consensus       392 f  392 (410)
                      |
T Consensus        85 ~   85 (86)
T 1x6h_A           85 S   85 (86)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=1.3e-15  Score=108.80  Aligned_cols=61  Identities=25%  Similarity=0.369  Sum_probs=38.3

Q ss_pred             hcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        348 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       348 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      ++..+++|.|++|++.|.....|.+|+++|++++||+|.+|+++|..+..|.+|++..|.+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            4445556666666666666666666666666666666666666666666666666666654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=7.6e-15  Score=103.80  Aligned_cols=61  Identities=34%  Similarity=0.660  Sum_probs=55.8

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  385 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  385 (410)
                      ++|.|.+|++.|.....|..|+ .+|.+++||.|++|++.|.....|..|+++|++++||+|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            5788888999999999999998 889999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=4.3e-15  Score=110.03  Aligned_cols=67  Identities=24%  Similarity=0.364  Sum_probs=59.3

Q ss_pred             CCcccccccCccCChhhHHHHHHhhc---CCCCCcccCcCcccccCcHhHHHH-HHhhcCCCCccCccccc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLH---TGSLSYPCTQCPGKFYSAYELRQH-VRQHTDERPFPCPVCQR  390 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  390 (410)
                      ++|.|.+|++.|...+.|..|++.+|   .+++||.|++|++.|...+.|..| +++|+|++||+|.++..
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            67888999999999999999985579   668999999999999999999999 89999999999988543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=4e-14  Score=99.21  Aligned_cols=59  Identities=34%  Similarity=0.747  Sum_probs=54.5

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF  383 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  383 (410)
                      ++|+|..|++.|.....|..|+ .+|.++++|.|++|++.|.....|..|+++|++++||
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHH-HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHH-HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            6788999999999999999998 8899999999999999999999999999999999886

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5.4e-14  Score=99.92  Aligned_cols=70  Identities=26%  Similarity=0.561  Sum_probs=64.7

Q ss_pred             CcccccCcccccccccChhhHHHHHH-cCC--CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccCcCccccc
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVS-THA--IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFY  365 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~~~--~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  365 (410)
                      +++|.|.++.|++.|.+...|..|++ .|.  ++|.|.+  |++.|.....|..|+ .+|.+++||.|++|++.|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH-HHhCCCCCeeCCCCCCCCC
Confidence            38899996669999999999999999 565  8999999  999999999999998 8999999999999999983

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.45  E-value=4e-14  Score=102.13  Aligned_cols=78  Identities=29%  Similarity=0.623  Sum_probs=71.5

Q ss_pred             ccccCcccccccccChhhHHHHHHcCC--CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccCc---CcccccCcHh
Q psy12647        297 RYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ---CPGKFYSAYE  369 (410)
Q Consensus       297 ~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~---C~~~f~~~~~  369 (410)
                      ||.|.++.|++.|.+...|..|+++|.  ++|.|++  |++.|.+...|..|+ .+|.+   |.|+.   |++.|...+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCC---CCCCCCCCCCCccCCHHH
Confidence            588932399999999999999999886  8999999  999999999999998 78887   99999   9999999999


Q ss_pred             HHHHHHhhc
Q psy12647        370 LRQHVRQHT  378 (410)
Q Consensus       370 l~~H~~~h~  378 (410)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.44  E-value=4.5e-15  Score=107.98  Aligned_cols=80  Identities=21%  Similarity=0.495  Sum_probs=73.5

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHH
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH  373 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  373 (410)
                      ++|.|+  .|++.|.+...|..|+++|.  ++|.|++|++.|.....|..|+ .+|. ..+|.|+.|++.|.....|..|
T Consensus         2 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~-~~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            2 KPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQH-ILPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH-HHHT-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCC--CCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHH-HHhC-CCcchHHHHHHHHHHHhhhHHH
Confidence            789999  99999999999999999987  7899999999999999999998 5555 3889999999999999999999


Q ss_pred             HHhhcC
Q psy12647        374 VRQHTD  379 (410)
Q Consensus       374 ~~~h~~  379 (410)
                      ++.+++
T Consensus        78 ~~~~h~   83 (88)
T 1llm_C           78 VARLKK   83 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            987653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3.2e-15  Score=111.06  Aligned_cols=78  Identities=14%  Similarity=0.212  Sum_probs=68.4

Q ss_pred             cccChhhHHHHHHcCC--CCcccccccCccC-ChhhHHHHHHhhcCC-CCCcccCcCcccccCcHhHHHHHHhhcCCCCc
Q psy12647        308 RFHSASLLARHVSTHA--IQYTCHMCGHMFT-CKRRLTQHLARLHTG-SLSYPCTQCPGKFYSAYELRQHVRQHTDERPF  383 (410)
Q Consensus       308 ~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~-~~~~l~~H~~~~H~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  383 (410)
                      .+.....+..|++.|.  ++|.|.+|++.|. ....|..|+ .+|.+ ++||.|++|++.|.....|..|+++|++++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~-~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHM-EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHH-HHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHH-HHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            4566677888999887  8899999999999 999999998 77887 89999999999999999999999999999886


Q ss_pred             cCc
Q psy12647        384 PCP  386 (410)
Q Consensus       384 ~C~  386 (410)
                      .-.
T Consensus        84 ~~~   86 (98)
T 2gqj_A           84 DAE   86 (98)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3.4e-14  Score=105.47  Aligned_cols=73  Identities=15%  Similarity=0.199  Sum_probs=52.3

Q ss_pred             ccCChhhHHHHHHhhcCCCCCcccCcCccccc-CcHhHHHHHHhhcC-CCCccCccccccccccccCccCCCCCCC
Q psy12647        334 MFTCKRRLTQHLARLHTGSLSYPCTQCPGKFY-SAYELRQHVRQHTD-ERPFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       334 ~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      .+.....+..|+ .+|.++++|.|++|++.|. ....|..|+++|++ +++|+|.+|++.|..+..|..|++..|.
T Consensus         5 s~~~~~~~~~h~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            5 SSGPGGPEEQWQ-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCSCSHHH-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCcHHHHH-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            344455566676 6777777777777777777 77777777777777 7777777777777777777777766654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.2e-13  Score=101.73  Aligned_cols=78  Identities=15%  Similarity=0.258  Sum_probs=66.5

Q ss_pred             cccccChhhHHHHHHcCC--CCcccccccCcc-CChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHH-HHhhcCCC
Q psy12647        306 TRRFHSASLLARHVSTHA--IQYTCHMCGHMF-TCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQH-VRQHTDER  381 (410)
Q Consensus       306 ~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  381 (410)
                      ...|.....|..|.+.+.  ++|.|+.|++.| .....|..|+ .+| +++||.|++|++.|.....|..| +++|+++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~-~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHM-ENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHH-HHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHH-HHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            345677788888887765  889999999999 9999999998 888 99999999999999999999999 88998755


Q ss_pred             CccC
Q psy12647        382 PFPC  385 (410)
Q Consensus       382 ~~~C  385 (410)
                      .|.+
T Consensus        91 ~~~~   94 (96)
T 2ctd_A           91 SGPS   94 (96)
T ss_dssp             SCSC
T ss_pred             CCCC
Confidence            4544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=3.1e-14  Score=95.26  Aligned_cols=54  Identities=30%  Similarity=0.669  Sum_probs=27.9

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHH-HhhcC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHV-RQHTD  379 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~  379 (410)
                      +|.|.+|++.|.....|..|+ .+|.+++||.|+.|++.|.....|..|+ ++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHH-HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            455555555555555555554 4455555555555555555555555554 34443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.3e-14  Score=106.92  Aligned_cols=75  Identities=15%  Similarity=0.212  Sum_probs=67.9

Q ss_pred             cCccCChhhHHHHHHhhcCCCCCcccCcCcccc-cCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        332 GHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKF-YSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       332 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      ..+|.....|..|+ ..|.++++|.|+.|++.| ....+|..|+++| ++++|+|.+|+++|..+..|..|+...|..
T Consensus        13 ~~~~~~~~~~~~~~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           13 PPVYAAGSLEEQWY-LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CCSSCTTCHHHHHH-HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCCCchHHHHHH-HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            45778888999997 888999999999999999 9999999999999 999999999999999999999995455654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.43  E-value=9.4e-15  Score=96.74  Aligned_cols=53  Identities=34%  Similarity=0.642  Sum_probs=29.4

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      +|.|.+|++.|.+...|..|+ .+|.+++||.|++|++.|.....|..|+++|+
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHL-RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CccCCCCcchhCChHHHHHHH-HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            455555555555555555555 45555555555555555555555555555554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=4.7e-15  Score=104.90  Aligned_cols=63  Identities=29%  Similarity=0.562  Sum_probs=34.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHH-hhcCC-CCccCccccccccccccCccCCCCCCC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDE-RPFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      |+ ++|.+++||.|++|++.|....+|..|++ .|.++ ++|+|.+|++.|..+..|..|++..|.
T Consensus         6 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            6 SG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CC-CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             cc-cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            44 45555555555555555555555555554 34432 455555555555555555555555554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=6.1e-15  Score=100.93  Aligned_cols=61  Identities=25%  Similarity=0.523  Sum_probs=40.6

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHh-h-cCCCCccCccccccccccccCccCCCCCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQ-H-TDERPFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      .+|.+++||.|+.|++.|....+|..|+++ | .+++||+|++|+++|..++.|..|++..|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456666667777777777777777777665 5 366667777777777766666666665553

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.7e-14  Score=100.54  Aligned_cols=56  Identities=38%  Similarity=0.670  Sum_probs=33.9

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      ++|.|.+|++.|.....|..|+ .+|.+++||.|++|++.|.....|..|+++|+++
T Consensus        13 k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A           13 KPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            4566666666666666666665 5566666666666666666666666666666554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.5e-14  Score=100.14  Aligned_cols=59  Identities=19%  Similarity=0.348  Sum_probs=52.4

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPF  383 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  383 (410)
                      ++|.|.+|++.|.....|..|+ .+|.++++|.|++|++.|.....|..|+++|++++|.
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHH-GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHH-HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            6899999999999999999998 7798899999999999999999999999999888764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=3.2e-13  Score=97.57  Aligned_cols=78  Identities=23%  Similarity=0.451  Sum_probs=72.2

Q ss_pred             hhcccccccCCCCcccccCcccccccccChhhHHHHHHcCC------CCcccccccCccCChhhHHHHHHhhcCCCCCcc
Q psy12647        283 ELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA------IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYP  356 (410)
Q Consensus       283 ~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~------~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  356 (410)
                      .+..|+++|.++ ++|.|.  .|++.|.....|..|++.++      ++|.|.+|++.|.....|..|+ .+|.+++++.
T Consensus         2 s~~~H~~~H~~~-k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~~~~   77 (86)
T 1x6h_A            2 SSGSSGRTHTGE-KPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA-DNCAGPDGVE   77 (86)
T ss_dssp             TTTCCSTTCCCC-CCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH-HHCCCCCSCC
T ss_pred             CcccccceecCC-CCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH-HHccCCCCcc
Confidence            467899999986 999999  99999999999999998766      4699999999999999999998 9999999999


Q ss_pred             cCcCcccc
Q psy12647        357 CTQCPGKF  364 (410)
Q Consensus       357 C~~C~~~f  364 (410)
                      |..|+.+|
T Consensus        78 ~~~~~~~~   85 (86)
T 1x6h_A           78 GENSGPSS   85 (86)
T ss_dssp             CCCCCCCC
T ss_pred             cCCCCCCC
Confidence            99999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2e-14  Score=101.88  Aligned_cols=59  Identities=24%  Similarity=0.480  Sum_probs=31.7

Q ss_pred             cCCCCCcccCcCcccccCcHhHHHHHHhhcC---CCCccCccccccccccccCccCCCCCCC
Q psy12647        349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTD---ERPFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       349 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      |++++||.|++|++.|.....|..|+++|++   +++|+|.+|++.|..+..|..|++..|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            4455555555555555555555555555553   4555555555555555555555554444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.40  E-value=2.4e-13  Score=89.79  Aligned_cols=56  Identities=29%  Similarity=0.591  Sum_probs=49.4

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ||.|.+|++.|.....|..|+ .+|.+++||.|+.|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            588999999999999999997 78888999999999999999999999999888765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.9e-13  Score=93.61  Aligned_cols=61  Identities=25%  Similarity=0.397  Sum_probs=50.3

Q ss_pred             hcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        348 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       348 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      .|.++++|.|++|++.|.....|..|+++|+++++|+|.+|++.|..+..|..|++..|.+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            5677888888888888888888888888888888888888888888888888888776653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.38  E-value=4.4e-14  Score=110.76  Aligned_cols=80  Identities=25%  Similarity=0.433  Sum_probs=70.0

Q ss_pred             cccccCccccccccc------ChhhHHHHHHcCC-CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcH
Q psy12647        296 RRYVCNHMQCTRRFH------SASLLARHVSTHA-IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAY  368 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~------~~~~l~~H~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~  368 (410)
                      +.+.|+  .|...|.      ....|..|++-.. ++|.|.+|++.|.....|..|+ .+|  ++||.|+.|++.|...+
T Consensus        40 ~~~~c~--~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H--~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           40 KRLIRA--IVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHI-RYT--EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHH--HHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHH-HHT--CCCCBCTTTCCBCSSHH
T ss_pred             Ccccch--hhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHH-HHC--CCCCCCCCCCcccCCHH
Confidence            677888  8877665      6677777774222 9999999999999999999998 788  89999999999999999


Q ss_pred             hHHHHHHhhcCC
Q psy12647        369 ELRQHVRQHTDE  380 (410)
Q Consensus       369 ~l~~H~~~h~~~  380 (410)
                      .|..|+++|+++
T Consensus       115 ~l~~H~~~h~~~  126 (129)
T 2wbt_A          115 SALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCc
Confidence            999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=5.7e-14  Score=98.13  Aligned_cols=66  Identities=29%  Similarity=0.606  Sum_probs=55.9

Q ss_pred             hhHHHHHHhhcCCCCCcccC--cCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCC
Q psy12647        339 RRLTQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       339 ~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  404 (410)
                      ..+..|+..+|+++++|.|+  .|++.|.....|..|+++|.++++|+|.+|+++|..+..|..|++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            34566777888999999997  5999999999999999999999999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=4.7e-13  Score=95.39  Aligned_cols=57  Identities=35%  Similarity=0.727  Sum_probs=48.0

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHH-hhcCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDER  381 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  381 (410)
                      ++|.|++|++.|.....|..|+ ++|.+++||.|++|++.|....+|.+|++ +|.+++
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHL-RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHH-HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECCCCCCCcCcHHHHhhhh-hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4688888888888888888887 78888889999999999999999999974 677664

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.36  E-value=4.4e-13  Score=88.55  Aligned_cols=56  Identities=34%  Similarity=0.616  Sum_probs=50.1

Q ss_pred             CCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCC
Q psy12647        351 GSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQH  406 (410)
Q Consensus       351 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  406 (410)
                      +++||.|++|++.|.....|..|+++|++++||+|.+|+++|..+..|..|++..|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999999999999999998776

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.35  E-value=1.6e-13  Score=90.74  Aligned_cols=55  Identities=29%  Similarity=0.598  Sum_probs=52.4

Q ss_pred             CcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      ||.|+.|++.|.....|..|+++|++++||+|.+|+++|..+..|..|++..+.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            6999999999999999999999999999999999999999999999999887654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=1.1e-12  Score=96.61  Aligned_cols=63  Identities=25%  Similarity=0.433  Sum_probs=57.4

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCCCC--------cccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGSLS--------YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      .|.|..|++.|.....|..|++..|.++++        |.|++|++.|.....|..|+++|++++||+|..
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            478999999999999999998444999888        999999999999999999999999999999963

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=2.8e-13  Score=95.65  Aligned_cols=56  Identities=23%  Similarity=0.524  Sum_probs=37.2

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCC-CCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGS-LSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      ++|.|.+|++.|.....|..|++..|.++ ++|.|++|++.|.....|..|++++++
T Consensus        14 k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            34555566666666666666764466654 677777777777777777777776544

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=7.9e-13  Score=91.92  Aligned_cols=61  Identities=28%  Similarity=0.573  Sum_probs=54.6

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      .+|.+++||.|++|++.|.....|..|+++|++++||+|.+|++.|..+..|..|++..+.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            6788999999999999999999999999999999999999999999999999999876544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=1.5e-13  Score=96.22  Aligned_cols=61  Identities=23%  Similarity=0.517  Sum_probs=56.2

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      ..+.++++|.|+.|++.|.....|..|+++|+++++|+|.+|++.|..+..|..|++.+++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   70 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG   70 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence            5678899999999999999999999999999999999999999999999999999976543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.6e-12  Score=86.85  Aligned_cols=57  Identities=33%  Similarity=0.697  Sum_probs=53.4

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCCCCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDV  409 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  409 (410)
                      +||.|+.|++.|.....|..|+++|++++||+|.+|+++|..+..|..|++..|...
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999999999999999999999999998888764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=3e-12  Score=90.27  Aligned_cols=65  Identities=35%  Similarity=0.660  Sum_probs=60.0

Q ss_pred             cccCCCCcccccCcccccccccChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCccc
Q psy12647        289 SYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPC  357 (410)
Q Consensus       289 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  357 (410)
                      ..+.++ ++|.|.  .|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|+ .+|.+++||.|
T Consensus        11 ~~~~~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRER-RRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCS-CSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-GGSCCCCCCCC
T ss_pred             CcCCCC-CCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            344454 999999  99999999999999999997  7899999999999999999998 89999999998

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=5.6e-15  Score=103.31  Aligned_cols=71  Identities=18%  Similarity=0.221  Sum_probs=43.8

Q ss_pred             chhhcccccccCCCCcccccCcccccccccChhhHHHHHHcCCCCcccccccCccCChhhHHHHHHhhcCCCCCcccCcC
Q psy12647        281 PQELISHSSYHGGEERRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQC  360 (410)
Q Consensus       281 ~~~l~~H~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  360 (410)
                      +..|..|++.|.++ ++|.|+  .|++.|.....|..     .++|.|.+|++.|...+.|..|+ .+|.+++||.|++|
T Consensus         3 ~~~l~~H~~~h~~~-~~~~C~--~C~k~f~~~~~l~~-----~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGD-RSQKCS--KCGIIFIRRSTLSR-----RKTPMCEKCRKDSCQEAALNKDE-GNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCC-SEEECS--SSCCEEECCCCCCC-----SSSCCCHHHHHTCSCCCSSCCCS-SCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCC-CCeeCC--cccchhCCHHHhCc-----CCCCCCCCCChhhcCHHHHHHHH-HhhcCCCCCCCCCC
Confidence            34778888888876 788888  78877777766654     34455555555555555555554 44555555555444

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2.7e-12  Score=87.47  Aligned_cols=56  Identities=23%  Similarity=0.547  Sum_probs=49.9

Q ss_pred             CCcccccccCccCChhhHHHHHHhhc-CCCCCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLH-TGSLSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      ++|.|+.|++.|.....|..|++..| .+++||.|+.|++.|...+.|..|+++|++
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            67888999999999999999984448 689999999999999999999999999886

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.8e-12  Score=94.83  Aligned_cols=68  Identities=24%  Similarity=0.430  Sum_probs=60.9

Q ss_pred             CCCCcccccCcccccccccChhhHHHHHH-cC---C--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcc
Q psy12647        292 GGEERRYVCNHMQCTRRFHSASLLARHVS-TH---A--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPG  362 (410)
Q Consensus       292 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~~---~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  362 (410)
                      .| ++||.|.  .|++.|...+.|..|++ .|   .  ++|.|.+|++.|...+.|..|+.++|++++||.|+++..
T Consensus        14 ~g-ekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           14 KV-EGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CC-CSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CC-CcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            44 4999999  99999999999999997 47   3  789999999999999999999339999999999998654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=3.4e-12  Score=83.05  Aligned_cols=49  Identities=27%  Similarity=0.436  Sum_probs=44.5

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHH-hhcCCCCccCcccccccccc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDERPFPCPVCQRTFRRK  395 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~  395 (410)
                      ..|.+++||.|++|++.|.....|..|++ +|++++||+|.+|+++|+++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            45788999999999999999999999997 89999999999999999864

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.25  E-value=2.9e-12  Score=80.38  Aligned_cols=44  Identities=25%  Similarity=0.360  Sum_probs=42.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|++++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SG-SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CC-CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.4e-12  Score=79.89  Aligned_cols=44  Identities=23%  Similarity=0.332  Sum_probs=41.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...++|..|+++|++++||+|.+|
T Consensus         1 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GS-SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CC-CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CC-CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44 789999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.24  E-value=3.4e-12  Score=80.06  Aligned_cols=45  Identities=31%  Similarity=0.426  Sum_probs=42.3

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      +|+ .+|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSG-SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCC-CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.2e-12  Score=80.20  Aligned_cols=44  Identities=30%  Similarity=0.372  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|++++||.|++|++.|....+|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SG-SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             Cc-ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            66 789999999999999999999999999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.6e-13  Score=94.68  Aligned_cols=70  Identities=14%  Similarity=0.265  Sum_probs=63.6

Q ss_pred             ChhhHHHHHHcCC--CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        311 SASLLARHVSTHA--IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       311 ~~~~l~~H~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      +...|..|+++|.  ++|.|.+|++.|...+.|..        +++|.|+.|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3456778888887  78999999999999988765        7899999999999999999999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.1e-12  Score=80.26  Aligned_cols=44  Identities=30%  Similarity=0.371  Sum_probs=42.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|++++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SG-SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             Cc-CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66 789999999999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.9e-12  Score=79.78  Aligned_cols=44  Identities=25%  Similarity=0.355  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SG-SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CC-CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.23  E-value=3e-12  Score=80.29  Aligned_cols=44  Identities=25%  Similarity=0.339  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...++|..|+++|++++||+|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SG-SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             Cc-CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            66 789999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.3e-12  Score=79.59  Aligned_cols=45  Identities=29%  Similarity=0.347  Sum_probs=42.3

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      +|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSG-SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCC-CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=80.11  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CS-SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CC-CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.1e-12  Score=80.24  Aligned_cols=45  Identities=24%  Similarity=0.358  Sum_probs=42.3

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ ++|++++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSG-SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             Ccc-CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=79.93  Aligned_cols=44  Identities=27%  Similarity=0.398  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...+.|.+|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SG-SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CS-SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CC-cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.4e-12  Score=80.02  Aligned_cols=44  Identities=30%  Similarity=0.406  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SG-SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CC-CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=80.12  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=41.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SG-SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CC-cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=79.96  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|++++||.|++|++.|....+|..|+++|++++||+|.+|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SG-SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CC-SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CC-CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4e-12  Score=79.74  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SG-SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SC-CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CC-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.2e-12  Score=80.19  Aligned_cols=45  Identities=20%  Similarity=0.326  Sum_probs=42.5

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSG-SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCC-CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCC-CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=79.87  Aligned_cols=44  Identities=30%  Similarity=0.443  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|++++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SG-SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SS-CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CC-cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66 789999999999999999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=80.01  Aligned_cols=45  Identities=29%  Similarity=0.465  Sum_probs=42.3

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSG-SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCC-CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            365 789999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3e-12  Score=80.32  Aligned_cols=44  Identities=30%  Similarity=0.398  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SG-SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cc-cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4e-12  Score=79.73  Aligned_cols=44  Identities=27%  Similarity=0.394  Sum_probs=42.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SG-SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CC-CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Cc-cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.4e-12  Score=80.08  Aligned_cols=45  Identities=27%  Similarity=0.318  Sum_probs=42.4

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSG-SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             Ccc-cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4e-12  Score=79.74  Aligned_cols=45  Identities=27%  Similarity=0.379  Sum_probs=42.2

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSG-SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSS-SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCC-CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.6e-12  Score=79.42  Aligned_cols=45  Identities=24%  Similarity=0.356  Sum_probs=42.3

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|++++||.|++|++.|...++|..|+++|++++||+|++|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSG-SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSS-CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             Ccc-cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=79.97  Aligned_cols=45  Identities=29%  Similarity=0.374  Sum_probs=42.4

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|....+|..|+++|++++||+|++|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSG-SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCC-CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.22  E-value=4e-12  Score=79.75  Aligned_cols=45  Identities=29%  Similarity=0.412  Sum_probs=42.2

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSG-SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCc-cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.4e-12  Score=79.54  Aligned_cols=45  Identities=27%  Similarity=0.282  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      +|+ .+|.+++||.|++|++.|....+|..|+++|++++||+|++|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSG-SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCc-cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.22  E-value=9.4e-13  Score=88.45  Aligned_cols=58  Identities=17%  Similarity=0.337  Sum_probs=52.4

Q ss_pred             HHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCC
Q psy12647        342 TQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQ  403 (410)
Q Consensus       342 ~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  403 (410)
                      ..|+ .+|.+++||.|+.|++.|.....|.   ++|++++||+|.+|+++|....++..+..
T Consensus         3 ~~h~-~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~~~   60 (62)
T 1vd4_A            3 ETDE-RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPKKD   60 (62)
T ss_dssp             CCCS-SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCCCC
T ss_pred             hhHH-HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccccc
Confidence            4576 8899999999999999999988886   89999999999999999999999887754

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.5e-12  Score=79.49  Aligned_cols=45  Identities=29%  Similarity=0.366  Sum_probs=42.2

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSG-SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCC-CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            365 789999999999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.4e-12  Score=80.07  Aligned_cols=45  Identities=27%  Similarity=0.309  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      +|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSG-SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCc-CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.6e-12  Score=79.96  Aligned_cols=44  Identities=27%  Similarity=0.375  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SG-SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CC-CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.1e-12  Score=79.69  Aligned_cols=44  Identities=27%  Similarity=0.402  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SG-SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             Cc-ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.5e-12  Score=79.47  Aligned_cols=44  Identities=25%  Similarity=0.301  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SG-SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             Cc-ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.3e-12  Score=80.13  Aligned_cols=44  Identities=27%  Similarity=0.385  Sum_probs=41.7

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SG-SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cc-cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.6e-12  Score=79.92  Aligned_cols=44  Identities=27%  Similarity=0.360  Sum_probs=41.7

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SG-SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CC-cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.7e-12  Score=79.41  Aligned_cols=44  Identities=16%  Similarity=0.172  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SG-SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CS-CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cc-cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 889999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.21  E-value=3.4e-12  Score=80.04  Aligned_cols=45  Identities=29%  Similarity=0.370  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSG-SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccc-cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            365 789999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.8e-12  Score=79.34  Aligned_cols=44  Identities=23%  Similarity=0.434  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SG-SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CS-SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CC-CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=80.03  Aligned_cols=44  Identities=27%  Similarity=0.387  Sum_probs=42.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cC-cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.2e-12  Score=79.62  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=41.9

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         3 h~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SG-SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CS-CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CC-CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.21  E-value=4.3e-12  Score=79.58  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SG-SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SC-CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CC-CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=79.47  Aligned_cols=45  Identities=24%  Similarity=0.426  Sum_probs=42.3

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|++++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSG-SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CST-TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             Ccc-cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.1e-12  Score=79.23  Aligned_cols=44  Identities=23%  Similarity=0.324  Sum_probs=41.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SG-SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CC-CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CC-CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55 789999999999999999999999999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.20  E-value=5.8e-12  Score=78.98  Aligned_cols=44  Identities=30%  Similarity=0.412  Sum_probs=41.7

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SG-SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SC-CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CC-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            54 789999999999999999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.5e-12  Score=79.49  Aligned_cols=44  Identities=25%  Similarity=0.273  Sum_probs=41.7

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|..|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SG-SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cc-ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.1e-12  Score=79.69  Aligned_cols=44  Identities=30%  Similarity=0.466  Sum_probs=41.7

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 H~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SG-SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CC-CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CC-cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.4e-12  Score=80.05  Aligned_cols=45  Identities=27%  Similarity=0.403  Sum_probs=42.2

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|++++||.|++|++.|...+.|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSG-SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCC-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 789999999999999999999999999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.4e-11  Score=76.75  Aligned_cols=43  Identities=23%  Similarity=0.380  Sum_probs=41.2

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcccc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQ  389 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  389 (410)
                      .+|++++||.|++|++.|...+.|..|+++|+++++|.|++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5789999999999999999999999999999999999999996

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.1e-12  Score=78.45  Aligned_cols=44  Identities=30%  Similarity=0.409  Sum_probs=41.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHH-hhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  388 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|++ +|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SG-SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cc-cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            55 78999999999999999999999999999 9999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=6.5e-12  Score=87.50  Aligned_cols=54  Identities=35%  Similarity=0.757  Sum_probs=45.4

Q ss_pred             CCcccc--cccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        324 IQYTCH--MCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       324 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      ++|.|+  .|++.|.....|..|+ .+|.+++||.|++|++.|.....|..|+++|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHH-HhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            467775  4888888888888887 78888899999999999999999999988874

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.8e-12  Score=78.36  Aligned_cols=45  Identities=27%  Similarity=0.380  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      .|+ .+|.+++||.|++|++.|...++|..|+++|++++||+|.+|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSG-SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCC-CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            365 789999999999999999999999999999999999999875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.2e-11  Score=77.50  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=41.5

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SG-SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CC-CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            65 789999999999999999999999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.4e-11  Score=83.86  Aligned_cols=56  Identities=18%  Similarity=0.320  Sum_probs=35.7

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccC-cCcccccCcHhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCT-QCPGKFYSAYELRQHVRQHTDERP  382 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  382 (410)
                      ++|.|..|++.|. .+.|..|+ .+ .+++||.|+ .|++.|...+.|..|+++|...++
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~-~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQ-YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHH-HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCeeccccCCccC-HHHHHHHH-HH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3566666666666 66666665 44 666666666 666666666666666666655443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.7e-11  Score=86.58  Aligned_cols=60  Identities=27%  Similarity=0.525  Sum_probs=46.9

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCC---CCCcccCcCcccccCcHhHHHHH-HhhcCCCCcc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTG---SLSYPCTQCPGKFYSAYELRQHV-RQHTDERPFP  384 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~---~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~  384 (410)
                      ++|.|.+|++.|.....|..|+ .+|.+   +++|.|++|++.|.....|..|+ +.|.++++..
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            6 SGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             cCeECCCCCCeeCCHHHHHHHH-HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            5788888888888888888887 66764   78888888888888888888888 4566666544

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=8.4e-12  Score=84.99  Aligned_cols=55  Identities=22%  Similarity=0.403  Sum_probs=51.5

Q ss_pred             cCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc-cccccccccccCccCCCCC
Q psy12647        349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP-VCQRTFRRKVCTTPSPQPQ  405 (410)
Q Consensus       349 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~  405 (410)
                      .-+++||.|+.|++.|. .+.|..|+++ ++++||+|. .|+++|..++.|..|++.+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            45678999999999999 9999999999 999999999 9999999999999999764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.2e-11  Score=76.26  Aligned_cols=42  Identities=31%  Similarity=0.531  Sum_probs=40.5

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999988

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=2.2e-11  Score=76.99  Aligned_cols=44  Identities=20%  Similarity=0.406  Sum_probs=40.1

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR  390 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  390 (410)
                      ..|.++++|.|++|++.|.....|..|+++|++++||+|.+|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            35778899999999999999999999999999999999999985

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.4e-11  Score=75.39  Aligned_cols=42  Identities=31%  Similarity=0.434  Sum_probs=40.3

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      ++|.+++||.|++|++.|.....|..|+++|++++||+|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=2.6e-11  Score=74.26  Aligned_cols=42  Identities=24%  Similarity=0.369  Sum_probs=39.2

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ ++|++++||.|++|++.|...+.|..|+++|++++||+|.
T Consensus         1 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GS-SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CC-SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CC-CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            44 7899999999999999999999999999999999999994

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.11  E-value=2.7e-11  Score=75.87  Aligned_cols=43  Identities=28%  Similarity=0.434  Sum_probs=40.5

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SG-SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CC-CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            66 78999999999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.7e-11  Score=75.85  Aligned_cols=43  Identities=30%  Similarity=0.422  Sum_probs=40.5

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SG-SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SC-CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             Cc-cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            65 88999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.1e-11  Score=75.54  Aligned_cols=43  Identities=28%  Similarity=0.387  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CC-cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4e-11  Score=73.40  Aligned_cols=42  Identities=24%  Similarity=0.365  Sum_probs=39.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|.
T Consensus         1 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GS-SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CC-SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CC-cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44 7899999999999999999999999999999999999984

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.5e-11  Score=75.30  Aligned_cols=44  Identities=30%  Similarity=0.441  Sum_probs=40.8

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      .|+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSG-SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCC-CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 78999999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.2e-11  Score=74.95  Aligned_cols=44  Identities=30%  Similarity=0.439  Sum_probs=40.6

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      .|+ .+|.+++||.|++|++.|....+|..|+++|++++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSG-SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccc-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            365 78999999999999999999999999999999999999974

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.09  E-value=2.8e-11  Score=83.97  Aligned_cols=57  Identities=28%  Similarity=0.596  Sum_probs=42.3

Q ss_pred             hcCCCCCcccCc--CcccccCcHhHHHHHHhhcCCCCccCcc--ccccccccccCccCCCC
Q psy12647        348 LHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDERPFPCPV--CQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       348 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  404 (410)
                      .+...++|.|+.  |++.|.....|..|+++|++++||+|.+  |++.|..+..|..|++.
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            345567777777  7777777777777777777777777754  77777777777777754

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.6e-11  Score=75.27  Aligned_cols=44  Identities=30%  Similarity=0.468  Sum_probs=40.6

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSG-SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             Ccc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            365 78999999999999999999999999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.6e-11  Score=75.23  Aligned_cols=43  Identities=28%  Similarity=0.398  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|.+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CC-cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999964

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.5e-11  Score=74.82  Aligned_cols=43  Identities=30%  Similarity=0.421  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SG-SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CC-CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CC-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 78999999999999999999999999999999999999963

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.5e-11  Score=75.32  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=40.4

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SG-SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CC-CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             cc-CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3e-11  Score=75.61  Aligned_cols=43  Identities=30%  Similarity=0.416  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SG-SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cc-cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999964

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.8e-11  Score=75.16  Aligned_cols=43  Identities=28%  Similarity=0.370  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SG-SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CC-CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CC-CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999964

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.6e-11  Score=74.76  Aligned_cols=43  Identities=26%  Similarity=0.401  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         3 h~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SG-SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CC-CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 78999999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.8e-11  Score=75.15  Aligned_cols=44  Identities=25%  Similarity=0.443  Sum_probs=40.6

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      .|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSG-SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             Ccc-cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            366 78999999999999999999999999999999999999964

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.7e-11  Score=75.19  Aligned_cols=43  Identities=30%  Similarity=0.483  Sum_probs=40.5

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SG-SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SS-SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CC-cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            66 78999999999999999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.6e-11  Score=75.27  Aligned_cols=43  Identities=30%  Similarity=0.397  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SG-SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CS-SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CC-CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            55 78999999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.5e-11  Score=74.82  Aligned_cols=43  Identities=28%  Similarity=0.432  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SG-SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             Cc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999964

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.2e-11  Score=74.94  Aligned_cols=43  Identities=28%  Similarity=0.427  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SG-SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CC-CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CC-cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4e-11  Score=75.02  Aligned_cols=43  Identities=28%  Similarity=0.449  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|...++|..|+++|++++||+|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SG-SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CC-CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.3e-11  Score=74.87  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=40.8

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      +|+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSG-SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSC-CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             Ccc-ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 78999999999999999999999999999999999999964

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.8e-11  Score=74.65  Aligned_cols=44  Identities=27%  Similarity=0.360  Sum_probs=40.7

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      +|+ ++|.+++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSG-SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCC-CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             Ccc-cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            366 78999999999999999999999999999999999999963

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4e-11  Score=75.01  Aligned_cols=43  Identities=30%  Similarity=0.456  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SG-SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CS-CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CC-CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            65 78999999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=5.6e-11  Score=73.56  Aligned_cols=42  Identities=21%  Similarity=0.307  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SG-SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CS-CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             Cc-cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            66 7899999999999999999999999999999999999984

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5e-11  Score=74.59  Aligned_cols=43  Identities=28%  Similarity=0.403  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SG-SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cc-cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            66 78999999999999999999999999999999999999963

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.4e-11  Score=74.06  Aligned_cols=42  Identities=21%  Similarity=0.326  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||+|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SG-SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SC-CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             Cc-cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            66 7899999999999999999999999999999999999994

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.06  E-value=2.5e-11  Score=78.91  Aligned_cols=52  Identities=12%  Similarity=0.113  Sum_probs=48.1

Q ss_pred             cCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCcc
Q psy12647        332 GHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFP  384 (410)
Q Consensus       332 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  384 (410)
                      ++.|.....|..|+ .+|.+++||.|++|++.|...+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPR-SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCH-HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHH-HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            46788888999997 89999999999999999999999999999999999874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.5e-11  Score=73.58  Aligned_cols=42  Identities=29%  Similarity=0.408  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ .+|.+++||.|++|++.|...++|..|+++|++++||+|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SG-SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CS-SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             Cc-cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            65 7899999999999999999999999999999999999995

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.5e-11  Score=73.61  Aligned_cols=42  Identities=31%  Similarity=0.351  Sum_probs=39.4

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SG-SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SC-CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CC-cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            65 7899999999999999999999999999999999999985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.9e-11  Score=74.63  Aligned_cols=43  Identities=33%  Similarity=0.452  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SG-SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             Cc-cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999963

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4.5e-11  Score=73.16  Aligned_cols=41  Identities=29%  Similarity=0.532  Sum_probs=38.5

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  385 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  385 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SS-GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CC-SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CC-cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            44 789999999999999999999999999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.05  E-value=5.9e-11  Score=72.62  Aligned_cols=41  Identities=24%  Similarity=0.346  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  385 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  385 (410)
                      |+ .+|.+++||.|++|++.|...++|..|+++|++++||+|
T Consensus         2 H~-~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SS-GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CC-SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CC-ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            44 789999999999999999999999999999999999998

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.05  E-value=3.1e-10  Score=83.32  Aligned_cols=62  Identities=26%  Similarity=0.458  Sum_probs=51.4

Q ss_pred             CcccccccccccChhHHHHHHhhhcCCCCc--------cccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLARLHTGSLS--------YPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      .+.|..|++.|.+...|..|++..|.++++        |.|++|++.|.....|..|+++|.+++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            467888888888888888887444887776        88999999999999999999999888888886

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.05  E-value=1.5e-10  Score=71.21  Aligned_cols=41  Identities=20%  Similarity=0.413  Sum_probs=38.6

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      ++|++++||.|+.|++.|...+.|..|+++|++++||+|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57899999999999999999999999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=73.47  Aligned_cols=41  Identities=29%  Similarity=0.427  Sum_probs=38.7

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  385 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  385 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SS-GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CC-CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             Cc-cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55 789999999999999999999999999999999999988

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.1e-11  Score=72.59  Aligned_cols=42  Identities=17%  Similarity=0.170  Sum_probs=39.3

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|.
T Consensus         3 h~-~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SG-SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CS-CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CC-CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            44 7899999999999999999999999999999999999994

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=73.17  Aligned_cols=41  Identities=29%  Similarity=0.483  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  385 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  385 (410)
                      |+ .+|++++||.|+.|++.|...+.|..|+++|++++||+|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SS-GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CC-CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CC-cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44 789999999999999999999999999999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.3e-11  Score=74.11  Aligned_cols=42  Identities=21%  Similarity=0.358  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SG-SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CC-SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CC-cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            66 7899999999999999999999999999999999999996

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.2e-11  Score=73.84  Aligned_cols=43  Identities=30%  Similarity=0.431  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 h~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SG-SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CC-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 78999999999999999999999999999999999999963

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=6.4e-11  Score=74.08  Aligned_cols=43  Identities=23%  Similarity=0.317  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcC-CCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTD-ERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  387 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++ ++||+|.+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SG-SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CC-CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             Cc-cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 789999999999999999999999999999999 99999964

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=6.4e-11  Score=73.28  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=39.4

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SG-SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CC-SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cc-cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            65 7899999999999999999999999999999999999994

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.5e-11  Score=73.75  Aligned_cols=43  Identities=28%  Similarity=0.383  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SG-SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cc-cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            65 78999999999999999999999999999999999999963

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.1e-10  Score=71.70  Aligned_cols=41  Identities=29%  Similarity=0.403  Sum_probs=38.8

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      ++|.+++||.|++|++.|....+|..|+++|++++||+|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            67999999999999999999999999999999999999964

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.7e-11  Score=73.70  Aligned_cols=42  Identities=24%  Similarity=0.382  Sum_probs=39.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ .+|.+++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SG-SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CC-CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cc-cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            65 7899999999999999999999999999999999999995

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.6e-10  Score=70.20  Aligned_cols=39  Identities=28%  Similarity=0.437  Sum_probs=37.3

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  385 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  385 (410)
                      ++|.+++||.|++|++.|.....|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            679999999999999999999999999999999999998

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=71.75  Aligned_cols=41  Identities=32%  Similarity=0.485  Sum_probs=38.7

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      ++|.+++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            67999999999999999999999999999999999999974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8e-11  Score=72.84  Aligned_cols=42  Identities=26%  Similarity=0.386  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |+ .+|.+++||.|++|++.|...+.|..|+++|++++||+|.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SG-SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CC-CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CC-cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            65 7899999999999999999999999999999999999984

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.98  E-value=2e-10  Score=79.60  Aligned_cols=53  Identities=32%  Similarity=0.656  Sum_probs=45.8

Q ss_pred             CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccCc--CcccccCcHhHHHHHHhh
Q psy12647        324 IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       324 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  377 (410)
                      ++|.|.+  |++.|.....|..|+ .+|.+++||.|++  |++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHH-HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHH-HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            5678877  888888888999998 8899999999965  999999999999998775

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.5e-10  Score=72.03  Aligned_cols=42  Identities=29%  Similarity=0.460  Sum_probs=40.0

Q ss_pred             hhcCCCCCcccC--cCcccccCcHhHHHHHHhhcCCCCccCccc
Q psy12647        347 RLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVC  388 (410)
Q Consensus       347 ~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  388 (410)
                      ++|.+++||.|.  .|++.|.....|..|+++|++++||+|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999998  899999999999999999999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=70.84  Aligned_cols=41  Identities=22%  Similarity=0.280  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  385 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  385 (410)
                      |+ ++|.+++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SG-SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CC-cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            65 889999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=6.3e-10  Score=72.12  Aligned_cols=43  Identities=26%  Similarity=0.467  Sum_probs=38.0

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYS  366 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~  366 (410)
                      ++|.|.+|++.|.....|..|++.+|.+++||.|++|++.|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            6788899999999999999998458999999999999999875

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.82  E-value=2.6e-09  Score=66.58  Aligned_cols=44  Identities=32%  Similarity=0.434  Sum_probs=40.1

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SG-SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CC-CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 688999999999999999999999999999999999999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.9e-09  Score=66.44  Aligned_cols=42  Identities=24%  Similarity=0.375  Sum_probs=38.6

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            678899999999999999999999999999999999999887

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.82  E-value=2.3e-09  Score=64.12  Aligned_cols=38  Identities=29%  Similarity=0.384  Sum_probs=34.0

Q ss_pred             cCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCc
Q psy12647        349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  386 (410)
Q Consensus       349 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  386 (410)
                      |.+++||.|++|++.|...+.|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            57889999999999999999999999999999998763

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.5e-09  Score=66.64  Aligned_cols=44  Identities=30%  Similarity=0.372  Sum_probs=39.5

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SG-SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             Cc-ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            55 678899999999999999999999999999999999999887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.7e-09  Score=66.45  Aligned_cols=44  Identities=25%  Similarity=0.355  Sum_probs=39.5

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SG-SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CC-CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678899999999999999999999999999999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.3e-09  Score=66.79  Aligned_cols=44  Identities=30%  Similarity=0.371  Sum_probs=39.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SG-SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             Cc-CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678899999999999999999999999999999999999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.9e-09  Score=66.35  Aligned_cols=44  Identities=30%  Similarity=0.354  Sum_probs=39.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SG-SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CC-CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CC-CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 678899999999999999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.3e-09  Score=66.79  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=38.2

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SG-SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CC-cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            54 678888899999999999999999999988988899998876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.9e-09  Score=66.32  Aligned_cols=45  Identities=24%  Similarity=0.356  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        212 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       212 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      +|+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSG-SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSS-CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             Ccc-cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355 678999999999999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=66.76  Aligned_cols=44  Identities=27%  Similarity=0.402  Sum_probs=40.0

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SG-SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             Cc-ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            55 678999999999999999999999999999999999999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.2e-09  Score=66.87  Aligned_cols=44  Identities=25%  Similarity=0.364  Sum_probs=39.2

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SG-SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CC-CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cc-CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            55 678899999999999999999999999999999999999877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.3e-09  Score=66.82  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=40.2

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SG-SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CC-CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 678999999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2e-09  Score=67.10  Aligned_cols=44  Identities=27%  Similarity=0.385  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SG-SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cc-cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678888999999999999999999999999999999998876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.5e-09  Score=66.63  Aligned_cols=44  Identities=27%  Similarity=0.324  Sum_probs=40.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SG-SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cc-cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 689999999999999999999999999999999999999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.5e-09  Score=66.60  Aligned_cols=44  Identities=30%  Similarity=0.474  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SG-SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CC-CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678899999999999999999999999999999999999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.7e-09  Score=66.45  Aligned_cols=44  Identities=30%  Similarity=0.406  Sum_probs=38.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SG-SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CC-CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45 678888999999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.79  E-value=2.4e-09  Score=66.73  Aligned_cols=44  Identities=25%  Similarity=0.360  Sum_probs=38.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SG-SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CC-CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44 678889999999999999999999999999999999999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.79  E-value=2.5e-09  Score=66.66  Aligned_cols=44  Identities=30%  Similarity=0.420  Sum_probs=39.2

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SG-SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SC-SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             Cc-cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 678889999999999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.7e-09  Score=66.46  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SG-SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CC-SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CC-CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44 678888999999999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.6e-09  Score=66.54  Aligned_cols=44  Identities=27%  Similarity=0.386  Sum_probs=39.2

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SG-SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SS-SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CC-CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678889999999999999999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.1e-09  Score=66.20  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SG-SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SC-CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CC-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44 678899999999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.4e-09  Score=66.69  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=40.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SG-SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CC-CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CC-CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55 689999999999999999999999999999999999999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.3e-09  Score=66.78  Aligned_cols=44  Identities=30%  Similarity=0.398  Sum_probs=38.8

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SG-SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cc-cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            55 678889999999999999999999999999999999999877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=8.7e-10  Score=68.78  Aligned_cols=36  Identities=31%  Similarity=0.553  Sum_probs=30.5

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQC  360 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  360 (410)
                      ++|.|++|++.|...+.|..|+ .+|.+++||.|++|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5677888888888888888887 88999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.5e-09  Score=66.62  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=38.0

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CS-SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CC-CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678888889999999999999999999988888889988876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.9e-09  Score=66.29  Aligned_cols=44  Identities=27%  Similarity=0.287  Sum_probs=38.8

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SG-SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CC-CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             Cc-cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678889999999999999999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.1e-09  Score=66.20  Aligned_cols=44  Identities=27%  Similarity=0.398  Sum_probs=38.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SG-SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CS-SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CC-cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44 678889999999999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.8e-09  Score=66.39  Aligned_cols=44  Identities=30%  Similarity=0.443  Sum_probs=38.8

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SG-SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SS-CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CC-cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 678889999999999999999999999999999999999877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.9e-09  Score=66.30  Aligned_cols=44  Identities=30%  Similarity=0.373  Sum_probs=38.8

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SG-SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CC-CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 678888999999999999999999999999999999999877

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.78  E-value=2.7e-09  Score=66.50  Aligned_cols=44  Identities=25%  Similarity=0.339  Sum_probs=38.0

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SG-SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             Cc-CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            55 678888889999999999999999999888888889988876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.1e-09  Score=66.22  Aligned_cols=44  Identities=27%  Similarity=0.394  Sum_probs=39.5

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SG-SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CC-CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Cc-cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678899999999999999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.4e-09  Score=66.73  Aligned_cols=44  Identities=27%  Similarity=0.314  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SG-SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             Cc-CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678888899999999999999999999988988899998876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.5e-09  Score=66.62  Aligned_cols=44  Identities=27%  Similarity=0.360  Sum_probs=38.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SG-SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CC-cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678888999999999999999999999999999999999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.78  E-value=2.4e-09  Score=66.70  Aligned_cols=44  Identities=30%  Similarity=0.377  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SG-SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CC-CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cc-cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678888899999999999999999999999988999998876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.8e-09  Score=66.39  Aligned_cols=44  Identities=27%  Similarity=0.375  Sum_probs=38.1

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SG-SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CC-CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44 678888899999999999999999999999988899998876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.6e-09  Score=65.88  Aligned_cols=44  Identities=16%  Similarity=0.172  Sum_probs=39.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SG-SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CS-CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cc-cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44 678899999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.7e-09  Score=65.85  Aligned_cols=42  Identities=24%  Similarity=0.490  Sum_probs=38.1

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            678889999999999999999999999999999999999877

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.3e-10  Score=79.67  Aligned_cols=62  Identities=16%  Similarity=0.209  Sum_probs=50.4

Q ss_pred             hhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCC
Q psy12647        339 RRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       339 ~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  404 (410)
                      ..|..|+ .+|.+++|+.|+.|++.|. .+.|..|+ .|.+++||.|..|++.|. ..+|..|++.
T Consensus         3 ~~L~~H~-~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            3 SGSSGHE-ETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCSCCC-CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             hHHHhhC-cccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            4566776 7788888899999988884 88888888 888888899999988876 5788888754

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.76  E-value=3.1e-09  Score=66.21  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SG-SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SC-CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CC-CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678888899999999999999999999988988899998876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.1e-09  Score=66.20  Aligned_cols=44  Identities=25%  Similarity=0.434  Sum_probs=38.2

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SG-SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             ST-TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cc-cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678888899999999999999999999988888889988876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.3e-09  Score=66.07  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=39.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 h~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SG-SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CS-CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CC-CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44 678899999999999999999999999999999999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.4e-09  Score=65.99  Aligned_cols=44  Identities=25%  Similarity=0.301  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SG-SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             Cc-ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678888999999999999999999999999999999998876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.3e-09  Score=66.06  Aligned_cols=44  Identities=25%  Similarity=0.273  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SG-SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cc-ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 678888899999999999999999999999999999998876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.8e-09  Score=66.40  Aligned_cols=44  Identities=30%  Similarity=0.466  Sum_probs=37.8

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SG-SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CC-CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CC-cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44 678888889999999999999999999888888888988876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.74  E-value=4.7e-09  Score=65.34  Aligned_cols=42  Identities=31%  Similarity=0.468  Sum_probs=37.9

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            678889999999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4.1e-09  Score=65.62  Aligned_cols=42  Identities=24%  Similarity=0.376  Sum_probs=38.8

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            678899999999999999999999999999999999999887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=4.7e-09  Score=66.04  Aligned_cols=38  Identities=29%  Similarity=0.603  Sum_probs=33.9

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPG  362 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  362 (410)
                      ++|.|.+|++.|.....|..|+ .+|.+++||.|++|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            6788889999999999999997 8899999999999985

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.8e-09  Score=66.42  Aligned_cols=44  Identities=27%  Similarity=0.387  Sum_probs=38.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cC-cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 678889999999999999999999999999999999999876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=9.8e-09  Score=67.86  Aligned_cols=40  Identities=20%  Similarity=0.263  Sum_probs=33.8

Q ss_pred             hcCCCCCcccCc--CcccccCcHhHHHHH-HhhcCCCCccCcc
Q psy12647        348 LHTGSLSYPCTQ--CPGKFYSAYELRQHV-RQHTDERPFPCPV  387 (410)
Q Consensus       348 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  387 (410)
                      ..++++||.|+.  |+++|...++|..|+ ++|++++||-|.+
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            357889999965  999999999999997 6899999998854

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5.8e-09  Score=65.25  Aligned_cols=44  Identities=30%  Similarity=0.409  Sum_probs=37.5

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHH-HhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++ .|.+++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SG-SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cc-cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            44 67888888999999999988888988988 8888888888876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4.9e-09  Score=65.27  Aligned_cols=44  Identities=27%  Similarity=0.387  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SG-SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CC-CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 678889999999999999999999999999999999998864

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.71  E-value=8.7e-09  Score=59.81  Aligned_cols=35  Identities=34%  Similarity=0.592  Sum_probs=32.3

Q ss_pred             hcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCC
Q psy12647        348 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  382 (410)
Q Consensus       348 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  382 (410)
                      +|.+++||.|++|++.|...++|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999999999875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=9.7e-10  Score=78.93  Aligned_cols=55  Identities=20%  Similarity=0.283  Sum_probs=47.6

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQ  405 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  405 (410)
                      .+|.+++||.|++|++.|.....|..|+++|++++||+|..|.    ....|..|.+..
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~   72 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYA   72 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccc
Confidence            5689999999999999999999999999999999999997654    566677776654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=8e-09  Score=60.86  Aligned_cols=36  Identities=19%  Similarity=0.436  Sum_probs=33.8

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  382 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  382 (410)
                      ++|.+++||.|++|++.|....+|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.6e-09  Score=64.39  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=39.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SG-SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CC-CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44 678899999999999999999999999999999999999874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.1e-08  Score=63.26  Aligned_cols=43  Identities=23%  Similarity=0.380  Sum_probs=38.5

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccch
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQ  258 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~  258 (410)
                      ..|.++++|.|++|++.|.....|..|++.|.++++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4688889999999999999999999999999999999999885

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.68  E-value=1.2e-08  Score=59.22  Aligned_cols=35  Identities=23%  Similarity=0.461  Sum_probs=32.1

Q ss_pred             hcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCC
Q psy12647        348 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  382 (410)
Q Consensus       348 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  382 (410)
                      +|.+++||.|++|++.|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999998875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.4e-08  Score=63.15  Aligned_cols=42  Identities=31%  Similarity=0.531  Sum_probs=38.7

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            678899999999999999999999999999999999999887

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.65  E-value=1.9e-08  Score=57.52  Aligned_cols=32  Identities=22%  Similarity=0.524  Sum_probs=26.9

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCCCcc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDERPFP  384 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  384 (410)
                      +||.|++|++.|...+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47888888888888888888888888888875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.65  E-value=1.3e-08  Score=61.94  Aligned_cols=40  Identities=25%  Similarity=0.416  Sum_probs=36.2

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            6788999999999999999999999999999999999885

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.4e-08  Score=63.10  Aligned_cols=43  Identities=30%  Similarity=0.422  Sum_probs=38.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SG-SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SC-CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             Cc-cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            55 68899999999999999999999999999999999999874

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.9e-08  Score=61.08  Aligned_cols=40  Identities=25%  Similarity=0.412  Sum_probs=36.0

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|.
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6788999999999999999999999999999999999884

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.64  E-value=1.4e-08  Score=63.08  Aligned_cols=43  Identities=28%  Similarity=0.434  Sum_probs=38.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SG-SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CC-CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 68889999999999999999999999999999999999874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.6e-08  Score=62.89  Aligned_cols=43  Identities=30%  Similarity=0.450  Sum_probs=38.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SG-SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CC-CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 67899999999999999999999999999999999999875

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.7e-08  Score=62.78  Aligned_cols=42  Identities=31%  Similarity=0.434  Sum_probs=37.0

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            578888899999999999999999999999988999998876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.64  E-value=4.3e-09  Score=70.29  Aligned_cols=54  Identities=15%  Similarity=0.380  Sum_probs=46.6

Q ss_pred             HHHHhhhhcCCCCceecccccccccCchhHHHHHHHhhhcCCCCcccCCcCcccccCcccc
Q psy12647         75 LKDHVNKIHLHPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRDGL  135 (410)
Q Consensus        75 l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l  135 (410)
                      |..| ++.|.++++|.|+.|++.|.....|.   ..   +.++++|.|+.|++.|.....+
T Consensus         2 L~~h-~~~H~~~k~~~C~~C~k~F~~~~~l~---~~---H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETD-ERDSTNRASFKCPVCSSTFTDLEANQ---LF---DPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCC-SSSCCSSSEEECSSSCCEEEHHHHHH---HE---ETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhH-HHHcCCCCCccCCCCCchhccHHHhH---hh---cCCCCCEECCCCCCccccCccc
Confidence            4567 78899999999999999999887775   44   7888999999999999988774

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.64  E-value=1.3e-08  Score=59.93  Aligned_cols=36  Identities=25%  Similarity=0.414  Sum_probs=32.2

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      |+ ++|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         2 H~-~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 ST-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CS-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CC-CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            55 7899999999999999999999999999999874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.6e-08  Score=62.92  Aligned_cols=43  Identities=28%  Similarity=0.387  Sum_probs=37.2

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CC-cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            54 67888899999999999999999999999999999998874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.6e-08  Score=62.79  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=38.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SG-SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CC-CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             cc-CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 67889999999999999999999999999999999999874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=2.2e-08  Score=62.24  Aligned_cols=43  Identities=26%  Similarity=0.401  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 h~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SG-SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CC-CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 67899999999999999999999999999999999999874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=2.1e-08  Score=62.32  Aligned_cols=43  Identities=30%  Similarity=0.421  Sum_probs=37.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SG-SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CC-CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CC-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            45 67889999999999999999999999999999999999864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.4e-08  Score=63.16  Aligned_cols=43  Identities=30%  Similarity=0.416  Sum_probs=37.8

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SG-SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cc-cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 67888999999999999999999999999999999998874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.7e-08  Score=62.69  Aligned_cols=43  Identities=28%  Similarity=0.398  Sum_probs=37.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CC-cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            55 67888999999999999999999999999999999998864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.7e-08  Score=62.77  Aligned_cols=43  Identities=30%  Similarity=0.483  Sum_probs=38.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SG-SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SS-SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CC-cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            55 68899999999999999999999999999999999999975

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=2e-08  Score=62.38  Aligned_cols=43  Identities=30%  Similarity=0.448  Sum_probs=37.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SG-SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CC-CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cc-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 67888999999999999999999999999999999998874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.8e-08  Score=62.59  Aligned_cols=43  Identities=28%  Similarity=0.370  Sum_probs=36.8

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SG-SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CC-CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CC-CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 67888888999999999999999999998898888888864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.9e-08  Score=62.49  Aligned_cols=43  Identities=26%  Similarity=0.452  Sum_probs=37.5

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SG-SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cc-cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            55 67888999999999999999999999999999999998864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.8e-08  Score=62.59  Aligned_cols=43  Identities=30%  Similarity=0.477  Sum_probs=37.0

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SG-SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 67888889999999999999999999999998889988864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.9e-08  Score=62.53  Aligned_cols=43  Identities=28%  Similarity=0.427  Sum_probs=37.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SG-SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CC-CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CC-cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            55 67888999999999999999999999999999999998864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=2e-08  Score=62.42  Aligned_cols=43  Identities=28%  Similarity=0.432  Sum_probs=37.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SG-SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             Cc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 67888899999999999999999999999999999998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=2e-08  Score=62.37  Aligned_cols=43  Identities=28%  Similarity=0.403  Sum_probs=37.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SG-SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cc-cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 67888999999999999999999999999999999998864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.8e-08  Score=62.57  Aligned_cols=43  Identities=28%  Similarity=0.449  Sum_probs=37.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SG-SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CC-CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 67888999999999999999999999999999999998874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.8e-08  Score=62.58  Aligned_cols=41  Identities=32%  Similarity=0.454  Sum_probs=35.5

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            67888888999999999999889999988888888888864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.6e-08  Score=61.18  Aligned_cols=42  Identities=29%  Similarity=0.408  Sum_probs=37.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SG-SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CS-SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             Cc-cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            55 6789999999999999999999999999999999999885

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.1e-08  Score=62.28  Aligned_cols=43  Identities=30%  Similarity=0.388  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SG-SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SC-CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cc-ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 67889999999999999999999999999999999999864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2.4e-08  Score=62.06  Aligned_cols=43  Identities=28%  Similarity=0.367  Sum_probs=38.1

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            3 SG-SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CC-CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             cc-cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            55 67889999999999999999999999999999999998863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.9e-08  Score=62.47  Aligned_cols=43  Identities=30%  Similarity=0.456  Sum_probs=36.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SG-SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CS-CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CC-CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            55 67888888999999999999999999988888888888864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=2.9e-08  Score=58.76  Aligned_cols=36  Identities=22%  Similarity=0.407  Sum_probs=33.0

Q ss_pred             cCCCCCcccC--cCcccccCcHhHHHHHHhhcCCCCcc
Q psy12647        349 HTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFP  384 (410)
Q Consensus       349 H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  384 (410)
                      |++++||.|+  .|++.|...++|.+|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6789999999  59999999999999999999999874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2.1e-08  Score=62.33  Aligned_cols=43  Identities=33%  Similarity=0.452  Sum_probs=37.3

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SG-SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             Cc-cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 67888899999999999999999999999999999998864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3.5e-08  Score=58.07  Aligned_cols=33  Identities=21%  Similarity=0.414  Sum_probs=30.4

Q ss_pred             hcCCCCCcccCc--CcccccCcHhHHHHHHhhcCC
Q psy12647        348 LHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       348 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      .+.+++||.|++  |+++|..++.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            478899999986  999999999999999999986

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.7e-08  Score=61.12  Aligned_cols=42  Identities=31%  Similarity=0.351  Sum_probs=36.6

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SG-SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SC-CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CC-cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            55 6788889999999999999999999999999999998884

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2.5e-08  Score=61.29  Aligned_cols=42  Identities=21%  Similarity=0.307  Sum_probs=37.5

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SG-SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CS-CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             Cc-cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            55 6788999999999999999999999999999999999884

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.57  E-value=6.3e-08  Score=59.10  Aligned_cols=41  Identities=20%  Similarity=0.413  Sum_probs=36.8

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      +.|.++++|.|+.|++.|.....|..|++.|.+++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46888999999999999999999999999999999999874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.1e-08  Score=61.63  Aligned_cols=42  Identities=21%  Similarity=0.326  Sum_probs=36.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SG-SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SC-CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             Cc-cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            55 6788889999999999999999999999999888888884

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.4e-08  Score=62.02  Aligned_cols=43  Identities=21%  Similarity=0.342  Sum_probs=38.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SG-SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CC-SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CC-cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 68999999999999999999999999999999999999874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.7e-08  Score=57.91  Aligned_cols=35  Identities=17%  Similarity=0.369  Sum_probs=32.3

Q ss_pred             hhcCCCCCcccCcCcccccCc-HhHHHHHHhhcCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSA-YELRQHVRQHTDER  381 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  381 (410)
                      ++|.+++||.|+.|++.|... +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            578999999999999999999 99999999999864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.56  E-value=3.6e-08  Score=59.83  Aligned_cols=39  Identities=26%  Similarity=0.383  Sum_probs=35.8

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  254 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  254 (410)
                      .+|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            678899999999999999999999999999999999887

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.55  E-value=1.5e-08  Score=65.45  Aligned_cols=52  Identities=12%  Similarity=0.113  Sum_probs=44.9

Q ss_pred             cccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCC
Q psy12647        201 GHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFP  253 (410)
Q Consensus       201 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  253 (410)
                      ++.|.....|..|+ .+|.++++|.|++|++.|.....|..|++.|.+++||.
T Consensus         3 ~k~~~~~~~l~~h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPR-SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCH-HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHH-HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            35677778888887 88999999999999999999999999999999888763

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=4.5e-08  Score=57.10  Aligned_cols=35  Identities=29%  Similarity=0.469  Sum_probs=32.2

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ..|.+++||.|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            46889999999999999999999999999999874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=5e-08  Score=59.90  Aligned_cols=40  Identities=18%  Similarity=0.217  Sum_probs=36.5

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      .+|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            6788899999999999999999999999999999999884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.9e-08  Score=60.29  Aligned_cols=39  Identities=31%  Similarity=0.578  Sum_probs=34.5

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  254 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  254 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            678888999999999999999999999999988888877

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=3.3e-08  Score=60.70  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=36.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SG-SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CC-SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cc-cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            55 6788888999999999999999999999999988888884

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=8.9e-08  Score=59.39  Aligned_cols=41  Identities=29%  Similarity=0.403  Sum_probs=37.3

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++||.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999864

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=2.4e-08  Score=62.00  Aligned_cols=43  Identities=23%  Similarity=0.317  Sum_probs=36.1

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcC-CCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTD-ERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+ ++||.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SG-SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CC-CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             Cc-cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44 678888888999999999888888889888888 88888864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.7e-08  Score=60.43  Aligned_cols=39  Identities=31%  Similarity=0.527  Sum_probs=35.8

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  254 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  254 (410)
                      .+|.++++|.|+.|++.|.....|..|++.|.+++||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            678899999999999999999999999999999999887

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=6.6e-08  Score=56.35  Aligned_cols=35  Identities=26%  Similarity=0.343  Sum_probs=32.1

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      .+|.+++||.|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            46889999999999999999999999999999874

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.5e-08  Score=60.57  Aligned_cols=41  Identities=29%  Similarity=0.427  Sum_probs=35.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCC
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  254 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  254 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SS-GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CC-CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             Cc-cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44 678889999999999999999999999999999988877

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3.2e-08  Score=61.45  Aligned_cols=43  Identities=28%  Similarity=0.383  Sum_probs=36.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SG-SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cc-cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 67888889999999999999999999998888888888864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=5.3e-08  Score=56.82  Aligned_cols=35  Identities=20%  Similarity=0.438  Sum_probs=31.8

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +.|.+++||.|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            46889999999999999999999999999998864

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.5e-08  Score=61.26  Aligned_cols=41  Identities=32%  Similarity=0.489  Sum_probs=34.4

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++||.|+.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56888888888888888888888888888888888888863

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=5.4e-08  Score=56.75  Aligned_cols=35  Identities=26%  Similarity=0.484  Sum_probs=30.9

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ..|.+++||.|++|++.|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35788999999999999999999999999998864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=4.5e-09  Score=73.03  Aligned_cols=53  Identities=19%  Similarity=0.325  Sum_probs=33.9

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +++.|..|++.|. ...|..|.  .|.+++||.|+.|++.|. ...|..|+++|.++
T Consensus        16 r~~~C~~C~~~~~-~~~L~~H~--~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           16 RLAVCQHCDLELS-ILKLKEHE--DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCEECSSSCCEEC-HHHHHHHH--HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             cccCCcccChHhh-HHHHHHHH--hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            3455555666663 55666674  566677777777777665 46777777776664

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.3e-08  Score=61.36  Aligned_cols=42  Identities=24%  Similarity=0.382  Sum_probs=37.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SG-SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CC-CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cc-cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55 6788999999999999999999999999999999999986

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9.7e-08  Score=55.64  Aligned_cols=35  Identities=26%  Similarity=0.477  Sum_probs=31.6

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ..|.+++||.|+.|++.|.....|..|+++|++++
T Consensus         2 s~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            2 SSGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CTTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            35788999999999999999999999999999864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9.5e-08  Score=57.57  Aligned_cols=39  Identities=28%  Similarity=0.437  Sum_probs=34.6

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  254 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  254 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            568888999999999999999999999999999888877

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=8.1e-08  Score=59.25  Aligned_cols=41  Identities=32%  Similarity=0.485  Sum_probs=35.4

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCcc
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  256 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  256 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            56888888999999999999999999998888888888863

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.45  E-value=7e-08  Score=55.88  Aligned_cols=32  Identities=22%  Similarity=0.406  Sum_probs=28.0

Q ss_pred             cCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       349 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      +.+++||.|++|+++|.++++|.+|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46889999999999999999999998       777764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.2e-08  Score=60.24  Aligned_cols=42  Identities=26%  Similarity=0.386  Sum_probs=36.9

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ .+|.++++|.|++|++.|.....|..|++.|.+++||.|.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SG-SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CC-CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CC-cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            55 6788899999999999999999999999999999998874

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=9.5e-08  Score=58.61  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=36.7

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCc
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCP  255 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  255 (410)
                      |+ ++|.++++|.|++|++.|.....|..|++.|.+++||.|.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SG-SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CC-cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            44 6788999999999999999999999999999999988763

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=1.3e-07  Score=59.19  Aligned_cols=42  Identities=29%  Similarity=0.460  Sum_probs=36.4

Q ss_pred             hhcCCCCccccC--CCCcccCCHHHHHHHHHHhcCCCCCCCccc
Q psy12647        216 RLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPFPCPVC  257 (410)
Q Consensus       216 ~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  257 (410)
                      ++|.++++|.|.  .|++.|.....|..|++.|.+++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568888889997  799999999999999988888889988876

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.1e-07  Score=55.84  Aligned_cols=34  Identities=21%  Similarity=0.413  Sum_probs=30.2

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHH-HHhhcCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQH-VRQHTDE  380 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  380 (410)
                      ++|.+++||.|+.|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            568899999999999999999999999 8888874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.39  E-value=1.3e-07  Score=59.29  Aligned_cols=34  Identities=21%  Similarity=0.368  Sum_probs=29.4

Q ss_pred             hcCCCCCcccCcCcccccCcHhHHHHHH-hhcCCC
Q psy12647        348 LHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDER  381 (410)
Q Consensus       348 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  381 (410)
                      +|++++||.|++|++.|....+|..|++ +|+++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            5889999999999999999999999999 998874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.34  E-value=2.6e-07  Score=54.19  Aligned_cols=34  Identities=29%  Similarity=0.374  Sum_probs=30.7

Q ss_pred             hcCCCCCcccCc--CcccccCcHhHHHHHHhhcCCC
Q psy12647        348 LHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       348 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      .|++++||.|++  |++.|...+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478899999985  9999999999999999999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.34  E-value=2.2e-08  Score=56.75  Aligned_cols=31  Identities=19%  Similarity=0.562  Sum_probs=20.0

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCCCc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDERPF  383 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  383 (410)
                      +||.|+.|++.|...++|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3566666666666666666666666666655

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=1.1e-08  Score=60.27  Aligned_cols=36  Identities=17%  Similarity=0.358  Sum_probs=30.9

Q ss_pred             HhhcCCCCccCccccccccccccCccCCCCCCCCCC
Q psy12647        375 RQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL  410 (410)
Q Consensus       375 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  410 (410)
                      ++|++++||+|..|+++|..++.|..|+...|.++|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   37 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNIL   37 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCcC
Confidence            578999999999999999999999999445666654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.30  E-value=7e-08  Score=60.20  Aligned_cols=39  Identities=21%  Similarity=0.558  Sum_probs=33.8

Q ss_pred             HHHHHhhcCCCCCcccC--cCcccccCcHhHHHHHHhhcCCC
Q psy12647        342 TQHLARLHTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       342 ~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ..|+ ..|.+++||.|+  .|++.|...++|..|+++|++++
T Consensus         7 ~~~~-~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGS-CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHH-hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3454 679999999996  79999999999999999999874

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.30  E-value=5.1e-07  Score=59.69  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=30.7

Q ss_pred             CCccccc--ccCccCChhhHHHHHHhhcCCCCCcccCc
Q psy12647        324 IQYTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ  359 (410)
Q Consensus       324 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  359 (410)
                      +||+|.+  |++.|...+.|..|++++|++++||.|..
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            6788865  99999999999999767899999998865

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.28  E-value=5.1e-07  Score=51.36  Aligned_cols=32  Identities=22%  Similarity=0.413  Sum_probs=29.7

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYP  356 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  356 (410)
                      ++|.|.+|++.|...+.|..|+ .+|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHI-TLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHH-HHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHH-HHhCCCCCCC
Confidence            4799999999999999999998 8999999985

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=9.9e-07  Score=58.89  Aligned_cols=43  Identities=26%  Similarity=0.253  Sum_probs=36.1

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccc
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQR  390 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  390 (410)
                      ..+.+++||.|.+|++.|...+.|..|+++|+++. ..+.+++.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            35778999999999999999999999999999864 55666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=5.1e-07  Score=49.80  Aligned_cols=30  Identities=20%  Similarity=0.499  Sum_probs=24.4

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ++||.|+.|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            467888888888888888888888888764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.24  E-value=8.2e-07  Score=48.55  Aligned_cols=29  Identities=34%  Similarity=0.696  Sum_probs=23.1

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46888888888888888888888887753

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.24  E-value=5.6e-07  Score=49.28  Aligned_cols=29  Identities=24%  Similarity=0.739  Sum_probs=22.7

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46788888888888888888888887753

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.22  E-value=1e-06  Score=52.18  Aligned_cols=37  Identities=30%  Similarity=0.415  Sum_probs=29.4

Q ss_pred             cCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCC
Q psy12647        218 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPC  254 (410)
Q Consensus       218 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  254 (410)
                      |.++++|.|++|++.|.....|..|++.|.++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4567788888888888888888888888888887764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.21  E-value=1.1e-06  Score=48.42  Aligned_cols=30  Identities=17%  Similarity=0.459  Sum_probs=24.2

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDERP  382 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  382 (410)
                      +||.|+.|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            468888888888888888888888887653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=2.6e-07  Score=66.13  Aligned_cols=58  Identities=26%  Similarity=0.454  Sum_probs=50.4

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCCCCCccchhhhhhcCCcccccccchhcccCchhhcccccccCCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKGLESFTFSLRLFCLYFPQELISHSSYHGGE  294 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~~~l~~H~~~~~~~  294 (410)
                      .+|.++++|.|++|++.|.....|..|++.|.+++||.|..|..    ..                 .|..|.+.+.+.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~-----------------~~~~~~~~~~~~   75 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RK-----------------QLLSKQKYADGA   75 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CC-----------------CCCCCCCCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HH-----------------HHHhhhcccccc
Confidence            56889999999999999999999999999999999999987653    33                 888888888774

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.19  E-value=1.2e-06  Score=49.22  Aligned_cols=30  Identities=23%  Similarity=0.580  Sum_probs=24.9

Q ss_pred             CCCcccC--cCcccccCcHhHHHHHHhhcCCC
Q psy12647        352 SLSYPCT--QCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       352 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ++||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4688888  78888888888888888888764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=9.3e-07  Score=48.24  Aligned_cols=29  Identities=24%  Similarity=0.526  Sum_probs=23.8

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47888888888888888888888888764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=8.3e-07  Score=48.49  Aligned_cols=29  Identities=28%  Similarity=0.644  Sum_probs=23.8

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47888888888888888888888888764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.16  E-value=1.1e-06  Score=48.94  Aligned_cols=29  Identities=38%  Similarity=0.717  Sum_probs=21.6

Q ss_pred             CCcccC--cCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCT--QCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            467776  78888888788888877777753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.15  E-value=8.6e-07  Score=48.07  Aligned_cols=28  Identities=29%  Similarity=0.596  Sum_probs=20.8

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      ++||.|+.|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3677777788777777777777777654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=1.2e-06  Score=46.99  Aligned_cols=27  Identities=22%  Similarity=0.610  Sum_probs=21.2

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      ++||.|+.|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888887764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.41  E-value=3.3e-07  Score=50.30  Aligned_cols=28  Identities=43%  Similarity=0.630  Sum_probs=18.6

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +||.|+.|++.|...++|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3566777777777666777776666654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=8.8e-07  Score=47.65  Aligned_cols=27  Identities=26%  Similarity=0.559  Sum_probs=19.6

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      ++||.|+.|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            357777777777777777777777663

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.11  E-value=2.5e-06  Score=48.93  Aligned_cols=35  Identities=34%  Similarity=0.592  Sum_probs=29.0

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  251 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  251 (410)
                      +|.++++|.|++|++.|.....|..|++.|.+++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36778888999999999988899999888887654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=2.1e-06  Score=50.09  Aligned_cols=36  Identities=19%  Similarity=0.436  Sum_probs=31.6

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  251 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  251 (410)
                      ++|.++++|.|++|++.|.....|..|++.|.+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            468889999999999999999999999999888764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.38  E-value=4e-07  Score=50.33  Aligned_cols=28  Identities=39%  Similarity=0.729  Sum_probs=19.3

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5667777777777777777777766654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.07  E-value=3e-06  Score=48.66  Aligned_cols=35  Identities=23%  Similarity=0.461  Sum_probs=28.7

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHHHhcCCCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDERP  251 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  251 (410)
                      +|.++++|.|++|++.|.....|..|++.|.+++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36778888888888888888888888888877654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.07  E-value=1.8e-06  Score=46.28  Aligned_cols=26  Identities=31%  Similarity=0.664  Sum_probs=17.5

Q ss_pred             CcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      ||.|+.|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777776665

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.04  E-value=2.5e-06  Score=49.70  Aligned_cols=36  Identities=25%  Similarity=0.414  Sum_probs=30.4

Q ss_pred             HHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        213 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       213 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      |+ ++|.++++|.|+.|++.|.....|..|++.|.++
T Consensus         2 H~-~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 ST-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CS-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CC-CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            44 6788899999999999999999999999888653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.01  E-value=2.6e-06  Score=46.87  Aligned_cols=27  Identities=26%  Similarity=0.529  Sum_probs=17.0

Q ss_pred             CcccCcCcccccCcHhHHHH-HHhhcCC
Q psy12647        354 SYPCTQCPGKFYSAYELRQH-VRQHTDE  380 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  380 (410)
                      ||.|+.|++.|...+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4566554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.95  E-value=5.6e-07  Score=50.76  Aligned_cols=31  Identities=16%  Similarity=0.413  Sum_probs=28.4

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSY  355 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  355 (410)
                      ++|.|.+|++.|...+.|..|+ .+|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHI-KTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSST-TSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHH-HHHccCCCC
Confidence            4799999999999999999998 899999887

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=1.4e-06  Score=46.25  Aligned_cols=24  Identities=33%  Similarity=0.873  Sum_probs=11.6

Q ss_pred             CcccCcCcccccCcHhHHHHHHhh
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h  377 (410)
                      ||.|+.|++.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            444444444444444444444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=9.2e-06  Score=46.88  Aligned_cols=34  Identities=21%  Similarity=0.425  Sum_probs=29.0

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      ..|.++++|.|++|++.|.....|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3578888999999999999999999999888765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=9.5e-06  Score=46.78  Aligned_cols=34  Identities=29%  Similarity=0.456  Sum_probs=29.3

Q ss_pred             hhcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      ..|.++++|.|++|++.|.....|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3578888999999999999999999999888765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=1.2e-05  Score=47.09  Aligned_cols=33  Identities=21%  Similarity=0.414  Sum_probs=27.9

Q ss_pred             hcCCCCccccCC--CCcccCCHHHHHHHHHHhcCC
Q psy12647        217 LHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       217 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      .+.+++||+|++  |++.|...+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467888999986  999999999999999988765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=1e-05  Score=47.31  Aligned_cols=35  Identities=23%  Similarity=0.433  Sum_probs=29.7

Q ss_pred             cCCCCccccC--CCCcccCCHHHHHHHHHHhcCCCCC
Q psy12647        218 HTGSLSYPCT--QCPGKFYSAYELRQHVRQHTDERPF  252 (410)
Q Consensus       218 H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~  252 (410)
                      |.++++|.|+  .|++.|.....|..|++.|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678889998  4999999999999999888888776

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=1.4e-05  Score=46.00  Aligned_cols=33  Identities=27%  Similarity=0.376  Sum_probs=28.3

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      .|.++++|.|++|++.|.....|..|++.|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            577888899999999999999999998888765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.84  E-value=9e-06  Score=47.27  Aligned_cols=34  Identities=18%  Similarity=0.353  Sum_probs=29.2

Q ss_pred             hhcCCCCccccCCCCcccCCH-HHHHHHHHHhcCC
Q psy12647        216 RLHTGSLSYPCTQCPGKFYSA-YELRQHVRQHTDE  249 (410)
Q Consensus       216 ~~H~~~~~~~C~~C~~~f~~~-~~l~~H~~~~~~~  249 (410)
                      ++|.++++|.|+.|++.|... ..|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            468888899999999999998 8999999888765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.82  E-value=1e-05  Score=46.64  Aligned_cols=33  Identities=27%  Similarity=0.531  Sum_probs=26.9

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      .|.++++|.|++|++.|.....|..|++.|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            567788888888888888888888888887654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.79  E-value=1.9e-05  Score=45.52  Aligned_cols=33  Identities=27%  Similarity=0.481  Sum_probs=27.7

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      .|.++++|.|+.|++.|.....|..|++.|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            467788889999999999888999998888765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.77  E-value=9.7e-06  Score=46.73  Aligned_cols=26  Identities=23%  Similarity=0.344  Sum_probs=20.0

Q ss_pred             cCCCCccccCCCCcccCCHHHHHHHH
Q psy12647        218 HTGSLSYPCTQCPGKFYSAYELRQHV  243 (410)
Q Consensus       218 H~~~~~~~C~~C~~~f~~~~~l~~H~  243 (410)
                      +.+++||.|+.|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            35677788888888888888887777

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=1.7e-05  Score=43.36  Aligned_cols=30  Identities=33%  Similarity=0.803  Sum_probs=25.1

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      ++|.|..|++.|...+.|..|+..+|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478999999999999999999448888763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.76  E-value=1.3e-05  Score=43.47  Aligned_cols=29  Identities=28%  Similarity=0.553  Sum_probs=24.3

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      ++|.|..|++.|...+.|..|+ .+|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHI-LLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHH-TGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHH-HHhcCCC
Confidence            4788999999999999999997 7887753

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.76  E-value=1.7e-05  Score=42.96  Aligned_cols=29  Identities=28%  Similarity=0.642  Sum_probs=24.4

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      ++|.|.+|++.|...+.|..|+ .+|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHH-HHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHH-HHhcCCC
Confidence            4789999999999999999997 7787753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.74  E-value=1.3e-05  Score=43.47  Aligned_cols=27  Identities=30%  Similarity=0.656  Sum_probs=20.0

Q ss_pred             CCcccC--cCcccccCcHhHHHHHHhhcC
Q psy12647        353 LSYPCT--QCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       353 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      +||.|+  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            367777  777777777777777777753

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.70  E-value=2.9e-05  Score=42.91  Aligned_cols=29  Identities=38%  Similarity=0.729  Sum_probs=24.9

Q ss_pred             CCcccc--cccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCH--MCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      ++|.|.  .|++.|...+.|..|+ .+|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHH-HHhcCCC
Confidence            478897  8999999999999998 8888764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.70  E-value=2.2e-05  Score=42.80  Aligned_cols=30  Identities=17%  Similarity=0.382  Sum_probs=25.0

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLS  354 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  354 (410)
                      ++|.|.+|++.|...+.|..|+ .+|.++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHI-KTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHH-HHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHH-HHHccCCC
Confidence            4789999999999999999998 77777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.68  E-value=2.3e-05  Score=48.70  Aligned_cols=34  Identities=21%  Similarity=0.368  Sum_probs=25.9

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHH-HhcCCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVR-QHTDER  250 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~  250 (410)
                      +|.++++|.|.+|++.|.....|..|++ .|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4778888888888888888888888888 776654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.67  E-value=6.9e-05  Score=49.59  Aligned_cols=47  Identities=17%  Similarity=0.273  Sum_probs=32.0

Q ss_pred             ccCccCChhhHHHHHHhhcCCCC------CcccC--cCcccccCcHhHHHHHHhh
Q psy12647        331 CGHMFTCKRRLTQHLARLHTGSL------SYPCT--QCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       331 C~~~f~~~~~l~~H~~~~H~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  377 (410)
                      |++.|.+...|..|+...|.+.+      +|.|.  .|++.+.....|.+|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            66666666666666655665544      67786  5777777777788887764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=2.4e-05  Score=42.67  Aligned_cols=28  Identities=29%  Similarity=0.621  Sum_probs=21.6

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      ++|.|..|++.|.....|..|+ .+|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHL-ETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HHhccC
Confidence            4678888888888888888887 677765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.66  E-value=2.8e-05  Score=41.29  Aligned_cols=27  Identities=33%  Similarity=0.767  Sum_probs=21.2

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      +|.|.+|++.|...+.|..|+ .+|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~-~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQ-RVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHG-GGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHH-HHcCCC
Confidence            478888999999888899997 777653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=1.6e-05  Score=43.04  Aligned_cols=29  Identities=38%  Similarity=0.769  Sum_probs=24.0

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      ++|.|.+|++.|.....|..|+ .+|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHL-RIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHH-HHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHH-HHhcCCC
Confidence            4788999999999999999997 7787653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=2.1e-05  Score=42.53  Aligned_cols=29  Identities=24%  Similarity=0.478  Sum_probs=24.3

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      ++|.|..|++.|...+.|..|+ .+|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHL-KIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHH-HHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHH-HHhccCC
Confidence            4789999999999999999997 7787653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.82  E-value=6.8e-06  Score=43.45  Aligned_cols=25  Identities=16%  Similarity=0.481  Sum_probs=22.9

Q ss_pred             CCccCccccccccccccCccCCCCC
Q psy12647        381 RPFPCPVCQRTFRRKVCTTPSPQPQ  405 (410)
Q Consensus       381 ~~~~C~~C~~~f~~~~~l~~H~~~~  405 (410)
                      +||+|.+||++|..++.|..|++..
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5899999999999999999998763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.77  E-value=8.4e-06  Score=44.35  Aligned_cols=28  Identities=43%  Similarity=0.770  Sum_probs=23.3

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      ++|.|.+|++.|...+.|..|+ .+|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHV-RQHTGE   28 (29)
Confidence            3688999999999999999997 778765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.76  E-value=8.6e-06  Score=44.64  Aligned_cols=28  Identities=21%  Similarity=0.374  Sum_probs=24.8

Q ss_pred             CCCccCccccccccccccCccCCCCCCC
Q psy12647        380 ERPFPCPVCQRTFRRKVCTTPSPQPQHL  407 (410)
Q Consensus       380 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~  407 (410)
                      ++||+|..|+++|.....|..|++..++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            4789999999999999999999987543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.58  E-value=5.4e-05  Score=43.88  Aligned_cols=33  Identities=27%  Similarity=0.338  Sum_probs=27.7

Q ss_pred             hcCCCCccccCC--CCcccCCHHHHHHHHHHhcCC
Q psy12647        217 LHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       217 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      .|.++++|.|.+  |++.|...+.|..|+++|.++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            367888899984  999999999999999888765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.55  E-value=6.2e-05  Score=41.82  Aligned_cols=29  Identities=24%  Similarity=0.529  Sum_probs=24.7

Q ss_pred             CCcccc--cccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCH--MCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      ++|.|.  .|++.|...+.|..|+ .+|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHH-HHccCCC
Confidence            478898  8999999999999997 8888764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.53  E-value=4.5e-05  Score=40.87  Aligned_cols=26  Identities=38%  Similarity=0.930  Sum_probs=18.1

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      ++|.|..|++.|...+.|..|+ .+|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHY-RVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH-TTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HhcC
Confidence            3577777777777777777776 5564

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.48  E-value=5.3e-05  Score=40.22  Aligned_cols=24  Identities=29%  Similarity=0.636  Sum_probs=14.4

Q ss_pred             CcccccccCccCChhhHHHHHHhhc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      +|.|..|++.|...+.|..|+ .+|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHL-RTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHH-HHC
T ss_pred             CccCCCcChhhCCHHHHHHHH-HHc
Confidence            556666666666666666665 444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.47  E-value=4.2e-05  Score=40.69  Aligned_cols=24  Identities=25%  Similarity=0.570  Sum_probs=13.9

Q ss_pred             CcccccccCccCChhhHHHHHHhhc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      +|.|..|++.|...+.|..|+ .+|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHM-RGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHH-TTC
T ss_pred             CcCCCCCCcccCCHHHHHHHH-Hhc
Confidence            455666666666666666665 444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.40  E-value=0.0002  Score=47.31  Aligned_cols=52  Identities=21%  Similarity=0.393  Sum_probs=44.5

Q ss_pred             cccCcccccccccChhhHHHHHH-cCC--C------Ccccc--cccCccCChhhHHHHHHhhc
Q psy12647        298 YVCNHMQCTRRFHSASLLARHVS-THA--I------QYTCH--MCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       298 ~~C~~~~C~~~f~~~~~l~~H~~-~~~--~------~~~C~--~C~~~f~~~~~l~~H~~~~H  349 (410)
                      +.|.|..|++.|.+...|..|+. .|.  +      +|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            67888899999999999999985 554  2      79998  69999999999999996554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.33  E-value=0.00022  Score=47.42  Aligned_cols=34  Identities=32%  Similarity=0.368  Sum_probs=29.3

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHHHhcCCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  250 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  250 (410)
                      .+.+++||.|.+|++.|.....|..|+++|.++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            3667889999999999999999999999988764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.22  E-value=0.00012  Score=45.07  Aligned_cols=35  Identities=23%  Similarity=0.399  Sum_probs=29.9

Q ss_pred             HHHHhhhhcCCCCceecc--cccccccCchhHHHHHHH
Q psy12647         75 LKDHVNKIHLHPKTFSCN--SCGQTWLGYTSWKQHVAA  110 (410)
Q Consensus        75 l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~  110 (410)
                      +..| ...|.++++|.|.  .|++.|.....|..|++.
T Consensus         6 ~~~~-~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A            6 SIDK-YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             SGGG-SCEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             HHHH-HhccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            3445 4568999999996  799999999999999988

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.06  E-value=0.00026  Score=37.98  Aligned_cols=27  Identities=44%  Similarity=1.064  Sum_probs=21.5

Q ss_pred             CCcccc--cccCccCChhhHHHHHHhhcCC
Q psy12647        324 IQYTCH--MCGHMFTCKRRLTQHLARLHTG  351 (410)
Q Consensus       324 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~  351 (410)
                      ++|.|.  .|++.|...+.|..|+ .+|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~-~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHK-KIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHH-GGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHH-HHhCC
Confidence            367888  8888888888888887 77753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.98  E-value=0.0009  Score=54.18  Aligned_cols=84  Identities=14%  Similarity=0.237  Sum_probs=61.5

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC-CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHH
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA-IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHV  374 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  374 (410)
                      -...|++..|+..+. ...+..|++.-. .+..|+.|+..+ .+..|..|+ ...-..++-.|+.|+..+. ...|..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~-~~~C~~r~~~C~~C~~~~~-~~~l~~H~  156 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHI-LKDCPRRQVSCDNCAASMA-FEDKEIHD  156 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHH-HHTCTTCEEECTTTCCEEE-GGGHHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHh-hhhCCCCCeECCCCCCccC-HHHHHhHH
Confidence            556676558887654 667889986544 788999999988 566799997 5555667778999998774 47789999


Q ss_pred             HhhcCCCCc
Q psy12647        375 RQHTDERPF  383 (410)
Q Consensus       375 ~~h~~~~~~  383 (410)
                      .++.|+.++
T Consensus       157 ~~~~~~~~~  165 (170)
T 3hcs_A          157 QNCPLALEH  165 (170)
T ss_dssp             TTCCC----
T ss_pred             HhCcChhhh
Confidence            998887653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.51  E-value=0.0034  Score=50.72  Aligned_cols=83  Identities=14%  Similarity=0.248  Sum_probs=61.1

Q ss_pred             ceeecCcccccccccChhHHHHHHhhCCC-CcccccccccccChhHHHHHHhhhcCCCCccccCCCCcccCCHHHHHHHH
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTHAI-QYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHV  243 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~-~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  243 (410)
                      ....|++.+|+.... ...+..|...-.. +..|+.|+..+ ....|..|+ ...-+.+...|+.|+..+. ...|..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~-~~~C~~r~~~C~~C~~~~~-~~~l~~H~  156 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHI-LKDCPRRQVSCDNCAASMA-FEDKEIHD  156 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHH-HHTCTTCEEECTTTCCEEE-GGGHHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHh-hhhCCCCCeECCCCCCccC-HHHHHhHH
Confidence            567786558988765 6678899854332 77899999987 677899998 5555677889999988774 46788999


Q ss_pred             HHhcCCCC
Q psy12647        244 RQHTDERP  251 (410)
Q Consensus       244 ~~~~~~~~  251 (410)
                      ....++.+
T Consensus       157 ~~~~~~~~  164 (170)
T 3hcs_A          157 QNCPLALE  164 (170)
T ss_dssp             TTCCC---
T ss_pred             HhCcChhh
Confidence            88877654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.92  E-value=0.0015  Score=48.84  Aligned_cols=30  Identities=23%  Similarity=0.379  Sum_probs=27.1

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHh
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQ  376 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  376 (410)
                      ..|+|++||.|..|++.|.+.++|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            678899999999999999999999999875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.60  E-value=0.001  Score=49.66  Aligned_cols=32  Identities=13%  Similarity=0.137  Sum_probs=28.7

Q ss_pred             HHHhhcCCCCccCccccccccccccCccCCCC
Q psy12647        373 HVRQHTDERPFPCPVCQRTFRRKVCTTPSPQP  404 (410)
Q Consensus       373 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  404 (410)
                      +...|+|++||.|..|++.|++...|..|++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34568899999999999999999999999875

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.44  E-value=0.014  Score=44.38  Aligned_cols=74  Identities=20%  Similarity=0.187  Sum_probs=47.4

Q ss_pred             CcccccCcccccccccChhhHHHHHH--cCC---CCcccccc------cCccCChhhHHHHHHhhcCCCCCcccCcCccc
Q psy12647        295 ERRYVCNHMQCTRRFHSASLLARHVS--THA---IQYTCHMC------GHMFTCKRRLTQHLARLHTGSLSYPCTQCPGK  363 (410)
Q Consensus       295 ~~~~~C~~~~C~~~f~~~~~l~~H~~--~~~---~~~~C~~C------~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~  363 (410)
                      ..++.|.  .|+..|.+.+.+..|..  .|.   +.+.+...      +..+....    +. ..+.+.+.|.|.+|...
T Consensus        30 ~~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~C~~C~~~  102 (127)
T 1zu1_A           30 FSDTQCK--VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AE-ISDGEDRSKCCPVCNMT  102 (127)
T ss_dssp             BCSSEET--TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SC-CSSCCCTTTEETTTTEE
T ss_pred             CCCCcCc--CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cc-cccCCCCCeEcCCCCCE
Confidence            3678899  99999999999999983  343   23333111      11221111    11 34556677888888888


Q ss_pred             ccCcHhHHHHHH
Q psy12647        364 FYSAYELRQHVR  375 (410)
Q Consensus       364 f~~~~~l~~H~~  375 (410)
                      |.....|..|+.
T Consensus       103 f~s~~~~~~H~~  114 (127)
T 1zu1_A          103 FSSPVVAESHYI  114 (127)
T ss_dssp             CSSHHHHHHHHT
T ss_pred             eCCHHHHHHHHC
Confidence            888888888874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.36  E-value=0.0098  Score=45.24  Aligned_cols=24  Identities=13%  Similarity=0.248  Sum_probs=21.6

Q ss_pred             CCceecccccccccCchhHHHHHH
Q psy12647         86 PKTFSCNSCGQTWLGYTSWKQHVA  109 (410)
Q Consensus        86 ~~~~~C~~C~~~f~~~~~l~~H~~  109 (410)
                      .+++.|.+|+..|.+...+..|..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~   53 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQ   53 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHC
Confidence            467999999999999999999984

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.72  E-value=0.064  Score=31.83  Aligned_cols=23  Identities=26%  Similarity=0.459  Sum_probs=16.0

Q ss_pred             CCcccCcCcccccCcHhHHHHHH
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVR  375 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~  375 (410)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45667777777777777777766

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.43  E-value=0.055  Score=30.01  Aligned_cols=28  Identities=18%  Similarity=0.456  Sum_probs=20.2

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      .|.|++|.+.|.+...|..|....|..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            3677777777777777777777777644

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.85  E-value=0.11  Score=28.81  Aligned_cols=26  Identities=19%  Similarity=0.498  Sum_probs=16.5

Q ss_pred             cccccccccccChhHHHHHHhhhcCC
Q psy12647        195 YTCHMCGHMFTCKRRLTQHLARLHTG  220 (410)
Q Consensus       195 ~~C~~C~~~f~~~~~l~~H~~~~H~~  220 (410)
                      |.|++|-+.+.+...|..|....|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            55666666666666666666666654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.76  E-value=0.28  Score=29.09  Aligned_cols=21  Identities=24%  Similarity=0.570  Sum_probs=11.5

Q ss_pred             CcccccccCccCChhhHHHHH
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHL  345 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~  345 (410)
                      .|.|+.|+..|.....|..||
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hm   32 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHM   32 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhh
Confidence            355555555555555555555

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=86.48  E-value=0.85  Score=30.61  Aligned_cols=45  Identities=31%  Similarity=0.662  Sum_probs=34.4

Q ss_pred             CCCceecccccccccCchhHHHHHHHhhhcCCCCcccCCcCcccccCcc
Q psy12647         85 HPKTFSCNSCGQTWLGYTSWKQHVAACREKRRKETFPCKRCDERFSTRD  133 (410)
Q Consensus        85 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~  133 (410)
                      ..-.|.|..|+.++. +..+..|...+   .+...|.|.+|+..|....
T Consensus         7 ~MV~F~C~~Cgd~lK-K~kv~~H~~~C---r~~~~~SCIDC~~~F~~~~   51 (79)
T 1wjv_A            7 GMVFFTCNACGESVK-KIQVEKHVSNC---RNCECLSCIDCGKDFWGDD   51 (79)
T ss_dssp             CCCEEEESSSCCEEE-TTHHHHHHHHC---TTCCEEEETTTTEEEEGGG
T ss_pred             ceeEEEcCCCCCeee-cccchhHHhhC---CCCCcEEecccCCeeCCCC
Confidence            344599999998876 45699998764   3345799999999998643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.41  E-value=1.3  Score=24.59  Aligned_cols=23  Identities=17%  Similarity=0.322  Sum_probs=15.4

Q ss_pred             CCcccCcCcccccCcHhHHHHHH
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVR  375 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~  375 (410)
                      .++.|..|+.+|....++..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            45667777777777777777654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.13  E-value=0.95  Score=24.13  Aligned_cols=22  Identities=23%  Similarity=0.691  Sum_probs=10.8

Q ss_pred             cccccccccChhHHHHHHhhhc
Q psy12647        197 CHMCGHMFTCKRRLTQHLARLH  218 (410)
Q Consensus       197 C~~C~~~f~~~~~l~~H~~~~H  218 (410)
                      |..|.+.+.+...|..|++..|
T Consensus        12 crfckkkysdvknlikhire~h   33 (37)
T 2elu_A           12 CRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             ETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            4445555555555555554444

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=82.81  E-value=0.64  Score=31.20  Aligned_cols=45  Identities=16%  Similarity=0.400  Sum_probs=23.8

Q ss_pred             cccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccC
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPS  401 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  401 (410)
                      |.|..|+..+ .+..+..|...=.+-..|.|..|++.|.. .+++.|
T Consensus        11 F~C~~Cgd~l-KK~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           11 FTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEESSSCCEE-ETTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEcCCCCCee-ecccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            5566666543 34456666544333334666666666653 335544

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=80.58  E-value=0.8  Score=27.07  Aligned_cols=13  Identities=38%  Similarity=0.802  Sum_probs=7.1

Q ss_pred             cccccccCccCCh
Q psy12647        326 YTCHMCGHMFTCK  338 (410)
Q Consensus       326 ~~C~~C~~~f~~~  338 (410)
                      |.|..||+.|+..
T Consensus         4 Y~C~rCg~~fs~~   16 (48)
T 4ayb_P            4 YRCGKCWKTFTDE   16 (48)
T ss_dssp             -CCCCTTTTCCCC
T ss_pred             EEeeccCCCccHH
Confidence            5566666666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	410
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 195 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPC 226
           Y C  CG  F+    L  H+ ++HT    + C
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSYPC 357
           Y C  CG  F+    L  H+ ++HT    + C
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	410
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.59
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.54
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.31
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.23
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.19
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.18
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.05
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.04
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.0
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.98
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.91
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.81
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.77
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.73
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.72
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.71
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.7
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.67
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.66
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.65
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.44
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.39
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.38
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.38
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.35
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.27
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.24
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.18
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.07
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.03
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.99
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.98
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.9
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.87
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.83
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.74
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.65
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.57
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.49
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.48
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.39
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.31
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.28
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.26
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.26
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.24
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.22
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.22
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.19
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.18
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.08
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.99
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.98
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.95
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.89
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.83
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.81
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.77
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.77
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.77
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.72
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.65
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.64
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.59
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.59
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.58
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.53
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.47
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.04
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.0
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.88
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.65
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.54
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.4
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.0
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.96
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.77
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.71
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.39
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.35
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.16
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.74
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.25
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.8
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.1
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.98
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.59
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.72
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.54
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.27
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.2
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	89.66
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.62
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.35
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.89
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.28
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.02
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.72
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.32
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.44
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.99
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.57
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	81.62
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	81.29
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	80.81

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=9.2e-17  Score=102.08  Aligned_cols=51  Identities=27%  Similarity=0.589  Sum_probs=30.3

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhcCCCCccCccccccccccccCccCCC
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHTDERPFPCPVCQRTFRRKVCTTPSPQ  403 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  403 (410)
                      |+||.|. ||+.|....+|..|+++|+|++||+|.+||++|+.++.|..|++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            4556663 66666666666666666666666666666666666666666554

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.6e-15  Score=96.16  Aligned_cols=52  Identities=35%  Similarity=0.698  Sum_probs=49.8

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhh
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  377 (410)
                      ++|+|. ||+.|.....|..|+ .+|++++||.|++|+++|.+.+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~-~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHh-hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689994 999999999999998 8999999999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5e-13  Score=76.63  Aligned_cols=37  Identities=35%  Similarity=0.679  Sum_probs=31.1

Q ss_pred             CCCCcccCcCcccccCcHhHHHHHH-hhcCCCCccCcc
Q psy12647        351 GSLSYPCTQCPGKFYSAYELRQHVR-QHTDERPFPCPV  387 (410)
Q Consensus       351 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  387 (410)
                      .++||.|.+||++|...++|.+|++ +|+|+|||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4688888888888888888888875 688888888864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.4e-12  Score=70.70  Aligned_cols=33  Identities=39%  Similarity=0.699  Sum_probs=31.7

Q ss_pred             hcCCCCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        348 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       348 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +|++++||+|.+|+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.9e-12  Score=74.48  Aligned_cols=37  Identities=27%  Similarity=0.498  Sum_probs=34.4

Q ss_pred             HHHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        343 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       343 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +|+ .+|++++||.|++||++|...++|..|+++|+||
T Consensus         2 rH~-~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCC-SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccC-cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            365 8999999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=6.5e-12  Score=71.90  Aligned_cols=36  Identities=28%  Similarity=0.622  Sum_probs=33.9

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCCCcccCc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSLSYPCTQ  359 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  359 (410)
                      +||+|.+||+.|...+.|..|++++|++++||.|++
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            789999999999999999999978999999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.1e-11  Score=70.06  Aligned_cols=35  Identities=31%  Similarity=0.616  Sum_probs=32.4

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      ++|+||+||+|++|+++|..+++|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57999999999999999999999999999999863

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=1.8e-11  Score=69.71  Aligned_cols=35  Identities=26%  Similarity=0.444  Sum_probs=31.3

Q ss_pred             HHHhhcCCCCCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        344 HLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       344 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      |. ++|++|+||.|++|+++|.++++|.+|+++|.+
T Consensus         2 h~-R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 ST-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CS-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CC-CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            44 789999999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=4e-11  Score=66.70  Aligned_cols=32  Identities=25%  Similarity=0.568  Sum_probs=29.8

Q ss_pred             cCCCCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        349 HTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       349 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      |+||+||+|++|++.|.++++|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999999999999999875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.8e-12  Score=73.17  Aligned_cols=34  Identities=29%  Similarity=0.637  Sum_probs=27.6

Q ss_pred             hhcCCCCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        347 RLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       347 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      ++|+||+||+|+.|+++|..+++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4688888888888888888888888887665543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.05  E-value=4.9e-11  Score=63.42  Aligned_cols=29  Identities=34%  Similarity=0.696  Sum_probs=25.2

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|++|+++|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58889999999999999999999998875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=7.2e-11  Score=62.62  Aligned_cols=29  Identities=24%  Similarity=0.826  Sum_probs=26.1

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|++|+++|.++++|.+|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=5.1e-11  Score=62.50  Aligned_cols=28  Identities=29%  Similarity=0.613  Sum_probs=26.2

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      |+||+|++|+++|..+++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9.5e-11  Score=66.00  Aligned_cols=36  Identities=22%  Similarity=0.554  Sum_probs=32.6

Q ss_pred             HhhcCCCCccCccccccccccccCccCCCCCCCCCC
Q psy12647        375 RQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL  410 (410)
Q Consensus       375 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  410 (410)
                      |+|+|+|||+|++|+++|+.+++|..|++..|.+.|
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~l   36 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV   36 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSC
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCCC
Confidence            579999999999999999999999999988888765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.1e-10  Score=65.56  Aligned_cols=33  Identities=27%  Similarity=0.760  Sum_probs=28.4

Q ss_pred             cccCc--CcccccCcHhHHHHHHhhcCCCCccCcc
Q psy12647        355 YPCTQ--CPGKFYSAYELRQHVRQHTDERPFPCPV  387 (410)
Q Consensus       355 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  387 (410)
                      |.|++  |+++|..++.|.+|+++|+|++||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67876  9999999999999999999999998863

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.5e-11  Score=70.12  Aligned_cols=36  Identities=33%  Similarity=0.645  Sum_probs=31.9

Q ss_pred             HHHhhcCCCCccCccccccccccccCccCCCCCCCCC
Q psy12647        373 HVRQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDV  409 (410)
Q Consensus       373 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  409 (410)
                      |.|+|+|+|||+|.+|+++|+.++.|.+|++ .|..|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r-~H~~v   37 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTCC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHh-cCcCC
Confidence            6789999999999999999999999999975 55543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2e-11  Score=68.97  Aligned_cols=34  Identities=35%  Similarity=0.647  Sum_probs=31.4

Q ss_pred             HhhcCCCCccCccccccccccccCccCCCCCCCC
Q psy12647        375 RQHTDERPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       375 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      |+|+|++||+|.+||++|+.++.|..|++..|.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5899999999999999999999999999887753

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=7.3e-11  Score=70.85  Aligned_cols=41  Identities=20%  Similarity=0.549  Sum_probs=36.1

Q ss_pred             hhHHHHHHhhcCCCCCcccCc--CcccccCcHhHHHHHHhhcCCC
Q psy12647        339 RRLTQHLARLHTGSLSYPCTQ--CPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       339 ~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +.|..|+  .|.+++||.|++  |+++|..+++|..|+++|+|+|
T Consensus         5 ~~l~~h~--~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSC--EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchh--hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3456675  499999999987  9999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=1.3e-10  Score=64.52  Aligned_cols=33  Identities=30%  Similarity=0.630  Sum_probs=29.7

Q ss_pred             hcCCCCccCccccccccccccCccCCCCCCCCCC
Q psy12647        377 HTDERPFPCPVCQRTFRRKVCTTPSPQPQHLDVL  410 (410)
Q Consensus       377 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  410 (410)
                      |+|+|||+|.+|+++|++++.|.+|++ .|.+.|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r-~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc-ccCCcC
Confidence            789999999999999999999999986 577654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.1e-09  Score=55.76  Aligned_cols=26  Identities=35%  Similarity=0.593  Sum_probs=21.6

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      +||+|++||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58888888888888888888888874

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.3e-09  Score=57.05  Aligned_cols=28  Identities=32%  Similarity=0.573  Sum_probs=24.1

Q ss_pred             CCcccCc--CcccccCcHhHHHHHHhhcCC
Q psy12647        353 LSYPCTQ--CPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       353 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +||.|++  |+++|..+++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5888888  888888888888888888885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=4e-09  Score=57.58  Aligned_cols=33  Identities=39%  Similarity=0.699  Sum_probs=30.5

Q ss_pred             hcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        217 LHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       217 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      +|++++||+|.+|++.|...+.|..|+++|++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.5e-09  Score=57.03  Aligned_cols=28  Identities=39%  Similarity=0.797  Sum_probs=24.6

Q ss_pred             CCcccCc--CcccccCcHhHHHHHHhhcCC
Q psy12647        353 LSYPCTQ--CPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       353 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +||.|++  |+++|+..++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6889977  999999999999999999885

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.6e-09  Score=56.95  Aligned_cols=29  Identities=38%  Similarity=0.717  Sum_probs=24.0

Q ss_pred             CCcccC--cCcccccCcHhHHHHHHhhcCCC
Q psy12647        353 LSYPCT--QCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       353 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +||.|+  .|+++|+..++|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  48888888888888888888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.70  E-value=4.4e-09  Score=55.70  Aligned_cols=29  Identities=28%  Similarity=0.642  Sum_probs=26.8

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      +||.|++|++.|+..+.|..|+ ++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccCCC
Confidence            5899999999999999999998 9999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=2.9e-09  Score=60.85  Aligned_cols=37  Identities=27%  Similarity=0.498  Sum_probs=33.1

Q ss_pred             HHHhhhcCCCCccccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        212 QHLARLHTGSLSYPCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       212 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      +|+ .+|++++||.|++|++.|...+.|..|+++|++|
T Consensus         2 rH~-~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCC-SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccC-cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            355 7899999999999999999999999999999875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=3.5e-09  Score=59.25  Aligned_cols=33  Identities=33%  Similarity=0.890  Sum_probs=29.7

Q ss_pred             ccccc--ccCccCChhhHHHHHHhhcCCCCCcccCc
Q psy12647        326 YTCHM--CGHMFTCKRRLTQHLARLHTGSLSYPCTQ  359 (410)
Q Consensus       326 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  359 (410)
                      |.|++  |++.|...+.|..|+ ++|++++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCCCCCEeCCC
Confidence            67877  999999999999998 8999999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=7.9e-09  Score=54.59  Aligned_cols=29  Identities=21%  Similarity=0.558  Sum_probs=26.8

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      +||.|++|++.|...+.|..|+ ++|++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~-r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHI-KTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHH-HGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhc-CccCCcC
Confidence            5899999999999999999998 9999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=4.3e-08  Score=52.84  Aligned_cols=29  Identities=24%  Similarity=0.632  Sum_probs=25.5

Q ss_pred             CCCcccCc--CcccccCcHhHHHHHHhhcCC
Q psy12647        352 SLSYPCTQ--CPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       352 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      |+||.|++  |+++|+..++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999863

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=2.9e-08  Score=52.19  Aligned_cols=27  Identities=33%  Similarity=0.755  Sum_probs=22.9

Q ss_pred             CCcccCc--CcccccCcHhHHHHHHhhcC
Q psy12647        353 LSYPCTQ--CPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       353 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  379 (410)
                      +||.|++  |+++|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5888877  88888888888888888876

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=5.8e-08  Score=50.34  Aligned_cols=26  Identities=31%  Similarity=0.659  Sum_probs=21.8

Q ss_pred             CCcccCc--CcccccCcHhHHHHHHhhc
Q psy12647        353 LSYPCTQ--CPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       353 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  378 (410)
                      +||.|++  |+++|+..++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888877  8888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=9e-08  Score=49.85  Aligned_cols=28  Identities=29%  Similarity=0.613  Sum_probs=20.4

Q ss_pred             CCccccCCCCcccCCHHHHHHHHHHhcC
Q psy12647        221 SLSYPCTQCPGKFYSAYELRQHVRQHTD  248 (410)
Q Consensus       221 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~  248 (410)
                      |+||+|++|++.|...+.|..|+++|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677777777777777777777777754

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=4.2e-08  Score=49.75  Aligned_cols=25  Identities=36%  Similarity=0.785  Sum_probs=19.4

Q ss_pred             CCcccccccCccCChhhHHHHHHhhc
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      +||+|.+||+.|...+.|..|+ ++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hq-riH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQ-RIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHH
T ss_pred             CCccCCCCcCeeccCcccccCc-cCC
Confidence            4778888888888888888886 666

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.4e-07  Score=49.98  Aligned_cols=28  Identities=32%  Similarity=0.632  Sum_probs=22.0

Q ss_pred             CCccccc--ccCccCChhhHHHHHHhhcCCC
Q psy12647        324 IQYTCHM--CGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       324 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      +||.|++  |++.|...+.|..|+ ++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHL-RSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHH-HHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhc-CcCcCC
Confidence            4778877  888888888888887 788775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.3e-07  Score=49.08  Aligned_cols=29  Identities=38%  Similarity=0.729  Sum_probs=22.0

Q ss_pred             CCcccc--cccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCH--MCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      +||.|+  .|++.|...+.|..|+ ++|++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-CcccccC
Confidence            467775  4888888888888887 7888774

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=1.5e-07  Score=49.94  Aligned_cols=28  Identities=36%  Similarity=0.855  Sum_probs=20.8

Q ss_pred             CCccccc--ccCccCChhhHHHHHHhhcCCC
Q psy12647        324 IQYTCHM--CGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       324 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      +||.|++  |++.|...+.|..|+ ++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHV-RIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccc-cccCCC
Confidence            4677776  777777777888887 677765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.1e-07  Score=44.63  Aligned_cols=29  Identities=28%  Similarity=0.583  Sum_probs=25.7

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      ++||+|+.|.+.-.+.++|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57899999999999999999999999875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1e-06  Score=44.23  Aligned_cols=29  Identities=28%  Similarity=0.557  Sum_probs=26.0

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      |+||.|++|+..|..+.-+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999874

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=4.4e-07  Score=46.96  Aligned_cols=27  Identities=37%  Similarity=0.787  Sum_probs=16.8

Q ss_pred             cccccCcccccccccChhhHHHHHHcC
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTH  322 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~  322 (410)
                      +||.|+++.|++.|...++|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            356666666666666666666666554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1e-06  Score=42.04  Aligned_cols=25  Identities=32%  Similarity=0.550  Sum_probs=14.7

Q ss_pred             cccCcCcccccCcHhHHHHHHhhcC
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      .+|++|++.|+.+..|..|+|.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666665553

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.03  E-value=1.2e-06  Score=46.98  Aligned_cols=28  Identities=36%  Similarity=0.719  Sum_probs=17.7

Q ss_pred             cccccCcccccccccChhhHHHHHHcCC
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTHA  323 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~  323 (410)
                      +||.|+++.|++.|...+.|.+|+++|.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            5666665556666666666666666654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.99  E-value=1.9e-06  Score=42.62  Aligned_cols=27  Identities=26%  Similarity=0.564  Sum_probs=21.3

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      |+||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578888888888888888888877775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.98  E-value=1.1e-06  Score=52.25  Aligned_cols=40  Identities=18%  Similarity=0.316  Sum_probs=33.7

Q ss_pred             hhHHHHhhhhcCCCCceeccc--ccccccCchhHHHHHHHhhhcCCC
Q psy12647         73 HHLKDHVNKIHLHPKTFSCNS--CGQTWLGYTSWKQHVAACREKRRK  117 (410)
Q Consensus        73 ~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~  117 (410)
                      ..|..| + .|.+++||.|.+  |++.|...+.|..|+++   +.++
T Consensus         5 ~~l~~h-~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~---Htge   46 (47)
T d1ncsa_           5 GSIDKY-V-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQT---HLED   46 (47)
T ss_dssp             SSGGGS-C-EEETTTEEECCCTTCCCEECSSSSHHHHHHH---HTTT
T ss_pred             chhcch-h-hccCCCCeECCcCCCCccccCchHHHhhccc---ccCC
Confidence            345666 4 499999999987  99999999999999999   6655

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=5e-06  Score=41.03  Aligned_cols=27  Identities=37%  Similarity=0.698  Sum_probs=21.1

Q ss_pred             cccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      |.|+.|+....-.+.|..|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888887764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=1.5e-06  Score=45.40  Aligned_cols=25  Identities=40%  Similarity=0.919  Sum_probs=13.1

Q ss_pred             Cccccc--ccCccCChhhHHHHHHhhcC
Q psy12647        325 QYTCHM--CGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       325 ~~~C~~--C~~~f~~~~~l~~H~~~~H~  350 (410)
                      ||.|++  |++.|...+.|..|+ ++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~-r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHI-RIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHT-HHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhc-CccC
Confidence            455544  555555555555554 4544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.4e-06  Score=43.36  Aligned_cols=29  Identities=31%  Similarity=0.710  Sum_probs=14.4

Q ss_pred             cccccccCccCChhhHHHHHHhhcCCCCCc
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLHTGSLSY  355 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  355 (410)
                      ..|..||+.|.....|.+|. ..|++|+||
T Consensus         6 ~~ce~cgk~frdvyhlnrhk-lshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHK-LSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHG-GGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhh-cccCCCCCC
Confidence            34555555555555555553 455555544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=8.2e-06  Score=41.93  Aligned_cols=32  Identities=28%  Similarity=0.652  Sum_probs=28.8

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCCCCcc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDERPFP  384 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  384 (410)
                      +...|..||+.|.+...|.+|...|.|++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34579999999999999999999999999984

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.1e-05  Score=38.47  Aligned_cols=26  Identities=42%  Similarity=0.924  Sum_probs=21.7

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTG  351 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  351 (410)
                      |.+|+.|++.|+.+..|..|+ +.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccCC
Confidence            468899999999999999998 77764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.4e-05  Score=40.12  Aligned_cols=27  Identities=26%  Similarity=0.616  Sum_probs=19.5

Q ss_pred             CCcccCc--CcccccCcHhHHHHHHhhcC
Q psy12647        353 LSYPCTQ--CPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       353 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  379 (410)
                      +||.|.+  |++++++.+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677766  77777777777777776554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.57  E-value=2.1e-05  Score=36.98  Aligned_cols=23  Identities=35%  Similarity=0.709  Sum_probs=13.7

Q ss_pred             cccCcCcccccCcHhHHHHHHhh
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~h  377 (410)
                      |+|..|.++|..+++|.+|.++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666665555

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1e-06  Score=43.66  Aligned_cols=26  Identities=15%  Similarity=0.412  Sum_probs=16.3

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      +||+|+.|.....+.++|..|++.-+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            46666666666666666666665433

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=2.7e-05  Score=37.88  Aligned_cols=24  Identities=29%  Similarity=0.618  Sum_probs=12.3

Q ss_pred             ccCcCcccccCcHhHHHHHHhhcC
Q psy12647        356 PCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       356 ~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      .|..||++|...+.|.+|..+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            355555555555555555555544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=6.9e-05  Score=35.83  Aligned_cols=26  Identities=46%  Similarity=0.866  Sum_probs=21.2

Q ss_pred             ccCcCcccccCcHhHHHHHHhhcCCC
Q psy12647        356 PCTQCPGKFYSAYELRQHVRQHTDER  381 (410)
Q Consensus       356 ~C~~C~~~f~~~~~l~~H~~~h~~~~  381 (410)
                      +|+.|.+.|.++..|..|.|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=5.8e-05  Score=36.57  Aligned_cols=26  Identities=27%  Similarity=0.549  Sum_probs=19.3

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      +||+|..|.+.-.+.+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57777777777777777777777764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=8e-05  Score=36.20  Aligned_cols=26  Identities=35%  Similarity=0.718  Sum_probs=22.1

Q ss_pred             cccccccCccCChhhHHHHHHhhcCCC
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      .-|..||+.|...+.|++|. .+|++|
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccCC
Confidence            56888999999999999997 888875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.28  E-value=6.7e-05  Score=36.79  Aligned_cols=27  Identities=41%  Similarity=0.726  Sum_probs=24.4

Q ss_pred             ceeecCcccccccccChhHHHHHHhhC
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTH  191 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~  191 (410)
                      .+|.|+++.|++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589999999999999999999998765

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00012  Score=36.55  Aligned_cols=27  Identities=30%  Similarity=0.593  Sum_probs=14.6

Q ss_pred             CccccCCCCcccCCHHHHHHHHHHhcC
Q psy12647        222 LSYPCTQCPGKFYSAYELRQHVRQHTD  248 (410)
Q Consensus       222 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  248 (410)
                      +||.|++|+..|..+..+.-|++.|.+
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            455555555555555555555555543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=0.00012  Score=35.89  Aligned_cols=29  Identities=34%  Similarity=0.665  Sum_probs=20.6

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +..|.|+.|...|...-.|+.||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45577777777777777777777777764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00015  Score=35.81  Aligned_cols=27  Identities=19%  Similarity=0.497  Sum_probs=21.0

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      +||.|+.|.+...+.++|..|+++-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            578888888888888888888876443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00017  Score=35.58  Aligned_cols=30  Identities=20%  Similarity=0.408  Sum_probs=25.0

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      +||+|.+|.....+.++|..|++..|+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            578899999988889999999888887653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00016  Score=35.60  Aligned_cols=27  Identities=33%  Similarity=0.581  Sum_probs=23.9

Q ss_pred             cccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      |.|++|+....-.+.|..|+ +.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHI-RsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHI-RTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH-HHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHH-HHhcCCC
Confidence            78999999999999999998 8898874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00012  Score=35.74  Aligned_cols=27  Identities=30%  Similarity=0.591  Sum_probs=15.5

Q ss_pred             CccccCCCCcccCCHHHHHHHHHHhcC
Q psy12647        222 LSYPCTQCPGKFYSAYELRQHVRQHTD  248 (410)
Q Consensus       222 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  248 (410)
                      +||+|..|.....+.+.|..|++.|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455566665555555555555555543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.18  E-value=0.00016  Score=33.97  Aligned_cols=24  Identities=38%  Similarity=0.848  Sum_probs=19.8

Q ss_pred             cccccccCccCChhhHHHHHHhhcC
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      |+|..|.++|..++.|.+|+ ++|.
T Consensus         1 ykcglcersfveksalsrhq-rvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQ-RVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGTC
T ss_pred             CcccchHHHHHHHHHHHHHH-Hhhc
Confidence            67888888888888888886 7774

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.08  E-value=0.00014  Score=36.77  Aligned_cols=27  Identities=33%  Similarity=0.851  Sum_probs=18.2

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTG  351 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  351 (410)
                      ||.|.+|++.|..+..|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            466777777777777777776666655

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00023  Score=35.69  Aligned_cols=25  Identities=44%  Similarity=0.833  Sum_probs=14.1

Q ss_pred             ccccCcccccccccChhhHHHHHHc
Q psy12647        297 RYVCNHMQCTRRFHSASLLARHVST  321 (410)
Q Consensus       297 ~~~C~~~~C~~~f~~~~~l~~H~~~  321 (410)
                      ||.|..+.|++++...++|.+|++.
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHHHh
Confidence            5555555555555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00016  Score=35.49  Aligned_cols=23  Identities=30%  Similarity=0.632  Sum_probs=19.5

Q ss_pred             CcccCcCcccccCcHhHHHHHHh
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQ  376 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~  376 (410)
                      ||.|..|..+|..+.+|..||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68888888888888888888875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.95  E-value=0.00021  Score=35.26  Aligned_cols=21  Identities=24%  Similarity=0.744  Sum_probs=10.3

Q ss_pred             CcccccccCccCChhhHHHHH
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHL  345 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~  345 (410)
                      ||.|.+||+.|.......+|.
T Consensus         3 Pf~C~~CgrkFArsderkRH~   23 (28)
T d1a1ia3           3 PFACDICGRKFARSDERKRHT   23 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHH
T ss_pred             Ccccchhhhhhhcchhhhhhh
Confidence            444455555555544444443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00027  Score=38.43  Aligned_cols=26  Identities=31%  Similarity=0.641  Sum_probs=22.9

Q ss_pred             CCCCCcccCcCcccccCcHhHHHHHH
Q psy12647        350 TGSLSYPCTQCPGKFYSAYELRQHVR  375 (410)
Q Consensus       350 ~~~~~~~C~~C~~~f~~~~~l~~H~~  375 (410)
                      +|-+||.|.+|++.|.+...+.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            36689999999999999999999964

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00039  Score=33.60  Aligned_cols=25  Identities=32%  Similarity=0.716  Sum_probs=13.7

Q ss_pred             CcccccccCccCChhhHHHHHHhhcC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      ||+|..|.+.-...+.|..|+ ++|.
T Consensus         3 p~kck~cdyaaadsssl~kh~-rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHL-RIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHH-HHSC
T ss_pred             CcccccccchhcchhhHhhhh-hccc
Confidence            455555555555555555554 5543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=1.3e-05  Score=43.26  Aligned_cols=31  Identities=16%  Similarity=0.068  Sum_probs=28.6

Q ss_pred             cchHHHHHHHHHhhcCCCcHHHHHHHHhhhc
Q psy12647          6 IGPSVILMLMIMTRYSLPCVDFIQVHLRLHS   36 (410)
Q Consensus         6 ~~~~~~~c~~~~c~~~~~~~~~l~~H~~~h~   36 (410)
                      .+++||.|...+|+.+|.+...|..|...|.
T Consensus         2 ~ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3689999999999999999999999999885

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.77  E-value=0.00025  Score=34.70  Aligned_cols=27  Identities=41%  Similarity=0.726  Sum_probs=23.5

Q ss_pred             cccccCcccccccccChhhHHHHHHcC
Q psy12647        296 RRYVCNHMQCTRRFHSASLLARHVSTH  322 (410)
Q Consensus       296 ~~~~C~~~~C~~~f~~~~~l~~H~~~~  322 (410)
                      .||.|+...|++.|+..+.|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            588999889999999999999998765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.77  E-value=0.00044  Score=37.49  Aligned_cols=28  Identities=36%  Similarity=0.644  Sum_probs=15.2

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcCC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +.|+|.+|++.|.+..+|-=|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            3455555555555555555555555443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00025  Score=35.86  Aligned_cols=25  Identities=32%  Similarity=0.712  Sum_probs=12.8

Q ss_pred             CcccCc--CcccccCcHhHHHHH-Hhhc
Q psy12647        354 SYPCTQ--CPGKFYSAYELRQHV-RQHT  378 (410)
Q Consensus       354 ~~~C~~--C~~~f~~~~~l~~H~-~~h~  378 (410)
                      ||.|+.  |.+.|++.+.-..|. |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            455544  555555555555553 4444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00049  Score=33.89  Aligned_cols=28  Identities=25%  Similarity=0.440  Sum_probs=16.1

Q ss_pred             CCccCccccccccccccCccCCCCCCCC
Q psy12647        381 RPFPCPVCQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       381 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      +||+|.+|...-++.++|..|+++.|+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            3555555555555555555555555554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.65  E-value=0.00052  Score=32.16  Aligned_cols=23  Identities=30%  Similarity=0.785  Sum_probs=15.6

Q ss_pred             CcccccccccccChhHHHHHHhh
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLAR  216 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~  216 (410)
                      ||+|+.|...|..+..|+.||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            56677777777777777777643

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.64  E-value=0.00051  Score=34.70  Aligned_cols=28  Identities=32%  Similarity=0.832  Sum_probs=21.5

Q ss_pred             CcccccccccccChhHHHHHHhhhcCCC
Q psy12647        194 QYTCHMCGHMFTCKRRLTQHLARLHTGS  221 (410)
Q Consensus       194 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  221 (410)
                      ||.|.+|++.|....-|.+|.+..|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            5778888888888888888887777653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.59  E-value=0.00057  Score=33.43  Aligned_cols=28  Identities=32%  Similarity=0.662  Sum_probs=24.9

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      ..|.|..|..+|..+-.|.-|| ..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hm-vshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHM-VSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeee-ecccCC
Confidence            4689999999999999999999 888875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=9.4e-05  Score=37.42  Aligned_cols=28  Identities=18%  Similarity=0.534  Sum_probs=25.4

Q ss_pred             CCccCcc--ccccccccccCccCCCCCCCC
Q psy12647        381 RPFPCPV--CQRTFRRKVCTTPSPQPQHLD  408 (410)
Q Consensus       381 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  408 (410)
                      |||.|.+  |.++|++.++-..|+...|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899998  999999999999998888865

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.58  E-value=0.00068  Score=36.74  Aligned_cols=29  Identities=28%  Similarity=0.613  Sum_probs=20.5

Q ss_pred             CCcccccccCccCChhhHHHHHHhhcCCCC
Q psy12647        324 IQYTCHMCGHMFTCKRRLTQHLARLHTGSL  353 (410)
Q Consensus       324 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  353 (410)
                      +.|.|.+|++.|.+...|--|+ ..|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~-~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM-NVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchH-hhhcchH
Confidence            3577777777777777777776 6676543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0005  Score=33.74  Aligned_cols=23  Identities=13%  Similarity=0.482  Sum_probs=21.2

Q ss_pred             ceecccccccccCchhHHHHHHH
Q psy12647         88 TFSCNSCGQTWLGYTSWKQHVAA  110 (410)
Q Consensus        88 ~~~C~~C~~~f~~~~~l~~H~~~  110 (410)
                      ||.|..|+.+|.+.+.|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999976

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.53  E-value=0.0016  Score=31.02  Aligned_cols=25  Identities=48%  Similarity=0.865  Sum_probs=15.8

Q ss_pred             ccCCCCcccCCHHHHHHHHHHhcCC
Q psy12647        225 PCTQCPGKFYSAYELRQHVRQHTDE  249 (410)
Q Consensus       225 ~C~~C~~~f~~~~~l~~H~~~~~~~  249 (410)
                      +|+.|.++|.++.-|+.|-+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666666666666666666666554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.47  E-value=0.00086  Score=32.93  Aligned_cols=28  Identities=36%  Similarity=0.687  Sum_probs=20.7

Q ss_pred             CCcccCc--CcccccCcHhHHHHHHhhcCC
Q psy12647        353 LSYPCTQ--CPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       353 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      +||.|..  |.+.|.....|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4667754  778888888888887777764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.04  E-value=0.002  Score=30.95  Aligned_cols=23  Identities=17%  Similarity=0.586  Sum_probs=19.3

Q ss_pred             CcccCcCcccccCcHhHHHHHHh
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQ  376 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~  376 (410)
                      ||+|+.||+.+-.+.+|.+|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999988889999888653

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0025  Score=30.85  Aligned_cols=25  Identities=32%  Similarity=0.480  Sum_probs=16.9

Q ss_pred             CcccCcCcccccCcHhHHHHHHhhc
Q psy12647        354 SYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       354 ~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      |-+|+.|.++..++.+|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3457777777777777777776664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.88  E-value=0.0026  Score=29.74  Aligned_cols=20  Identities=30%  Similarity=0.888  Sum_probs=9.1

Q ss_pred             cccCcCcccccCcHhHHHHH
Q psy12647        355 YPCTQCPGKFYSAYELRQHV  374 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~  374 (410)
                      |+|+-|...|.++..|+.||
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            44444444444444444443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.004  Score=33.32  Aligned_cols=28  Identities=21%  Similarity=0.497  Sum_probs=22.7

Q ss_pred             CCCCccc--CcCcccccCcHhHHHHHHhhc
Q psy12647        351 GSLSYPC--TQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       351 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      .++||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4788988  568899999888888887764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0049  Score=33.38  Aligned_cols=27  Identities=30%  Similarity=0.771  Sum_probs=23.5

Q ss_pred             CCCceecccccccccCchhHHHHHHHh
Q psy12647         85 HPKTFSCNSCGQTWLGYTSWKQHVAAC  111 (410)
Q Consensus        85 ~~~~~~C~~C~~~f~~~~~l~~H~~~~  111 (410)
                      |-+||.|..|++.|.-..++.+|...+
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhhh
Confidence            678999999999999999999997654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.40  E-value=0.0042  Score=29.11  Aligned_cols=22  Identities=32%  Similarity=0.718  Sum_probs=18.8

Q ss_pred             cccCcCcccccCcHhHHHHHHh
Q psy12647        355 YPCTQCPGKFYSAYELRQHVRQ  376 (410)
Q Consensus       355 ~~C~~C~~~f~~~~~l~~H~~~  376 (410)
                      |.|+.|-+.|+.+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6789999999999999888764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.0073  Score=33.97  Aligned_cols=26  Identities=42%  Similarity=0.600  Sum_probs=22.9

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhc
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHT  378 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~  378 (410)
                      ..|.|..|++.|++.+.|++|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999998875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.006  Score=31.94  Aligned_cols=19  Identities=37%  Similarity=0.578  Sum_probs=9.7

Q ss_pred             CccCChhhHHHHHHhhcCCC
Q psy12647        333 HMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       333 ~~f~~~~~l~~H~~~~H~~~  352 (410)
                      +.|.....|..|+ ++|+||
T Consensus        15 ~pf~a~YkLv~H~-R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHM-RRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHT-HHHHCC
T ss_pred             CcchhHHHHHHHH-hhcCCC
Confidence            3455555555555 455543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.0072  Score=31.63  Aligned_cols=24  Identities=38%  Similarity=0.635  Sum_probs=20.5

Q ss_pred             cCcCcccccCcHhHHHHHHhhcCC
Q psy12647        357 CTQCPGKFYSAYELRQHVRQHTDE  380 (410)
Q Consensus       357 C~~C~~~f~~~~~l~~H~~~h~~~  380 (410)
                      |+.=++.|.....|..|||+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            555567899999999999999986

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.71  E-value=0.0066  Score=29.70  Aligned_cols=27  Identities=37%  Similarity=0.683  Sum_probs=16.0

Q ss_pred             Cccccc--ccCccCChhhHHHHHHhhcCCC
Q psy12647        325 QYTCHM--CGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       325 ~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      ||-|.+  |.+.|.+...|.+|. ..|++|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs-~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHS-LTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHH-HHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhh-ccccCC
Confidence            444444  666666666666665 666553

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.012  Score=30.21  Aligned_cols=27  Identities=15%  Similarity=0.482  Sum_probs=21.0

Q ss_pred             CCcccCcCcccccCcHhHHHHHHhhcC
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  379 (410)
                      ..|.|+.|++.|+..+.+.+|-..-+|
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            357888888888888888888765544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.35  E-value=0.014  Score=27.99  Aligned_cols=24  Identities=29%  Similarity=0.650  Sum_probs=13.1

Q ss_pred             cccccccCccCChhhHHHHHHhhc
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      |+|+.|+-....++.|.-|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            455555555555555555554444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.16  E-value=0.016  Score=27.68  Aligned_cols=23  Identities=35%  Similarity=0.738  Sum_probs=19.7

Q ss_pred             CcccccccCccCChhhHHHHHHh
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLAR  347 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~  347 (410)
                      ||+|..||+.+-.+.+|..|-.+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999998643

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.74  E-value=0.019  Score=26.85  Aligned_cols=24  Identities=38%  Similarity=0.753  Sum_probs=20.2

Q ss_pred             cccccccCccCChhhHHHHHHhhc
Q psy12647        326 YTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      |.|+.|-+.|+.+.++..|++.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888889998888888887666

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.25  E-value=0.029  Score=26.93  Aligned_cols=24  Identities=29%  Similarity=0.650  Sum_probs=13.0

Q ss_pred             cccccccccccChhHHHHHHhhhc
Q psy12647        195 YTCHMCGHMFTCKRRLTQHLARLH  218 (410)
Q Consensus       195 ~~C~~C~~~f~~~~~l~~H~~~~H  218 (410)
                      |.|+.|+.....++.|.-|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            455555555555555555554444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.035  Score=26.74  Aligned_cols=25  Identities=28%  Similarity=0.477  Sum_probs=18.2

Q ss_pred             CcccccccCccCChhhHHHHHHhhcC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      |-+|+.|.++.++++.|.-|- ++|-
T Consensus         2 pekc~ecsyscsskaalrvh~-rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHE-RIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHH-GGGC
T ss_pred             CccCcccccccCcHHHHHHhh-cccc
Confidence            456777888888888888775 6663

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.063  Score=30.08  Aligned_cols=27  Identities=41%  Similarity=0.543  Sum_probs=22.9

Q ss_pred             CccccCCCCcccCCHHHHHHHHHHhcC
Q psy12647        222 LSYPCTQCPGKFYSAYELRQHVRQHTD  248 (410)
Q Consensus       222 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  248 (410)
                      ..|.|..|++.|.....|+.|...|.-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            357899999999999999999888753

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.072  Score=25.70  Aligned_cols=25  Identities=36%  Similarity=0.794  Sum_probs=18.3

Q ss_pred             ecCcccccccccChhHHHHHHhhCC
Q psy12647        168 VCNHMQCTRRFHSASLLARHVSTHA  192 (410)
Q Consensus       168 ~C~~~~C~~~f~~~~~l~~H~~~~~  192 (410)
                      .|++..|++.|.+.+.+..|+-+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            4666678888888888888876654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.59  E-value=0.089  Score=25.59  Aligned_cols=26  Identities=27%  Similarity=0.640  Sum_probs=20.4

Q ss_pred             CcccccccCccCChhhHHHHHHhhcC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      .|.|..|++...+...++.|+-..|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            47788888888888888888766664

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.72  E-value=0.081  Score=25.64  Aligned_cols=23  Identities=26%  Similarity=0.511  Sum_probs=15.9

Q ss_pred             ccCcccccccccChhhHHHHHHc
Q psy12647        299 VCNHMQCTRRFHSASLLARHVST  321 (410)
Q Consensus       299 ~C~~~~C~~~f~~~~~l~~H~~~  321 (410)
                      .|+.+.|++.|++.+.|..|.+-
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            35555788888877777777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.54  E-value=0.063  Score=27.20  Aligned_cols=22  Identities=27%  Similarity=0.464  Sum_probs=17.6

Q ss_pred             CCcccCcCcccccCcHhHHHHH
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHV  374 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~  374 (410)
                      ..|.|+-||..|...+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3478888888888888888874

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.27  E-value=0.089  Score=25.35  Aligned_cols=23  Identities=39%  Similarity=0.855  Sum_probs=12.3

Q ss_pred             cCcccccccccChhhHHHHHHcC
Q psy12647        300 CNHMQCTRRFHSASLLARHVSTH  322 (410)
Q Consensus       300 C~~~~C~~~f~~~~~l~~H~~~~  322 (410)
                      |+...|++.|.+.+.+.+|+-+|
T Consensus         4 CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGG
T ss_pred             CCcccHHHHhhchHHHHHHhhcc
Confidence            44445555555555555555443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.20  E-value=0.13  Score=25.95  Aligned_cols=20  Identities=30%  Similarity=0.710  Sum_probs=11.1

Q ss_pred             cccccccCccCChhhHHHHH
Q psy12647        326 YTCHMCGHMFTCKRRLTQHL  345 (410)
Q Consensus       326 ~~C~~C~~~f~~~~~l~~H~  345 (410)
                      |.|.-||..|++.+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            45555555555555555553

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.66  E-value=0.071  Score=27.28  Aligned_cols=25  Identities=24%  Similarity=0.650  Sum_probs=20.5

Q ss_pred             CcccccccCccCChhhHHHHHHhhcC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHT  350 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~  350 (410)
                      .|-|..|++.|..+..+.+|. ....
T Consensus         4 afvcskcgktftrrntm~rha-~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA-DNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH-HHCC
T ss_pred             eeeecccccchhcchHHHHHh-hhcC
Confidence            478999999999999999996 4433

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.62  E-value=0.012  Score=29.27  Aligned_cols=28  Identities=21%  Similarity=0.132  Sum_probs=25.3

Q ss_pred             HHHHHHHhhcCCCcHHHHHHHHhhhcCC
Q psy12647         11 ILMLMIMTRYSLPCVDFIQVHLRLHSGE   38 (410)
Q Consensus        11 ~~c~~~~c~~~~~~~~~l~~H~~~h~~~   38 (410)
                      |.|.+.+|+..|....-|..|+-.|+|+
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            6688899999999999999999999875

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.35  E-value=0.13  Score=26.34  Aligned_cols=26  Identities=15%  Similarity=0.401  Sum_probs=18.3

Q ss_pred             CCCcccCcCcccccCcHhHHHHHHhh
Q psy12647        352 SLSYPCTQCPGKFYSAYELRQHVRQH  377 (410)
Q Consensus       352 ~~~~~C~~C~~~f~~~~~l~~H~~~h  377 (410)
                      +..|.|.+|.+.++..+++-+|..+-
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhh
Confidence            44577777777777777777776543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.89  E-value=0.24  Score=27.53  Aligned_cols=26  Identities=19%  Similarity=0.393  Sum_probs=17.8

Q ss_pred             CCCCcccCcCcccccCcHhHHHHHHh
Q psy12647        351 GSLSYPCTQCPGKFYSAYELRQHVRQ  376 (410)
Q Consensus       351 ~~~~~~C~~C~~~f~~~~~l~~H~~~  376 (410)
                      .+.|-.|++|+....+..+|++|+..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            35566777777777777777777654

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.28  E-value=0.1  Score=28.17  Aligned_cols=9  Identities=22%  Similarity=0.497  Sum_probs=4.3

Q ss_pred             CCcccCcCc
Q psy12647        353 LSYPCTQCP  361 (410)
Q Consensus       353 ~~~~C~~C~  361 (410)
                      .|-.||+|+
T Consensus        19 ~P~~CPvCg   27 (37)
T d1nnqa2          19 APEYCPVCG   27 (37)
T ss_dssp             CCSBCTTTC
T ss_pred             CCCcCCCCC
Confidence            444455554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.02  E-value=0.28  Score=24.28  Aligned_cols=20  Identities=25%  Similarity=0.697  Sum_probs=10.1

Q ss_pred             CcccccCcHhHHHHHHhhcC
Q psy12647        360 CPGKFYSAYELRQHVRQHTD  379 (410)
Q Consensus       360 C~~~f~~~~~l~~H~~~h~~  379 (410)
                      |+..|+..-.|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            55555555555555555544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.72  E-value=0.081  Score=33.00  Aligned_cols=24  Identities=25%  Similarity=0.469  Sum_probs=17.6

Q ss_pred             CCcccCcCcccccCcHhHHHHHHh
Q psy12647        353 LSYPCTQCPGKFYSAYELRQHVRQ  376 (410)
Q Consensus       353 ~~~~C~~C~~~f~~~~~l~~H~~~  376 (410)
                      ..|.|..|++.|.+..+|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            347788888888888888877753

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.32  E-value=0.7  Score=22.34  Aligned_cols=20  Identities=30%  Similarity=0.811  Sum_probs=10.5

Q ss_pred             cccccccccccChhHHHHHH
Q psy12647        195 YTCHMCGHMFTCKRRLTQHL  214 (410)
Q Consensus       195 ~~C~~C~~~f~~~~~l~~H~  214 (410)
                      |.|..||+...+...+..|+
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            44555555555555555554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.44  E-value=0.16  Score=30.97  Aligned_cols=35  Identities=14%  Similarity=0.448  Sum_probs=23.9

Q ss_pred             ceeecCcccccccccChhHHHHHHhhCCCCcccccccc
Q psy12647        165 RRYVCNHMQCTRRFHSASLLARHVSTHAIQYTCHMCGH  202 (410)
Q Consensus       165 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~  202 (410)
                      ..|.|+  .|++.|++...+.- +......|.|..|+-
T Consensus        13 ~~y~Cp--~C~~~ys~Lda~~L-~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          13 ASFKCP--VCSSTFTDLEANQL-FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SEEECS--SSCCEEEHHHHHHH-EETTTTEEBCSSSCC
T ss_pred             CceECC--CCCCCcchhhHHHh-cCcCCCeEEecCCCC
Confidence            678888  88888887766544 333344677777764

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.57  E-value=0.47  Score=24.48  Aligned_cols=28  Identities=21%  Similarity=0.446  Sum_probs=22.4

Q ss_pred             CcccccccCccCChhhHHHHHHhhcCCC
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLHTGS  352 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  352 (410)
                      ...|.+|-++|.+.-.+++|+-.+|...
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnqn   30 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQN   30 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheecccc
Confidence            3578889999999999999987777543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.62  E-value=0.53  Score=24.05  Aligned_cols=25  Identities=24%  Similarity=0.700  Sum_probs=16.9

Q ss_pred             CcccccccCccCChhhHHHHHHhhc
Q psy12647        325 QYTCHMCGHMFTCKRRLTQHLARLH  349 (410)
Q Consensus       325 ~~~C~~C~~~f~~~~~l~~H~~~~H  349 (410)
                      .|+|.+|.++++.-+++-+|.-..|
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4677777777777777777764444

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=81.29  E-value=0.26  Score=26.32  Aligned_cols=9  Identities=22%  Similarity=0.272  Sum_probs=3.9

Q ss_pred             CCcccCcCc
Q psy12647        353 LSYPCTQCP  361 (410)
Q Consensus       353 ~~~~C~~C~  361 (410)
                      .|-+|++|+
T Consensus        19 ~Pe~CPvCg   27 (36)
T d1yuza2          19 DFEKCPICF   27 (36)
T ss_dssp             CCSBCTTTC
T ss_pred             CCCcCCCCC
Confidence            333444444

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=80.81  E-value=0.52  Score=22.78  Aligned_cols=22  Identities=23%  Similarity=0.692  Sum_probs=12.0

Q ss_pred             cccCcccccccccChhhHHHHH
Q psy12647        298 YVCNHMQCTRRFHSASLLARHV  319 (410)
Q Consensus       298 ~~C~~~~C~~~f~~~~~l~~H~  319 (410)
                      |.|+...|+..|.++.+++.|-
T Consensus         3 f~cdsd~cdl~fttkanmkkhf   24 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHF   24 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHH
Confidence            4455445555555555555553