Psyllid ID: psy12834

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
Protein Sequence
MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLLSQATPVFSMVI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccccccccccccEccccHHHHHHHHcccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEEEccccEccccccccEcccccccHHHHHHHHHccccccccccHcccccccccHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEcccccccEcccHHHHHHHHHHHHcccccccccHccccEEEcc
Coil and Loop (DISEMBL)
medhlvshtgarpyecktckktfvsKYTYKAHLvthtdrkrpfscekcdksfYTQQNlvqhekthsgskdfvCTECGKAFGTLRNLEVHLAVhtgnrpficrvcgksfvrkaevkdherthtgekpyqcefcgaqfrfkgssgteSIDKLLLCFLSQRSNlqshkrathfndkrypctscpkafkRRRLLDYHIKaahtgerpyqcdicnatfiypehfkkhrrihtgekpyVCEVRLAVFYYVTCLfnmiqpkrfrlgrphllsqatpVFSMVI
Flexible Loop (DISEMBL)
medhlvshtgarpyecktckktfvSKYTYKAHlvthtdrkrpfSCEKCDKSFYTQQNLVqhekthsgskdFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVkdherthtgekpyqcefCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHkrathfndkrypctscpkafkrRRLLDYHIKaahtgerpyqcdICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLgrphllsqatpvfsmvi
Low Complexity Region (SEG)
MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLLSQATPVFSMVI
Disordered region (IsUnstruct)
**********ARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNL***KRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLLS**********
Disordered Region (DISOPRED)
MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLLSQATPVFSMVI
Disordered Region (DISEMBL)
*********GARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLV********SKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLLSQATPVFSMVI
Disordered Region (DISPRO)
MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLLSQATPVFS*V*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLLSQATPVFSMVI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	275	2.2.26 [Sep-21-2011]
P51786	506	Zinc finger protein 157 O	yes	N/A	0.894	0.486	0.408	3e-48
A6NNF4	738	Zinc finger protein 726 O	no	N/A	0.909	0.338	0.386	5e-48
Q5RCD9	645	Zinc finger and SCAN doma	yes	N/A	0.821	0.350	0.421	1e-47
Q7Z7L9	614	Zinc finger and SCAN doma	no	N/A	0.821	0.368	0.421	2e-47
Q6ZMW2	699	Zinc finger protein 782 O	no	N/A	0.763	0.300	0.418	4e-47
Q07230	614	Zinc finger and SCAN doma	no	N/A	0.829	0.371	0.408	1e-46
P51523	738	Zinc finger protein 84 OS	no	N/A	0.818	0.304	0.400	1e-46
Q02525	718	Zinc finger protein 39 OS	no	N/A	0.789	0.302	0.422	1e-46
Q3ZCX4	644	Zinc finger protein 568 O	no	N/A	0.872	0.372	0.398	2e-46
A2VDQ7	687	Zinc finger protein 420 O	no	N/A	0.836	0.334	0.422	3e-46

>sp|P51786|ZN157_HUMAN Zinc finger protein 157 OS=Homo sapiens GN=ZNF157 PE=2 SV=2

 Score =  192 bits (487), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/272 (40%), Positives = 145/272 (53%), Gaps = 26/272 (9%)

Query: 3   DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHE 62
           +HL  HTG RPYEC  C KTF ++    AH  THT  +RPF C +C KSF  +  L+ H 
Sbjct: 179 EHLRIHTGERPYECGECAKTFSARSYLIAHQKTHTG-ERPFECNECGKSFGRKSQLILHT 237

Query: 63  KTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHT 122
           +TH+G + + CTECGK F     L +H   HTG +P+ C  CGK+F  K  +  H RTHT
Sbjct: 238 RTHTGERPYECTECGKTFSEKATLTIHQRTHTGEKPYECSECGKTFRVKISLTQHHRTHT 297

Query: 123 GEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPK 182
           GEKPY+C  CG  FR K S                   L  H+R  H  +K Y C  C K
Sbjct: 298 GEKPYECGECGKNFRAKKS-------------------LNQHQR-IHTGEKPYECGECGK 337

Query: 183 AFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFY 242
            F+ +  L+ H +  HTGE+PYQC+ C  +F        H+RIHTGEKPY C      FY
Sbjct: 338 FFRMKMTLNNHQR-THTGEKPYQCNECGKSFRVHSSLGIHQRIHTGEKPYECNECGNAFY 396

Query: 243 YVTCLFNMIQPKRFRLG-RPHLLSQATPVFSM 273
                  +I+ +R   G +P+  S+   +FSM
Sbjct: 397 VKA---RLIEHQRMHSGEKPYECSECGKIFSM 425

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|A6NNF4|ZN726_HUMAN Zinc finger protein 726 OS=Homo sapiens GN=ZNF726 PE=2 SV=3

 Score =  191 bits (485), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 146/274 (53%), Gaps = 24/274 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +  H + HTG +PY+C+ C K F+       H   HT R++P+ CE+C K+F     L  
Sbjct: 412 LTKHKIIHTGEKPYKCEECGKAFIWSSNLTEHKKIHT-REKPYKCEECSKAFSRSSALTT 470

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           H++ H+G K + C ECGKAF     L  H  +HTG +P+ C  CGK+F+  + +  H+R 
Sbjct: 471 HKRMHTGEKPYKCEECGKAFSQSSTLTAHKIIHTGEKPYKCEECGKAFILSSTLSKHKRI 530

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGEKPY+CE CG  F                   +Q SNL +HK   H  +K Y C  C
Sbjct: 531 HTGEKPYKCEECGKTF-------------------NQSSNLSTHK-IIHTGEKPYKCEEC 570

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAV 240
            KAF R   L  H K  HTGE+PY+CD C  +FI+     KH+ IHTGEKPY CE     
Sbjct: 571 GKAFNRSSNLSTH-KIIHTGEKPYKCDECGKSFIWSSTLFKHKIIHTGEKPYKCEECGKA 629

Query: 241 FYYVTCLFNMIQPKRFRLG-RPHLLSQATPVFSM 273
           F +   L + I+ KR   G +P+   +    F++
Sbjct: 630 FNHSQILLH-IRHKRMHTGEKPYKCEECGKSFNL 662

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5RCD9|ZSCA2_PONAB Zinc finger and SCAN domain-containing protein 2 OS=Pongo abelii GN=ZSCAN2 PE=2 SV=1

 Score =  189 bits (481), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 139/242 (57%), Gaps = 16/242 (6%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
           H  +HTG +PY+C+ C K+F        H   HT  K PF C +C KSF    NL+ H++
Sbjct: 299 HQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTGEK-PFQCAECGKSFSRSPNLIAHQR 357

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
           TH+G K + C ECGK+FG   +L  H  +HTG +P+ C+ CG+SF   + +  H+R HTG
Sbjct: 358 THTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYECKECGESFSYNSNLIRHQRIHTG 417

Query: 124 EKPYQCEFCGAQFRFKGSSG------TESIDKLLLCF-----LSQRSNLQSHKRATHFND 172
           EKPY+C  CG   RF  SS       T + +K   C       S+ SNL +H+R TH  +
Sbjct: 418 EKPYKCTDCGQ--RFSQSSALITHRRTHTGEKPYQCSECGKNFSRSSNLATHRR-THMVE 474

Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
           K Y C  C K+F +   L  H +  HTGE+PY+C  C  +F +  +  KH+RIHTGEKPY
Sbjct: 475 KPYKCGVCGKSFSQSSSLIAH-QGMHTGEKPYECLTCGESFSWSSNLLKHQRIHTGEKPY 533

Query: 233 VC 234
            C
Sbjct: 534 KC 535

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.

Pongo abelii (taxid: 9601)

>sp|Q7Z7L9|ZSCA2_HUMAN Zinc finger and SCAN domain-containing protein 2 OS=Homo sapiens GN=ZSCAN2 PE=2 SV=2

 Score =  189 bits (481), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 139/242 (57%), Gaps = 16/242 (6%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
           H  +HTG +PY+C+ C K+F        H   HT  K PF C +C KSF    NL+ H++
Sbjct: 268 HQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTGEK-PFQCAECGKSFSRSPNLIAHQR 326

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
           TH+G K + C ECGK+FG   +L  H  +HTG +P+ C+ CG+SF   + +  H+R HTG
Sbjct: 327 THTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYECKECGESFSYNSNLIRHQRIHTG 386

Query: 124 EKPYQCEFCGAQFRFKGSSG------TESIDKLLLC-----FLSQRSNLQSHKRATHFND 172
           EKPY+C  CG   RF  SS       T + +K   C       S+ SNL +H+R TH  +
Sbjct: 387 EKPYKCTDCGQ--RFSQSSALITHRRTHTGEKPYQCSECGKSFSRSSNLATHRR-THMVE 443

Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
           K Y C  C K+F +   L  H +  HTGE+PY+C  C  +F +  +  KH+RIHTGEKPY
Sbjct: 444 KPYKCGVCGKSFSQSSSLIAH-QGMHTGEKPYECLTCGESFSWSSNLLKHQRIHTGEKPY 502

Query: 233 VC 234
            C
Sbjct: 503 KC 504

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.

Homo sapiens (taxid: 9606)

>sp|Q6ZMW2|ZN782_HUMAN Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1

 Score =  188 bits (477), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 135/232 (58%), Gaps = 22/232 (9%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
           H  +HTG +P+EC  C K+F      + H  THT  +RP+ C++C K+F  +  L +H +
Sbjct: 468 HQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTG-ERPYKCDECGKAFKLKSGLRKHHR 526

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
           TH+G K + C +CGKAFG    L  H  +HTG +P+ C  CG++F +K+ ++ H RTHTG
Sbjct: 527 THTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTHTG 586

Query: 124 EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKA 183
           EKPYQCE CG  FR                   Q+SNL+ H+R TH  +K Y C  C KA
Sbjct: 587 EKPYQCEECGKTFR-------------------QKSNLRGHQR-THTGEKPYECNECGKA 626

Query: 184 FKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           F  + +L  H +  HTGE+PY C+ C   F    + + H+R HTGEKPY C+
Sbjct: 627 FSEKSVLRKHQR-THTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCD 677

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q07230|ZSCA2_MOUSE Zinc finger and SCAN domain-containing protein 2 OS=Mus musculus GN=Zscan2 PE=1 SV=1

 Score =  187 bits (474), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 137/240 (57%), Gaps = 12/240 (5%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
           H  +HTG +PY+C+ C K+F        H   HT  K PF C +C KSF    NL+ H++
Sbjct: 268 HQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTGEK-PFQCAECGKSFSRSPNLIAHQR 326

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
           TH+G K + C ECGK+FG   +L  H  +HTG +P+ C+ CG+SF   + +  H+R HTG
Sbjct: 327 THTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYACKECGESFSYNSNLIRHQRIHTG 386

Query: 124 EKPYQCEFCGAQFRFKGS----SGTESIDKLLLCF-----LSQRSNLQSHKRATHFNDKR 174
           EKPY+C  CG +F    +      T + +K   C       S+ SNL +H+R TH  +K 
Sbjct: 387 EKPYKCTECGQKFSQSSALITHRRTHTGEKPYQCGECGKNFSRSSNLATHRR-THLVEKP 445

Query: 175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
           Y C  C K+F +   L  H +  HTGE+PY+C  C  +F +  +  KH+R HTGEKPY C
Sbjct: 446 YKCGLCGKSFSQSSSLIAH-QGTHTGEKPYECLTCGESFSWSSNLIKHQRTHTGEKPYRC 504

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.

Mus musculus (taxid: 10090)

>sp|P51523|ZNF84_HUMAN Zinc finger protein 84 OS=Homo sapiens GN=ZNF84 PE=1 SV=2

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 139/247 (56%), Gaps = 22/247 (8%)

Query: 3   DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHE 62
           +H  +HTG +P+ C  C K F  K    +H +THT  K PF C KC K+F  +  LV+H+
Sbjct: 420 NHQRTHTGEKPHGCIQCGKAFSQKSHLISHQMTHTGEK-PFICSKCGKAFSRKSQLVRHQ 478

Query: 63  KTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHT 122
           +TH+G K + C+ECGKAF    +L  H  +HTG +P++C  CGK+F +K+ +  H+RTHT
Sbjct: 479 RTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQRTHT 538

Query: 123 GEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPK 182
           GEKPY+C  CG  F                    ++S+L +H+R TH  +K Y C  C K
Sbjct: 539 GEKPYECSECGKAF-------------------GEKSSLATHQR-THTGEKPYECRDCEK 578

Query: 183 AFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFY 242
           AF ++  L+ H +  HTGE+PY+C +C   F       +H R HTGEKPY C      F 
Sbjct: 579 AFSQKSQLNTH-QRIHTGEKPYECSLCRKAFFEKSELIRHLRTHTGEKPYECNECRKAFR 637

Query: 243 YVTCLFN 249
             + L N
Sbjct: 638 EKSSLIN 644

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q02525|ZFP39_MOUSE Zinc finger protein 39 OS=Mus musculus GN=Zfp39 PE=2 SV=2

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/239 (42%), Positives = 136/239 (56%), Gaps = 22/239 (9%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
           H  +HTG +PYECK C+KTF  K     H  THT  K P+ C++C K+FY++ +LV H+K
Sbjct: 455 HQRTHTGEKPYECKKCRKTFYCKSDLNVHHRTHTGEK-PYECDECRKTFYSKSHLVIHQK 513

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
            H+G K + C EC KAF    NL VH   HTG +P+ C VCGK+F R++ +  H+ THTG
Sbjct: 514 VHTGDKPYECEECQKAFSRKSNLTVHQKTHTGEKPYECNVCGKTFHRQSHLNMHQGTHTG 573

Query: 124 EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKA 183
           +KPYQCE CG  F                    Q+S+L+ H+R  H   + Y C  C K 
Sbjct: 574 QKPYQCEECGKAF-------------------YQKSSLRRHQR-NHTGSRPYACEECRKT 613

Query: 184 FKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFY 242
           F  +  L  H + +HTG +PY C+ C  TF    H   H+R HTGEKPY C++    F+
Sbjct: 614 FLHKSSLTVHQR-SHTGYKPYSCEECRKTFYSKSHLTVHQRTHTGEKPYECKLCKKAFH 671

A putative DNA-binding regulatory protein associated with meiosis in spermatogenesis.

Mus musculus (taxid: 10090)

>sp|Q3ZCX4|ZN568_HUMAN Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/266 (39%), Positives = 143/266 (53%), Gaps = 26/266 (9%)

Query: 8   HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
           HTG +PY CK C K F  K     H   HT  K P+ C++C KSF  +QNL++HEK H+G
Sbjct: 300 HTGEKPYACKDCWKAFSQKSNLIEHERIHTGEK-PYECKECGKSFSQKQNLIEHEKIHTG 358

Query: 68  SKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPY 127
            K + C ECG+AF  + ++ +H+  HTG +P+ C  CGK+F + +    H R+HTGEKPY
Sbjct: 359 EKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPY 418

Query: 128 QCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRR 187
            C  CG  F                   SQ S+L  H R  H  +K Y C  C KAF R+
Sbjct: 419 VCSECGKAF-------------------SQSSSLTVHMR-NHTAEKPYECKECGKAFSRK 458

Query: 188 RLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCL 247
             L  H K  HTGE+PY+C  C   FI   +  +H+RIHTGEKPY C V    F   +  
Sbjct: 459 ENLITHQK-IHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKS-- 515

Query: 248 FNMIQPKRFRLG-RPHLLSQATPVFS 272
            N+ + ++   G +P+  +Q    FS
Sbjct: 516 -NLTEHEKIHTGEKPYHCNQCGKAFS 540

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A2VDQ7|ZN420_BOVIN Zinc finger protein 420 OS=Bos taurus GN=ZNF420 PE=2 SV=1

 Score =  185 bits (469), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 138/244 (56%), Gaps = 14/244 (5%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +  H   HTG +PY+C+ C K F+       H   HT+ K P+ C++C K+F     L Q
Sbjct: 349 LMQHQRIHTGEKPYKCEECGKAFIRGSQLTQHQRIHTNEK-PYECKECGKTFSHGSQLTQ 407

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           H++ H+G K + C ECGKAF     L  H  +HTG +P+ C+ CGK+F R +E+  HER 
Sbjct: 408 HQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKPYECKECGKTFSRGSELTQHERI 467

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTE-----SIDKLLLC-----FLSQRSNLQSHKRATHF 170
           HTGEKPY+C+ CG  F  +GS  T+     + +K   C       +Q S+L  H+R  H 
Sbjct: 468 HTGEKPYECKECGKSF-IRGSQLTQHQRIHTGEKPYECKECRMAFTQSSHLSQHQR-LHT 525

Query: 171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
            +K Y C  C KAF R  LL  H +  HTGE+PYQC  C   FI      +H+RIHTGEK
Sbjct: 526 GEKPYVCNECGKAFARGLLLIQHQR-IHTGEKPYQCKECGKAFIRGSQLTQHQRIHTGEK 584

Query: 231 PYVC 234
           PY C
Sbjct: 585 PYGC 588

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
340709551	741	PREDICTED: zinc finger protein 845-like	0.789	0.292	0.677	8e-93
328712100	852	PREDICTED: zinc finger protein 12-like i	0.789	0.254	0.665	1e-91
332019403	724	Zinc finger protein 235 [Acromyrmex echi	0.789	0.299	0.669	5e-91
156553982	774	PREDICTED: zinc finger protein 235-like	0.789	0.280	0.665	1e-89
307190293	365	Zinc finger protein 569 [Camponotus flor	0.789	0.594	0.673	2e-89
242013882	833	gonadotropin inducible transcription fac	0.789	0.260	0.656	2e-88
189242420	767	PREDICTED: similar to zinc finger protei	0.789	0.282	0.635	2e-87
357602481	977	putative zinc finger protein 484 [Danaus	0.789	0.222	0.614	1e-84
157138482	538	zinc finger protein [Aedes aegypti] gi|1	0.789	0.403	0.588	1e-80
170030182	538	zinc finger protein 780B [Culex quinquef	0.789	0.403	0.576	4e-78

>gi|340709551|ref|XP_003393369.1| PREDICTED: zinc finger protein 845-like [Bombus terrestris]

 Score =  346 bits (887), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 160/236 (67%), Positives = 186/236 (78%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +E+H+ +HTG RPY C+ C K F SKYTYKAH+ TH  R RP+ C +C+K+F +QQNL Q
Sbjct: 310 LEEHINTHTGVRPYVCENCGKDFASKYTYKAHVKTHEIRPRPYQCSQCNKTFLSQQNLNQ 369

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HE+TH+G K++VC +CGKAFG+  NLEVH  VHTG +P+ICRVCGK+F RKAE++DHERT
Sbjct: 370 HERTHNGVKEYVCHQCGKAFGSPHNLEVHNIVHTGYKPYICRVCGKAFARKAEIRDHERT 429

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGEKPYQCEFCGA F                   SQRSNLQSHKRATH+NDKRY C  C
Sbjct: 430 HTGEKPYQCEFCGATF-------------------SQRSNLQSHKRATHYNDKRYKCDDC 470

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKRRRLLDYHIKAAHTGERPY+CDIC ATF+YPEHFKKH RIHTGEKPY+CEV
Sbjct: 471 GKGFKRRRLLDYHIKAAHTGERPYKCDICTATFVYPEHFKKHMRIHTGEKPYLCEV 526

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328712100|ref|XP_001946127.2| PREDICTED: zinc finger protein 12-like isoform 1 [Acyrthosiphon pisum] gi|328712102|ref|XP_003244731.1| PREDICTED: zinc finger protein 12-like isoform 2 [Acyrthosiphon pisum] gi|328712104|ref|XP_003244732.1| PREDICTED: zinc finger protein 12-like isoform 3 [Acyrthosiphon pisum]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 185/236 (78%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +E+H  +HTG RPY C+ C K F SKYT+KAH   HT+R+R F+C  C K+F T+QNL+ 
Sbjct: 390 LEEHNNTHTGVRPYRCEICGKDFTSKYTFKAHEKVHTNRERNFTCINCGKAFLTEQNLIH 449

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HE+THSG K++VC +CGKAFGT RNLEVH  VHTG +PFICR+CGK+F RKAE++DHER 
Sbjct: 450 HERTHSGLKNYVCQKCGKAFGTARNLEVHYVVHTGYKPFICRMCGKAFARKAEIRDHERI 509

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGEKPYQCEFCGA F                   SQRSNLQSHKRATH++DKRY CT C
Sbjct: 510 HTGEKPYQCEFCGATF-------------------SQRSNLQSHKRATHYDDKRYKCTDC 550

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKRRRLLDYH+KAAHTGERP++CD+C A+FIYPEHFKKH RIHTGEKPY+CEV
Sbjct: 551 GKGFKRRRLLDYHMKAAHTGERPFKCDVCQASFIYPEHFKKHARIHTGEKPYLCEV 606

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019403|gb|EGI59889.1| Zinc finger protein 235 [Acromyrmex echinatior]

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 158/236 (66%), Positives = 184/236 (77%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +E+H+ +HTG RPY C TC K F SKYTYKAH+ TH  R RPF C +C+K+F +QQNL Q
Sbjct: 303 LEEHINTHTGVRPYICDTCGKDFASKYTYKAHVKTHEVRPRPFECTQCNKTFLSQQNLNQ 362

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HE+TH+G+K+F+C +CGKAF +  NLEVH  VHTG +P+ C +CGKSF RKAE++DHERT
Sbjct: 363 HERTHNGTKEFICHQCGKAFTSAHNLEVHNIVHTGFKPYDCSICGKSFARKAEIRDHERT 422

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGEKPYQCEFCGA F                   SQRSNLQSHKRATH+NDKRY C  C
Sbjct: 423 HTGEKPYQCEFCGATF-------------------SQRSNLQSHKRATHYNDKRYKCDEC 463

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKR+RLLDYHIKAAHTGERPY+CDIC ATF+YPEHFKKH RIHTGEKPY+CEV
Sbjct: 464 GKGFKRKRLLDYHIKAAHTGERPYKCDICAATFVYPEHFKKHTRIHTGEKPYLCEV 519

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156553982|ref|XP_001603104.1| PREDICTED: zinc finger protein 235-like [Nasonia vitripennis]

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 181/236 (76%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +E+H  +HTG RPY C+ C K F SKYT++AH+ TH  R RPF C +C K+F +QQNL Q
Sbjct: 343 LEEHTNTHTGNRPYICEVCGKDFASKYTHRAHVKTHEVRPRPFECTQCSKTFLSQQNLTQ 402

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           H KTH+G K+ VC +CGKAFG+  NLEVH  VHTG +P+ICRVCGK+F RKAE++DHERT
Sbjct: 403 HVKTHNGVKEHVCHQCGKAFGSAHNLEVHNIVHTGYKPYICRVCGKAFARKAEIRDHERT 462

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGEKPYQCEFCGA F                   SQRSNLQSHKRATH+NDKRY C  C
Sbjct: 463 HTGEKPYQCEFCGATF-------------------SQRSNLQSHKRATHYNDKRYKCDEC 503

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKRRRLLDYHIKAAHTGERPY+C+ C ATF+YPEHFKKH RIHTGEKPY+CEV
Sbjct: 504 GKGFKRRRLLDYHIKAAHTGERPYKCETCTATFVYPEHFKKHMRIHTGEKPYLCEV 559

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307190293|gb|EFN74385.1| Zinc finger protein 569 [Camponotus floridanus]

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/236 (67%), Positives = 183/236 (77%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +++H+  H G RPY C+TC K F SKYTYKAH+ TH  R RPF C +CDK+F  QQNL Q
Sbjct: 107 LDEHMNIHMGVRPYVCETCNKDFASKYTYKAHVKTHEVRPRPFECTQCDKTFLNQQNLNQ 166

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HE+TH G K+ VC +CGKAFG+  NLEVH  VHTG +P+ICR+CGK+F RKAE++DHERT
Sbjct: 167 HERTHKGVKEHVCHQCGKAFGSHHNLEVHNIVHTGYKPYICRICGKAFARKAEIRDHERT 226

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGEKPYQCEFCGA F                   SQRSNLQSHKRATH+NDKRY C  C
Sbjct: 227 HTGEKPYQCEFCGATF-------------------SQRSNLQSHKRATHYNDKRYICDKC 267

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKRRRLLDYHIKAAHTGERPY+CD+C ATF+YPEHFKKHRRIHTGEKP++CEV
Sbjct: 268 QKGFKRRRLLDYHIKAAHTGERPYKCDVCTATFVYPEHFKKHRRIHTGEKPFLCEV 323

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013882|ref|XP_002427629.1| gonadotropin inducible transcription factor, putative [Pediculus humanus corporis] gi|212512050|gb|EEB14891.1| gonadotropin inducible transcription factor, putative [Pediculus humanus corporis]

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 155/236 (65%), Positives = 178/236 (75%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +E+H  +HTG RPY C  C K F SKYT+KAH  TH  R+R FSC  CDK+F + QNL+Q
Sbjct: 360 LEEHNNTHTGVRPYVCSNCGKDFASKYTFKAHKKTHEARERNFSCSACDKTFLSAQNLIQ 419

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HEKTHS SKD+VC  CGK FG+LRNLEVH  VH+G +PFIC VCGK+F RKAE+KDHERT
Sbjct: 420 HEKTHSESKDYVCDTCGKGFGSLRNLEVHSVVHSGFKPFICGVCGKAFARKAEIKDHERT 479

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGE+P+QCEFCGAQF                   SQRSNLQSHKR TH++D+RY C  C
Sbjct: 480 HTGERPFQCEFCGAQF-------------------SQRSNLQSHKRVTHYDDRRYRCEDC 520

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKRRRLLDYHIKA HTGERP++C  C+ATF+YPEHFKKH RIHTG KPY CEV
Sbjct: 521 GKGFKRRRLLDYHIKAVHTGERPFKCPTCDATFVYPEHFKKHIRIHTGIKPYKCEV 576

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189242420|ref|XP_001811279.1| PREDICTED: similar to zinc finger protein [Tribolium castaneum] gi|270016260|gb|EFA12706.1| hypothetical protein TcasGA2_TC002340 [Tribolium castaneum]

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/236 (63%), Positives = 181/236 (76%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +E+H+ +HTG RPY C+ C K F SKYT+KAH  TH  R RP++C +C KSF +QQNL+Q
Sbjct: 361 LEEHINTHTGVRPYVCQQCGKDFASKYTFKAHEKTHEVRPRPYACNQCPKSFLSQQNLIQ 420

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HE+TH+G K+F C  CGK FG+  NLEVH  VHTG RPF+C +C K+F RKAE++DHERT
Sbjct: 421 HERTHTGIKEFSCHLCGKRFGSAHNLEVHSIVHTGYRPFVCSICHKAFARKAEIRDHERT 480

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGE+PYQCE CGA F                   SQRSNLQSHKRATH +DKRY C  C
Sbjct: 481 HTGERPYQCEMCGATF-------------------SQRSNLQSHKRATHLDDKRYICVDC 521

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKRRRLLDYH+KAAHTGERP++C++C+ATF+YPEHFKKHRRIHTGEKP++CEV
Sbjct: 522 GKGFKRRRLLDYHMKAAHTGERPFKCNVCDATFVYPEHFKKHRRIHTGEKPFLCEV 577

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357602481|gb|EHJ63415.1| putative zinc finger protein 484 [Danaus plexippus]

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 145/236 (61%), Positives = 177/236 (75%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           + +H  +H+GA+PY C+TC K F SKYT+++HL TH  R RPF C +C KSF+T QNL Q
Sbjct: 577 LVEHRNTHSGAKPYVCRTCGKGFASKYTHQSHLKTHQARPRPFKCSQCGKSFFTLQNLNQ 636

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HEKTHSG KDF+C  CGKAFGT  NLEVH  VH+GN+PF+C VCGK+F R+AEV+DH R 
Sbjct: 637 HEKTHSGVKDFICNICGKAFGTQHNLEVHGVVHSGNKPFVCGVCGKAFARRAEVRDHMRI 696

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGE+P+ CE CGA+F                   +QRSNL SH+RATH +DKRY C  C
Sbjct: 697 HTGERPFACEICGARF-------------------TQRSNLHSHRRATHLDDKRYACQHC 737

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            K FKRRRLLDYH+KAAHTGERP +C++C ATF+YPEH+KKH RIH+GE+PY CEV
Sbjct: 738 SKRFKRRRLLDYHVKAAHTGERPLKCEVCRATFVYPEHYKKHTRIHSGERPYSCEV 793

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157138482|ref|XP_001657318.1| zinc finger protein [Aedes aegypti] gi|108880637|gb|EAT44862.1| AAEL003815-PA [Aedes aegypti]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 139/236 (58%), Positives = 172/236 (72%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +++H+  H+G RP++C  C K F SKYT  AH+  H DR+R +SC++C K FY+Q NL+Q
Sbjct: 120 LDEHMNMHSGKRPFKCSLCPKDFASKYTLTAHMKIHQDRERLYSCKECGKGFYSQNNLIQ 179

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HEK HSG +D+ C +CGK F +  NL++H  VH   +PFICR CGK F RKAE+KDHERT
Sbjct: 180 HEKIHSGVRDYRCPDCGKTFMSQHNLDIHKIVHLNYKPFICRTCGKGFARKAEIKDHERT 239

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGE+P+ C+ C A F                   SQRSNLQSHKRATHFNDKRY C  C
Sbjct: 240 HTGERPFVCDICDASF-------------------SQRSNLQSHKRATHFNDKRYKCDIC 280

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            + FKRRRLLDYHIKA HTGERPY+CD+C+ATF+YPEHFKKH++IHTG KP+ CEV
Sbjct: 281 SRCFKRRRLLDYHIKACHTGERPYKCDVCSATFVYPEHFKKHQKIHTGSKPFACEV 336

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170030182|ref|XP_001842969.1| zinc finger protein 780B [Culex quinquefasciatus] gi|167865975|gb|EDS29358.1| zinc finger protein 780B [Culex quinquefasciatus]

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 136/236 (57%), Positives = 169/236 (71%), Gaps = 19/236 (8%)

Query: 1   MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
           +++H   H+G RP++C  C K F SKYT  AH+  H DR+R F+C++C + FY+Q NL+Q
Sbjct: 119 LDEHSNMHSGKRPFKCPVCPKDFASKYTLSAHMKIHQDRERVFNCKECGRGFYSQHNLIQ 178

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
           HEK H G +D+ CT+C K F +  NL++H  VH   +PFICR CGK F RKAE+KDHERT
Sbjct: 179 HEKIHLGVRDYACTDCNKTFMSQHNLDIHKIVHLNYKPFICRTCGKGFARKAEIKDHERT 238

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
           HTGE+P+ C+ C A F                   SQRSNLQSHKRATHFNDKRY C  C
Sbjct: 239 HTGERPFVCDICDASF-------------------SQRSNLQSHKRATHFNDKRYKCDLC 279

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
            + FKRRRLLDYHIKA HTGERPY+C++C ATF+YPEHFKKH++IHTG KP+ CEV
Sbjct: 280 NRCFKRRRLLDYHIKACHTGERPYKCEVCAATFVYPEHFKKHQKIHTGSKPFACEV 335

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
UNIPROTKB|F1RX41	568	ZNF782 "Uncharacterized protei	0.84	0.406	0.442	1.1e-53
ZFIN|ZDB-GENE-110914-160	1003	si:dkey-240n22.7 "si:dkey-240n	0.843	0.231	0.418	3.1e-53
UNIPROTKB|J9NXK0	744	ZNF84 "Uncharacterized protein	0.952	0.352	0.399	4.9e-53
UNIPROTKB|F1RI76	738	F1RI76 "Uncharacterized protei	0.952	0.355	0.395	8e-53
ZFIN|ZDB-GENE-120214-29	518	si:ch73-367f21.5 "si:ch73-367f	0.832	0.442	0.4	1.7e-52
UNIPROTKB|F1LNE0	454	Zfp9 "Protein Zfp9" [Rattus no	0.832	0.504	0.431	1.7e-52
RGD|2293498	455	Zfp9 "zinc finger protein 9" [	0.832	0.503	0.431	1.7e-52
UNIPROTKB|J9NUM4	720	ZNF782 "Uncharacterized protei	0.84	0.320	0.423	2.1e-52
UNIPROTKB|F1MV59	460	LOC786724 "Uncharacterized pro	0.96	0.573	0.403	2.7e-52
UNIPROTKB|G3V1K9	567	ZNF782 "Zinc finger protein 78	0.84	0.407	0.423	5.6e-52

UNIPROTKB|F1RX41 ZNF782 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 107/242 (44%), Positives = 143/242 (59%)

Query:     1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
             +  H  +HTG +PY+C  C+KTF +K   + H   HT  K PF C +C KSF  +  L+ 
Sbjct:   279 LRKHQRTHTGEKPYKCDGCEKTFSAKSGLRIHQRIHTGEK-PFGCNECGKSFNYKSILIV 337

Query:    61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
             H++TH+G K F C+ECGK+F  L  L  H   HTG RP+ C  CGK+F  K+ +K H RT
Sbjct:   338 HQRTHTGEKPFECSECGKSFSHLSGLRNHQRTHTGERPYKCDECGKAFKLKSGLKKHHRT 397

Query:   121 HTGEKPYQCEFCGAQF----RFKGS----SGTESIDKLLLCFLSQRSNLQSHKRATHFND 172
             HTGEKPY+C  CG  F    + +G     +G   I+  L     Q+SNL+ H R TH  +
Sbjct:   398 HTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGKNPINVSLWRSFRQKSNLRVHHR-THTGE 456

Query:   173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
             K Y C  C K F+++  L  H +  HTGE+PY+C+ C   FI     +KH+RIHTGEKPY
Sbjct:   457 KPYKCDECGKTFRQKSNLRGH-QRTHTGEKPYECNECGKAFIERSVLRKHQRIHTGEKPY 515

Query:   233 VC 234
              C
Sbjct:   516 NC 517

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-160 si:dkey-240n22.7 "si:dkey-240n22.7" [Danio rerio (taxid:7955)]

 Score = 559 (201.8 bits), Expect = 3.1e-53, P = 3.1e-53
 Identities = 102/244 (41%), Positives = 147/244 (60%)

Query:     1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
             +E H + HTG +P+ C+ C K+F  K T K H+  HT  K PFSC  C K+F  +QNL+ 
Sbjct:    50 LEIHRIIHTGEKPFTCQQCGKSFSQKQTLKVHMRIHTGEK-PFSCHHCGKTFTDKQNLMV 108

Query:    61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
             H + H+G K ++CT CGK F    +L+VH+ +HTG +P+ C+ CGKSF RK  ++ H   
Sbjct:   109 HMRIHTGDKPYICTVCGKNFSQKPSLDVHVGIHTGEKPYQCQQCGKSFNRKQNLQVHMSI 168

Query:   121 HTGEKPYQCEFCGAQFRFKGSSGTE----SIDKLLLCF-----LSQRSNLQSHKRATHFN 171
             H+G+KPYQC+ CG  F  K +        + +K   C       SQ+ NL  H+R  H  
Sbjct:   169 HSGDKPYQCQQCGKSFNRKQNLQVHMRIHTGEKPFSCHQCGKSFSQKRNLAIHRRI-HTG 227

Query:   172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
             ++ Y C  C K+F +++ L  H++  HTG++PYQC  C  +FI  +H K H RIHTG+KP
Sbjct:   228 ERPYTCQQCGKSFTQKQNLKVHMRI-HTGDKPYQCQECGKSFIDKQHLKVHMRIHTGDKP 286

Query:   232 YVCE 235
             Y C+
Sbjct:   287 YQCQ 290

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|J9NXK0 ZNF84 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 111/278 (39%), Positives = 154/278 (55%)

Query:     4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
             H  +HTG +PY C  C+K F  K     H   HT  K P+ C +C K+F  + +L+ H++
Sbjct:   371 HHRTHTGTKPYGCSDCRKAFFEKSELIRHQTIHTGEK-PYECSECGKAFRERSSLINHQR 429

Query:    64 THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
             TH+G K  VC +CGKAF    +L  H   HTG +PF+C  CGK+F RK+++  H+RTHTG
Sbjct:   430 THTGEKPHVCIQCGKAFSQKSHLISHQMTHTGEKPFVCSKCGKAFSRKSQLVRHQRTHTG 489

Query:   124 EKPYQCEFCGAQFRFKGS-SGTESI---DKLLLCF-----LSQRSNLQSHKRATHFNDKR 174
             EKPY+C  CG  F  K S +  + I   +K  +C        Q+S+L SH+R TH  +K 
Sbjct:   490 EKPYECSECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQR-THTGEKP 548

Query:   175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             Y CT C KAF  +  L  H +  HTGE+PY C  C   F        H+RIHTGEKPY C
Sbjct:   549 YECTECGKAFGEKSSLATH-QRTHTGEKPYGCRDCEKAFSQKSQLNTHQRIHTGEKPYEC 607

Query:   235 EVRLAVFYYVTCLFNMIQPKRFRLG-RPHLLSQATPVF 271
              +    F+  +    +I+ +R   G +P+  S+    F
Sbjct:   608 SLCRKAFFEKS---ELIRHQRTHTGEKPYECSECGKAF 642

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RI76 F1RI76 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 110/278 (39%), Positives = 154/278 (55%)

Query:     4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
             H  +HTG +PY C  C+K F  K     H   HT  K P+ C +C K+F  + +L+ H++
Sbjct:   365 HHRTHTGTKPYGCSDCRKAFFEKSELVRHQTIHTGEK-PYECSECRKAFRERSSLINHQR 423

Query:    64 THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
             TH+G K   C +CGKAF    +L  H   HTG +PF+C  CGK+F RK+++  H+RTHTG
Sbjct:   424 THTGEKPHGCIQCGKAFSQKSHLLSHQMTHTGEKPFVCSKCGKAFSRKSQLVRHQRTHTG 483

Query:   124 EKPYQCEFCGAQFRFKGS-SGTESI---DKLLLCF-----LSQRSNLQSHKRATHFNDKR 174
             EKPY+C  CG  F  K S +  + I   +K  +C        Q+S+L SH+R TH  +K 
Sbjct:   484 EKPYECNECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQR-THTGEKP 542

Query:   175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             Y CT C KAF  +  L  H +  HTGE+PY+C  C   F        H+RIHTGEKPY C
Sbjct:   543 YECTECGKAFGEKSSLATH-QRTHTGEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYEC 601

Query:   235 EVRLAVFYYVTCLFNMIQPKRFRLG-RPHLLSQATPVF 271
              +    F+  +    +I+ +R   G +P+  S+    F
Sbjct:   602 GICQKAFFEKS---ELIRHQRTHTGEKPYECSECRKAF 636

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-120214-29 si:ch73-367f21.5 "si:ch73-367f21.5" [Danio rerio (taxid:7955)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 98/245 (40%), Positives = 149/245 (60%)

Query:     1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
             +E HL  HTG +PY C  C K+F  K   + H+  HT  K P++C++C KSF  +QNL +
Sbjct:   161 LEKHLTIHTGEKPYSCPECGKSFRVKNCLENHIKIHTGEK-PYTCQECGKSFTEKQNLKR 219

Query:    61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
             H + H+G K F C+ CGK+F   ++L++H+ +HTG +PF C+ CGKSF    ++  H R 
Sbjct:   220 HMRIHTGEKPFTCSHCGKSFRVSKDLKIHVRIHTGEKPFSCQQCGKSFSENKKLTSHMRI 279

Query:   121 HTGEKPYQCEFCGAQFRFKGSSGTESI------DKLLLC-----FLSQRSNLQSHKRATH 169
             HTGEKP+ C  CG   RF+G    ES       +K   C       +++ +L++H R+ H
Sbjct:   280 HTGEKPFVCSHCGK--RFRGKQNLESHIRLHTGEKRYTCPQCGKSYNEQKSLENHIRS-H 336

Query:   170 FNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGE 229
               +K + C  C K+F+++R+L  HI+  HTGE+P+ C  C  +FI     ++H++IH+GE
Sbjct:   337 TGEKPFACDQCGKSFRQQRILKGHIRI-HTGEKPFTCPQCGKSFIEKTKLERHKKIHSGE 395

Query:   230 KPYVC 234
             KPY C
Sbjct:   396 KPYTC 400

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1LNE0 Zfp9 "Protein Zfp9" [Rattus norvegicus (taxid:10116)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 104/241 (43%), Positives = 138/241 (57%)

Query:     4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
             HL  H G +PYEC  C+K+F  K     H  THT  K PF C++C K FY +  L+ H+K
Sbjct:   190 HLRIHAGEKPYECSQCEKSFYQKPHLTEHQKTHTGEK-PFECKECGKFFYVKAYLLVHQK 248

Query:    64 THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
             TH+G K F C ECGK F    +L VH   HTG +P+ C+ CGK F R + +  H+RTHTG
Sbjct:   249 THTGEKPFECKECGKFFSQKSHLTVHQRTHTGEKPYKCKECGKLFSRNSHLITHQRTHTG 308

Query:   124 EKPYQCEFCGAQFRFKGS----SGTESIDKLLLC-----FLSQRSNLQSHKRATHFNDKR 174
             EKPY+C+ CG +F  K +      T + +K   C         +S+L  H+R  H  +K 
Sbjct:   309 EKPYKCKECGNRFYQKSALTVHQRTHTGEKPFECSKCGKHFYYKSDLTKHERK-HTGEKP 367

Query:   175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             Y C  C K+F    +L  H +  HTGE+PY C+IC  +F    HF  H+R HTGEKPY C
Sbjct:   368 YECAECGKSFSVNSVLRLH-ERTHTGEKPYACEICGKSFSQKSHFVVHQRKHTGEKPYKC 426

Query:   235 E 235
             +
Sbjct:   427 Q 427

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|2293498 Zfp9 "zinc finger protein 9" [Rattus norvegicus (taxid:10116)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 104/241 (43%), Positives = 138/241 (57%)

Query:     4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
             HL  H G +PYEC  C+K+F  K     H  THT  K PF C++C K FY +  L+ H+K
Sbjct:   191 HLRIHAGEKPYECSQCEKSFYQKPHLTEHQKTHTGEK-PFECKECGKFFYVKAYLLVHQK 249

Query:    64 THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
             TH+G K F C ECGK F    +L VH   HTG +P+ C+ CGK F R + +  H+RTHTG
Sbjct:   250 THTGEKPFECKECGKFFSQKSHLTVHQRTHTGEKPYKCKECGKLFSRNSHLITHQRTHTG 309

Query:   124 EKPYQCEFCGAQFRFKGS----SGTESIDKLLLC-----FLSQRSNLQSHKRATHFNDKR 174
             EKPY+C+ CG +F  K +      T + +K   C         +S+L  H+R  H  +K 
Sbjct:   310 EKPYKCKECGNRFYQKSALTVHQRTHTGEKPFECSKCGKHFYYKSDLTKHERK-HTGEKP 368

Query:   175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             Y C  C K+F    +L  H +  HTGE+PY C+IC  +F    HF  H+R HTGEKPY C
Sbjct:   369 YECAECGKSFSVNSVLRLH-ERTHTGEKPYACEICGKSFSQKSHFVVHQRKHTGEKPYKC 427

Query:   235 E 235
             +
Sbjct:   428 Q 428

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9NUM4 ZNF782 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 103/243 (42%), Positives = 140/243 (57%)

Query:     1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
             +  H  +HTG +PY+C  C+K F +K   + H  THT  K P+ C +C KSF  +  L+ 
Sbjct:   430 LRKHQRTHTGEKPYKCDDCEKAFSAKSGLRIHQRTHTGEK-PYECNECGKSFNYKSILIV 488

Query:    61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
             H++TH+G K F C ECGK+F  +  L  H   HTG RP+ C  CGKSF  K+ ++ H RT
Sbjct:   489 HQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKSFKLKSGLRKHHRT 548

Query:   121 HTGEKPYQCEFCGAQF----RFKGSSGTESIDKLLLC-----FLSQRSNLQSHKRATHFN 171
             HTGEKPY+C  CG  F    + +G     + +K   C       SQ+SNL+ H R TH  
Sbjct:   549 HTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHR-THTG 607

Query:   172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
             +K Y C  C K F+++  L  H +  HTGE+PY+C+ C   F      +KH+R HTGEKP
Sbjct:   608 EKPYKCDDCGKTFRQKSNLRGH-QRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKP 666

Query:   232 YVC 234
             Y C
Sbjct:   667 YKC 669

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MV59 LOC786724 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 113/280 (40%), Positives = 153/280 (54%)

Query:     4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
             H  +HTG R +EC  C KT+  K     HL  HT  +RP+ C +C K+F  +  L+ H+K
Sbjct:   135 HKRTHTGERNFECNECGKTYCRKSNLIEHLRIHTG-ERPYKCGECAKTFSARSYLIAHQK 193

Query:    64 THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
             TH+G K F C ECGK+FG    L +H   HTG RP+ C  CGK+F  KA +  H+RTHTG
Sbjct:   194 THTGEKPFECDECGKSFGRKSQLILHQRTHTGERPYECTECGKTFSEKATLMIHQRTHTG 253

Query:   124 EKPYQCEFCGAQFRFKGS----SGTESIDKLLLCF-----LSQRSNLQSHKRATHFNDKR 174
             EKPY+C  CG  FR K S      T + +K   C         + +L  H+R  H  +K 
Sbjct:   254 EKPYECGECGKTFRVKISLTQHERTHTGEKPYECGACGKNFGAKKSLNQHQRI-HTGEKP 312

Query:   175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             Y C  C K F+ +  L+ H +  HTGE+PYQC+ C  +F        H+RIHTGEKPY C
Sbjct:   313 YKCGECGKFFRLKMTLNNH-QRTHTGEKPYQCNECGKSFSVHSSLGIHQRIHTGEKPYEC 371

Query:   235 EVRLAVFYYVTCLFNMIQPKRFRLG-RPHLLSQATPVFSM 273
               +    +YV     +I+ +R   G +P+  S    +FSM
Sbjct:   372 N-KCGNAFYVKA--RLIEHQRMHSGEKPYECSDCGKIFSM 408

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3V1K9 ZNF782 "Zinc finger protein 782" [Homo sapiens (taxid:9606)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 103/243 (42%), Positives = 139/243 (57%)

Query:     1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
             +  H  +HTG +PY+C  C K F +K   + H  THT  K PF C +C KSF  +  L+ 
Sbjct:   277 LRKHQRTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEK-PFECHECGKSFNYKSILIV 335

Query:    61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT 120
             H++TH+G K F C ECGK+F  +  L  H   HTG RP+ C  CGK+F  K+ ++ H RT
Sbjct:   336 HQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRT 395

Query:   121 HTGEKPYQCEFCGAQF----RFKGSSGTESIDKLLLC-----FLSQRSNLQSHKRATHFN 171
             HTGEKPY+C  CG  F    + +G     + +K   C       SQ+SNL+ H R TH  
Sbjct:   396 HTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHR-THTG 454

Query:   172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
             +K Y C  C K F+++  L  H +  HTGE+PY+C+ C   F      +KH+R HTGEKP
Sbjct:   455 EKPYQCEECGKTFRQKSNLRGH-QRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKP 513

Query:   232 YVC 234
             Y C
Sbjct:   514 YNC 516

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	275
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.004

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 33.5 bits (77), Expect = 0.004
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 85  NLEVHLAVHTGNRPFICRVCGKSFVR 110
           NL  H+  HTG +P+ C VCGKSF  
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	275
KOG3608|consensus	467		99.95
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.93
KOG3608|consensus	467		99.92
KOG2462|consensus	279		99.92
KOG3623|consensus	1007		99.91
KOG1074|consensus	958		99.9
KOG3623|consensus	1007		99.8
KOG3576|consensus	267		99.63
KOG3576|consensus	267		99.61
PLN03086	567	PRLI-interacting factor K; Provisional	99.27
PLN03086	567	PRLI-interacting factor K; Provisional	99.26
PHA00733	128	hypothetical protein	99.2
PHA00733	128	hypothetical protein	99.04
PHA02768	55	hypothetical protein; Provisional	98.98
KOG3993|consensus	500		98.93
KOG3993|consensus	500		98.84
PHA02768	55	hypothetical protein; Provisional	98.75
PHA00616	44	hypothetical protein	98.72
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.71
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.53
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.43
PHA00732	79	hypothetical protein	98.42
PHA00616	44	hypothetical protein	98.37
PHA00732	79	hypothetical protein	98.36
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.35
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.09
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.96
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.92
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.69
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.68
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.66
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.66
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.52
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.51
KOG1146|consensus	1406		97.36
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.28
smart00355	26	ZnF_C2H2 zinc finger.	97.13
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.09
PRK04860	160	hypothetical protein; Provisional	97.03
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.02
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.99
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.99
KOG2231|consensus	669		96.96
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.93
smart00355	26	ZnF_C2H2 zinc finger.	96.66
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.58
KOG2785|consensus	390		96.57
KOG2231|consensus	669		96.56
KOG2482|consensus	423		96.55
KOG2785|consensus	390		96.49
KOG1146|consensus	1406		96.35
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.33
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.1
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.91
KOG2482|consensus	423		95.66
PRK04860	160	hypothetical protein; Provisional	95.6
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.31
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.28
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.83
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.8
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	94.47
KOG4173|consensus	253		94.43
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.24
KOG2893|consensus	341		93.36
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.17
COG4049	65	Uncharacterized protein containing archaeal-type C	92.96
KOG2893|consensus	341		92.18
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.96
COG5048	467	FOG: Zn-finger [General function prediction only]	91.82
KOG4173|consensus	253		91.24
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	88.43
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	88.21
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.2
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	88.13
COG4049	65	Uncharacterized protein containing archaeal-type C	88.06
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	87.33
COG5048	467	FOG: Zn-finger [General function prediction only]	87.3
PF12907	40	zf-met2: Zinc-binding	86.58
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	85.45
KOG2186|consensus	276		84.1
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	84.1
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.98
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	83.69
KOG2186|consensus	276		83.63
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.61
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	82.98
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.76
KOG1280|consensus	381		82.66
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	82.51
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	82.5
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	82.19
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	81.83
PHA00626	59	hypothetical protein	81.52
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	80.91
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	80.51
COG1592	166	Rubrerythrin [Energy production and conversion]	80.04

>KOG3608|consensus

Probab=99.95  E-value=8.5e-28  Score=186.68  Aligned_cols=227  Identities=27%  Similarity=0.482  Sum_probs=199.9

Q ss_pred             ccCCCCceec--ccccccccCHHHHHHHHHhhcCC-----------C-CCccccc--chhhcccchHHHHHHhhhcCCCc
Q psy12834          7 SHTGARPYEC--KTCKKTFVSKYTYKAHLVTHTDR-----------K-RPFSCEK--CDKSFYTQQNLVQHEKTHSGSKD   70 (275)
Q Consensus         7 ~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~-----------~-~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~   70 (275)
                      +...+..|.|  ..|+..|.+...|..|+..|...           + ..+.|.+  |-+.+.+++.|..|.+.|.+++.
T Consensus       128 ip~~g~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKv  207 (467)
T KOG3608|consen  128 IPALGQNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKV  207 (467)
T ss_pred             cccchhhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeE
Confidence            3344567787  57999999999999999887542           2 2345655  99999999999999999999999


Q ss_pred             cccCcchhhcCChHHHHHHHHh--hcCCCCccCCcccccccChhHHHHHHhhccCCCCccccccccccccccCCCccccc
Q psy12834         71 FVCTECGKAFGTLRNLEVHLAV--HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESID  148 (275)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~--~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~  148 (275)
                      ..|+.|+..|..+..|-.|.+.  .....+|.|..|.+.|.+...|..|+..|.  ..|.|+.|+-..            
T Consensus       208 vACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc------------  273 (467)
T KOG3608|consen  208 VACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTC------------  273 (467)
T ss_pred             EecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCC------------
Confidence            9999999999999999999653  455779999999999999999999999886  559999999999            


Q ss_pred             ccccccccccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCccccc--ccccCCChhHHHHHHHhh
Q psy12834        149 KLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  226 (275)
                             +..+.|..|++..|...+||+|..|++.|.+.++|.+|+. .|+ +..|+|..  |..+|.+...|..|++.+
T Consensus       274 -------~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~ev  344 (467)
T KOG3608|consen  274 -------SSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEV  344 (467)
T ss_pred             -------CChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hcc-ccceecCCCCCcHHHHHHHHHHHHHHHh
Confidence                   8889999999999999999999999999999999999987 788 66799988  999999999999999876


Q ss_pred             c-CCC--ceeCcccchhhhhhhHHHhhhccccc
Q psy12834        227 T-GEK--PYVCEVRLAVFYYVTCLFNMIQPKRF  256 (275)
Q Consensus       227 ~-~~~--~~~C~~C~~~~~~~~~~~~H~~~~~~  256 (275)
                      + |.+  +|.|-.|++.|..=-+|..|+.++|.
T Consensus       345 hEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  345 HEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             ccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            5 544  59999999999999999999977654

>KOG1074|consensus

Probab=99.95  E-value=2.7e-28  Score=208.22  Aligned_cols=165  Identities=28%  Similarity=0.602  Sum_probs=126.8

Q ss_pred             cccCcchhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHHHHhhccCC----CCcccc---ccccccccccCCC
Q psy12834         71 FVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE----KPYQCE---FCGAQFRFKGSSG  143 (275)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~c~---~c~~~~~~~~~~~  143 (275)
                      .+|.+|.++...+..|+.|.+.|+|++||+|.+|++.|.++.+|..|+-.|...    ..+.|+   +|-+.|..     
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn-----  680 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTN-----  680 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccc-----
Confidence            789999999999999999999999999999999999999999999999988654    346788   89888842     


Q ss_pred             cccccccccccccccchHHHHHhhcCC-CC------------CCCCCCCChhhccChhhHHHHHHhhcCC----------
Q psy12834        144 TESIDKLLLCFLSQRSNLQSHKRATHF-ND------------KRYPCTSCPKAFKRRRLLDYHIKAAHTG----------  200 (275)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~h~~~~h~-~~------------~~~~C~~C~~~f~~~~~l~~H~~~~H~~----------  200 (275)
                                    .-.+..|++ .|. +.            ..-+|..|.+.|.....+..++- .|..          
T Consensus       681 --------------~V~lpQhIr-iH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~s-e~~~~~s~~~~~~~  744 (958)
T KOG1074|consen  681 --------------AVTLPQHIR-IHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQIS-EQPSPESEPDEQMD  744 (958)
T ss_pred             --------------cccccceEE-eecCCCCCCCcccccccchhcccchhhhcccccccchhhhh-ccCCcccCCccccc
Confidence                          233333333 221 00            11335555555555444444432 2210          


Q ss_pred             -------------------------------------------------------------C------------------
Q psy12834        201 -------------------------------------------------------------E------------------  201 (275)
Q Consensus       201 -------------------------------------------------------------~------------------  201 (275)
                                                                                   +                  
T Consensus       745 ~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~  824 (958)
T KOG1074|consen  745 ERTETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVN  824 (958)
T ss_pred             ccccccccccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccc
Confidence                                                                         0                  


Q ss_pred             -----------------------------------------------------CCcccccccccCCChhHHHHHHHhhcC
Q psy12834        202 -----------------------------------------------------RPYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       202 -----------------------------------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                                                                           ....|.+|++.|.+.++|..|++.|++
T Consensus       825 ~~pvl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg  904 (958)
T KOG1074|consen  825 MDPVLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTG  904 (958)
T ss_pred             cCchhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCC
Confidence                                                                 016899999999999999999999999


Q ss_pred             CCceeCcccchhhhhhhHHHhhhccccc
Q psy12834        229 EKPYVCEVRLAVFYYVTCLFNMIQPKRF  256 (275)
Q Consensus       229 ~~~~~C~~C~~~~~~~~~~~~H~~~~~~  256 (275)
                      ++||.|.+|++.|..+.+|+.||..|.-
T Consensus       905 ~KPF~C~fC~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  905 PKPFFCHFCEEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             CCCccchhhhhhhhhhhhhhhhhccccc
Confidence            9999999999999999999999986643

>KOG2462|consensus

Probab=99.93  E-value=4.7e-26  Score=172.46  Aligned_cols=137  Identities=30%  Similarity=0.607  Sum_probs=123.2

Q ss_pred             CCCccCCcccccccChhHHHHHHhhccC---CCCccccccccccccccCCCcccccccccccccccchHHHHHhhcCCCC
Q psy12834         96 NRPFICRVCGKSFVRKAEVKDHERTHTG---EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFND  172 (275)
Q Consensus        96 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~  172 (275)
                      ...|+|+.|++.+.+..+|.+|.+.|..   .+.+.|++|++.|                   .+...|..|++ .|+  
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~Y-------------------vSmpALkMHir-TH~--  185 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVY-------------------VSMPALKMHIR-THT--  185 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCcee-------------------eehHHHhhHhh-ccC--
Confidence            3458999999999999999999998864   5778999999999                   67788999998 464  


Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhc
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQ  252 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~  252 (275)
                      -+..|.+||+.|.....|.-|+| -|++++||.|+.|+++|.+.++|+-|+++|.+.+.|+|..|++.|...+-|..|..
T Consensus       186 l~c~C~iCGKaFSRPWLLQGHiR-THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  186 LPCECGICGKAFSRPWLLQGHIR-THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             CCcccccccccccchHHhhcccc-cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            67999999999999999999998 79999999999999999999999999999999999999999999999999999985


Q ss_pred             ccc
Q psy12834        253 PKR  255 (275)
Q Consensus       253 ~~~  255 (275)
                      .-.
T Consensus       265 S~C  267 (279)
T KOG2462|consen  265 SAC  267 (279)
T ss_pred             hcc
Confidence            433

>KOG3608|consensus

Probab=99.92  E-value=5.4e-25  Score=171.21  Aligned_cols=220  Identities=24%  Similarity=0.477  Sum_probs=188.8

Q ss_pred             ceec--ccccccccC-HHHHHHHHHhhcC---------------------------------CCCCccccc--chhhccc
Q psy12834         13 PYEC--KTCKKTFVS-KYTYKAHLVTHTD---------------------------------RKRPFSCEK--CDKSFYT   54 (275)
Q Consensus        13 ~~~C--~~C~~~f~~-~~~l~~H~~~~~~---------------------------------~~~~~~C~~--C~~~f~~   54 (275)
                      .+.|  ..||+...+ ...|..|+-.|--                                 ....|.|.+  |+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            5666  569988877 5788888744310                                 011266654  9999999


Q ss_pred             chHHHHHHhhhcC------------C-CccccCc--chhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHHHHh
Q psy12834         55 QQNLVQHEKTHSG------------S-KDFVCTE--CGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHER  119 (275)
Q Consensus        55 ~~~l~~H~~~~~~------------~-~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  119 (275)
                      ...+..|+..|.-            . ..+.|..  |.+.+.++..|++|.+.|.+++...|+.|+..|.++..|..|++
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            9999999877631            1 2245654  99999999999999999999999999999999999999999988


Q ss_pred             hcc--CCCCccccccccccccccCCCcccccccccccccccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhh
Q psy12834        120 THT--GEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAA  197 (275)
Q Consensus       120 ~~~--~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  197 (275)
                      ..+  ..++|.|..|.+.|                   .+...|..|+. .|.+  .|+|+.|+.+.+..++|..|++..
T Consensus       229 Rqt~l~~n~fqC~~C~KrF-------------------aTeklL~~Hv~-rHvn--~ykCplCdmtc~~~ssL~~H~r~r  286 (467)
T KOG3608|consen  229 RQTELNTNSFQCAQCFKRF-------------------ATEKLLKSHVV-RHVN--CYKCPLCDMTCSSASSLTTHIRYR  286 (467)
T ss_pred             hhhhhcCCchHHHHHHHHH-------------------hHHHHHHHHHH-Hhhh--cccccccccCCCChHHHHHHHHhh
Confidence            654  46799999999999                   78888899987 5655  499999999999999999999999


Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc--cchhhhhhhHHHhhhcccc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV--RLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~~~~~~~~~~H~~~~~  255 (275)
                      |+.++||+|..|++.|.+.+.|..|+..|+ +..|.|..  |.++|.++-+++.|++.++
T Consensus       287 Hs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  287 HSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             hccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999998 77899999  9999999999999998776

>KOG2462|consensus

Probab=99.92  E-value=4.5e-26  Score=172.59  Aligned_cols=136  Identities=35%  Similarity=0.701  Sum_probs=127.5

Q ss_pred             CCCceecccccccccCHHHHHHHHHhhcC--CCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHH
Q psy12834         10 GARPYECKTCKKTFVSKYTYKAHLVTHTD--RKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLE   87 (275)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~--~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~   87 (275)
                      ....|.|+.||+.|.+...|-+|...|-.  ..+.+.|++|++.|.+...|.+|+++|.  -+..|.+||+.|...|-|+
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhh
Confidence            45689999999999999999999998864  3568999999999999999999999985  5789999999999999999


Q ss_pred             HHHHhhcCCCCccCCcccccccChhHHHHHHhhccCCCCccccccccccccccCCCcccccccccccccccchHHHHHh
Q psy12834         88 VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKR  166 (275)
Q Consensus        88 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  166 (275)
                      -|++.|+|++||.|+.|++.|.++++|+.|+++|.+.+.|.|..|++.|                   ...+-|+.|..
T Consensus       205 GHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsF-------------------sl~SyLnKH~E  264 (279)
T KOG2462|consen  205 GHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSF-------------------ALKSYLNKHSE  264 (279)
T ss_pred             cccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHH-------------------HHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999                   77788888887

>KOG3623|consensus

Probab=99.91  E-value=2.9e-25  Score=187.07  Aligned_cols=80  Identities=38%  Similarity=0.782  Sum_probs=76.4

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhh
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMI  251 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~  251 (275)
                      +..|.|..|+++|...+.|.+|-. .|++++||+|.+|.++|..+-.|..|.|.|.||+||+|+.|++.|....+.-+||
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKY-EHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKY-EHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhh-hhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            456999999999999999999965 9999999999999999999999999999999999999999999999999999999


Q ss_pred             c
Q psy12834        252 Q  252 (275)
Q Consensus       252 ~  252 (275)
                      -
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            4

>KOG1074|consensus

Probab=99.90  E-value=6.8e-25  Score=187.65  Aligned_cols=188  Identities=29%  Similarity=0.534  Sum_probs=138.1

Q ss_pred             cccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHhhcCC----CCccCC---cccccccChhHHH
Q psy12834         43 FSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGN----RPFICR---VCGKSFVRKAEVK  115 (275)
Q Consensus        43 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~---~C~~~f~~~~~l~  115 (275)
                      -+|-+|-++...++.|++|++.|.+++||+|.+|++.|..+.+|+.||..|...    ..+.|+   +|-+.|.+.-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            689999999999999999999999999999999999999999999999888654    568999   9999999999999


Q ss_pred             HHHhhccCC-C------------CccccccccccccccCCC----------------cccccccccc-------------
Q psy12834        116 DHERTHTGE-K------------PYQCEFCGAQFRFKGSSG----------------TESIDKLLLC-------------  153 (275)
Q Consensus       116 ~H~~~~~~~-~------------~~~c~~c~~~~~~~~~~~----------------~~~~~~~~~~-------------  153 (275)
                      .|++.|.+. .            .-.|..|.+.|.-.....                .+..++....             
T Consensus       686 QhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~  765 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGR  765 (958)
T ss_pred             ceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccc
Confidence            999998732 1            134666666552100000                0000000000             


Q ss_pred             ----------------------------------------c-ccccc---------------hHHHHHhhcCCC------
Q psy12834        154 ----------------------------------------F-LSQRS---------------NLQSHKRATHFN------  171 (275)
Q Consensus       154 ----------------------------------------~-~~~~~---------------~~~~h~~~~h~~------  171 (275)
                                                              . ....+               .+..-.. ...+      
T Consensus       766 ~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~-~~l~eg~~t~  844 (958)
T KOG1074|consen  766 ELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQET-SMLNEGLATK  844 (958)
T ss_pred             ccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccc-cccccccccc
Confidence                                                    0 00000               0000000 0000      


Q ss_pred             --------------------------------CCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHH
Q psy12834        172 --------------------------------DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHF  219 (275)
Q Consensus       172 --------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  219 (275)
                                                      .....|..|++.|...++|..|++ -|++++||.|.+|++.|....+|
T Consensus       845 ~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~r-THtg~KPF~C~fC~~aFttrgnL  923 (958)
T KOG1074|consen  845 TNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMR-THTGPKPFFCHFCEEAFTTRGNL  923 (958)
T ss_pred             cccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhh-cCCCCCCccchhhhhhhhhhhhh
Confidence                                            012669999999999999999999 69999999999999999999999


Q ss_pred             HHHHHhhcCCCce
Q psy12834        220 KKHRRIHTGEKPY  232 (275)
Q Consensus       220 ~~H~~~h~~~~~~  232 (275)
                      ..||..|++.++.
T Consensus       924 KvHMgtH~w~q~~  936 (958)
T KOG1074|consen  924 KVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhccccccCCC
Confidence            9999999988764

>KOG3623|consensus

Probab=99.80  E-value=4.2e-20  Score=156.31  Aligned_cols=68  Identities=35%  Similarity=0.710  Sum_probs=64.3

Q ss_pred             cccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHh
Q psy12834        156 SQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       156 ~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      ...+.|.+|.- .|+|++||+|.+|.++|...--|..|.| .|++++||+|..|++.|+..++.-+||+-
T Consensus       905 qKqSSLaRHKY-EHsGqRPyqC~iCkKAFKHKHHLtEHkR-LHSGEKPfQCdKClKRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  905 QKQSSLARHKY-EHSGQRPYQCIICKKAFKHKHHLTEHKR-LHSGEKPFQCDKCLKRFSHSGSYSQHMNH  972 (1007)
T ss_pred             HhhHHHHHhhh-hhcCCCCcccchhhHhhhhhhhhhhhhh-hccCCCcchhhhhhhhcccccchHhhhcc
Confidence            67789999987 8999999999999999999999999987 99999999999999999999999999864

>KOG3576|consensus

Probab=99.63  E-value=1.3e-16  Score=115.49  Aligned_cols=117  Identities=29%  Similarity=0.571  Sum_probs=104.0

Q ss_pred             CCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHH
Q psy12834          9 TGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEV   88 (275)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~   88 (275)
                      +++..|.|.+|++.|.....|..|++-|.+ .+.+.|..|++.|.+.-+|.+|++.|.+.+||+|..|++.|..+-+|..
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~-vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSD-VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccH-HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            456789999999999999999999998885 6789999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC-----------CCCccCCcccccccChhHHHHHHhhccCCCC
Q psy12834         89 HLAVHTG-----------NRPFICRVCGKSFVRKAEVKDHERTHTGEKP  126 (275)
Q Consensus        89 H~~~~~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  126 (275)
                      |.+..++           .+.|.|..|++.......+..|+..++..-+
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            9876665           3669999999999989999999998875543

>KOG3576|consensus

Probab=99.61  E-value=2.9e-16  Score=113.74  Aligned_cols=114  Identities=35%  Similarity=0.667  Sum_probs=70.7

Q ss_pred             CCccCCcccccccChhHHHHHHhhccCCCCccccccccccccccCCCcccccccccccccccchHHHHHhhcCCCCCCCC
Q psy12834         97 RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP  176 (275)
Q Consensus        97 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~  176 (275)
                      ..|.|.+|++.|.-..-|.+|++-|...+.+.|..||+.|                   .+.-.|.+|.+ .|++-+||+
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgf-------------------ndtfdlkrh~r-thtgvrpyk  175 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGF-------------------NDTFDLKRHTR-THTGVRPYK  175 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcc-------------------cchhhhhhhhc-cccCccccc
Confidence            3466666666666666666666666666666666666666                   45556666666 566666666


Q ss_pred             CCCChhhccChhhHHHHHHhhcCC----------CCCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        177 CTSCPKAFKRRRLLDYHIKAAHTG----------ERPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       177 C~~C~~~f~~~~~l~~H~~~~H~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      |..|+++|.....|..|++.+|..          ++.|.|..||.+-.....+..|+..|+...
T Consensus       176 c~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  176 CSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             hhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            666666666666666666666653          234566666666666666666665555443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.27  E-value=1.2e-11  Score=105.92  Aligned_cols=158  Identities=23%  Similarity=0.533  Sum_probs=99.5

Q ss_pred             CceecccccccccCHHHHHHHHHhhcCCCCCccccc--chhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHH
Q psy12834         12 RPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK--CDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVH   89 (275)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H   89 (275)
                      ..-.|+.|+..... ..|..|.....  ...-.|+.  |+..|.. ..+..         .+.|+.|++.|. ...|..|
T Consensus       406 ~~V~C~NC~~~i~l-~~l~lHe~~C~--r~~V~Cp~~~Cg~v~~r-~el~~---------H~~C~~Cgk~f~-~s~LekH  471 (567)
T PLN03086        406 DTVECRNCKHYIPS-RSIALHEAYCS--RHNVVCPHDGCGIVLRV-EEAKN---------HVHCEKCGQAFQ-QGEMEKH  471 (567)
T ss_pred             CeEECCCCCCccch-hHHHHHHhhCC--CcceeCCcccccceeec-ccccc---------CccCCCCCCccc-hHHHHHH
Confidence            34568888776554 46667776554  23456774  7777632 22222         257888888875 5678888


Q ss_pred             HHhhcCCCCccCCcccccccChhHHHHHHhhccCCCCccccccccccccccCCCcccccccccccccccchHHHHHhhcC
Q psy12834         90 LAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH  169 (275)
Q Consensus        90 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h  169 (275)
                      +..++  .++.|+ |+..+ .+..|..|+..+.+.+++.|+.|++.+....+ ..+..        ...+.|..|...  
T Consensus       472 ~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~-~~d~~--------d~~s~Lt~HE~~--  536 (567)
T PLN03086        472 MKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGS-AMDVR--------DRLRGMSEHESI--  536 (567)
T ss_pred             HHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCcc-ccchh--------hhhhhHHHHHHh--
Confidence            88765  678888 88644 56778888888888888888888887731111 00000        123567777762  


Q ss_pred             CCCCCCCCCCChhhccChhhHHHHHHhhcC
Q psy12834        170 FNDKRYPCTSCPKAFKRRRLLDYHIKAAHT  199 (275)
Q Consensus       170 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  199 (275)
                      -+.+++.|..||+.+.. .+|..|+..+|.
T Consensus       537 CG~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        537 CGSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             cCCcceEccccCCeeee-hhHHHHHHHhhc
Confidence            37777777777766654 456667666654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.26  E-value=1.1e-11  Score=106.08  Aligned_cols=143  Identities=20%  Similarity=0.417  Sum_probs=107.6

Q ss_pred             cccCcchhhcCChHHHHHHHHhhcCCCCccCCc--ccccccChhHHHHHHhhccCCCCccccccccccccccCCCccccc
Q psy12834         71 FVCTECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESID  148 (275)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~  148 (275)
                      ..|+.|...... ..|..|... .......|+.  |+..|. +..+..|         +.|+.|+..|            
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~-C~r~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f------------  463 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAY-CSRHNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAF------------  463 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhh-CCCcceeCCcccccceee-ccccccC---------ccCCCCCCcc------------
Confidence            478888876554 667788754 3445567874  888774 2233333         5899999998            


Q ss_pred             ccccccccccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCC----------ChhH
Q psy12834        149 KLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFI----------YPEH  218 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~----------~~~~  218 (275)
                             . .+.+..|....|   .++.|+ |++.+ ....|..|+. .|...+++.|+.|++.|.          ....
T Consensus       464 -------~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~-thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~  529 (567)
T PLN03086        464 -------Q-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQA-STCPLRLITCRFCGDMVQAGGSAMDVRDRLRG  529 (567)
T ss_pred             -------c-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhh-ccCCCCceeCCCCCCccccCccccchhhhhhh
Confidence                   4 466889988544   789999 99755 6689999975 788899999999999995          2458


Q ss_pred             HHHHHHhhcCCCceeCcccchhhhhhhHHHhhhcc
Q psy12834        219 FKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQP  253 (275)
Q Consensus       219 l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~  253 (275)
                      |..|.... +.+++.|..||+.+..+ ++..|+..
T Consensus       530 Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        530 MSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             HHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHH
Confidence            99998885 89999999999998554 45577643

>PHA00733 hypothetical protein

Probab=99.20  E-value=9e-12  Score=87.26  Aligned_cols=95  Identities=21%  Similarity=0.280  Sum_probs=75.9

Q ss_pred             chHHHHHhhcCCCCCCCCCCCChhhccChhhHHHH--HHh--hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        159 SNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYH--IKA--AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       159 ~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H--~~~--~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      +.+.++-. ....++++.|.+|+..|.+...|..+  +..  .+...+||.|+.|++.|.+...|..|++.|  ..+|.|
T Consensus        26 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C  102 (128)
T PHA00733         26 EELKRYHS-LTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVC  102 (128)
T ss_pred             HHhhhhhc-CChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccC
Confidence            34444433 45567889999999999887777665  221  334578999999999999999999999977  457999


Q ss_pred             cccchhhhhhhHHHhhhccccc
Q psy12834        235 EVRLAVFYYVTCLFNMIQPKRF  256 (275)
Q Consensus       235 ~~C~~~~~~~~~~~~H~~~~~~  256 (275)
                      ..|++.|...+.|..|+..+|.
T Consensus       103 ~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        103 PVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCHHHHHHHHHHhcC
Confidence            9999999999999999987764

>PHA00733 hypothetical protein

Probab=99.04  E-value=2.1e-10  Score=80.36  Aligned_cols=82  Identities=22%  Similarity=0.380  Sum_probs=55.0

Q ss_pred             CCCcccccchhhcccchHHHHH--Hh---hhcCCCccccCcchhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHH
Q psy12834         40 KRPFSCEKCDKSFYTQQNLVQH--EK---THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEV  114 (275)
Q Consensus        40 ~~~~~C~~C~~~f~~~~~l~~H--~~---~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l  114 (275)
                      .+++.|.+|...|.....|..+  +.   ..++.++|.|+.|++.|.+...|..|+..+  ..+|.|..|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            3456677777666665555544  11   223456777888888887777777777754  3467788888888887778


Q ss_pred             HHHHhhccC
Q psy12834        115 KDHERTHTG  123 (275)
Q Consensus       115 ~~H~~~~~~  123 (275)
                      ..|+...++
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            777776654

>PHA02768 hypothetical protein; Provisional

Probab=98.98  E-value=1.8e-10  Score=66.29  Aligned_cols=42  Identities=19%  Similarity=0.309  Sum_probs=29.6

Q ss_pred             cccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHH
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCL  247 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~  247 (275)
                      |+|+.||+.|+..++|..|+++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            677777777777777777777777  567777777777655554

>KOG3993|consensus

Probab=98.93  E-value=1.7e-10  Score=93.13  Aligned_cols=185  Identities=18%  Similarity=0.211  Sum_probs=121.6

Q ss_pred             ccccCcchhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHHHHhhccCCCCccccccccccccccCCCcccccc
Q psy12834         70 DFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDK  149 (275)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~  149 (275)
                      .|.|..|...|.+...|..|.-.---...|+|+.|++.|.-..+|..|.+.|-....-     ++.-......+....++
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~ea-----a~a~~~P~k~~~~~rae  341 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEA-----AKAGSPPPKQAVETRAE  341 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhh-----hhcCCCChhhhhhhhhh
Confidence            3788888888888888888853333344688999999999889999998877532210     00000000000000011


Q ss_pred             cccccccccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCC---------------------------
Q psy12834        150 LLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGER---------------------------  202 (275)
Q Consensus       150 ~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~---------------------------  202 (275)
                      +......          ..-..+.-|.|..|++.|.....|+.|+.++|....                           
T Consensus       342 ~~ea~rs----------g~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~  411 (500)
T KOG3993|consen  342 VQEAERS----------GDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHS  411 (500)
T ss_pred             hhhcccc----------CCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhccccccccccccccc
Confidence            1111100          011234479999999999999999999876664321                           


Q ss_pred             ------------------CcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhcccccccCCcccc
Q psy12834        203 ------------------PYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRLGRPHLL  264 (275)
Q Consensus       203 ------------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~~~~~~~~~~  264 (275)
                                        ...|+.|+..++++..---+.+.-..++.|-|.+|.-.|.+...|..|++.-|...-+-+++
T Consensus       412 ~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse~rqv~l  491 (500)
T KOG3993|consen  412 SASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSELRQVAL  491 (500)
T ss_pred             ccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHHhhhhHH
Confidence                              14677888777777766666666666778999999999999999999998777766666666


Q ss_pred             ccccc
Q psy12834        265 SQATP  269 (275)
Q Consensus       265 ~~~~~  269 (275)
                      -+.++
T Consensus       492 lqmp~  496 (500)
T KOG3993|consen  492 LQMPP  496 (500)
T ss_pred             hcCCC
Confidence            55443

>KOG3993|consensus

Probab=98.84  E-value=7.2e-10  Score=89.54  Aligned_cols=110  Identities=25%  Similarity=0.480  Sum_probs=70.5

Q ss_pred             CceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccc---cCcchhhcCChHHHHH
Q psy12834         12 RPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFV---CTECGKAFGTLRNLEV   88 (275)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~---C~~C~~~f~~~~~l~~   88 (275)
                      +.|.|..|...|.+.-.|..|.-...- -.-|+|++|+++|....+|..|.++|-...---   =+-=.+........+.
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV-~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIV-HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeE-EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            469999999999999999999754332 125999999999999999999999984321100   0000000000000100


Q ss_pred             HHH--hhcCCCCccCCcccccccChhHHHHHHhhcc
Q psy12834         89 HLA--VHTGNRPFICRVCGKSFVRKAEVKDHERTHT  122 (275)
Q Consensus        89 H~~--~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  122 (275)
                      -.+  .-..+..|.|..|++.|....-|++|+..|+
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence            000  0023456888888888888888888877665

>PHA02768 hypothetical protein; Provisional

Probab=98.75  E-value=4.2e-09  Score=60.70  Aligned_cols=44  Identities=16%  Similarity=0.461  Sum_probs=38.9

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHH
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFK  220 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  220 (275)
                      .|+|+.||+.|...+.|..|+++ |.  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~-H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRK-HN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHh-cC--CcccCCcccceecccceeE
Confidence            48999999999999999999995 65  6899999999999776653

>PHA00616 hypothetical protein

Probab=98.72  E-value=5.3e-09  Score=57.27  Aligned_cols=34  Identities=21%  Similarity=0.266  Sum_probs=25.3

Q ss_pred             CcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      ||+|+.||+.|...+.|..|++.|++++++.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5777777777777777777777777777777664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.71  E-value=5.9e-09  Score=51.34  Aligned_cols=25  Identities=44%  Similarity=0.794  Sum_probs=17.9

Q ss_pred             HHHHHHHhhcCCCceeCcccchhhh
Q psy12834        218 HFKKHRRIHTGEKPYVCEVRLAVFY  242 (275)
Q Consensus       218 ~l~~H~~~h~~~~~~~C~~C~~~~~  242 (275)
                      +|..|+++|++++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4667777777777777777777764

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.53  E-value=1.9e-07  Score=55.10  Aligned_cols=51  Identities=22%  Similarity=0.443  Sum_probs=34.3

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCC-CCcccccccccCCChhHHHHHHHhhc
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGE-RPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      .|.||+|++ ..+...|..|+...|..+ +.+.||+|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            467788887 455677777877777664 3577777776543  37777776654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.43  E-value=1.3e-07  Score=46.49  Aligned_cols=26  Identities=42%  Similarity=0.972  Sum_probs=21.3

Q ss_pred             hHHHHHHhhcCCCCCcccccccccCCC
Q psy12834        189 LLDYHIKAAHTGERPYQCDICNATFIY  215 (275)
Q Consensus       189 ~l~~H~~~~H~~~~~~~C~~C~~~f~~  215 (275)
                      +|..|++ .|++++||+|+.|++.|.+
T Consensus         1 ~l~~H~~-~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMR-THTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHH-HHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhh-hcCCCCCCCCCCCcCeeCc
Confidence            4778888 6888899999999888863

...

>PHA00732 hypothetical protein

Probab=98.42  E-value=1.8e-07  Score=59.38  Aligned_cols=48  Identities=21%  Similarity=0.411  Sum_probs=31.8

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhc
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      ||.|..|++.|.+...|..|++..|.+   +.|+.|++.|.   .|..|+.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---ChhhhhcccC
Confidence            467777777777777777776544442   46777777776   4666665543

>PHA00616 hypothetical protein

Probab=98.37  E-value=2.2e-07  Score=50.95  Aligned_cols=35  Identities=14%  Similarity=0.379  Sum_probs=30.4

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCcccccc
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDIC  209 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  209 (275)
                      ||+|+.||+.|...+.|.+|++ .|++++++.|+.=
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r-~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLL-SVHKQNKLTLEYF   35 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHH-HhcCCCccceeEE
Confidence            6999999999999999999998 5666688888753

>PHA00732 hypothetical protein

Probab=98.36  E-value=2.6e-07  Score=58.67  Aligned_cols=48  Identities=25%  Similarity=0.294  Sum_probs=40.5

Q ss_pred             CcccccccccCCChhHHHHHHHh-hcCCCceeCcccchhhhhhhHHHhhhccccc
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRI-HTGEKPYVCEVRLAVFYYVTCLFNMIQPKRF  256 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~~  256 (275)
                      ||.|+.|++.|.+...|..|++. |.+   +.|+.|++.|.   .+..|++.+-.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---ChhhhhcccCC
Confidence            58999999999999999999985 654   57999999997   58888864443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.35  E-value=1e-06  Score=51.92  Aligned_cols=51  Identities=20%  Similarity=0.438  Sum_probs=36.6

Q ss_pred             ceecccccccccCHHHHHHHHHhhcC-CCCCcccccchhhcccchHHHHHHhhhc
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHTD-RKRPFSCEKCDKSFYTQQNLVQHEKTHS   66 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~~~   66 (275)
                      .|.||.|++ ..+...|..|....+. +.+.+.||+|...+.  .+|..|+...|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            588999988 5667888888776443 345688888876543  37777777654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.09  E-value=9.3e-07  Score=59.76  Aligned_cols=73  Identities=19%  Similarity=0.285  Sum_probs=20.9

Q ss_pred             CCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhccc
Q psy12834        176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       176 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~  254 (275)
                      +|..|+..|.+...|..|+...|....+     ....+.....+..+++.-.. ..+.|.+|++.|.+..+|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~~~-~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKKVK-ESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc-----cccccccccccccccccccC-CCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5999999999999999999988876543     12223345555555543322 2689999999999999999999754

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.96  E-value=4.7e-06  Score=39.70  Aligned_cols=22  Identities=36%  Similarity=0.843  Sum_probs=11.2

Q ss_pred             cccccccccCCChhHHHHHHHh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      |+|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.92  E-value=9.5e-06  Score=38.60  Aligned_cols=22  Identities=41%  Similarity=0.812  Sum_probs=16.0

Q ss_pred             eecccccccccCHHHHHHHHHh
Q psy12834         14 YECKTCKKTFVSKYTYKAHLVT   35 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~~   35 (275)
                      |.|+.|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5677777777777777777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.69  E-value=1.4e-05  Score=39.68  Aligned_cols=25  Identities=16%  Similarity=0.291  Sum_probs=15.3

Q ss_pred             ceeCcccchhhhhhhHHHhhhcccc
Q psy12834        231 PYVCEVRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       231 ~~~C~~C~~~~~~~~~~~~H~~~~~  255 (275)
                      ||.|+.|++.|.+..+|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666665543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.68  E-value=2.9e-05  Score=37.20  Aligned_cols=21  Identities=33%  Similarity=0.759  Sum_probs=8.6

Q ss_pred             ccccccccCCChhHHHHHHHh
Q psy12834        205 QCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       205 ~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      .|+.|++.|.+...|..|+..
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHh
Confidence            344444444444444444443

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.66  E-value=4.6e-05  Score=36.47  Aligned_cols=24  Identities=38%  Similarity=0.807  Sum_probs=15.1

Q ss_pred             eecccccccccCHHHHHHHHHhhc
Q psy12834         14 YECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      |.|+.|+..|.+...|+.|+.+++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777776553

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.66  E-value=2.4e-05  Score=38.80  Aligned_cols=25  Identities=36%  Similarity=0.870  Sum_probs=16.3

Q ss_pred             CcccccccccCCChhHHHHHHHhhc
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      +|+|..|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4666666666666666666666554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.52  E-value=5.5e-05  Score=50.97  Aligned_cols=22  Identities=23%  Similarity=0.468  Sum_probs=0.0

Q ss_pred             cccccccccCHHHHHHHHHhhc
Q psy12834         16 CKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        16 C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      |..|+..|.+...|..|+...+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H   23 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKH   23 (100)
T ss_dssp             ----------------------
T ss_pred             cccccccccccccccccccccc
Confidence            5566666666666666665444

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.51  E-value=6.5e-05  Score=42.15  Aligned_cols=40  Identities=28%  Similarity=0.511  Sum_probs=20.8

Q ss_pred             HHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCc
Q psy12834        192 YHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP  231 (275)
Q Consensus       192 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  231 (275)
                      .+.++.+..+.|-.||+|+..+....+|..|+.+.++.+|
T Consensus        13 ~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   13 KKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ---CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3444445556667777777777777777777766665553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG1146|consensus

Probab=97.36  E-value=2.1e-05  Score=73.10  Aligned_cols=201  Identities=16%  Similarity=0.178  Sum_probs=115.1

Q ss_pred             ecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHhhc
Q psy12834         15 ECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHT   94 (275)
Q Consensus        15 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (275)
                      .|..|...+.+...+..|+..=+...+.+.|+.|++.|+....|..||+..+.+..-  ..|.- +..-..+.+-.....
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~-gq~~~~~arg~~~~~  514 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKA-GQNHPRLARGEVYRC  514 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch--hHhHh-ccccccccccccccC
Confidence            355566666666666666654444457789999999999999999999986654321  22211 111111111112234


Q ss_pred             CCCCccCCcccccccChhHHHHHHhhccCCCCccc--ccccc-ccccccCCCcccccccccccccccchHHHHHhhcCCC
Q psy12834         95 GNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC--EFCGA-QFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFN  171 (275)
Q Consensus        95 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c--~~c~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~  171 (275)
                      +.++|.|..|...+..+.+|..|++..-......=  ..-+. .+..... ......+.........       ......
T Consensus       515 ~~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~-v~s~~P~~ag~~~~ag-------s~~pkt  586 (1406)
T KOG1146|consen  515 PGKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPAS-VTSAVPEEAGLGPSAG-------SSGPKT  586 (1406)
T ss_pred             CCCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhh-hcccCcccccCCCCCC-------CCCCCC
Confidence            56789999999999999999999874221100000  00000 0000000 0000000000000000       001334


Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhh
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      ...|.|..|++.-.-..+|+.|+.+.++-..|.-|..++..+.....+..+.+-+
T Consensus       587 kP~~~C~vc~yetniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  587 KPSWRCEVCSYETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             CCCcchhhhcchhhhhhccccccccCCCCCChHHHhhhcchhhccccccCcCCCC
Confidence            5568999999999999999999988777777778888887777777666665554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.28  E-value=9.5e-05  Score=58.34  Aligned_cols=71  Identities=25%  Similarity=0.419  Sum_probs=41.4

Q ss_pred             CCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHh
Q psy12834        172 DKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFN  249 (275)
Q Consensus       172 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~  249 (275)
                      ++||+|++  |++.|.+...|+-|+.--|..++...=|          +=..|.-.-.+.+||+|+.|++.+.+..-|.-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCcccee
Confidence            48888875  8888999999988875444222211111          00011111344567777777777776666666


Q ss_pred             hhc
Q psy12834        250 MIQ  252 (275)
Q Consensus       250 H~~  252 (275)
                      |..
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            654

>smart00355 ZnF_C2H2 zinc finger

Probab=97.13  E-value=0.00048  Score=33.40  Aligned_cols=22  Identities=32%  Similarity=0.662  Sum_probs=10.6

Q ss_pred             ccccccccCCChhHHHHHHHhh
Q psy12834        205 QCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       205 ~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      +|+.|++.|.+...|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4444555555555555544433

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.09  E-value=0.00014  Score=57.36  Aligned_cols=70  Identities=23%  Similarity=0.457  Sum_probs=38.7

Q ss_pred             CCCccccc--chhhcccchHHHHHHhhhcCC-CccccCcchhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHH
Q psy12834         40 KRPFSCEK--CDKSFYTQQNLVQHEKTHSGS-KDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKD  116 (275)
Q Consensus        40 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~  116 (275)
                      +++|+|++  |++.|++...|+-|+..-|.. +...=+          +-..+.-....++||+|.+|++.+.+...|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCcccee
Confidence            46777766  777777777777776543311 000000          00011111234677888888877777777776


Q ss_pred             HHh
Q psy12834        117 HER  119 (275)
Q Consensus       117 H~~  119 (275)
                      |+.
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            654

>PRK04860 hypothetical protein; Provisional

Probab=97.03  E-value=0.00028  Score=51.46  Aligned_cols=39  Identities=26%  Similarity=0.627  Sum_probs=30.8

Q ss_pred             CcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVT  245 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~  245 (275)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            58887 876   6777888888888888888888888876544

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.02  E-value=0.00019  Score=34.72  Aligned_cols=21  Identities=14%  Similarity=0.336  Sum_probs=10.7

Q ss_pred             eeCcccchhhhhhhHHHhhhc
Q psy12834        232 YVCEVRLAVFYYVTCLFNMIQ  252 (275)
Q Consensus       232 ~~C~~C~~~~~~~~~~~~H~~  252 (275)
                      |.|.+|+..|.+..++.+|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.99  E-value=0.0005  Score=32.90  Aligned_cols=23  Identities=26%  Similarity=0.639  Sum_probs=11.5

Q ss_pred             cccccccccCCChhHHHHHHHhhc
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      |+|+.|++... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45555555555 555555555543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.99  E-value=0.00054  Score=38.54  Aligned_cols=28  Identities=21%  Similarity=0.427  Sum_probs=10.0

Q ss_pred             CCCcccccchhhcccchHHHHHHhhhcC
Q psy12834         40 KRPFSCEKCDKSFYTQQNLVQHEKTHSG   67 (275)
Q Consensus        40 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   67 (275)
                      +.+-.|++|+..+....+|.+|+...|.
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            3344444444444444444444444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231|consensus

Probab=96.96  E-value=0.0015  Score=57.74  Aligned_cols=126  Identities=23%  Similarity=0.356  Sum_probs=77.7

Q ss_pred             CCcccccccChhHHHHHHhhccCCCCcccccccc---ccccccCCCcccccccccccccccchHHHHHhhcCCCCC----
Q psy12834        101 CRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGA---QFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDK----  173 (275)
Q Consensus       101 C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~----  173 (275)
                      |..| ..|.....|..|+...|..  +.|..|..   .|...             ...-+...+..|+...-.+++    
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~--~~c~lC~~~~kif~~e-------------~k~Yt~~el~~h~~~gd~d~~s~rG  181 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKL--HLCSLCLQNLKIFINE-------------RKLYTRAELNLHLMFGDPDDESCRG  181 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhh--hccccccccceeeeee-------------eehehHHHHHHHHhcCCCccccccC
Confidence            4444 4445778899998655532  44444432   22111             111345667777763322122    


Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCcccccc------cccCCChhHHHHHHHhhcCCCceeCc--ccchh-----
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDIC------NATFIYPEHFKKHRRIHTGEKPYVCE--VRLAV-----  240 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~-----  240 (275)
                      .-.|..|...|.....|.+|++..|     |.|..|      +.-|.+...|..|.+.++    |.|.  .|...     
T Consensus       182 hp~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~  252 (669)
T KOG2231|consen  182 HPLCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVA  252 (669)
T ss_pred             CccchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccceeeeh
Confidence            2569999999999999999998766     666666      455778889999988766    5555  45443     


Q ss_pred             hhhhhHHHhhh
Q psy12834        241 FYYVTCLFNMI  251 (275)
Q Consensus       241 ~~~~~~~~~H~  251 (275)
                      |.....|..|.
T Consensus       253 ~~~ei~lk~~~  263 (669)
T KOG2231|consen  253 FELEIELKAHN  263 (669)
T ss_pred             hHHHHHHHhhc
Confidence            44445555444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.93  E-value=0.00047  Score=33.32  Aligned_cols=23  Identities=35%  Similarity=0.826  Sum_probs=15.9

Q ss_pred             cccccccccCCChhHHHHHHHhh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      |.|.+|+..|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45777777777777777776653

>smart00355 ZnF_C2H2 zinc finger

Probab=96.66  E-value=0.0016  Score=31.42  Aligned_cols=23  Identities=48%  Similarity=0.876  Sum_probs=14.1

Q ss_pred             eecccccccccCHHHHHHHHHhh
Q psy12834         14 YECKTCKKTFVSKYTYKAHLVTH   36 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~~~   36 (275)
                      |.|+.|+..|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45666666666666666666544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.58  E-value=0.0022  Score=30.59  Aligned_cols=23  Identities=35%  Similarity=0.661  Sum_probs=12.4

Q ss_pred             eecccccccccCHHHHHHHHHhhc
Q psy12834         14 YECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      |+|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666555 556666666544

>KOG2785|consensus

Probab=96.57  E-value=0.013  Score=48.02  Aligned_cols=29  Identities=21%  Similarity=0.030  Sum_probs=24.0

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCC
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTG  200 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  200 (275)
                      ..|-.|..|++.+.+...-..|+...|+.
T Consensus       164 ~~Pt~CLfC~~~~k~~e~~~~HM~~~Hgf  192 (390)
T KOG2785|consen  164 LIPTDCLFCDKKSKSLEENLKHMFKEHGF  192 (390)
T ss_pred             cCCcceeecCCCcccHHHHHHHHhhccCC
Confidence            44567899999999999999999877764

>KOG2231|consensus

Probab=96.56  E-value=0.0086  Score=53.21  Aligned_cols=23  Identities=26%  Similarity=0.663  Sum_probs=12.6

Q ss_pred             cCCcccccccChhHHHHHHhhcc
Q psy12834        100 ICRVCGKSFVRKAEVKDHERTHT  122 (275)
Q Consensus       100 ~C~~C~~~f~~~~~l~~H~~~~~  122 (275)
                      .|..|...|.....|..|++.++
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h  206 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH  206 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce
Confidence            45555555555555555555444

>KOG2482|consensus

Probab=96.55  E-value=0.017  Score=46.56  Aligned_cols=86  Identities=19%  Similarity=0.245  Sum_probs=46.8

Q ss_pred             HHHHHHhhcCCCCCcccccchhhc-ccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHhhcCCCCccCCccccc
Q psy12834         29 YKAHLVTHTDRKRPFSCEKCDKSF-YTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKS  107 (275)
Q Consensus        29 l~~H~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~  107 (275)
                      |+.+++...+.....+|-.|+..+ .+++....|+-..|+-..-.    .........|..|.+....  .+.|--|.+.
T Consensus       131 LeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGl----pDniVyvnelLehLkekL~--r~~CLyCeki  204 (423)
T KOG2482|consen  131 LEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGL----PDNIVYVNELLEHLKEKLE--RLRCLYCEKI  204 (423)
T ss_pred             HHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCC----CcceeeHHHHHHHHHHHHh--hheeeeeccc
Confidence            444555444444556788886544 36666667765544321100    0112223444455433221  3567778888


Q ss_pred             ccChhHHHHHHhh
Q psy12834        108 FVRKAEVKDHERT  120 (275)
Q Consensus       108 f~~~~~l~~H~~~  120 (275)
                      |.++..|..||+.
T Consensus       205 frdkntLkeHMrk  217 (423)
T KOG2482|consen  205 FRDKNTLKEHMRK  217 (423)
T ss_pred             cCCcHHHHHHHHh
Confidence            8888888888775

>KOG2785|consensus

Probab=96.49  E-value=0.004  Score=50.85  Aligned_cols=84  Identities=18%  Similarity=0.261  Sum_probs=68.0

Q ss_pred             CCCCCCCCCCChhhccChhhHHHHHHhhcCC-------------------------------------------------
Q psy12834        170 FNDKRYPCTSCPKAFKRRRLLDYHIKAAHTG-------------------------------------------------  200 (275)
Q Consensus       170 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-------------------------------------------------  200 (275)
                      ..+.++.|..|.+.|.+..+...|+++.-..                                                 
T Consensus        64 ~~~~~~~c~~c~k~~~s~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~  143 (390)
T KOG2785|consen   64 EAESVVYCEACNKSFASPKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSE  143 (390)
T ss_pred             hcccceehHHhhccccChhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccch
Confidence            4567789999999999999999888653210                                                 


Q ss_pred             --------------------CCCcccccccccCCChhHHHHHHHhhcCC-----------------------CceeCccc
Q psy12834        201 --------------------ERPYQCDICNATFIYPEHFKKHRRIHTGE-----------------------KPYVCEVR  237 (275)
Q Consensus       201 --------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C  237 (275)
                                          ..|-.|-.|++.+.+...-..||..+++-                       .-+-|..|
T Consensus       144 e~~~dd~~Edi~~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~C  223 (390)
T KOG2785|consen  144 EEEEDDEEEDIEEDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFC  223 (390)
T ss_pred             hhccCcchhhhhhccchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEe
Confidence                                01367999999999999999999887652                       23889999


Q ss_pred             c---hhhhhhhHHHhhhcc
Q psy12834        238 L---AVFYYVTCLFNMIQP  253 (275)
Q Consensus       238 ~---~~~~~~~~~~~H~~~  253 (275)
                      +   +.|....+.++||..
T Consensus       224 N~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  224 NELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccccCcccccHHHHHHHhh
Confidence            9   999999999999954

>KOG1146|consensus

Probab=96.35  E-value=0.0022  Score=60.31  Aligned_cols=93  Identities=23%  Similarity=0.381  Sum_probs=74.7

Q ss_pred             hHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCC------------------------CCCcccccccccCCC
Q psy12834        160 NLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTG------------------------ERPYQCDICNATFIY  215 (275)
Q Consensus       160 ~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~------------------------~~~~~C~~C~~~f~~  215 (275)
                      .+..+....+...+.|.|+.|++.|.....|..|+|+.|..                        .++|.|..|..+++.
T Consensus       451 ~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~sttt  530 (1406)
T KOG1146|consen  451 SLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTT  530 (1406)
T ss_pred             ccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeec
Confidence            33444444566668899999999999999999999987753                        247999999999999


Q ss_pred             hhHHHHHHHh--hc-----------------------------------C------CCceeCcccchhhhhhhHHHhhhc
Q psy12834        216 PEHFKKHRRI--HT-----------------------------------G------EKPYVCEVRLAVFYYVTCLFNMIQ  252 (275)
Q Consensus       216 ~~~l~~H~~~--h~-----------------------------------~------~~~~~C~~C~~~~~~~~~~~~H~~  252 (275)
                      +..|..|+..  |-                                   +      +..+.|..|++.-+---.|..|+.
T Consensus       531 ng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmt  610 (1406)
T KOG1146|consen  531 NGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMT  610 (1406)
T ss_pred             chHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccc
Confidence            9999999875  30                                   0      114899999999988888988884

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.33  E-value=0.0012  Score=32.60  Aligned_cols=21  Identities=14%  Similarity=0.225  Sum_probs=12.8

Q ss_pred             eeCcccchhhhhhhHHHhhhc
Q psy12834        232 YVCEVRLAVFYYVTCLFNMIQ  252 (275)
Q Consensus       232 ~~C~~C~~~~~~~~~~~~H~~  252 (275)
                      |-|..|++.|.+...+.+|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666666664

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.10  E-value=0.0015  Score=32.22  Aligned_cols=22  Identities=27%  Similarity=0.712  Sum_probs=12.8

Q ss_pred             cccccccccCCChhHHHHHHHh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666655543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.91  E-value=0.0075  Score=48.53  Aligned_cols=23  Identities=26%  Similarity=0.561  Sum_probs=15.4

Q ss_pred             cCCcccccccChhHHHHHHhhcc
Q psy12834        100 ICRVCGKSFVRKAEVKDHERTHT  122 (275)
Q Consensus       100 ~C~~C~~~f~~~~~l~~H~~~~~  122 (275)
                      .|.+|...|.+-+.|..|++..+
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~H  244 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRH  244 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhh
Confidence            46667766777777777766554

>KOG2482|consensus

Probab=95.66  E-value=0.018  Score=46.39  Aligned_cols=64  Identities=17%  Similarity=0.374  Sum_probs=42.5

Q ss_pred             ChhhhcccCCC--Cceecccccc-cccCHHHHHHHHHhhcC---------------------CCCCcccccchhhcccch
Q psy12834          1 MEDHLVSHTGA--RPYECKTCKK-TFVSKYTYKAHLVTHTD---------------------RKRPFSCEKCDKSFYTQQ   56 (275)
Q Consensus         1 ~~~~~~~~~~~--~~~~C~~C~~-~f~~~~~l~~H~~~~~~---------------------~~~~~~C~~C~~~f~~~~   56 (275)
                      |+++|+.- .+  ....|-.|+. ...+.+....|+-.-|+                     .-..+.|-.|.+.|+++.
T Consensus       131 LeqqQ~Er-edt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkn  209 (423)
T KOG2482|consen  131 LEQQQKER-EDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKN  209 (423)
T ss_pred             HHHHHHHh-cCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcH
Confidence            34455544 33  3567999974 55666666777653322                     012478999999999999


Q ss_pred             HHHHHHhhh
Q psy12834         57 NLVQHEKTH   65 (275)
Q Consensus        57 ~l~~H~~~~   65 (275)
                      .|..||+..
T Consensus       210 tLkeHMrkK  218 (423)
T KOG2482|consen  210 TLKEHMRKK  218 (423)
T ss_pred             HHHHHHHhc
Confidence            999999754

>PRK04860 hypothetical protein; Provisional

Probab=95.60  E-value=0.0049  Score=45.01  Aligned_cols=40  Identities=25%  Similarity=0.650  Sum_probs=34.0

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChh
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPE  217 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~  217 (275)
                      -+|.|. |+.   ....+.+|.+ .|.++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~r-i~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNR-VVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHH-HhcCCccEECCCCCceeEEec
Confidence            369998 998   7788889987 899999999999999886543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.31  E-value=0.018  Score=27.70  Aligned_cols=21  Identities=19%  Similarity=0.444  Sum_probs=15.1

Q ss_pred             eecccccccccCHHHHHHHHHh
Q psy12834         14 YECKTCKKTFVSKYTYKAHLVT   35 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~~   35 (275)
                      ..|+.||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4688888888 56677777654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.28  E-value=0.038  Score=44.66  Aligned_cols=67  Identities=30%  Similarity=0.496  Sum_probs=33.9

Q ss_pred             CCCCChhhccChhhHHHHHHhhcCCCCCccccccccc-------CCChhHHHHHHHhhcCCCceeCcc--cc----hhhh
Q psy12834        176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNAT-------FIYPEHFKKHRRIHTGEKPYVCEV--RL----AVFY  242 (275)
Q Consensus       176 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~~~  242 (275)
                      .|..|...|-+...|..|.+..|.     .|-+|++.       |.+..+|..|.+.    .-|.|..  |.    ..|.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~----~hy~ct~qtc~~~k~~vf~  292 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRN----AHYCCTFQTCRVGKCYVFP  292 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhc----CceEEEEEEEecCcEEEec
Confidence            366666666666666666664442     24444332       4444455544332    2344443  32    2355


Q ss_pred             hhhHHHhhh
Q psy12834        243 YVTCLFNMI  251 (275)
Q Consensus       243 ~~~~~~~H~  251 (275)
                      ....|+.|+
T Consensus       293 ~~~el~~h~  301 (493)
T COG5236         293 YHTELLEHL  301 (493)
T ss_pred             cHHHHHHHH
Confidence            666666665

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.83  E-value=0.016  Score=30.44  Aligned_cols=23  Identities=9%  Similarity=0.157  Sum_probs=17.2

Q ss_pred             ceeCcccchhhhhhhHHHhhhcc
Q psy12834        231 PYVCEVRLAVFYYVTCLFNMIQP  253 (275)
Q Consensus       231 ~~~C~~C~~~~~~~~~~~~H~~~  253 (275)
                      +|.|.+|+..|.....+.+|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46788888888877777787753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.80  E-value=0.023  Score=29.76  Aligned_cols=23  Identities=26%  Similarity=0.545  Sum_probs=18.0

Q ss_pred             CcccccccccCCChhHHHHHHHh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      +|.|.+|+..|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47788888888888888888754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=94.47  E-value=0.059  Score=36.84  Aligned_cols=27  Identities=19%  Similarity=0.411  Sum_probs=20.6

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTG  200 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  200 (275)
                      +-..|..|+.+..- +.+..|++..|..
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~   36 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHI   36 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhccc
Confidence            34569999988776 8888999876654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4173|consensus

Probab=94.43  E-value=0.027  Score=41.98  Aligned_cols=76  Identities=20%  Similarity=0.364  Sum_probs=61.5

Q ss_pred             CCCCCCC--ChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHH-hh---------cCCCceeCcc--cc
Q psy12834        173 KRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRR-IH---------TGEKPYVCEV--RL  238 (275)
Q Consensus       173 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---------~~~~~~~C~~--C~  238 (275)
                      ..+.|+.  |...|.+......|+.+.|+.    .|..|.+.|.+..-|-.|+. .|         -|...|+|..  |+
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            4577876  888999999899998877776    49999999999988888874 34         2456699976  99


Q ss_pred             hhhhhhhHHHhhhc
Q psy12834        239 AVFYYVTCLFNMIQ  252 (275)
Q Consensus       239 ~~~~~~~~~~~H~~  252 (275)
                      ..|.+..+-..|+-
T Consensus       154 ~KFkT~r~RkdH~I  167 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMI  167 (253)
T ss_pred             hhhhhhhhhhhHHH
Confidence            99999999999984

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.24  E-value=0.041  Score=26.44  Aligned_cols=18  Identities=39%  Similarity=1.023  Sum_probs=8.6

Q ss_pred             ccccccccCCChhHHHHHH
Q psy12834        205 QCDICNATFIYPEHFKKHR  223 (275)
Q Consensus       205 ~C~~C~~~f~~~~~l~~H~  223 (275)
                      .|+.|+..| ....|..|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            445555555 444444444

>KOG2893|consensus

Probab=93.36  E-value=0.025  Score=43.16  Aligned_cols=44  Identities=23%  Similarity=0.465  Sum_probs=31.0

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHH
Q psy12834         14 YECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHE   62 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   62 (275)
                      -+|=.|++.|.+...|..|++..     .|+|.+|.+...+.-.|..|-
T Consensus        11 pwcwycnrefddekiliqhqkak-----hfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKAK-----HFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             ceeeecccccchhhhhhhhhhhc-----cceeeeehhhhccCCCceeeh
Confidence            35777888888888887777643     478888876666666666663

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.17  E-value=0.049  Score=28.19  Aligned_cols=11  Identities=27%  Similarity=0.884  Sum_probs=6.4

Q ss_pred             CCCCCChhhcc
Q psy12834        175 YPCTSCPKAFK  185 (275)
Q Consensus       175 ~~C~~C~~~f~  185 (275)
                      |.|..||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            55666665544

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.96  E-value=0.065  Score=30.76  Aligned_cols=31  Identities=26%  Similarity=0.488  Sum_probs=24.0

Q ss_pred             CCCCCCCCCCCChhhccChhhHHHHHHhhcC
Q psy12834        169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHT  199 (275)
Q Consensus       169 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  199 (275)
                      -.++.-+.||.||+.|....+..+|....|.
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3567778888888888888888888776553

>KOG2893|consensus

Probab=92.18  E-value=0.033  Score=42.57  Aligned_cols=45  Identities=29%  Similarity=0.659  Sum_probs=36.4

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHH
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHR  223 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  223 (275)
                      ++| |-+|++.|.+..-|.+|.+..|     |+|-+|.+..-+--.|..|-
T Consensus        10 kpw-cwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceeeh
Confidence            344 9999999999999999887555     99999998877777777764

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.96  E-value=0.32  Score=33.04  Aligned_cols=25  Identities=24%  Similarity=0.571  Sum_probs=13.5

Q ss_pred             CcccccccccCCChhHHHHHHHhhc
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      +|+|+.|...|-..-++-.|...|.
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhccC
Confidence            4555555555555555555544443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.82  E-value=0.065  Score=46.21  Aligned_cols=159  Identities=27%  Similarity=0.455  Sum_probs=96.0

Q ss_pred             CccccCcchhhcCChHHHHHHHH--hhcCC--CCccCC--cccccccChhHHHHHHhhccCCCCccccccccccccccCC
Q psy12834         69 KDFVCTECGKAFGTLRNLEVHLA--VHTGN--RPFICR--VCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSS  142 (275)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~  142 (275)
                      .++.|..|...|.....+..|..  .|.++  .++.|+  .|++.|.....+..|...+.+..+..+.............
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            35778888888888888888888  78888  888888  7888888888888888888877665554333222111111


Q ss_pred             CcccccccccccccccchHHHHHhhcCCCCCCCCCC--CChhhccChhhHHHHHHhhcCCCC--CcccccccccCCChhH
Q psy12834        143 GTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGER--PYQCDICNATFIYPEH  218 (275)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~--~~~C~~C~~~f~~~~~  218 (275)
                      ...           ....  ............+.+.  .|...+.....+..|.. .|-...  .+.+..|.+.+.....
T Consensus       368 ~~~-----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  433 (467)
T COG5048         368 NNE-----------PPQS--LQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHII-THLSFRPYNCKNPPCSKSFNRHYN  433 (467)
T ss_pred             CCC-----------Cccc--hhhccCccCCccccccccchhhhhccccccccccc-cccccCCcCCCCCcchhhccCccc
Confidence            000           0000  0000011122222222  24444444444444432 333333  4677788888888888


Q ss_pred             HHHHHHhhcCCCceeCcccchhh
Q psy12834        219 FKKHRRIHTGEKPYVCEVRLAVF  241 (275)
Q Consensus       219 l~~H~~~h~~~~~~~C~~C~~~~  241 (275)
                      +..|++.|....++.|..+....
T Consensus       434 ~~~~~~~~~~~~~~~~~~~~~~~  456 (467)
T COG5048         434 LIPHKKIHTNHAPLLCSILKSFR  456 (467)
T ss_pred             ccccccccccCCceeeccccccc
Confidence            88888888888877776655543

>KOG4173|consensus

Probab=91.24  E-value=0.13  Score=38.50  Aligned_cols=74  Identities=27%  Similarity=0.518  Sum_probs=42.9

Q ss_pred             ceeccc--ccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhc----------CCCccccCc--chh
Q psy12834         13 PYECKT--CKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHS----------GSKDFVCTE--CGK   78 (275)
Q Consensus        13 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~----------~~~~~~C~~--C~~   78 (275)
                      .|.|++  |.+.|.+...+..|..+-++    -.|..|.+.|++..-|..|....|          +...|.|-+  |+.
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~----~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG----NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc----chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            355654  55666666666666655443    357777777777777777654332          234455543  666


Q ss_pred             hcCChHHHHHHH
Q psy12834         79 AFGTLRNLEVHL   90 (275)
Q Consensus        79 ~f~~~~~l~~H~   90 (275)
                      .|.....-..|+
T Consensus       155 KFkT~r~RkdH~  166 (253)
T KOG4173|consen  155 KFKTSRDRKDHM  166 (253)
T ss_pred             hhhhhhhhhhHH
Confidence            666555555554

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=88.43  E-value=0.29  Score=28.75  Aligned_cols=32  Identities=25%  Similarity=0.608  Sum_probs=18.5

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccc
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNA  211 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  211 (275)
                      .|.||.||........-=      -....+|+|+.||+
T Consensus        27 ~F~CPnCGe~~I~Rc~~C------Rk~g~~Y~Cp~CGF   58 (61)
T COG2888          27 KFPCPNCGEVEIYRCAKC------RKLGNPYRCPKCGF   58 (61)
T ss_pred             EeeCCCCCceeeehhhhH------HHcCCceECCCcCc
Confidence            477888886655433221      12234578887775

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=88.21  E-value=0.27  Score=25.61  Aligned_cols=24  Identities=33%  Similarity=0.818  Sum_probs=14.3

Q ss_pred             CCCCCChhhccChhhHHHHHHhhcCCCCCcccccccc
Q psy12834        175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNA  211 (275)
Q Consensus       175 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  211 (275)
                      |.|..||..+...             +.|..||.|+.
T Consensus         3 ~~C~~CG~i~~g~-------------~~p~~CP~Cg~   26 (34)
T cd00729           3 WVCPVCGYIHEGE-------------EAPEKCPICGA   26 (34)
T ss_pred             EECCCCCCEeECC-------------cCCCcCcCCCC
Confidence            6677777654321             24567777764

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.20  E-value=0.83  Score=31.15  Aligned_cols=25  Identities=28%  Similarity=0.558  Sum_probs=18.6

Q ss_pred             ccC----CcccccccChhHHHHHHhhccC
Q psy12834         99 FIC----RVCGKSFVRKAEVKDHERTHTG  123 (275)
Q Consensus        99 ~~C----~~C~~~f~~~~~l~~H~~~~~~  123 (275)
                      |.|    ..|++...+...+.+|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            677    7777777777777777776654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=88.13  E-value=0.099  Score=40.48  Aligned_cols=44  Identities=23%  Similarity=0.535  Sum_probs=27.4

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCC---------CCC-----cccccccccCCCh
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTG---------ERP-----YQCDICNATFIYP  216 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~---------~~~-----~~C~~C~~~f~~~  216 (275)
                      +...||.|+..|.+........+.....         ..|     ..||.||.++...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            4578999999998865544444322221         112     4788888887644

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.06  E-value=0.34  Score=27.91  Aligned_cols=28  Identities=18%  Similarity=0.149  Sum_probs=16.7

Q ss_pred             CCCceeCcccchhhhhhhHHHhhhcccc
Q psy12834        228 GEKPYVCEVRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       228 ~~~~~~C~~C~~~~~~~~~~~~H~~~~~  255 (275)
                      ||-.+.|+.|+..|....+...|+.+-|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4455666666666666666666664433

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=87.33  E-value=0.34  Score=25.87  Aligned_cols=13  Identities=23%  Similarity=0.764  Sum_probs=6.6

Q ss_pred             CCCCChhhccChh
Q psy12834        176 PCTSCPKAFKRRR  188 (275)
Q Consensus       176 ~C~~C~~~f~~~~  188 (275)
                      .|+.|+..|.-..
T Consensus         4 ~CP~C~~~~~v~~   16 (38)
T TIGR02098         4 QCPNCKTSFRVVD   16 (38)
T ss_pred             ECCCCCCEEEeCH
Confidence            4555555554433

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=87.30  E-value=0.16  Score=43.80  Aligned_cols=55  Identities=35%  Similarity=0.696  Sum_probs=36.3

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCCCCCccccc--chhhcccchHHHHHHhhhc
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK--CDKSFYTQQNLVQHEKTHS   66 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~   66 (275)
                      ...+.|+.|...|........|...+.. ++++.|..  |...+.....+..|...++
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (467)
T COG5048          31 PRPDSCPNCTDSFSRLEHLTRHIRSHTG-EKPSQCSYSGCDKSFSRPLELSRHLRTHH   87 (467)
T ss_pred             Cchhhcccccccccccchhhhhcccccc-cCCccccccccccccCCcchhhhhccccc
Confidence            3456777777777777777777777764 55677765  4555666666666665553

>PF12907 zf-met2: Zinc-binding

Probab=86.58  E-value=0.49  Score=25.60  Aligned_cols=32  Identities=22%  Similarity=0.448  Sum_probs=18.9

Q ss_pred             CCCCCChhhcc---ChhhHHHHHHhhcCCCCCccc
Q psy12834        175 YPCTSCPKAFK---RRRLLDYHIKAAHTGERPYQC  206 (275)
Q Consensus       175 ~~C~~C~~~f~---~~~~l~~H~~~~H~~~~~~~C  206 (275)
                      +.|.+|...|.   +...|..|..+.|+...+..|
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~C   36 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTFEEC   36 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHc
Confidence            45777774433   445677777666766544444

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=85.45  E-value=0.59  Score=24.83  Aligned_cols=32  Identities=25%  Similarity=0.617  Sum_probs=15.6

Q ss_pred             CCCCChhhccChhhHHHHHHhhcCCCCCcccccccccC
Q psy12834        176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF  213 (275)
Q Consensus       176 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  213 (275)
                      .||.|+..|.-..+-      .-......+|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~~------l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDK------LPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHHH------cccCCcEEECCCCCcEe
Confidence            466666665544431      12233345666665544

>KOG2186|consensus

Probab=84.10  E-value=0.67  Score=36.08  Aligned_cols=46  Identities=22%  Similarity=0.522  Sum_probs=32.1

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHH
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHE   62 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   62 (275)
                      .|.|..||....-+ .+..|+-..++  .-|.|-.|+..|.. .++..|.
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn--~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN--AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC--CeeEEeeccccccc-chhhhhh
Confidence            47788888777755 45558777775  35788888888877 5556664

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=84.10  E-value=0.65  Score=31.53  Aligned_cols=30  Identities=30%  Similarity=0.803  Sum_probs=16.8

Q ss_pred             cccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCCh
Q psy12834         43 FSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTL   83 (275)
Q Consensus        43 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~   83 (275)
                      ..|+.|+..|...           +..|..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4566666666542           22455666666666543

The function of members of this family is unknown.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.98  E-value=0.76  Score=24.24  Aligned_cols=32  Identities=19%  Similarity=0.525  Sum_probs=15.9

Q ss_pred             CCCCChhhccChhhHHHHHHhhcCCCCCcccccccccC
Q psy12834        176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF  213 (275)
Q Consensus       176 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  213 (275)
                      .|+.|+..|.-....      +-......+|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~------ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEK------IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHH------CCCCCcEEECCCCCCEe
Confidence            466666665554432      22333345666665544

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=83.69  E-value=0.81  Score=22.16  Aligned_cols=9  Identities=33%  Similarity=0.840  Sum_probs=5.2

Q ss_pred             ccccccccC
Q psy12834        205 QCDICNATF  213 (275)
Q Consensus       205 ~C~~C~~~f  213 (275)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            466666555

Several members are annotated as putative helicases.

>KOG2186|consensus

Probab=83.63  E-value=0.68  Score=36.05  Aligned_cols=50  Identities=26%  Similarity=0.554  Sum_probs=29.7

Q ss_pred             cccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHhhcC
Q psy12834         43 FSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG   95 (275)
Q Consensus        43 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (275)
                      |.|..|+....- ..+.+|+...++ .-|.|-.|+.+|.. .++..|..--++
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCITE   53 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCITE   53 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcch
Confidence            567777665543 334557766665 44677777777765 556666543333

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.61  E-value=1.4  Score=29.91  Aligned_cols=80  Identities=19%  Similarity=0.158  Sum_probs=54.1

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCC-C------------CCcccccccccCCChhHHHHHHHhhcCCCceeCcccc
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTG-E------------RPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRL  238 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-~------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  238 (275)
                      +-|-.|+.||.+..+.-.|.+-+  +|-- .            ....|-.|+..|.......  ...-.....|+|..|.
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~   88 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCK   88 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCccccc--ccccccccceeCCCCC
Confidence            34678999999999888887653  2311 1            1124999999998654111  0002234579999999


Q ss_pred             hhhhhhhHHHhhhcccc
Q psy12834        239 AVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       239 ~~~~~~~~~~~H~~~~~  255 (275)
                      ..|-..=++..|-..|.
T Consensus        89 ~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        89 NVFCVDCDVFVHESLHC  105 (112)
T ss_pred             CccccccchhhhhhccC
Confidence            99998888888876554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=82.98  E-value=0.21  Score=36.27  Aligned_cols=20  Identities=10%  Similarity=-0.147  Sum_probs=10.7

Q ss_pred             eeCcccchhhhhhhHHHhhh
Q psy12834        232 YVCEVRLAVFYYVTCLFNMI  251 (275)
Q Consensus       232 ~~C~~C~~~~~~~~~~~~H~  251 (275)
                      |+|..||..|.+.+.+..-+
T Consensus        29 ~~c~~c~~~f~~~e~~~~~~   48 (154)
T PRK00464         29 RECLACGKRFTTFERVELVP   48 (154)
T ss_pred             eeccccCCcceEeEeccCcc
Confidence            55555555555555554444

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.76  E-value=0.19  Score=38.89  Aligned_cols=23  Identities=22%  Similarity=0.515  Sum_probs=15.6

Q ss_pred             CCceecccccccccCHHHHHHHH
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHL   33 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~   33 (275)
                      ++.++||+|+..|.+........
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~   25 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKI   25 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCc
Confidence            56788888888887765443333

>KOG1280|consensus

Probab=82.66  E-value=0.9  Score=37.11  Aligned_cols=41  Identities=17%  Similarity=0.487  Sum_probs=29.6

Q ss_pred             CCCCCCCCCCChhhccChhhHHHHHHhhcCCCCC-ccccccc
Q psy12834        170 FNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERP-YQCDICN  210 (275)
Q Consensus       170 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~-~~C~~C~  210 (275)
                      .....|.|++|+.+=.+...|..|+.+.|..... ..|++|+
T Consensus        75 y~~qSftCPyC~~~Gfte~~f~~Hv~s~Hpda~~~~icp~c~  116 (381)
T KOG1280|consen   75 YDPQSFTCPYCGIMGFTERQFGTHVLSQHPEASTSVICPLCA  116 (381)
T ss_pred             cccccccCCcccccccchhHHHHHhhhcCcccCcceeeeccc
Confidence            3445788999988888888888888888866542 3466664

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=82.51  E-value=0.84  Score=25.35  Aligned_cols=11  Identities=27%  Similarity=0.613  Sum_probs=5.4

Q ss_pred             cccccccccCC
Q psy12834        204 YQCDICNATFI  214 (275)
Q Consensus       204 ~~C~~C~~~f~  214 (275)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            44555554443

present in RNA polymerase I, II and III

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=82.50  E-value=0.78  Score=27.04  Aligned_cols=33  Identities=21%  Similarity=0.572  Sum_probs=17.7

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccc
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNA  211 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  211 (275)
                      -.|.|+.||......-.-      --....+|+|+.||+
T Consensus        24 ~~F~CPnCG~~~I~RC~~------CRk~~~~Y~CP~CGF   56 (59)
T PRK14890         24 VKFLCPNCGEVIIYRCEK------CRKQSNPYTCPKCGF   56 (59)
T ss_pred             CEeeCCCCCCeeEeechh------HHhcCCceECCCCCC
Confidence            447788888763332211      112234577777774

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=82.19  E-value=1.4  Score=21.32  Aligned_cols=20  Identities=20%  Similarity=0.391  Sum_probs=13.0

Q ss_pred             ccccccccCCChhHHHHHHHh
Q psy12834        205 QCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       205 ~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      .||+|++.+ ....+..|+..
T Consensus         3 ~CPiC~~~v-~~~~in~HLD~   22 (26)
T smart00734        3 QCPVCFREV-PENLINSHLDS   22 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHHH
Confidence            577777776 55666666653

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=81.83  E-value=0.94  Score=30.77  Aligned_cols=14  Identities=21%  Similarity=0.579  Sum_probs=6.6

Q ss_pred             CCCCCCCChhhccC
Q psy12834        173 KRYPCTSCPKAFKR  186 (275)
Q Consensus       173 ~~~~C~~C~~~f~~  186 (275)
                      .|..||+||..|.-
T Consensus        25 ~PivCP~CG~~~~~   38 (108)
T PF09538_consen   25 DPIVCPKCGTEFPP   38 (108)
T ss_pred             CCccCCCCCCccCc
Confidence            34445555544443

The function of members of this family is unknown.

>PHA00626 hypothetical protein

Probab=81.52  E-value=0.81  Score=26.49  Aligned_cols=10  Identities=30%  Similarity=0.550  Sum_probs=4.7

Q ss_pred             cccccccccC
Q psy12834        204 YQCDICNATF  213 (275)
Q Consensus       204 ~~C~~C~~~f  213 (275)
                      |+|+.|+..|
T Consensus        24 YkCkdCGY~f   33 (59)
T PHA00626         24 YVCCDCGYND   33 (59)
T ss_pred             eEcCCCCCee
Confidence            4444444444

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=80.91  E-value=0.84  Score=35.69  Aligned_cols=26  Identities=19%  Similarity=0.475  Sum_probs=16.3

Q ss_pred             CCCCccCCcccccccChhHHHHHHhh
Q psy12834         95 GNRPFICRVCGKSFVRKAEVKDHERT  120 (275)
Q Consensus        95 ~~~~~~C~~C~~~f~~~~~l~~H~~~  120 (275)
                      ..+++.|+.|++.......|..-.+.
T Consensus       206 k~k~~PCPKCg~et~eTkdLSmStR~  231 (314)
T PF06524_consen  206 KGKPIPCPKCGYETQETKDLSMSTRS  231 (314)
T ss_pred             cCCCCCCCCCCCcccccccceeeeec
Confidence            45778888888766555555444433

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=80.51  E-value=1.1  Score=32.86  Aligned_cols=30  Identities=23%  Similarity=0.528  Sum_probs=18.4

Q ss_pred             CCcccccchhhcccchHHHHHHhhhcCCCccccCcchhh
Q psy12834         41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKA   79 (275)
Q Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~   79 (275)
                      .-|.|+.|+..|....++.         ..|.|+.||..
T Consensus       108 ~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       108 MFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             CeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            3466777766666665553         24677777665

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=80.04  E-value=1  Score=33.16  Aligned_cols=23  Identities=39%  Similarity=0.940  Sum_probs=16.0

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCccccccc
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICN  210 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  210 (275)
                      -|.|+.||.              .+.++.|-+||+|+
T Consensus       134 ~~vC~vCGy--------------~~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGY--------------THEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCC--------------cccCCCCCcCCCCC
Confidence            677888874              34446777788887

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	275
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-35
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-17
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-15
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-11
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-14
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		7e-08
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-13
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-13
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-13
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-13
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-09
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-13
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-09
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		7e-13
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-09
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-13
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-13
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		9e-13
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-07
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-12
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		8e-09
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-12
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-09
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-09
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-12
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-12
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-08
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-11
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		6e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-10
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		9e-09
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-09
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		9e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		6e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-08
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-07
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-07
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		5e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		5e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		6e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		1e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		1e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		4e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		4e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-04
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
2ep0_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		2e-04
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-04
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eqw_A	42	Solution Structure Of The 6th C2h2 Type Zinc Finger		4e-04
2ep2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2ena_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		6e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		6e-04
2en6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2yti_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 21/191 (10%)
Query: 40  KRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPF 99
           ++P++C +C KSF    +L +H++TH+G K + C ECGK+F   ++L  H   HTG +P+
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78
Query: 100 ICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRS 159
            C  CGKSF ++A ++ H+RTHTGEKPY C  CG  F                   SQ +
Sbjct: 79  KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSF-------------------SQLA 119
Query: 160 NLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHF 219
           +L++H+R TH  +K Y C  C K+F R   L  H +  HTGE+PY+C  C  +F   +  
Sbjct: 120 HLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRT-HTGEKPYKCPECGKSFSRRDAL 177
Query: 220 KKHRRIHTGEK 230
             H+R HTG+K
Sbjct: 178 NVHQRTHTGKK 188

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 40  KRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPF 99
           ++P+ C +C KSF    NL +H++TH+G K + C ECGK+F    +L+ H   HTG +P+
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 100 ICRVCGKSFVRKAEVKDHERTHTGEK 125
            C  CGKSF R   +  H+RTH  +K
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 124 EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKA 183
           EKPY+C  CG  F                   SQ SNLQ H+R TH  +K Y C  C K+
Sbjct: 2   EKPYKCPECGKSF-------------------SQSSNLQKHQR-THTGEKPYKCPECGKS 41
Query: 184 FKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
           F +   L  H +  HTGE+PY+C  C  +F   +H  +H+R H  +K
Sbjct: 42  FSQSSDLQKHQRT-HTGEKPYKCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 9   TGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGS 68
           +G+   EC TC K F+SKY  K H   HT  K PF C KC K ++ ++NL++HE  +  +
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEK-PFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 69  KD---FVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHE-RTHTG 123
           +    F C+ C + F     L +H+  HTG  P+ C  C + F++K +++ H  + H+G
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 94  TGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLC 153
           +G+    C  C K F+ K  +K H R HTGEKP++C  CG                   C
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGK------------------C 44
Query: 154 FLSQRSNLQSHKRATHFN--DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNA 211
           +  ++ NL  H+     N  ++ + C+ C + F+RR  L  H+  +HTGE PY+C  C+ 
Sbjct: 45  YF-RKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM-VSHTGEMPYKCSSCSQ 102
Query: 212 TFIYPEHFKKHR-RIHTG 228
            F+  +  + H  ++H+G
Sbjct: 103 QFMQKKDLQSHMIKLHSG 120

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 40  KRPFSCE--KCDKSFYTQQNLVQHEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTG 95
           KRPF C    C+K ++   +L  H + H+G K + C   +C + F     L+ H   HTG
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 96  NRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSS 142
            +PF C+ C + F R   +K H RTHTGEKP+ C +   Q +F  S 
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSD 110

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 159 SNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYP 216
           S+LQ H R  H  +K Y C    C + F R   L  H +  HTG +P+QC  C   F   
Sbjct: 22  SHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGVKPFQCKTCQRKFSRS 79
Query: 217 EHFKKHRRIHTGEKPYVC 234
           +H K H R HTGEKP+ C
Sbjct: 80  DHLKTHTRTHTGEKPFSC 97

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 40  KRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
           +RP++C  E CD+ F    NL +H + H+G K F C  C + F    +L  H+  HTG +
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 98  PFICRVCGKSFVRKAEVKDHERTHTGEK 125
           PF C +CG+ F R  E K H + H  +K
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F     L  HI+  HTG++P+QC IC   F   +H   H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSDSSNLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 48  CDKSFYTQQNLVQH-EKTHSGS---KDFVC--TEC---GKAFGTLRNLEVHLAVHTGNRP 98
           CD++F T   LV H    H G     + VC   EC   GK+F     L  H+ VHTG +P
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 99  FICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSS 142
           F C    CGK F R   +K H+RTHTGEKP++CEF G   RF  SS
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSS 136

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 180 CP---KAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVC 234
           CP   K+FK +  L  HI+  HTGE+P+ C    C   F   E+ K H+R HTGEKP+ C
Sbjct: 65  CPREGKSFKAKYKLVNHIRV-HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123
Query: 235 E 235
           E
Sbjct: 124 E 124

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
Query: 69  KDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGE 124
           K ++C+  +CG A+     L+ HL  HTG +PF C+   C K F     +  H  THTGE
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70
Query: 125 KPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAF 184
           K + C+  G   RF   +  +          ++  N++      HF +       C KAF
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKK-------HFNRFHNIKICVYVCHFEN-------CGKAF 116
Query: 185 KRRRLLDYHIKAAHTGERPYQC--DICNATFIYPEHFKKHRRIHTG 228
           K+   L  H + +HT + PY+C  + C+  F  P   K+H ++H G
Sbjct: 117 KKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 76  CGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQ 135
           C + F    NL+ H+ +HTG +PF CR+C ++F ++A +  H RTHTGEKP+ C+ CG +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 136 F 136
           F
Sbjct: 72  F 72

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F ++  LD HI+  HTG++P+QC IC   F        H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSQKTNLDTHIRI-HTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 40  KRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
           +RP++C  E CD+ F    +L +H + H+G K F C  C + F    +L  H+  HTG +
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 98  PFICRVCGKSFVRKAEVKDHERTHTGEK 125
           PF C +CG+ F R  E K H + H  +K
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F R   L  HI+  HTG++P+QC IC   F   +H   H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSRSADLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 40  KRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
           +RP++C  E CD+ F     L +H + H+G K F C  C + F    +L  H+  HTG +
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 98  PFICRVCGKSFVRKAEVKDHERTHTGEK 125
           PF C +CG+ F R  E K H + H  +K
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F R   L  HI+  HTG++P+QC IC   F   +H   H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 40  KRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
           +RP++C  E CD+ F    +L +H + H+G K F C  C + F    +L  H+  HTG +
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 98  PFICRVCGKSFVRKAEVKDHERTHTGEK 125
           PF C +CG+ F R  E K H + H  +K
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F +   L  HI+  HTG++P+QC IC   F   +H   H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 40  KRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
           +RP++C  E CD+ F     L +H + H+G K F C  C + F    +L  H+  HTG +
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 98  PFICRVCGKSFVRKAEVKDHERTHTGEK 125
           PF C +CG+ F R  E K H + H  +K
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F R   L  HI+  HTG++P+QC IC   F   +H   H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSRSAELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 19/97 (19%)
Query: 70  DFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
            F C  CGK+F     L  HL +H+  RP+ C+ CGK F +K+++K H   HTGEKP++C
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 130 EFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKR 166
           + CG  F                   SQ SNL +H R
Sbjct: 61  QVCGKAF-------------------SQSSNLITHSR 78

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
           + C  C K+FKR   L  H+   H+  RPY C  C   F      KKH  IHTGEKP+ C
Sbjct: 2   FDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 235 EVRLAVFYYVTCLFNMIQPKRFRLG 259
           +V    F   +   N+I   R   G
Sbjct: 61  QVCGKAFSQSS---NLITHSRKHTG 82

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 17  KTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT-- 74
           K C K F      + HL  HT   R   C +C K+F     L +H+  H+G K F CT  
Sbjct: 11  KGCTKMFRDNSAMRKHL--HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFE 68
Query: 75  ECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQ 128
            CGK F    NL  H+ +HTG+RP++C    C K F +   +K H  TH   K  Q
Sbjct: 69  GCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 62/157 (39%), Gaps = 50/157 (31%)
Query: 76  CGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQ 135
           C K F     +  HL  H G R  +C  CGK+FV  +++K H+  HTGEKP+QC F G  
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 136 FRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIK 195
            RF       S+D           NL++H R                             
Sbjct: 72  KRF-------SLD----------FNLRTHVR----------------------------- 85
Query: 196 AAHTGERPYQC--DICNATFIYPEHFKKHRRIHTGEK 230
             HTG+RPY C  D CN  F    + K H   H   K
Sbjct: 86  -IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 156 SQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC--DICNATF 213
           + R +L +H    H       C  C KAF     L  H +  HTGE+P+QC  + C   F
Sbjct: 22  AMRKHLHTHGPRVHV------CAECGKAFVESSKLKRH-QLVHTGEKPFQCTFEGCGKRF 74
Query: 214 IYPEHFKKHRRIHTGEKPYVC 234
               + + H RIHTG++PYVC
Sbjct: 75  SLDFNLRTHVRIHTGDRPYVC 95

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 40  KRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
           +RP++C  E CD+ F     L +H + H+G K F C  C + F    +L  H+  HTG +
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 98  PFICRVCGKSFVRKAEVKDHERTH 121
           PF C +CG+ F R  E K H + H
Sbjct: 61  PFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F R   L  HI+  HTG++P+QC IC   F   +H   H R HTGEKP+ C+
Sbjct: 7   PVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 65
Query: 236 V 236
           +
Sbjct: 66  I 66

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 40  KRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
           +RP++C  E CD+ F     L +H + H+G K F C  C + F    +L  H+  HTG +
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 98  PFICRVCGKSFVRKAEVKDHERTH 121
           PF C +CG+ F R  E K H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F R   L  HI+  HTG++P+QC IC   F   +H   H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 46  EKCDKSFYTQQNLVQH---EKTHSGSKDFVCTECG-----KAFGTLRNLEVHLAVHTGNR 97
           + C + F +Q+ LV H   E  H   K+FVC   G     + F     L VH+  HTG +
Sbjct: 7   DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEK 66
Query: 98  PFIC--RVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFL 155
           P  C    C KS+ R   +K H R+HTGEKPY CE  G    F                 
Sbjct: 67  PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF----------------- 109
Query: 156 SQRSNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAH 198
           S  S+   H+  TH N+K Y C    C K +     L  H+K  H
Sbjct: 110 SNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC--DICNATFIYPEHFKKHRRIHTGEKPYVC 234
           C+   + FK + +L  H++  HTGE+P++C  + C  ++   E+ K H R HTGEKPY+C
Sbjct: 42  CSRELRPFKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC 100
Query: 235 E 235
           E
Sbjct: 101 E 101

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 76  CGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQ 135
           C + F    NL+ H+ +HTG +PF CR+C ++F +   +  H RTHTGEKP+ C+ CG +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 136 F 136
           F
Sbjct: 72  F 72

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           P  SC + F ++  LD HI+  HTG++P+QC IC   F       +H R HTGEKP+ C+
Sbjct: 8   PVESCDRRFSQKTNLDTHIRI-HTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACD 66
Query: 236 V 236
           +
Sbjct: 67  I 67

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 69  KDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQ 128
           K+F+C  CG+ F    NL +H   HT  RP+ C +C K+F R+  ++DH   H+ EKP++
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 129 CEFCGAQF 136
           C+ CG  F
Sbjct: 76  CQECGKGF 83

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLS 156
           + FIC+ CG+ F +   +  HERTHT E+PY C+ C   FR                   
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFR------------------- 56
Query: 157 QRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYH 193
           ++ +L+ H R  H  +K + C  C K F + R L  H
Sbjct: 57  RQDHLRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVH 92

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
           K + C  C + F +   L  H +  HT ERPY CDIC+  F   +H + HR IH+ EKP+
Sbjct: 16  KEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 233 VCE 235
            C+
Sbjct: 75  KCQ 77

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 66  SGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK 125
           SG K + C +CGK+F      + H+++H G RP+ C VCGK F  K  +  H + HTG K
Sbjct: 6   SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 126 PYQCEFCGAQFRFKGS 141
           PY+C  C  +F ++ S
Sbjct: 65  PYECNICAKRFMWRDS 80

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
            DK YPC  C K+F  +   D H+ + H G RPY C +C   F    H   H +IHTG K
Sbjct: 7   GDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 231 PYVCEVRLAVFYY 243
           PY C +    F +
Sbjct: 65  PYECNICAKRFMW 77

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           DK Y C  C  +F+ +  L  H K  HTGE+PY+C+IC A F  P + K H RIH+GEKP
Sbjct: 15  DKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 66  SGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE- 124
           SGS    C  CGK F  + +L  H   H+G +P+ C VCG  F RK  +  H R+H G  
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 125 -KPYQCEFCGAQF 136
            KPY C+ CG  F
Sbjct: 63  GKPYICQSCGKGF 75

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 18/107 (16%)
Query: 94  TGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLC 153
           +G+    C +CGK F     +  H+ +H+GEKPY C  CG +F+ K        D++   
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRK--------DRMSY- 53
Query: 154 FLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTG 200
                 +++SH  +     K Y C SC K F R   L+ HIK  H+G
Sbjct: 54  ------HVRSHDGSV---GKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGE--KPYVC 234
           C  C K F+    L+ H K +H+GE+PY C +C   F   +    H R H G   KPY+C
Sbjct: 10  CEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 235 E 235
           +
Sbjct: 69  Q 69

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 42  PFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
           P  CE C K F  +  L  H + H+G K + C  C  A     +L  HL +H+  RPF C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 102 RVCGKSFVRKAEVKDHERTHTGE 124
           ++C  +    +++  H R+HTG+
Sbjct: 68  QICPYASRNSSQLTVHLRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 21/104 (20%)
Query: 98  PFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQ 157
           P  C VCGK F RK ++K H R HTG KPY+C+ C                       + 
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYA-------------------AAD 48
Query: 158 RSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
            S+L  H R  H +++ + C  CP A +    L  H++ +HTG+
Sbjct: 49  SSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVHLR-SHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
           C  C K F R+  L  H++  HTG +PY+C  C+          KH RIH+ E+P+ C++
Sbjct: 11  CEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 71  FVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
           + C ECGK+F    +L  H   HTG +P+ C  CGK+F++++ +  H R HTG  P
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           +RY C  C K+F     L  H +  HTGE+PY+CD C   FI   H   H R+HTG  P
Sbjct: 17  RRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 69  KDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGE 124
           K ++C+  +CG A+     L+ HL+ HTG +PF C+   C K F     +  H  THTGE
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 61
Query: 125 KPYQCEFCGAQFRF 138
           K + C+  G   RF
Sbjct: 62  KNFTCDSDGCDLRF 75

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 173 KRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPYQC--DICNATFIYPEHFKKHRRIHTG 228
           KRY C+   C  A+ +   L  H+ + HTGE+P+ C  + C   F    H  +H   HTG
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHL-SKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 60
Query: 229 EKPYVCE 235
           EK + C+
Sbjct: 61  EKNFTCD 67

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 69  KDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHT 122
           K + C ECGKAF     L  H  VHTG +P+ C  CGK+F + + + +H+R HT
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHT 227
           +K Y C  C KAF R  +L  H +  HTGE+PY+C  C   F        H+RIHT
Sbjct: 12  EKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQF 136
           +PF CR+C ++F R   +  H RTHTGEKP+ C+ CG +F
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF 41

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRI 225
           K + C  C + F R   L  HI+  HTGE+P+ CDIC   F   +  K+HR I
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDI 53

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 66  SGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK 125
            G   ++C  C +++  L +L  H  +H+  + + CR C K F        HE  HTGE+
Sbjct: 18  DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGER 77
Query: 126 PYQCEFCGAQF 136
            YQC  CG  F
Sbjct: 78  RYQCLACGKSF 88

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 95  GNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCF 154
           G   +IC VC +S+V    ++ H   H+ EK Y C +C   F          I       
Sbjct: 19  GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH------ 72
Query: 155 LSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
                         H  ++RY C +C K+F   + +  HIK+ H+ +
Sbjct: 73  --------------HTGERRYQCLACGKSFINYQFMSSHIKSVHSQD 105

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 19 CKKTFVSKYTYKAHLVTHTDRKRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTEC 76
          C K +      KAHL THT  K P+ C  E CD  F     L +H + H+G+K F C  C
Sbjct: 23 CTKVYTKSSHLKAHLRTHTGEK-PYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81
Query: 77 GKAFGTLRNLEVHLAVH 93
           ++F    +L +H+  H
Sbjct: 82 NRSFSRSDHLALHMKRH 98

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 165 KRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC--DICNATFIYPEHFKKH 222
           KR  H+ D  YP   C K + +   L  H++  HTGE+PY+C  + C+  F   +   +H
Sbjct: 12  KRRIHYCD--YP--GCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDELTRH 66
Query: 223 RRIHTGEKPYVCEV 236
            R HTG KP+ C V
Sbjct: 67  YRKHTGAKPFQCGV 80

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 104 CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQS 163
           CGK++ + + +K H RTHTGEKPY C++ G  ++F                 ++   L  
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKF-----------------ARSDELTR 56
Query: 164 HKRATHFNDKRYPCTSCPKAFKRRRLLDYHIK 195
           H R  H   + + C  C +AF R   L  H+K
Sbjct: 57  HYRK-HTGHRPFQCQKCDRAFSRSDHLALHMK 87

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 179 SCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCE 235
            C K + +   L  H++  HTGE+PY CD   C   F   +   +H R HTG +P+ C+
Sbjct: 13  GCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ 70

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 104 CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQS 163
           CGK++ + + +K H RTHTGEKPY C++ G  ++F                 ++   L  
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKF-----------------ARSDELTR 55
Query: 164 HKRATHFNDKRYPCTSCPKAFKRRRLLDYHIK 195
           H R  H   + + C  C +AF R   L  H+K
Sbjct: 56  HYRK-HTGHRPFQCQKCDRAFSRSDHLALHMK 86

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 179 SCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCE 235
            C K + +   L  H++  HTGE+PY CD   C   F   +   +H R HTG +P+ C+
Sbjct: 12  GCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ 69

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 99  FICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQF 136
           F+C VC ++F R+  +K H R+HT EKPY C  C   F
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAF 40

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 76  CGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHT 122
           C + F     L  H+ +HTG +PF CR+C ++F R   +  H RTHT
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHT 227
           P  SC + F R   L  HI+  HTG++P+QC IC   F   +H   H R HT
Sbjct: 23  PVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           E+PY C+ C  +FI   H  +HRRIHTGEKP
Sbjct: 10  EKPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2EP0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 528- 560) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           E+PY+CD+C+ +F Y      H+RIHTGEKP
Sbjct: 10  EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 96  NRPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
            +P+ C+VC K+F +KA +  H++THTGEKP
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           E+PY+C +C+  F    H  +H++ HTGEKP
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 86  LEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRF 138
           +  H+  H G        CGK++ + + +K H RTHTGEKP+ C + G + RF
Sbjct: 15  IRSHICSHPG--------CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRF 59

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 40 KRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRP 98
          +RPF C  C K++     L +H + H G +   C ECGK F     +  HL VH  N+P
Sbjct: 2  ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ-NKP 59

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           ERP++C+ C  +FI   H  +H+RIHTGEKP
Sbjct: 10  ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 95  GNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFC 132
           G+    C  CGK F     +  H RTHTGEKPY+CEFC
Sbjct: 1   GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFC 38

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
           RP+IC VCGK+F  ++ +  H++ HTGEKP
Sbjct: 11  RPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           E+PY C+ C   FI+    ++H+RIHTGEKP
Sbjct: 10  EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2EQW|A Chain A, Solution Structure Of The 6th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 484 Length = 42

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 94  TGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
           +G +P++C  CGK+F+RK+    HER HTGE
Sbjct: 6   SGEKPYVCTECGKAFIRKSHFITHERIHTGE 36

>pdb|2EP2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 603- 635) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 96  NRPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
            +P+ C +CGKSF +K+++  H++ HTGEKP
Sbjct: 10  EKPYECSICGKSFTKKSQLHVHQQIHTGEKP 40

>pdb|2ENA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 311- 343) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 196 AAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           ++ T E+P++CD C+ +F        HR IHTGEKP
Sbjct: 5   SSGTAEKPFRCDTCDKSFRQRSALNSHRMIHTGEKP 40

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
           +P+ C  CGK+F +KA +  H+R HTGEKP
Sbjct: 11  KPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 176 PCT--SCPKAFKRRRLLDYHIKAAHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKP 231
           PC    C + F  R+ L++H K  H  ++ + C    C  +F + +H K+H ++H+  + 
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 232 YVCE 235
           Y+CE
Sbjct: 69  YICE 72

>pdb|2EN6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 887- 919) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
           +P+ C  CGK+F +K+ +  H+RTHTGEKP
Sbjct: 11  KPYGCNECGKTFSQKSILSAHQRTHTGEKP 40

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 96  NRPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
            +P++C  CGK+F   AE+  H+R HTGEKP
Sbjct: 10  EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|2YTI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 564- 596) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           E+PY+C+ C   F    H  +HR IHTGEKP
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	275
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-55
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-52
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-42
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-40
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-38
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-38
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-27
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-24
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-37
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-34
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-22
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-33
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-33
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-22
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-32
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-31
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-22
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-31
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-29
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-31
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-30
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-29
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-30
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-30
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-29
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-28
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-27
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-26
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-18
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-25
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-23
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-20
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-22
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-22
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-20
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-18
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-14
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-14
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-13
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-13
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-13
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-13
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-12
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-12
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-12
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	6e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-09
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	9e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	6e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	5e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	2e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  176 bits (448), Expect = 2e-55
 Identities = 78/210 (37%), Positives = 113/210 (53%), Gaps = 22/210 (10%)

Query: 22  TFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFG 81
           +     +  A        K P++C +C KSF    +L +H++TH+G K + C ECGK+F 
Sbjct: 2   SEFGSSSSVAQAALEPGEK-PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS 60

Query: 82  TLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGS 141
             ++L  H   HTG +P+ C  CGKSF ++A ++ H+RTHTGEKPY C  CG  F     
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSF----- 115

Query: 142 SGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
                         SQ ++L++H+R TH  +K Y C  C K+F R   L  H +  HTGE
Sbjct: 116 --------------SQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTH-QRTHTGE 159

Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
           +PY+C  C  +F   +    H+R HTG+K 
Sbjct: 160 KPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  166 bits (424), Expect = 9e-52
 Identities = 73/184 (39%), Positives = 98/184 (53%), Gaps = 21/184 (11%)

Query: 51  SFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVR 110
           S +   + V       G K + C ECGK+F    +L  H   HTG +P+ C  CGKSF  
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 111 KAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHF 170
           K ++  H+RTHTGEKPY+C  CG  F                   SQR+NL++H+R TH 
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSF-------------------SQRANLRAHQR-THT 101

Query: 171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
            +K Y C  C K+F +   L  H +  HTGE+PY+C  C  +F   ++   H+R HTGEK
Sbjct: 102 GEKPYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK 160

Query: 231 PYVC 234
           PY C
Sbjct: 161 PYKC 164

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  141 bits (358), Expect = 5e-42
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)

Query: 59  VQHEKTHSGSKDFVC--TECGKAFGTLRNLEVHLAVHTGNRPFIC--RVCGKSFVRKAEV 114
           +  +      K ++C   +CG A+     L+ HL  HTG +PF C    C K F     +
Sbjct: 1   MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60

Query: 115 KDHERTHTGEKPYQCE--FCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFND 172
             H  THTGEK + C+   C  +F                   + ++N++ H      N 
Sbjct: 61  TRHSLTHTGEKNFTCDSDGCDLRF-------------------TTKANMKKHFN-RFHNI 100

Query: 173 KRYP--CTS--CPKAFKRRRLLDYHIKAAHTGERPYQC--DICNATFIYPEHFKKHRRIH 226
           K     C    C KAFK+   L  H + +HT + PY+C  + C+  F  P   K+H ++H
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

Query: 227 TGEKPYVCE 235
            G      +
Sbjct: 160 AGYPCKKDD 168

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  138 bits (349), Expect = 1e-40
 Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 33/208 (15%)

Query: 4   HLVSHTGARPYECKT--CKKTFVSKYTYKAHLVTHTDRKRPFSCE--KCDKSFYTQQNLV 59
                   + Y C    C   +   +  +AHL  HT  K PF C+   C+K F +  +L 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEK-PFPCKEEGCEKGFTSLHHLT 61

Query: 60  QHEKTHSGSKDFVCTE--CGKAFGTLRNLEVHLAVHTGNR--PFICRV--CGKSFVRKAE 113
           +H  TH+G K+F C    C   F T  N++ H       +   ++C    CGK+F +  +
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 114 VKDHERTHTGEKPYQC--EFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFN 171
           +K H+ +HT + PY+C  E C  +F                   S  S L+ H++  H  
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRF-------------------SLPSRLKRHEK-VHAG 161

Query: 172 DKRYPCTSCPKAFKRRRLLDYHIKAAHT 199
                  SC    K   L   H+   H 
Sbjct: 162 YPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  131 bits (333), Expect = 3e-38
 Identities = 52/210 (24%), Positives = 69/210 (32%), Gaps = 35/210 (16%)

Query: 31  AHLVTHTDRKRPFSCEK--CDKSFYTQQNLVQHEKTHSGSKDFVCTE--CGKAFGTLRNL 86
                    K  + C    C  ++     L  H   H+G K F C E  C K F +L +L
Sbjct: 2   GEKALPVVYK-RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60

Query: 87  EVHLAVHTGNRPFIC--RVCGKSFVRKAEVKDHERTHTGEK--PYQCEF--CGAQFRFKG 140
             H   HTG + F C    C   F  KA +K H       K   Y C F  CG  F    
Sbjct: 61  TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAF---- 116

Query: 141 SSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAH 198
                           + + L+ H+  +H     Y C    C K F     L  H K  H
Sbjct: 117 ---------------KKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VH 159

Query: 199 TGERPYQCDICNATF-IYPEHFKKHRRIHT 227
            G    + D C+     +  + K     H 
Sbjct: 160 AGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  130 bits (328), Expect = 7e-38
 Identities = 54/202 (26%), Positives = 73/202 (36%), Gaps = 62/202 (30%)

Query: 41  RPFSCEKCDKSFYTQQNLVQH---EKTHSGSKDFVCTECG-----KAFGTLRNLEVHLAV 92
                + C + F +Q+ LV H   E  H   K+FVC   G     + F     L VH+  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 93  HTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEF--CGAQFRFKGSSGTESID 148
           HTG +P  C    C KS+ R   +K H R+HTGEKPY CE   C   F            
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF------------ 109

Query: 149 KLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI 208
                  S  S+   H+  T                             H+ E+PY C +
Sbjct: 110 -------SNASDRAKHQNRT-----------------------------HSNEKPYVCKL 133

Query: 209 --CNATFIYPEHFKKHRRIHTG 228
             C   +  P   +KH +   G
Sbjct: 134 PGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  102 bits (256), Expect = 3e-27
 Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 51/169 (30%)

Query: 8   HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
           H   + + C                            C +  + F  Q  LV H + H+G
Sbjct: 29  HGERKEFVCHWG------------------------GCSRELRPFKAQYMLVVHMRRHTG 64

Query: 68  SKDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFIC--RVCGKSFVRKAEVKDH-ERTHT 122
            K   CT   C K++  L NL+ HL  HTG +P++C    C K+F   ++   H  RTH+
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 123 GEKPYQCEF--CGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
            EKPY C+   C  ++                   +  S+L+ H + T 
Sbjct: 125 NEKPYVCKLPGCTKRY-------------------TDPSSLRKHVK-TV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 93.4 bits (233), Expect = 6e-24
 Identities = 32/144 (22%), Positives = 47/144 (32%), Gaps = 49/144 (34%)

Query: 97  RPFICRVCGKSFVRKAEVKDH---ERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLC 153
                  C + F  + ++  H   E  H   K + C + G     +              
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELR-------------P 48

Query: 154 FLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNA 211
           F   +  L  H R                               HTGE+P++C    C  
Sbjct: 49  F-KAQYMLVVHMRR------------------------------HTGEKPHKCTFEGCRK 77

Query: 212 TFIYPEHFKKHRRIHTGEKPYVCE 235
           ++   E+ K H R HTGEKPY+CE
Sbjct: 78  SYSRLENLKTHLRSHTGEKPYMCE 101

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 4   HLVSHTGARPYECK--TCKKTFVSKYTYKAHLV-THTDRKRPFSCEK--CDKSFYTQQNL 58
           HL SHTG +PY C+   C K F +      H   TH++ K P+ C+   C K +    +L
Sbjct: 88  HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK-PYVCKLPGCTKRYTDPSSL 146

Query: 59  VQHEKTHSG 67
            +H KT  G
Sbjct: 147 RKHVKTVHG 155

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  128 bits (323), Expect = 3e-37
 Identities = 45/201 (22%), Positives = 66/201 (32%), Gaps = 62/201 (30%)

Query: 47  KCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPF------- 99
               S    +  +  +             C + F T+  L  H+ +     P        
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 100 --ICRVCGKSFVRKAEVKDHERTHTGEKPYQCEF--CGAQFRFKGSSGTESIDKLLLCFL 155
              C   GKSF  K ++ +H R HTGEKP+ C F  CG  F                   
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF------------------- 102

Query: 156 SQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATF 213
           ++  NL+ HKR                               HTGE+P++C+   C+  F
Sbjct: 103 ARSENLKIHKR------------------------------THTGEKPFKCEFEGCDRRF 132

Query: 214 IYPEHFKKHRRIHTGEKPYVC 234
                 KKH  +HT +K    
Sbjct: 133 ANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  119 bits (301), Expect = 7e-34
 Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 37/174 (21%)

Query: 21  KTFVSKYTYKAHLV---THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFV----- 72
            +  S    K  L        +      + CD++F T   LV H                
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQL-SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 73  ----CTECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKP 126
               C   GK+F     L  H+ VHTG +PF C    CGK F R   +K H+RTHTGEKP
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120

Query: 127 YQCEF--CGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCT 178
           ++CEF  C  +F                   +  S+ + H    H +DK  P +
Sbjct: 121 FKCEFEGCDRRF-------------------ANSSDRKKHMH-VHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 89.3 bits (222), Expect = 3e-22
 Identities = 36/139 (25%), Positives = 48/139 (34%), Gaps = 42/139 (30%)

Query: 4   HLVSHTGARPY---------ECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYT 54
           H+       P          EC    K+F +KY                           
Sbjct: 44  HVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY--------------------------- 76

Query: 55  QQNLVQHEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVR 110
              LV H + H+G K F C    CGK F    NL++H   HTG +PF C    C + F  
Sbjct: 77  --KLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFAN 134

Query: 111 KAEVKDHERTHTGEKPYQC 129
            ++ K H   HT +K    
Sbjct: 135 SSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 53.4 bits (129), Expect = 4e-09
 Identities = 6/56 (10%), Positives = 13/56 (23%), Gaps = 2/56 (3%)

Query: 182 KAFKRRRLLDYHI--KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +    + +   +  K     +       C+ TF        H  +     P    
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN 57

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  117 bits (297), Expect = 1e-33
 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 23/137 (16%)

Query: 36  HTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVH---LAV 92
            +       C  C K F ++  L  H + H+G K F C +CGK +    NL  H     +
Sbjct: 2   SSGSS-GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLL 152
           +   + F C VC ++F R+ E++ H  +HTGE PY+C  C  QF                
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQF---------------- 104

Query: 153 CFLSQRSNLQSHKRATH 169
               Q+ +LQSH    H
Sbjct: 105 ---MQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  116 bits (294), Expect = 4e-33
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 23/141 (16%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLL 152
            +G+    C  C K F+ K  +K H R HTGEKP++C  CG  +                
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCY---------------- 45

Query: 153 CFLSQRSNLQSHKR--ATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICN 210
               ++ NL  H+     + +++ + C+ C + F+RR  L  H+ + HTGE PY+C  C+
Sbjct: 46  ---FRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS-HTGEMPYKCSSCS 101

Query: 211 ATFIYPEHFKKH-RRIHTGEK 230
             F+  +  + H  ++H+G  
Sbjct: 102 QQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 87.9 bits (219), Expect = 3e-22
 Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 27/119 (22%)

Query: 8   HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
           HTG +P+EC  C K +      K +L+ H                            +  
Sbjct: 30  HTGEKPFECPKCGKCY----FRKENLLEHE----------------------ARNCMNRS 63

Query: 68  SKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDH-ERTHTGEK 125
            + F C+ C + F     L +H+  HTG  P+ C  C + F++K +++ H  + H+G  
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             +G    +C  C+  F+   + K H R HTGEKP+ C
Sbjct: 1   GSSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFEC 38

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDR 39
           H+VSHTG  PY+C +C + F      K  L +H  +
Sbjct: 85  HMVSHTGEMPYKCSSCSQQF----MQKKDLQSHMIK 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  113 bits (285), Expect = 6e-32
 Identities = 48/170 (28%), Positives = 62/170 (36%), Gaps = 56/170 (32%)

Query: 69  KDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
           +   C    C K F     +  HL  H G R  +C  CGK+FV  +++K H+  HTGEKP
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 127 YQCEF--CGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAF 184
           +QC F  CG +F                   S   NL++H R                  
Sbjct: 63  FQCTFEGCGKRF-------------------SLDFNLRTHVRI----------------- 86

Query: 185 KRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPY 232
                        HTG+RPY C    CN  F    + K H   H   K  
Sbjct: 87  -------------HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  111 bits (279), Expect = 5e-31
 Identities = 48/173 (27%), Positives = 64/173 (36%), Gaps = 56/173 (32%)

Query: 39  RKRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGN 96
             R  +C  + C K F     + +H  TH G +  VC ECGKAF     L+ H  VHTG 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE 60

Query: 97  RPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEF--CGAQFRFKGSSGTESIDKLLL 152
           +PF C    CGK F     ++ H R HTG++PY C F  C  +F                
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF---------------- 104

Query: 153 CFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQ 205
              +Q +NL+SH                                 H   +  Q
Sbjct: 105 ---AQSTNLKSHIL------------------------------THAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 90.3 bits (225), Expect = 5e-23
 Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 36/132 (27%)

Query: 4   HLVSHT---GARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQ 60
            +  H    G R + C                               C K+F     L +
Sbjct: 22  AMRKHLHTHGPRVHVCAE-----------------------------CGKAFVESSKLKR 52

Query: 61  HEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKD 116
           H+  H+G K F CT   CGK F    NL  H+ +HTG+RP++C    C K F +   +K 
Sbjct: 53  HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS 112

Query: 117 HERTHTGEKPYQ 128
           H  TH   K  Q
Sbjct: 113 HILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 88.7 bits (221), Expect = 2e-22
 Identities = 35/142 (24%), Positives = 49/142 (34%), Gaps = 54/142 (38%)

Query: 97  RPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCF 154
           R   C    C K F   + ++ H  TH G + + C  CG  F                  
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAF------------------ 44

Query: 155 LSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNAT 212
             + S L+ H+                                HTGE+P+QC    C   
Sbjct: 45  -VESSKLKRHQLV------------------------------HTGEKPFQCTFEGCGKR 73

Query: 213 FIYPEHFKKHRRIHTGEKPYVC 234
           F    + + H RIHTG++PYVC
Sbjct: 74  FSLDFNLRTHVRIHTGDRPYVC 95

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 43.3 bits (103), Expect = 8e-06
 Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 3/37 (8%)

Query: 201 ERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCE 235
            R   C    C   F      +KH   H G + +VC 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA 38

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  111 bits (280), Expect = 3e-31
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 26/135 (19%)

Query: 41  RPFSCE--KCDKSFYTQQNLVQHEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTGN 96
           RPF C    C+K ++   +L  H + H+G K + C   +C + F     L+ H   HTG 
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEF--CGAQFRFKGSSGTESIDKLLLCF 154
           +PF C+ C + F R   +K H RTHTGEKP+ C +  C  +F                  
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF------------------ 106

Query: 155 LSQRSNLQSHKRATH 169
            ++   L  H    H
Sbjct: 107 -ARSDELVRHHN-MH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  106 bits (267), Expect = 3e-29
 Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 27/139 (19%)

Query: 94  TGNRPFIC--RVCGKSFVRKAEVKDHERTHTGEKPYQCEF--CGAQFRFKGSSGTESIDK 149
           +  RPF+C    C K + + + ++ H R HTGEKPYQC+F  C  +F             
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRF------------- 48

Query: 150 LLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI- 208
                 S+   L+ H+R  H   K + C +C + F R   L  H +  HTGE+P+ C   
Sbjct: 49  ------SRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRT-HTGEKPFSCRWP 100

Query: 209 -CNATFIYPEHFKKHRRIH 226
            C   F   +   +H  +H
Sbjct: 101 SCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 81.0 bits (201), Expect = 1e-19
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 29/120 (24%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
           H   HTG +PY+C                             + C++ F     L +H++
Sbjct: 27  HSRKHTGEKPYQC---------------------------DFKDCERRFSRSDQLKRHQR 59

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTH 121
            H+G K F C  C + F    +L+ H   HTG +PF CR   C K F R  E+  H   H
Sbjct: 60  RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.1 bits (139), Expect = 8e-11
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 199 TGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCEVR 237
           + +RP+ C    CN  +    H + H R HTGEKPY C+ +
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFK 42

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  110 bits (277), Expect = 6e-31
 Identities = 28/150 (18%), Positives = 46/150 (30%), Gaps = 49/150 (32%)

Query: 85  NLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGT 144
                       + FIC+ CG+ F +   +  HERTHT E+PY C+ C   F        
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF-------- 55

Query: 145 ESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPY 204
                       ++ +L+ H+                                H+ E+P+
Sbjct: 56  -----------RRQDHLRDHRYI------------------------------HSKEKPF 74

Query: 205 QCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
           +C  C   F        H+ +H        
Sbjct: 75  KCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  109 bits (274), Expect = 2e-30
 Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 20/123 (16%)

Query: 57  NLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKD 116
                       K+F+C  CG+ F    NL +H   HT  RP+ C +C K+F R+  ++D
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
           H   H+ EKP++C+ CG  F                    Q   L  HK   H       
Sbjct: 64  HRYIHSKEKPFKCQECGKGF-------------------CQSRTLAVHKT-LHMQTSSPT 103

Query: 177 CTS 179
             S
Sbjct: 104 AAS 106

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  107 bits (269), Expect = 1e-29
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 32  HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLA 91
             +    +K  F C+ C + F    NL+ HE+TH+  + + C  C KAF    +L  H  
Sbjct: 8   GRLPSKTKK-EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66

Query: 92  VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
           +H+  +PF C+ CGK F +   +  H+  H        
Sbjct: 67  IHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.1 bits (217), Expect = 4e-22
 Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 49/119 (41%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
                  +K + C+FCG  F                   ++  NL  H+R          
Sbjct: 8   GRLPSKTKKEFICKFCGRHF-------------------TKSYNLLIHERT--------- 39

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
                                HT ERPY CDIC+  F   +H + HR IH+ EKP+ C+
Sbjct: 40  ---------------------HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 37.4 bits (88), Expect = 7e-04
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
           H   H+  +P++C+ C K F    T   H   H       + 
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS-SPTA 104

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  109 bits (275), Expect = 1e-30
 Identities = 36/142 (25%), Positives = 47/142 (33%), Gaps = 49/142 (34%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLL 152
              + P  C VCGK F RK ++K H R HTG KPY+C+ C                    
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA---------------- 46

Query: 153 CFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNAT 212
              +  S+L  H R                               H+ ERP++C IC   
Sbjct: 47  ---ADSSSLNKHLRI------------------------------HSDERPFKCQICPYA 73

Query: 213 FIYPEHFKKHRRIHTGEKPYVC 234
                    H R HTG+     
Sbjct: 74  SRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  108 bits (273), Expect = 2e-30
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 35  THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHT 94
           +      P  CE C K F  +  L  H + H+G K + C  C  A     +L  HL +H+
Sbjct: 2   SSGSSG-PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60

Query: 95  GNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             RPF C++C  +    +++  H R+HTG+     
Sbjct: 61  DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 99.8 bits (250), Expect = 5e-27
 Identities = 28/143 (19%), Positives = 44/143 (30%), Gaps = 49/143 (34%)

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
           +   S    C  CGK F     L+ H+  HTG +P+ C+ C  +    + +  H R H+ 
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 124 EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKA 183
           E+P++C+ C                          S L  H R                 
Sbjct: 62  ERPFKCQICPYAS-------------------RNSSQLTVHLR----------------- 85

Query: 184 FKRRRLLDYHIKAAHTGERPYQC 206
                        +HTG+     
Sbjct: 86  -------------SHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 80.2 bits (199), Expect = 1e-19
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 49/116 (42%)

Query: 120 THTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTS 179
           +     P++CE CG  F                   S++  L++H R             
Sbjct: 2   SSGSSGPHKCEVCGKCF-------------------SRKDKLKTHMRC------------ 30

Query: 180 CPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
                             HTG +PY+C  C+          KH RIH+ E+P+ C+
Sbjct: 31  ------------------HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 65.1 bits (160), Expect = 6e-14
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
          HTG +PY+CKTC        +   HL  H+D + PF C+ C  +      L  H ++H+G
Sbjct: 31 HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER-PFKCQICPYASRNSSQLTVHLRSHTG 89

Query: 68 SKDFVC 73
                
Sbjct: 90 DSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
          HL  H+  RP++C+ C     +      HL +HT      S 
Sbjct: 55 HLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDS-GPSS 95

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  105 bits (265), Expect = 4e-29
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 4/107 (3%)

Query: 35  THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHT 94
             +  K  + C+ C KSF  +    +H   H G + + C  CGK F    +L  H+ +HT
Sbjct: 4   GSSGDK-LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 95  GNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGS 141
           G +P+ C +C K F+ +     H    +  K Y+             
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  102 bits (257), Expect = 6e-28
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 24/117 (20%)

Query: 118 ERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPC 177
               +G+K Y C+ CG  F                   + +S    H    H   + Y C
Sbjct: 2   SSGSSGDKLYPCQ-CGKSF-------------------THKSQRDRHMS-MHLGLRPYGC 40

Query: 178 TSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             C K FK +  L  H+K  HTG +PY+C+IC   F++ + F  HR + +  K Y  
Sbjct: 41  GVCGKKFKMKHHLVGHMKI-HTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEA 94

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 99.8 bits (250), Expect = 6e-27
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 23/126 (18%)

Query: 62  EKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTH 121
               SG K + C +CGK+F      + H+++H G RP+ C VCGK F  K  +  H + H
Sbjct: 2   SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 122 TGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCP 181
           TG KPY+C  C  +F                     R +   H+       K Y      
Sbjct: 61  TGIKPYECNICAKRF-------------------MWRDSF--HRH-VTSCTKSYEAAKAE 98

Query: 182 KAFKRR 187
           +     
Sbjct: 99  QNTTEA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 96.7 bits (242), Expect = 1e-25
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 24/122 (19%)

Query: 92  VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLL 151
             +G++ + C+ CGKSF  K++   H   H G +PY C  CG +F               
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF--------------- 47

Query: 152 LCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNA 211
                 + +L  H +  H   K Y C  C K F  R     H+    +  + Y+      
Sbjct: 48  ----KMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSFHRHV---TSCTKSYEAAKAEQ 99

Query: 212 TF 213
             
Sbjct: 100 NT 101

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 70.5 bits (174), Expect = 8e-16
 Identities = 23/104 (22%), Positives = 32/104 (30%), Gaps = 31/104 (29%)

Query: 8   HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
           H G RPY C  C K F                          K      +LV H K H+G
Sbjct: 32  HLGLRPYGCGVCGKKF------------------------KMKH-----HLVGHMKIHTG 62

Query: 68  SKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRK 111
            K + C  C K F    +   H  V +  + +      ++    
Sbjct: 63  IKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEA 104

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 96.4 bits (241), Expect = 8e-26
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 41  RPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRP 98
           RP++C  E CD+ F    +L +H + H+G K F C  C + F    +L  H+  HTG +P
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 99  FICRVCGKSFVRKAEVKDHERTHTGEK 125
           F C +CG+ F R  E K H + H  +K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 94.8 bits (237), Expect = 4e-25
 Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 51/136 (37%)

Query: 97  RPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCF 154
           RP+ C V  C + F +   +  H R HTG+KP+QC  C   F                  
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF------------------ 44

Query: 155 LSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFI 214
            S+  +L +H R                               HTGE+P+ CDIC   F 
Sbjct: 45  -SRSDHLTTHIRT------------------------------HTGEKPFACDICGRKFA 73

Query: 215 YPEHFKKHRRIHTGEK 230
             +  K+H +IH  +K
Sbjct: 74  RSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 90.6 bits (226), Expect = 1e-23
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 22/103 (21%)

Query: 69  KDFVC--TECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
           + + C    C + F    +L  H+ +HTG +PF CR+C ++F R   +  H RTHTGEKP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 127 YQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
           + C+ CG +F                   ++    + H +  H
Sbjct: 63  FACDICGRKF-------------------ARSDERKRHTK-IH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 77.5 bits (192), Expect = 1e-18
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 12 RPYECKT--CKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
          RPY C    C + F    +   H+  HT +K PF C  C ++F    +L  H +TH+G K
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQK-PFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 70 DFVCTECGKAFGTLRNLEVHLAVHTG 95
           F C  CG+ F      + H  +H  
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 69.4 bits (171), Expect = 1e-15
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 173 KRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
           + Y C    C + F +   L  HI+  HTG++P+QC IC   F   +H   H R HTGEK
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 231 PYVCE 235
           P+ C+
Sbjct: 62  PFACD 66

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 63.6 bits (156), Expect = 2e-13
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
          H+  HTG +P++C+ C + F        H+ THT  K PF+C+ C + F       +H K
Sbjct: 25 HIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK-PFACDICGRKFARSDERKRHTK 83

Query: 64 THSGSKD 70
           H   KD
Sbjct: 84 IHLRQKD 90

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 94.1 bits (235), Expect = 5e-25
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 57  NLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG----NRPFICRVCGKSFVRKA 112
           +     +TH+G K + C+ C K F   + L++H   +         F+C  CGK+F R+ 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 113 EVKDHERTHTGEKPYQCEFCGAQF 136
            +  H     G    + E  G   
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 83.0 bits (206), Expect = 1e-20
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHTD---RKRPFSCEKCDKSFYTQQNLVQHEKT 64
          HTG +PY C  C KTF  K     H   + D       F C KC K+F  +  + +H   
Sbjct: 10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN 69

Query: 65 HSGSKDFVCTECGKAFG 81
           +G         G + G
Sbjct: 70 CAGPDGVEGENSGPSSG 86

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 75.3 bits (186), Expect = 7e-18
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 25/101 (24%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH----FND 172
             RTHTGEKPY C  C   F                    Q+  L  H +  +    F  
Sbjct: 6   SGRTHTGEKPYACSHCDKTF-------------------RQKQLLDMHFK-RYHDPNFVP 45

Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF 213
             + C+ C K F RR  +  H      G    + +    + 
Sbjct: 46  AAFVCSKCGKTFTRRNTMARH-ADNCAGPDGVEGENSGPSS 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 94.5 bits (236), Expect = 5e-25
 Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 21/107 (19%)

Query: 65  HSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
            SGS    C  CGK F  + +L  H   H+G +P+ C VCG  F RK  +  H R+H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 125 --KPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
             KPY C+ CG  F                   S+  +L  H +  H
Sbjct: 62  VGKPYICQSCGKGF-------------------SRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 92.9 bits (232), Expect = 2e-24
 Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 22/112 (19%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLL 152
            +G+    C +CGK F     +  H+ +H+GEKPY C  CG +F                
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF---------------- 45

Query: 153 CFLSQRSNLQSHKRATHF--NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGER 202
               ++  +  H R +H     K Y C SC K F R   L+ HIK  H+G  
Sbjct: 46  ---KRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 91.4 bits (228), Expect = 8e-24
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 36  HTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
            +      +CE C K F    +L +H+ +HSG K + C  CG  F     +  H+  H G
Sbjct: 2   SSGSS-GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 96  --NRPFICRVCGKSFVRKAEVKDHE-RTHTGEK 125
              +P+IC+ CGK F R   +  H  + H+G  
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.5 bits (179), Expect = 1e-16
 Identities = 25/117 (21%), Positives = 34/117 (29%), Gaps = 51/117 (43%)

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSC 180
            +G     CE CG  F                       +L  HK +             
Sbjct: 2   SSGSSGVACEICGKIF-------------------RDVYHLNRHKLS------------- 29

Query: 181 PKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGE--KPYVCE 235
                            H+GE+PY C +C   F   +    H R H G   KPY+C+
Sbjct: 30  -----------------HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 61.7 bits (151), Expect = 9e-13
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
             +G     C+IC   F    H  +H+  H+GEKPY C 
Sbjct: 1   GSSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP 39

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 56.7 bits (138), Expect = 7e-11
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT-DRKRPFSCEKCDKSFYTQQNLVQHE 62
          H +SH+G +PY C  C   F  K     H+ +H     +P+ C+ C K F    +L  H 
Sbjct: 26 HKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI 85

Query: 63 K-THSGSK 69
          K  HSG  
Sbjct: 86 KQVHSGPS 93

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 88.6 bits (221), Expect = 5e-23
 Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 19/96 (19%)

Query: 71  FVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
           F C  CGK+F     L  HL +H+  RP+ C+ CGK F +K+++K H   HTGEKP++C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 131 FCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKR 166
            CG  F                   SQ SNL +H R
Sbjct: 62  VCGKAF-------------------SQSSNLITHSR 78

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 83.6 bits (208), Expect = 5e-21
 Identities = 31/81 (38%), Positives = 45/81 (55%)

Query: 43  FSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICR 102
           F C+ C KSF     L  H   HS ++ + C  CGK F    +++ H  +HTG +P  C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 103 VCGKSFVRKAEVKDHERTHTG 123
           VCGK+F + + +  H R HTG
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 80.2 bits (199), Expect = 1e-19
 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 49/128 (38%)

Query: 101 CRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSN 160
           C++CGKSF R + +  H   H+  +PY C++CG +F                    Q+S+
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF-------------------HQKSD 44

Query: 161 LQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFK 220
           ++ H                                 HTGE+P++C +C   F    +  
Sbjct: 45  MKKHTFI------------------------------HTGEKPHKCQVCGKAFSQSSNLI 74

Query: 221 KHRRIHTG 228
            H R HTG
Sbjct: 75  THSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 74.8 bits (185), Expect = 1e-17
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 14 YECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          ++CK C K+F    T   HL+ H+D + P+ C+ C K F+ + ++ +H   H+G K   C
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTR-PYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 74 TECGKAFGTLRNLEVHLAVHTG 95
            CGKAF    NL  H   HTG
Sbjct: 61 QVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 71.7 bits (177), Expect = 2e-16
 Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 175 YPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
           + C  C K+FKR   L  H    H+  RPY C  C   F      KKH  IHTGEKP+ C
Sbjct: 2   FDCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 235 E 235
           +
Sbjct: 61  Q 61

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 88.3 bits (220), Expect = 9e-23
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 4/88 (4%)

Query: 41  RPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFI 100
           +PF C  C ++F    +L  H +TH+G K F C  CG+ F      + H  +     P +
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPIL 60

Query: 101 CRVCGKSFVRK---AEVKDHERTHTGEK 125
                +   +           +   GE+
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 85.6 bits (213), Expect = 1e-21
 Identities = 26/137 (18%), Positives = 41/137 (29%), Gaps = 53/137 (38%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLS 156
           +PF CR+C ++F R   +  H RTHTGEKP+ C+ CG +F                   +
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF-------------------A 42

Query: 157 QRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYP 216
           +    + H+                                     P   D         
Sbjct: 43  RSDERKRHRD-IQ------------------------------HILPILEDKVEELLSKN 71

Query: 217 EHFKKHR---RIHTGEK 230
            H +      +   GE+
Sbjct: 72  YHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 82.2 bits (204), Expect = 2e-20
 Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 22/103 (21%)

Query: 69  KDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQ 128
           K F C  C + F    +L  H+  HTG +PF C +CG+ F R  E K H        P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60

Query: 129 CEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRA--TH 169
            +                         S+  +L++        
Sbjct: 61  EDKVEELL-------------------SKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
           K + C  C + F R   L  HI+  HTGE+P+ CDIC   F   +  K+HR I     P 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQH-ILPI 59

Query: 233 VCE 235
           + +
Sbjct: 60  LED 62

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 5/65 (7%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNL---VQHEKT 64
          HTG +P+ C  C + F      K H         P   +K ++      +L   V   K 
Sbjct: 26 HTGEKPFACDICGRKFARSDERKRHRDIQH--ILPILEDKVEELLSKNYHLENEVARLKK 83

Query: 65 HSGSK 69
            G +
Sbjct: 84 LVGER 88

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 86.7 bits (216), Expect = 2e-22
 Identities = 28/71 (39%), Positives = 36/71 (50%)

Query: 57  NLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKD 116
           +   H       K + C  C  +F    NL  H  VHTG +P+ C +CG  F R A +K 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 117 HERTHTGEKPY 127
           H R H+GEKPY
Sbjct: 64  HTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 85.6 bits (213), Expect = 7e-22
 Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 49/116 (42%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
           H      +KPY+C+ C A F                     + NL SHK           
Sbjct: 8   HSHMTHSDKPYKCDRCQASF-------------------RYKGNLASHKTV--------- 39

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
                                HTGE+PY+C+IC A F  P + K H RIH+GEKPY
Sbjct: 40  ---------------------HTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 74.4 bits (184), Expect = 1e-17
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 20/91 (21%)

Query: 85  NLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGT 144
           +   H  +   ++P+ C  C  SF  K  +  H+  HTGEKPY+C  CGAQF        
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF-------- 55

Query: 145 ESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
                      ++ +NL++H R  H  +K Y
Sbjct: 56  -----------NRPANLKTHTR-IHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLA 91
          H       K P+ C++C  SF  + NL  H+  H+G K + C  CG  F    NL+ H  
Sbjct: 8  HSHMTHSDK-PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

Query: 92 VHTGNRPF 99
          +H+G +P+
Sbjct: 67 IHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 61.7 bits (151), Expect = 7e-13
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
              ++PY+CD C A+F Y  +   H+ +HTGEKPY C 
Sbjct: 12  THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN 49

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
              +PY+C  C+ +F  K    +H   HT  K P+ C  C   F    NL  H + HSG
Sbjct: 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEK-PYRCNICGAQFNRPANLKTHTRIHSG 70

Query: 68 SK 69
           K
Sbjct: 71 EK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.8 bits (89), Expect = 2e-04
 Identities = 6/18 (33%), Positives = 9/18 (50%)

Query: 218 HFKKHRRIHTGEKPYVCE 235
           H   H  +   +KPY C+
Sbjct: 4   HHHHHSHMTHSDKPYKCD 21

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 86.8 bits (216), Expect = 3e-22
 Identities = 27/70 (38%), Positives = 36/70 (51%)

Query: 58  LVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDH 117
                  HSG K + C ECGKAF     L  H  VHTG +P+ C  CGK+F + + + +H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 118 ERTHTGEKPY 127
           +R HT     
Sbjct: 62  QRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 78.7 bits (195), Expect = 2e-19
 Identities = 29/116 (25%), Positives = 35/116 (30%), Gaps = 49/116 (42%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
               H+GEKPY C  CG  F                   S+ S L  H+R          
Sbjct: 5   SSGIHSGEKPYGCVECGKAF-------------------SRSSILVQHQRV--------- 36

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
                                HTGE+PY+C  C   F        H+RIHT     
Sbjct: 37  ---------------------HTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 69.4 bits (171), Expect = 8e-16
 Identities = 30/119 (25%), Positives = 41/119 (34%), Gaps = 49/119 (41%)

Query: 86  LEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTE 145
                 +H+G +P+ C  CGK+F R + +  H+R HTGEKPY+C  CG  F         
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF--------- 52

Query: 146 SIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPY 204
                     SQ S L +H+R                               HT     
Sbjct: 53  ----------SQNSGLINHQR------------------------------IHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 63.6 bits (156), Expect = 1e-13
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLA 91
              H+  K P+ C +C K+F     LVQH++ H+G K + C ECGKAF     L  H  
Sbjct: 5  SSGIHSGEK-PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

Query: 92 VHTGNRPF 99
          +HT     
Sbjct: 64 IHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           H+GE+PY C  C   F       +H+R+HTGEKPY C 
Sbjct: 9   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL 46

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 221 KHRRIHTGEKPYVCE 235
               IH+GEKPY C 
Sbjct: 4   GSSGIHSGEKPYGCV 18

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 86.0 bits (214), Expect = 5e-22
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 57  NLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKD 116
           +  + E      + + C ECGK+F    +L  H   HTG +P+ C  CGK+F++++ +  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 117 HERTHTGEKPY 127
           H R HTG  P 
Sbjct: 65  HHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.3 bits (202), Expect = 3e-20
 Identities = 29/116 (25%), Positives = 37/116 (31%), Gaps = 49/116 (42%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
            E      + Y+C+ CG  F                   S  S+L  H+R          
Sbjct: 9   SEWQQRERRRYKCDECGKSF-------------------SHSSDLSKHRRT--------- 40

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
                                HTGE+PY+CD C   FI   H   H R+HTG  P 
Sbjct: 41  ---------------------HTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.5 bits (179), Expect = 6e-17
 Identities = 31/120 (25%), Positives = 39/120 (32%), Gaps = 49/120 (40%)

Query: 85  NLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGT 144
           +           R + C  CGKSF   +++  H RTHTGEKPY+C+ CG  F        
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF-------- 56

Query: 145 ESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPY 204
                       QRS+L  H R                               HTG  P 
Sbjct: 57  -----------IQRSHLIGHHR------------------------------VHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.3 bits (150), Expect = 1e-12
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
               R Y+CD C  +F +     KHRR HTGEKPY C+
Sbjct: 13  QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD 50

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 2/18 (11%), Positives = 5/18 (27%)

Query: 218 HFKKHRRIHTGEKPYVCE 235
              +        + Y C+
Sbjct: 5   SSGRSEWQQRERRRYKCD 22

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 85.7 bits (213), Expect = 9e-22
 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 65  HSGSKDFVCT--ECGKAFGTLRNLEVHL-AVHTGNRPFIC--RVCGKSFVRKAEVKDHER 119
            SGS    C    CG+ F   + L  H    H   + F C    CGKSF  K  +K+H +
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 120 THTGEKPYQCEFCGAQF 136
            H+  + Y CEF G   
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 75.7 bits (187), Expect = 4e-18
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 8  HTGARPYECKT--CKKTFVSKYTYKAHL-VTHTDRKRPFSCE--KCDKSFYTQQNLVQHE 62
           +G+    C    C + F ++     H    H  +K  FSC    C KSF  +++L +H 
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK-SFSCPEPACGKSFNFKKHLKEHM 60

Query: 63 KTHSGSKDFVCTECGKAFG 81
          K HS ++D++C   G + G
Sbjct: 61 KLHSDTRDYICEFSGPSSG 79

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 75.7 bits (187), Expect = 4e-18
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 169 HFNDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCD--ICNATFIYPEHFKKHRR 224
                  PC    C + F  R+ L++H K  H  ++ + C    C  +F + +H K+H +
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 225 IHTGEKPYVCEV 236
           +H+  + Y+CE 
Sbjct: 62  LHSDTRDYICEF 73

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 24/97 (24%)

Query: 121 HTGEKPYQCEF--CGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCT 178
            +G     C+F  CG  F                   S R  L  HK+  H + K + C 
Sbjct: 2   SSGSSGMPCDFPGCGRIF-------------------SNRQYLNHHKKYQHIHQKSFSCP 42

Query: 179 --SCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF 213
             +C K+F  ++ L  H+K  H+  R Y C+    + 
Sbjct: 43  EPACGKSFNFKKHLKEHMKL-HSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 197 AHTGERPYQCDI--CNATFIYPEHFKKHRRI-HTGEKPYVCE 235
             +G     CD   C   F   ++   H++  H  +K + C 
Sbjct: 1   GSSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP 42

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 84.5 bits (210), Expect = 2e-21
 Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 20/91 (21%)

Query: 115 KDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRA-THFNDK 173
               RTH+GEKPY+C  C A+F                   +Q   ++ H       N  
Sbjct: 4   GSSGRTHSGEKPYECYICHARF-------------------TQSGTMKMHILQKHTENVA 44

Query: 174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPY 204
           ++ C  C     R+  L  H++  H+   P 
Sbjct: 45  KFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.4 bits (202), Expect = 3e-20
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 57  NLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG--NRPFICRVCGKSFVRKAEV 114
           +     +THSG K + C  C   F     +++H+          F C  C     RK+++
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 115 KDHERT-HTGEKPY 127
             H R  H+   P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 77.6 bits (192), Expect = 7e-19
 Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 21/93 (22%)

Query: 85  NLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE--KPYQCEFCGAQFRFKGSS 142
           +       H+G +P+ C +C   F +   +K H      E    + C  C          
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI------ 55

Query: 143 GTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
                        +++S+L  H R  H      
Sbjct: 56  -------------ARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT-DRKRPFSCEKCDKSFYTQQNLVQHE 62
             +H+G +PYEC  C   F    T K H++    +    F C  CD     + +L  H 
Sbjct: 6  SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

Query: 63 KT-HSGSK 69
          +  HS S 
Sbjct: 66 RKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE--KPYVCE 235
           H+GE+PY+C IC+A F      K H      E    + C 
Sbjct: 10  HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP 49

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 218 HFKKHRRIHTGEKPYVCEV 236
                 R H+GEKPY C +
Sbjct: 2   SSGSSGRTHSGEKPYECYI 20

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 85.0 bits (211), Expect = 2e-21
 Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 26/123 (21%)

Query: 51  SFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSF 108
           S  +    ++  + H          C K +    +L+ HL  HTG +P+ C    C   F
Sbjct: 2   SSGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 109 VRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRAT 168
            R  E+  H R HTG KP+QC  C   F                   S+  +L  H +  
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSF-------------------SRSDHLALHMK-R 97

Query: 169 HFN 171
           H N
Sbjct: 98  HQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 81.5 bits (202), Expect = 5e-20
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 37  TDRKRPFSCEK--CDKSFYTQQNLVQHEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAV 92
            +++R   C+   C K +    +L  H +TH+G K + CT   C   F     L  H   
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHT 122
           HTG +PF C VC +SF R   +  H + H 
Sbjct: 70  HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 78.1 bits (193), Expect = 1e-18
 Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 55/151 (36%)

Query: 79  AFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC--EFCGAQF 136
           + G+         +H  + P     C K + + + +K H RTHTGEKPY+C  E C  +F
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 137 RFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKA 196
                              ++   L  H R                              
Sbjct: 58  -------------------ARSDELTRHYRK----------------------------- 69

Query: 197 AHTGERPYQCDICNATFIYPEHFKKHRRIHT 227
            HTG +P+QC +CN +F   +H   H + H 
Sbjct: 70  -HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC--EKCDKSFYTQQNLVQH 61
              H    P     C K +      KAHL THT  K P+ C  E CD  F     L +H
Sbjct: 12 KRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEK-PYKCTWEGCDWRFARSDELTRH 66

Query: 62 EKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHT 94
           + H+G+K F C  C ++F    +L +H+  H 
Sbjct: 67 YRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 61.5 bits (150), Expect = 2e-12
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 12/85 (14%)

Query: 156 SQRSNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNA 211
                    +R        + C    C K + +   L  H++  HTGE+PY+C    C+ 
Sbjct: 4   GSSGPDLEKRR-------IHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDW 55

Query: 212 TFIYPEHFKKHRRIHTGEKPYVCEV 236
            F   +   +H R HTG KP+ C V
Sbjct: 56  RFARSDELTRHYRKHTGAKPFQCGV 80

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 78.3 bits (194), Expect = 4e-19
 Identities = 14/66 (21%), Positives = 26/66 (39%)

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
           + S      C+EC  +  +   L +H  +H  +RPF C  C     + + +  H +   G
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 124 EKPYQC 129
           +     
Sbjct: 63  DMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 75.2 bits (186), Expect = 5e-18
 Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 91  AVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKL 150
           +  +   P  C  C  S   KA ++ HER H  ++P++C +C                  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDT-------------- 47

Query: 151 LLCFLSQRSNLQSHKRATHFNDKRYPCT 178
                 Q SNL  H +     D   P +
Sbjct: 48  -----KQPSNLSKHMK-KFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 49/114 (42%)

Query: 119 RTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCT 178
            + +   P +C  C                       S ++ L+ H+R            
Sbjct: 2   SSGSSGHPEKCSECSYSC-------------------SSKAALRIHERI----------- 31

Query: 179 SCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
                              H  +RP++C+ C+     P +  KH +   G+   
Sbjct: 32  -------------------HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 64.8 bits (159), Expect = 4e-14
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHT 94
          + +    P  C +C  S  ++  L  HE+ H   + F C  C        NL  H+    
Sbjct: 3  SGSSGH-PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 95 G 95
          G
Sbjct: 62 G 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 64.1 bits (157), Expect = 8e-14
 Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 7  SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHS 66
          S +   P +C  C  +  SK   + H   H   + PF C  C        NL +H K   
Sbjct: 3  SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDR-PFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 67 GSK 69
          G  
Sbjct: 62 GDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +   P +C  C+ +       + H RIH  ++P+ C 
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCN 41

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 8/42 (19%), Positives = 11/42 (26%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
          H   H   RP++C  C            H+          S 
Sbjct: 28 HERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 77.2 bits (191), Expect = 2e-18
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 39  RKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTGN 96
                    C K++    +L  H +TH+G K + C    CG  F     L  H   HTG+
Sbjct: 4   ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63

Query: 97  RPFICRVCGKSFVRKAEVKDHERTH 121
           RPF C+ C ++F R   +  H + H
Sbjct: 64  RPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 76.0 bits (188), Expect = 5e-18
 Identities = 34/136 (25%), Positives = 47/136 (34%), Gaps = 51/136 (37%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC--EFCGAQFRFKGSSGTESIDKL 150
            T         CGK++ + + +K H RTHTGEKPY C  + CG +F              
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKF-------------- 47

Query: 151 LLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICN 210
                ++   L  H R                               HTG RP+QC  C+
Sbjct: 48  -----ARSDELTRHYR------------------------------KHTGHRPFQCQKCD 72

Query: 211 ATFIYPEHFKKHRRIH 226
             F   +H   H + H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIH 226
                      C K + +   L  H++  HTGE+PY CD   C   F   +   +H R H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 227 TGEKPYVCEV 236
           TG +P+ C+ 
Sbjct: 61  TGHRPFQCQK 70

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 4  HLVSHTGARPYECK--TCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQH 61
          HL +HTG +PY C    C   F        H   HT  + PF C+KCD++F    +L  H
Sbjct: 26 HLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR-PFQCQKCDRAFSRSDHLALH 84

Query: 62 EKTH 65
           K H
Sbjct: 85 MKRH 88

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 73.6 bits (181), Expect = 3e-17
 Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 22/95 (23%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHT---GEKPYQCEFCGAQFRFKGSSGTESIDK 149
            +G+    C +CG +  +KA +  H+R H        + CEFCG +F             
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFE------------ 49

Query: 150 LLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAF 184
                  +  ++ +H+  +H      P  S   + 
Sbjct: 50  -------KPDSVAAHRSKSHPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.9 bits (174), Expect = 3e-16
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 3/77 (3%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRK--RPFSCEKCDKSFYTQQNLVQHEKTH 65
           +G+   +C+ C  T   K +   H   H +      F CE C K F    ++  H    
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 66 SGSKDFVCTE-CGKAFG 81
            +      E  G + G
Sbjct: 62 HPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 69.4 bits (170), Expect = 1e-15
 Identities = 17/69 (24%), Positives = 20/69 (28%), Gaps = 3/69 (4%)

Query: 65  HSGSKDFVCTECGKAFGTLRNLEVHLAVHT---GNRPFICRVCGKSFVRKAEVKDHERTH 121
            SGS    C  CG       +L  H   H        F C  CGK F +   V  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 122 TGEKPYQCE 130
                   +
Sbjct: 62  HPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 63.2 bits (154), Expect = 2e-13
 Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 23/96 (23%)

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH---FNDKRYPC 177
            +G    QCE CG   R                   Q+++L  H+R  H       R+PC
Sbjct: 2   SSGSSGLQCEICGFTCR-------------------QKASLNWHQR-KHAETVAALRFPC 41

Query: 178 TSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF 213
             C K F++   +  H   +H        +    + 
Sbjct: 42  EFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 62.0 bits (151), Expect = 5e-13
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 41  RPFSCEKCDKSFYTQQNLVQHEKTHS---GSKDFVCTECGKAFGTLRNLEVHLAV-HTGN 96
               CE C  +   + +L  H++ H+    +  F C  CGK F    ++  H +  H   
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 97  RPFICRVCGKSF 108
                   G S 
Sbjct: 66  LLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHT---GEKPYVCEV 236
            +G    QC+IC  T         H+R H        + CE 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF 43

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.1 bits (170), Expect = 9e-16
 Identities = 17/111 (15%), Positives = 26/111 (23%), Gaps = 47/111 (42%)

Query: 118 ERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPC 177
           E T  GE  Y+C+ C   +                   +  SN   H   +H        
Sbjct: 2   EFTKEGEHTYRCKVCSRVY-------------------THISNFCRHYVTSH-------- 34

Query: 178 TSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTG 228
                                   + Y C  C   F   ++   H +I   
Sbjct: 35  --------------------KRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 62  EKTHSGSKDFVCTECGKAFGTLRNLEVHL--AVHTGNRPFICRVCGKSFVRKAEVKDHER 119
           E T  G   + C  C + +  + N   H   +     + + C  C K F RK  +  H +
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 120 THTG 123
               
Sbjct: 62  IIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVT--HTDRKRPFSCEKCDKSFYTQQNLVQHEKTH 65
            G   Y CK C + +     +  H VT    + K  + C  C K F  + N+  H K  
Sbjct: 5  KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVK-VYPCPFCFKEFTRKDNMTAHVKII 63

Query: 66 SG 67
            
Sbjct: 64 HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRI--HTGEKPYVCEV 236
             GE  Y+C +C+  + +  +F +H         K Y C  
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF 45

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.5 bits (166), Expect = 4e-15
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 19/73 (26%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLS 156
           R F+C VC ++F R+  +K H R+HT EKPY C  C   F                   +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAF-------------------T 41

Query: 157 QRSNLQSHKRATH 169
           +R  L  H +  H
Sbjct: 42  RRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 69  KDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHE-RTHTGEK 125
           + FVC  C +AF    +L+ H   HT  +P+ C +C ++F R+  +  H  + H+G  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLA-VHTGN 96
          R F CE C ++F  Q++L +H ++H+  K + C  C +AF     L  H   +H+GN
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKH-RRIHTGEK 230
           + + C  C +AF R+  L  H ++ HT E+PY C +CN  F   +   +H ++IH+G  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
           R + C++C   F   EH K+H R HT EKPY C +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL 35

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHE-KTHSG 67
          R + C+ C + F  +   K H  +HT+ K P+ C  C+++F  +  L++H  K HSG
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK-PYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDR 39
          H  SHT  +PY C  C + F    T +  L+ H  +
Sbjct: 21 HYRSHTNEKPYPCGLCNRAF----TRRDLLIRHAQK 52

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 64.7 bits (157), Expect = 5e-14
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 57  NLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKD 116
           +  + +K H G +   C++CG  F       +  +  +  +  +C  C K   ++A +  
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNK 57

Query: 117 HERTHTGEKPY 127
            E   +G+K  
Sbjct: 58  DEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 53.1 bits (127), Expect = 8e-10
 Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 9/74 (12%)

Query: 159 SNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEH 218
            +    ++  H  D+   C+ C   F RR        +  +  +   C+ C         
Sbjct: 4   GSSGKRQK-IHLGDRSQKCSKCGIIFIRR--------STLSRRKTPMCEKCRKDSCQEAA 54

Query: 219 FKKHRRIHTGEKPY 232
             K     +G+K  
Sbjct: 55  LNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.5 bits (115), Expect = 4e-08
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEK 63
              H G R  +C  C   F+ + T          R++   CEKC K    +  L + E 
Sbjct: 9  RQKIHLGDRSQKCSKCGIIFIRRSTLS--------RRKTPMCEKCRKDSCQEAALNKDEG 60

Query: 64 THSGSKDF 71
            SG K  
Sbjct: 61 NESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 28/95 (29%)

Query: 110 RKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
                   ++ H G++  +C  CG  F                    +RS L        
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIF-------------------IRRSTLSRR----- 37

Query: 170 FNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPY 204
              K   C  C K   +   L+   +   +G++  
Sbjct: 38  ---KTPMCEKCRKDSCQEAALNKD-EGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.7 bits (100), Expect = 5e-06
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 81  GTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQF 136
           G+  +      +H G+R   C  CG  F+R++       T +  K   CE C    
Sbjct: 1   GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRS-------TLSRRKTPMCEKCRKDS 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 63.8 bits (156), Expect = 7e-14
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHE-RTHTGEKPYQCEFCGAQF 136
             +  +  +P+IC+ CGK F R   +  H  + HT E+P++C+   +  
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 194 IKAAHTGERPYQCDICNATFIYPEHFKKH-RRIHTGEKPYVCEV 236
             ++ +  +PY C  C   F  P+H   H +++HT E+P+ C+V
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 46

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 58.4 bits (142), Expect = 7e-12
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHL-AVHTGNRPFICRVCGKSF 108
              + S  K ++C  CGK F    +L  H+  VHT  RP  C+V     
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 167 ATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF 213
           ++    K Y C SC K F R   L+ HIK  HT ERP++C +  +  
Sbjct: 5   SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 19/68 (27%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +  KPY C+ CG  F                   S+  +L  H +  H +++ + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGF-------------------SRPDHLNGHIKQVHTSERPHK 43

Query: 177 CTSCPKAF 184
           C       
Sbjct: 44  CQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEK-THSGSKDFVCTECGKAFGT 82
          + +  K P+ C+ C K F    +L  H K  H+  +   C        +
Sbjct: 6  SGSVGK-PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 8/50 (16%)

Query: 7  SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDR----KRPFSCEKCDKSF 52
          S +  +PY C++C K F    +   HL  H  +    +RP  C+      
Sbjct: 6  SGSVGKPYICQSCGKGF----SRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 3/81 (3%)

Query: 44  SCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE--CGKAFGTLRNLEVHLAVHTGNRPFIC 101
             E C K+F     L  H+ +H+    + C    C K F     L+ H  VH G      
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 102 RVCGKSFVRKAE-VKDHERTH 121
             C          +K     H
Sbjct: 65  DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 22/97 (22%)

Query: 104 CGKSFVRKAEVKDHERTHTGEKPYQC--EFCGAQFRFKGSSGTESIDKLLLCFLSQRSNL 161
           CGK+F +  ++K H+ +HT + PY+C  E C  +F                   S  S L
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF-------------------SLPSRL 49

Query: 162 QSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAH 198
           + H++  H         SC    K   L   H+   H
Sbjct: 50  KRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.9 bits (138), Expect = 4e-11
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPYV 233
              +C KAFK+   L  H  + HT + PY+C    C+  F  P   K+H ++H G     
Sbjct: 5   HFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63

Query: 234 CEV 236
            + 
Sbjct: 64  DDS 66

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 15 ECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFV 72
            + C K F      K H  +HT +  P+ C  E CDK F     L +HEK H+G     
Sbjct: 5  HFENCGKAFKKHNQLKVHQFSHTQQL-PYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63

Query: 73 CTECGKAFGTLRNLEVH 89
             C     T      H
Sbjct: 64 DDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 4/65 (6%)

Query: 4  HLVSHTGARPYECK--TCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQH 61
          H  SHT   PYEC    C K F      K H   H         + C     T    ++H
Sbjct: 22 HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA-GYPCKKDDSCSFVGKTWTLYLKH 80

Query: 62 -EKTH 65
            + H
Sbjct: 81 VAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 2/34 (5%)

Query: 204 YQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCE 235
           Y C    C   F      K H+  HT + PY C 
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 35

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 64.8 bits (157), Expect = 1e-13
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 4   HLVSHTGARPYECKTCKKTFVSKYTYKAHL-VTHTDRKRPFSCEKC---DKSFYTQQNLV 59
           +    TGA  + CK C   + +      H+  T   R      +       S   +++L+
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLA 91
           + E      K   C  CG +F +L++L VH+ 
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 60.5 bits (146), Expect = 6e-12
 Identities = 18/111 (16%), Positives = 31/111 (27%), Gaps = 8/111 (7%)

Query: 25  SKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQH-----EKTHSGSKDFVCTECGKA 79
           S  + K +    T     F C+ C  ++ T   L  H            +         +
Sbjct: 3   SGSSGKLYGSIFTG-ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 80  FGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDH--ERTHTGEKPYQ 128
               R+L          +   C  CG SF    ++  H  +  H  +    
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 59.8 bits (144), Expect = 9e-12
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 20/124 (16%)

Query: 85  NLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDH--ERTHTGEKPYQCEFCGAQFRFKGSS 142
           + +++ ++ TG   F C+ C  ++    E+  H  E  H  +  ++ +    +   K   
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK--- 62

Query: 143 GTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYH-IKAAHTGE 201
                         ++ +L   +       K   C  C  +F+  + L  H IK  H  +
Sbjct: 63  -------------PRKRSLLEMEG-KEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108

Query: 202 RPYQ 205
               
Sbjct: 109 VSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 18/125 (14%), Positives = 34/125 (27%), Gaps = 26/125 (20%)

Query: 114 VKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRAT----H 169
            K +    TG   ++C+ C A +                        L  H   T     
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYD-------------------TLVELTVHMNETGHYRD 47

Query: 170 FNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKH--RRIHT 227
            N +         +  R+R L    +     ++  +C  C  +F   +    H  +  H 
Sbjct: 48  DNHETDNNNPKRWSKPRKRSLLEM-EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY 106

Query: 228 GEKPY 232
            +   
Sbjct: 107 QKVSG 111

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G RP+ C  CGK+F R + + +H + H  EK    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GERPY C+ C   F    H  +H + H  EK    
Sbjct: 7   GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GE+PY C  CG  F                    + S+L  H +  HF +K   
Sbjct: 3   SGSSGSGERPYGCNECGKNF-------------------GRHSHLIEHLK-RHFREKSSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  + P+ C +C K+F    +L++H K H   K    +
Sbjct: 3  SGSSGSGER-PYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   ++ Y C  C K F R   L  H+K  H  E+    
Sbjct: 2   SSGS-SGSGERPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 62.1 bits (152), Expect = 2e-13
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
             GE+PY C+IC   F + +  K H RIHTG  P 
Sbjct: 6   SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 59.0 bits (144), Expect = 3e-12
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPY 127
                 G +P+ C +CG  F     +K H R HTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPF 99
             +  G K + C  CG  F  L+ L+ HL +HTG+ P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 18/88 (20%), Positives = 21/88 (23%), Gaps = 49/88 (55%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  GEKPY CE CG +F                        L+SH R          
Sbjct: 2   SSGSSGGEKPYPCEICGTRF-------------------RHLQTLKSHLR---------- 32

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPY 204
                                HTG  P 
Sbjct: 33  --------------------IHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
              +    K P+ CE C   F   Q L  H + H+GS 
Sbjct: 1  GSSGSSGGEK-PYPCEICGTRFRHLQTLKSHLRIHTGSG 38

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.9 bits (97), Expect = 9e-06
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFS 44
             S  G +PY C+ C   F    T K+HL  HT    P S
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG-PSS 41

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 3e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
              +  TG +PF C +CGKSF  ++ +  H   HT EKP    
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 8e-13
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+P++CDIC  +F       +H  +HT EKP    
Sbjct: 7   GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 17/91 (18%), Positives = 22/91 (24%), Gaps = 49/91 (53%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP++C+ CG  F                     RS L  H            
Sbjct: 3   SGSSGTGEKPFKCDICGKSF-------------------CGRSRLNRHSM---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCD 207
                                HT E+P    
Sbjct: 34  --------------------VHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K PF C+ C KSF  +  L +H   H+  K    +
Sbjct: 2  SSGSSGTGEK-PFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +P++C  C K+F  +     H + HT  K P    
Sbjct: 3  SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK-PSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G RPF C  CGK F R++ +  H R H+ EK    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 195 KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            ++ +GERP++C+ C   F    H   H R+H+ EK    
Sbjct: 4   GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GE+P++C  CG  F                    +RS+L  H R  H  +K   
Sbjct: 3   SGSSGSGERPFKCNECGKGF-------------------GRRSHLAGHLR-LHSREKSSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  + PF C +C K F  + +L  H + HS  K    +
Sbjct: 3  SGSSGSGER-PFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S +G RP++C  C K F  +     HL  H+  K     
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK-SSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.4 bits (150), Expect = 4e-13
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCG 133
             +  +G +PF C  CGK F   ++   H+R+H+GEKP      G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +GE+P++C+ C   F        H+R H+GEKP    
Sbjct: 7   GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEKP++CE CG  F                      S   SH+R +H  +K   
Sbjct: 3   SGSSGSGEKPFKCEECGKGF-------------------YTNSQCYSHQR-SHSGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECG 77
          +   + +  K PF CE+C K FYT      H+++HSG K       G
Sbjct: 2  SSGSSGSGEK-PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S +G +P++C+ C K F +     +H  +H+  K P    
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK-PSGPS 44

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.0 bits (149), Expect = 5e-13
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
             GE+PY+C+ C A F+   H + H  IHTG  P 
Sbjct: 6   SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 57.9 bits (141), Expect = 8e-12
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPY 127
                 G +P+ C  CG  FV+ A ++ H   HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 18/88 (20%), Positives = 25/88 (28%), Gaps = 49/88 (55%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  GEKPY+CE CGA+F                    Q ++L++H            
Sbjct: 2   SSGSSGGEKPYKCETCGARF-------------------VQVAHLRAHVL---------- 32

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPY 204
                                HTG  P 
Sbjct: 33  --------------------IHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPF 99
             +  G K + C  CG  F  + +L  H+ +HTG+ P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
             S  G +PY+C+TC   FV     +AH++ HT
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
             +    K P+ CE C   F    +L  H   H+GS 
Sbjct: 2  SSGSSGGEK-PYKCETCGARFVQVAHLRAHVLIHTGSG 38

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 7e-13
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
              +  TG  P+ C  CGK+F RK ++  H+RTH GEKP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE PY+C  C   F        H+R H GEKP   
Sbjct: 7   GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGE PY+C  CG  F                   S++  L SH+R TH  +K   
Sbjct: 3   SGSSGTGENPYECHECGKAF-------------------SRKYQLISHQR-THAGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG  PYEC  C K F  KY   +H  TH   K P   
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK-PSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T    P+ C +C K+F  +  L+ H++TH+G K    +
Sbjct: 3  SGSSGTGEN-PYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 7e-13
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG  PFIC  CGK F  K  +  H++ HTGE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE P+ C  C   F +  +   H++IHTGE+P   
Sbjct: 7   GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
              + +G   F+C+ECGK F    NL +H  +HTG RP   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGE P+ C  CG  F                   + ++NL  H++          
Sbjct: 3   SGSSGTGENPFICSECGKVF-------------------THKTNLIIHQK---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGERP   
Sbjct: 34  --------------------IHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T    PF C +C K F  + NL+ H+K H+G +    +
Sbjct: 2  SSGSSGTGEN-PFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG  P+ C  C K F  K     H   HT  + P   
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER-PSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 7e-13
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
              +  +G +P+ C  CGK+F +K+ +  H+RTHTGEKP    
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +GE+PY C+ C  TF        H+R HTGEKP    
Sbjct: 7   GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 20/62 (32%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEKPY C  CG  F                   SQ+S L +H+R TH  +K   
Sbjct: 3   SGSSGSGEKPYGCNECGKTF-------------------SQKSILSAHQR-THTGEKPSG 42

Query: 177 CT 178
            +
Sbjct: 43  PS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
          +   + +  K P+ C +C K+F  +  L  H++TH+G K    + 
Sbjct: 2  SSGSSGSGEK-PYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S +G +PY C  C KTF  K    AH  THT  K P    
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK-PSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 9e-13
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C  CGK+F RK+ +  H+++HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C  C   F        H++ HTGE+    
Sbjct: 7   GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   +++S L  H++ +H  ++   
Sbjct: 3   SGSSGTGEKPYKCSDCGKAF-------------------TRKSGLHIHQQ-SHTGERHSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C+ C KAF R+  L  H + +HTGER    
Sbjct: 2   SSGS-SGTGEKPYKCSDCGKAFTRKSGLHIH-QQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C  C K+F  +  L  H+++H+G +    +
Sbjct: 3  SGSSGTGEK-PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PY+C  C K F  K     H  +HT  +     
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER-HSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 9e-13
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+IC  CGKSF++K+ +  H R HTGEKP    
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 2e-12
 Identities = 20/38 (52%), Positives = 24/38 (63%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY C+ C  +FI   H  +HRRIHTGEKP    
Sbjct: 7   GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY C  CG  F                    Q+S+L  H+R  H  +K   
Sbjct: 3   SGSSGTGEKPYICNECGKSF-------------------IQKSHLNRHRR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
          +   + T  K P+ C +C KSF  + +L +H + H+G K    + 
Sbjct: 2  SSGSSGTGEK-PYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG R + C  CGK+F RK+ +  H+R HTGEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGER Y+C  C   F        H+RIHTGEKP   
Sbjct: 7   GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGE+ Y+C  CG  F                   +++S L  H+R  H  +K   
Sbjct: 3   SGSSGTGERHYECSECGKAF-------------------ARKSTLIMHQR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG R YEC  C K F  K T   H   HT  K P   
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK-PSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   ++ Y C+ C KAF R+  L  H +  HTGE+P   
Sbjct: 2   SSGS-SGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  +  + C +C K+F  +  L+ H++ H+G K    +
Sbjct: 3  SGSSGTGER-HYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 91  AVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
           +  +G +PF C  C K+F  K+ +  H++TH  EKP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 58.3 bits (142), Expect = 5e-12
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 195 KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +  +GE+P+ C  C   F    +   H++ H  EKP   
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
            +  K PF C  C+K+F ++  L+ H++TH+  K    +
Sbjct: 4  GSSGEK-PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 20/62 (32%)

Query: 118 ERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPC 177
               +GEKP+ C  C   F                   S +S L  H++ TH  +K    
Sbjct: 2   SSGSSGEKPFGCSCCEKAF-------------------SSKSYLLVHQQ-THAEEKPSGP 41

Query: 178 TS 179
           +S
Sbjct: 42  SS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 7  SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
            +G +P+ C  C+K F SK     H  TH + K P   
Sbjct: 4  GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEK-PSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 167 ATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           +    +K + C+ C KAF  +  L  H +  H  E+P   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVH-QQTHAEEKPSGP 41

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
              +   G + + C VCGK F + + ++ H+R HTGEKP   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             GE+ Y+CD+C   F    H + H+R+HTGEKP   
Sbjct: 7   GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 8e-09
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  GEK Y+C+ CG +F                   SQ S+LQ+H+R  H  +K   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEF-------------------SQSSHLQTHQR-VHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             +    K  + C+ C K F    +L  H++ H+G K    +
Sbjct: 3  SGSSGMGEK-CYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S  G + Y+C  C K F      + H   HT  K P   
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK-PSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C VCGK+FV  A +  H R HT E      
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY C++C   F+   H  +H R+HT E      
Sbjct: 7   GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 16/91 (17%), Positives = 19/91 (20%), Gaps = 49/91 (53%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY C  CG  F                      ++L  H R          
Sbjct: 3   SGSSGTGEKPYSCNVCGKAF-------------------VLSAHLNQHLR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQCD 207
                                HT E      
Sbjct: 34  --------------------VHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+SC  C K+F    +L QH + H+       +
Sbjct: 3  SGSSGTGEK-PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY C  C K FV       HL  HT         
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET-LSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG RP+IC VCGK+F  ++ +  H++ HTGEKP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGERPY C +C   F    +  KH++IHTGEKP   
Sbjct: 7   GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 19/90 (21%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGE+PY C  CG  F                   + RSNL  H++          
Sbjct: 3   SGSSGTGERPYICTVCGKAF-------------------TDRSNLIKHQK---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T  + P+ C  C K+F  + NL++H+K H+G K    
Sbjct: 2  SSGSSGTGER-PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG RPY C  C K F  +     H   HT  K P     
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK-PSGPSS 45

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +   G +P+ C  CGKSF     +  H  THT EKP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             GE+PYQC  C  +F       +H   HT EKP   
Sbjct: 7   GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 5e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
               +  G K + C+ECGK+F     L  H   HT  +P   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 17/63 (26%), Positives = 20/63 (31%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  GEKPYQC  CG  F                   S    L  H   TH  +K   
Sbjct: 3   SGSSGEGEKPYQCSECGKSF-------------------SGSYRLTQHWI-THTREKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C+ C K+F     L  H    HT E+P   
Sbjct: 2   SSGS-SGEGEKPYQCSECGKSFSGSYRLTQH-WITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S  G +PY+C  C K+F   Y    H +THT  K P   
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK-PSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   +    K P+ C +C KSF     L QH  TH+  K    +
Sbjct: 2  SSGSSGEGEK-PYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +  +P+ C  CGK + R+  +  H+R H GEK    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-11
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            + E+PY+C+ C   +    +   H+R+H GEK    
Sbjct: 7   GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
               + S  K + C +CGK +    NL++H  VH G +    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + + EKPY+CE CG  +                   ++R NL  H+R  H  +K   
Sbjct: 3   SGSSGSVEKPYKCEDCGKGY-------------------NRRLNLDMHQR-VHMGEKTSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C  C K + RR  LD H +  H GE+    
Sbjct: 2   SSGS-SGSVEKPYKCEDCGKGYNRRLNLDMH-QRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + +  K P+ CE C K +  + NL  H++ H G K    +
Sbjct: 2  SSGSSGSVEK-PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S +  +PY+C+ C K +  +     H   H   K       
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK-TSGPSS 45

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG + + C+ CGKSF R   +  HER H+GEKP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+ Y C  C  +F       KH R+H+GEKP   
Sbjct: 7   GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEK Y C+ CG  F                   S+   L  H+R  H  +K   
Sbjct: 3   SGSSGTGEKLYNCKECGKSF-------------------SRAPCLLKHER-LHSGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K  ++C++C KSF     L++HE+ HSG K    +
Sbjct: 2  SSGSSGTGEK-LYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C  C K+F R   L  H +  H+GE+P   
Sbjct: 2   SSGS-SGTGEKLYNCKECGKSFSRAPCLLKH-ERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG + Y CK C K+F        H   H+  K P   
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK-PSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +PF C  C K+F  K+ +  H+RTHTGEKP    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.3 bits (137), Expect = 3e-11
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+P++C  C   F    +   H+R HTGEKP    
Sbjct: 7   GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP++C  C   F                   + +SNL  H+R TH  +K   
Sbjct: 3   SGSSGTGEKPFECSECQKAF-------------------NTKSNLIVHQR-THTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K PF C +C K+F T+ NL+ H++TH+G K    +
Sbjct: 2  SSGSSGTGEK-PFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K + C+ C KAF  +  L  H +  HTGE+P   
Sbjct: 2   SSGS-SGTGEKPFECSECQKAFNTKSNLIVH-QRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +P+EC  C+K F +K     H  THT  K P    
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK-PSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C  C K+F  K+++  H+R+HTG KP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TG +PY C  C  TF        H+R HTG KP   
Sbjct: 7   GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 16/63 (25%), Positives = 21/63 (33%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG KPY C  C   F                   S +S L  H+R +H   K   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTF-------------------SLKSQLIVHQR-SHTGVKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K+F  +  L+ H+++H+G K    +
Sbjct: 2  SSGSSGTGVK-PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +    K Y C+ C K F  +  L  H + +HTG +P   
Sbjct: 2   SSGS-SGTGVKPYGCSQCAKTFSLKSQLIVH-QRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PY C  C KTF  K     H  +HT  K P   
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK-PSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
              +  TG +P+ C  C K+F  K+ +  H+RTHTGE     
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.3 bits (137), Expect = 3e-11
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C+ C   F    +   H+R HTGE     
Sbjct: 7   GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 18/90 (20%), Positives = 23/90 (25%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  C   F                   + +SNL  H+R          
Sbjct: 3   SGSSGTGEKPYECNECQKAF-------------------NTKSNLMVHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE     
Sbjct: 34  --------------------THTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PYEC  C+K F +K     H  THT      S 
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES-GPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T  K P+ C +C K+F T+ NL+ H++TH+G      
Sbjct: 2  SSGSSGTGEK-PYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +PF C  CGKSF  K  +  H+R HTGEK    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TG++P++C  C  +F    +   H+RIHTGEK    
Sbjct: 7   GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 20/62 (32%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG+KP++C  CG  F                     + NL +H+R  H  +K  P
Sbjct: 3   SGSSGTGQKPFECTHCGKSF-------------------RAKGNLVTHQR-IHTGEKSGP 42

Query: 177 CT 178
            +
Sbjct: 43  SS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T +K PF C  C KSF  + NLV H++ H+G K    +
Sbjct: 2  SSGSSGTGQK-PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +P+EC  C K+F +K     H   HT  K     
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK-SGPS 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
              +  TG +P+ C  CGKSF++K+++  H+R HTGE P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C  C  +FI       H+RIHTGE P   
Sbjct: 7   GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 8e-08
 Identities = 19/90 (21%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                    ++S L  H+R          
Sbjct: 3   SGSSGTGEKPYECSDCGKSF-------------------IKKSQLHVHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE P   
Sbjct: 34  --------------------IHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PYEC  C K+F+ K     H   HT    P   
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN-PSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T  K P+ C  C KSF  +  L  H++ H+G      
Sbjct: 2  SSGSSGTGEK-PYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C +C   F    H  +H  +H+GE+P   
Sbjct: 7   GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C+VCGK+F   + +  H   H+GE+P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 19/90 (21%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C+ CG  FR                     S+L  H            
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFR-------------------VSSHLVQHHS---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                H+GERP   
Sbjct: 34  --------------------VHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C+ C K+F    +LVQH   HSG +    +
Sbjct: 3  SGSSGTGEK-PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTH 36
             S TG +PY+C+ C K F       +HLV H
Sbjct: 3  SGSSGTGEKPYKCQVCGKAF----RVSSHLVQH 31

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +G++PY+C  C  TFI   H  +H+R+HTGE+     
Sbjct: 7   GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  +G +P+ C+ C K+F++   +  H+R HTGE+     
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +G+KPY+C+ C   F                    Q  +L  HKR  H  ++   
Sbjct: 3   SGSSGSGKKPYECKECRKTF-------------------IQIGHLNQHKR-VHTGERSSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S +G +PYECK C+KTF+       H   HT  +       
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER-SSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +PF C  CGKSF   +++  H+R HTGEKP    
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+P++C  C  +F        H+RIHTGEKP    
Sbjct: 7   GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP++C  CG  F                   S  S L +H+R  H  +K   
Sbjct: 3   SGSSGTGEKPFECAECGKSF-------------------SISSQLATHQR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +P+EC  C K+F        H   HT  K P    
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK-PSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K PF C +C KSF     L  H++ H+G K    +
Sbjct: 3  SGSSGTGEK-PFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG RP+ C  CGK+F  K+ +  H R+HTGEKP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TG+RPY+C  C   F        HRR HTGEKP   
Sbjct: 7   GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG++PY+C  CG  F                     +S+L  H+R          
Sbjct: 3   SGSSGTGQRPYECIECGKAF-------------------KTKSSLICHRR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                               +HTGE+P   
Sbjct: 34  --------------------SHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
             + T ++ P+ C +C K+F T+ +L+ H ++H+G K    + 
Sbjct: 3  SGSSGTGQR-PYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG RPYEC  C K F +K +   H  +HT  K P   
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK-PSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+IC  CGK+F  ++ +  H++ HT +KP    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY C  C   F    +  KH++IHT +KP    
Sbjct: 7   GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY C  CG  F                   + RSNL  H++  H   K   
Sbjct: 3   SGSSGTGEKPYICAECGKAF-------------------TIRSNLIKHQK-IHTKQKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K+F  + NL++H+K H+  K    +
Sbjct: 2  SSGSSGTGEK-PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY C  C K F  +     H   HT +K P    
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK-PSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +   G +P+ C  CGK+F  K+ +  H RTH+GEKP    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
             GE+PY C  C   F    +   H R H+GEKP    
Sbjct: 7   GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 18/63 (28%), Positives = 22/63 (34%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  GEKPY C  CG  F                   S +S L  H R TH  +K   
Sbjct: 3   SGSSGAGEKPYGCSECGKAF-------------------SSKSYLIIHMR-THSGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   +    K P+ C +C K+F ++  L+ H +THSG K    +
Sbjct: 2  SSGSSGAGEK-PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C+ C KAF  +  L  H++  H+GE+P   
Sbjct: 2   SSGS-SGAGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S  G +PY C  C K F SK     H+ TH+  K P    
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK-PSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P  C  CGK+F  K+++  H+RTH  +K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+P +C  C   F +      H+R H  +K    
Sbjct: 7   GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 7e-08
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP +C  CG  F                     +S L  H+R TH +DK   
Sbjct: 3   SGSSGTGEKPCKCTECGKAF-------------------CWKSQLIMHQR-THVDDKHSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P  C +C K+F  +  L+ H++TH   K    +
Sbjct: 2  SSGSSGTGEK-PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K   CT C KAF  +  L  H +  H  ++    
Sbjct: 2   SSGS-SGTGEKPCKCTECGKAFCWKSQLIMH-QRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +P +C  C K F  K     H  TH D K     
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK-HSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F    H  +HRR+HTG KP    
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK F + + +  H R HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 19/90 (21%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   +Q S+L  H+R          
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------TQNSHLARHRR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTG +P   
Sbjct: 34  --------------------VHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K F    +L +H + H+G K    +
Sbjct: 2  SSGSSGTGEK-PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY+C  C K F        H   HT  K P    
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK-PSGPS 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.4 bits (145), Expect = 2e-12
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG  P+ C  CGK F RK ++  H++TH+G+     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.4 bits (132), Expect = 1e-10
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE PY+C  C   F   +    H++ H+G+     
Sbjct: 7   GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/90 (16%), Positives = 23/90 (25%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGE PY+C  CG  F                   S++  L SH++          
Sbjct: 3   SGSSGTGENPYECCECGKVF-------------------SRKDQLVSHQK---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                H+G+     
Sbjct: 34  --------------------THSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG  PYEC  C K F  K    +H  TH+ +    S 
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS-GPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.2 bits (90), Expect = 8e-05
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T    P+ C +C K F  +  LV H+KTHSG      
Sbjct: 2  SSGSSGTGEN-PYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG + F C  CGK+F RK+ +  H++ HTGEKP    
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TG + ++C  C   F        H++IHTGEKP    
Sbjct: 7   GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 15/90 (16%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG K ++C  CG  F                   +++S L  H++          
Sbjct: 3   SGSSGTGGKHFECTECGKAF-------------------TRKSTLSMHQK---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG + +EC  C K F  K T   H   HT  K P     
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK-PSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K  F C +C K+F  +  L  H+K H+G K    +
Sbjct: 2  SSGSSGTGGK-HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY C  C  +F +     KH+R+H+GEKP    
Sbjct: 7   GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C+ CGKSF   + +  H+R H+GEKP    
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 18/90 (20%), Positives = 23/90 (25%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY C+ CG  F                      S L  H+R          
Sbjct: 3   SGSSGTGEKPYNCKECGKSF-------------------RWASCLLKHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                H+GE+P   
Sbjct: 34  --------------------VHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
              + +G K + C ECGK+F     L  H  VH+G +P   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
          +   + T  K P++C++C KSF     L++H++ HSG K    + 
Sbjct: 2  SSGSSGTGEK-PYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +   G + + CR C   F + + ++ H+  H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             GE+ ++C  C+  F      + H+ +H GEKP   
Sbjct: 7   GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 5e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
              +  G K + C EC   F    +L +H  VH G +P   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 15/90 (16%), Positives = 22/90 (24%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  GEK ++C  C   F                   SQ S+L+ H+           
Sbjct: 3   SGSSGMGEKTWKCRECDMCF-------------------SQASSLRLHQN---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                H GE+P   
Sbjct: 34  --------------------VHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   +    K  + C +CD  F    +L  H+  H G K    +
Sbjct: 2  SSGSSGMGEK-TWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S  G + ++C+ C   F    + + H   H   K P     
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK-PSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 2e-12
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK+F  ++ +  H++ HTGEKP    
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C  C   F    +   H++IHTGEKP    
Sbjct: 7   GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 20/64 (31%)

Query: 116 DHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
               + TGEKPY+C  CG  F                   + RSNL +H++  H  +K  
Sbjct: 2   SSGSSGTGEKPYRCAECGKAF-------------------TDRSNLFTHQK-IHTGEKPS 41

Query: 176 PCTS 179
             +S
Sbjct: 42  GPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T  K P+ C +C K+F  + NL  H+K H+G K    
Sbjct: 2  SSGSSGTGEK-PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 3  DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
              S TG +PY C  C K F  +     H   HT  K P    
Sbjct: 2  SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK-PSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 2e-12
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGERP++C+ C  +FI   H  +H+RIHTGEKP    
Sbjct: 7   GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG RP  C  CGKSF++ A +  H+R HTGEKP    
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGE+P++C  CG  F                    Q ++L  H+R          
Sbjct: 3   SGSSGTGERPHKCNECGKSF-------------------IQSAHLIQHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  + P  C +C KSF    +L+QH++ H+G K    +
Sbjct: 3  SGSSGTGER-PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 9/48 (18%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLV----THTDRKRPFSCEK 47
             S TG RP++C  C K+F       AHL+     HT  K P     
Sbjct: 3  SGSSGTGERPHKCNECGKSF----IQSAHLIQHQRIHTGEK-PSGPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G +P+ C  CGK + R+ ++  H+R HTGEK    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GE+PY+C  C   +        H+R+HTGEK    
Sbjct: 7   GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 20/64 (31%)

Query: 116 DHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
               + +GEKPY+C  CG  +                    +R +L  H+R  H  +K  
Sbjct: 2   SSGSSGSGEKPYKCVECGKGY-------------------KRRLDLDFHQR-VHTGEKLS 41

Query: 176 PCTS 179
             +S
Sbjct: 42  GPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCD 207
           S    +   +K Y C  C K +KRR  LD+H +  HTGE+     
Sbjct: 2   SSGS-SGSGEKPYKCVECGKGYKRRLDLDFH-QRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + +  K P+ C +C K +  + +L  H++ H+G K    +
Sbjct: 2  SSGSSGSGEK-PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 3  DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
              S +G +PY+C  C K +  +     H   HT  K       
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK-LSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
              +  TG +P+ C +CGKSF +K+++  H++ HTGEKP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C IC  +F        H++IHTGEKP   
Sbjct: 7   GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 18/90 (20%), Positives = 26/90 (28%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   +++S L  H++          
Sbjct: 3   SGSSGTGEKPYECSICGKSF-------------------TKKSQLHVHQQ---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PYEC  C K+F  K     H   HT  K P   
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK-PSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C  C KSF  +  L  H++ H+G K    +
Sbjct: 3  SGSSGTGEK-PYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G +PF C  CGK F + +++  H+R HTGEKP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GE+P++C+ C   F        H+R+HTGEKP   
Sbjct: 7   GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 20/91 (21%), Positives = 28/91 (30%), Gaps = 49/91 (53%)

Query: 116 DHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
               + +GEKP++CE CG +F                   +Q S L SH+R         
Sbjct: 2   SSGSSGSGEKPFKCEECGKRF-------------------TQNSQLHSHQR--------- 33

Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                 HTGE+P   
Sbjct: 34  ---------------------VHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  K PF CE+C K F     L  H++ H+G K    +
Sbjct: 3  SGSSGSGEK-PFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 3  DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
              S +G +P++C+ C K F       +H   HT  K P     
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK-PSGPSS 45

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F    H   H+RIHTG KP    
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 5e-12
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK F + + + +H+R HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   +Q S+L +H+R          
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------TQNSHLANHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTG +P   
Sbjct: 34  --------------------IHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K F    +L  H++ H+G K    +
Sbjct: 2  SSGSSGTGEK-PYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY+C  C K F        H   HT  K P    
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK-PSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TG++PY+C+ C   F    H  +HR IHTGEKP    
Sbjct: 7   GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
              +  TG +P+ C  CGK F + + +  H   HTGEKP    
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 18/90 (20%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG+KPY+C  CG  F                   +Q S+L  H+           
Sbjct: 3   SGSSGTGKKPYKCNECGKVF-------------------TQNSHLARHRG---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T +K P+ C +C K F    +L +H   H+G K    +
Sbjct: 2  SSGSSGTGKK-PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY+C  C K F        H   HT  K P    
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK-PSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+CD+C   F +     +H+R+H+GEKP    
Sbjct: 7   GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
              +  TG +P+ C VC K+F   A +  H+R H+GEKP    
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C+ C   F                   S  ++L  H+R          
Sbjct: 3   SGSSGTGEKPYECDVCRKAF-------------------SHHASLTQHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                H+GE+P   
Sbjct: 34  --------------------VHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PYEC  C+K F    +   H   H+  K P     
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK-PSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C+ C K+F    +L QH++ HSG K    +
Sbjct: 3  SGSSGTGEK-PYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C  CGK+F +KA +  H+R HTGEKP   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C  C   F    +  +H+RIHTGEKP   
Sbjct: 7   GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 20/90 (22%), Positives = 27/90 (30%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   +Q++NL  H+R          
Sbjct: 3   SGSSGTGEKPYRCGECGKAF-------------------AQKANLTQHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K+F  + NL QH++ H+G K    +
Sbjct: 2  SSGSSGTGEK-PYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PY C  C K F  K     H   HT  K P   
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK-PSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+CD+C+ +F Y      H+RIHTGEKP   
Sbjct: 7   GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C VC KSF   + +  H+R HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 18/90 (20%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C+ C   F                      S+L  H+R          
Sbjct: 3   SGSSGTGEKPYKCDVCHKSF-------------------RYGSSLTVHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
          +   + T  K P+ C+ C KSF    +L  H++ H+G K    + 
Sbjct: 2  SSGSSGTGEK-PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PY+C  C K+F    +   H   HT  K P   
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK-PSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +   G  P+ C  C KSF  K  +  H+R HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             G  PY+C  C  +F        H+R+HT EKP   
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
              + +G   + C++C K+F     L VH  +HT  +P   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 14/90 (15%), Positives = 19/90 (21%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  G  PY+C  C   F                   S +  L  H+R          
Sbjct: 3   SGSSGAGVNPYKCSQCEKSF-------------------SGKLRLLVHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HT E+P   
Sbjct: 34  --------------------MHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   +      P+ C +C+KSF  +  L+ H++ H+  K    +
Sbjct: 2  SSGSSGAGVN-PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S  G  PY+C  C+K+F  K     H   HT  K P     
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK-PSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK F+ + ++  H   HTGEKP    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   FI       H  +HTGEKP    
Sbjct: 7   GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 20/64 (31%)

Query: 116 DHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
               + TGEKPY+CE CG  F                     R +L +H    H  +K  
Sbjct: 2   SSGSSGTGEKPYKCEECGKGF-------------------ICRRDLYTHHM-VHTGEKPS 41

Query: 176 PCTS 179
             +S
Sbjct: 42  GPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C  C K F  RR L  H    HTGE+P   
Sbjct: 2   SSGS-SGTGEKPYKCEECGKGFICRRDLYTH-HMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ CE+C K F  +++L  H   H+G K    +
Sbjct: 2  SSGSSGTGEK-PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 3  DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
              S TG +PY+C+ C K F+ +     H + HT  K P    
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK-PSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +PF C  CGK F R++ +  H + HTGEKP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+P++C  C   F        H ++HTGEKP   
Sbjct: 7   GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 20/64 (31%)

Query: 116 DHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
               + TGEKP++C  CG  F                   S+RS L  H +  H  +K  
Sbjct: 2   SSGSSGTGEKPFKCVECGKGF-------------------SRRSALNVHHK-LHTGEKPS 41

Query: 176 PCTS 179
             +S
Sbjct: 42  GPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
               + +G K F C ECGK F     L VH  +HTG +P   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K + C  C K F RR  L+ H    HTGE+P   
Sbjct: 2   SSGS-SGTGEKPFKCVECGKGFSRRSALNVH-HKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K PF C +C K F  +  L  H K H+G K    +
Sbjct: 2  SSGSSGTGEK-PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 3  DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
              S TG +P++C  C K F  +     H   HT  K P   
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK-PSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TG +PYQC+ C   F       +H+R+HTGEKP    
Sbjct: 7   GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK+F + +++  H+R HTGEKP    
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 8e-08
 Identities = 21/90 (23%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG KPYQC  CG  F                   SQ S L  H+R          
Sbjct: 3   SGSSGTGGKPYQCNECGKAF-------------------SQTSKLARHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------VHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY+C  C K F        H   HT  K P    
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK-PSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K+F     L +H++ H+G K    +
Sbjct: 2  SSGSSGTGGK-PYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G +PF C  CGK F + + +  H+R HTGEKP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 5e-12
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GE+P+QC+ C   F    H   H+R+HTGEKP   
Sbjct: 7   GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 20/64 (31%)

Query: 116 DHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
               + +GEKP+QCE CG +F                   +Q S+L SH+R  H  +K  
Sbjct: 2   SSGSSGSGEKPFQCEECGKRF-------------------TQNSHLHSHQR-VHTGEKPS 41

Query: 176 PCTS 179
             +S
Sbjct: 42  GPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  K PF CE+C K F    +L  H++ H+G K    +
Sbjct: 3  SGSSGSGEK-PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 3  DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
              S +G +P++C+ C K F       +H   HT  K P   
Sbjct: 2  SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK-PSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 3e-12
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F    H  +HR IHTGEKP    
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK F + + +  H   HTGEKP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 19/90 (21%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   +Q S+L  H+           
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------TQNSHLVRHRG---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K F    +LV+H   H+G K    +
Sbjct: 2  SSGSSGTGEK-PYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 4/33 (12%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTH 36
             S TG +PY+C  C K F    T  +HLV H
Sbjct: 3  SGSSGTGEKPYKCNECGKVF----TQNSHLVRH 31

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY C+ C   FI+    ++H+RIHTGEKP    
Sbjct: 7   GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 16/42 (38%), Positives = 27/42 (64%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK+F+  +++++H+R HTGEKP    
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY CE CG  F                      S LQ H+R  H  +K   
Sbjct: 3   SGSSGTGEKPYNCEECGKAF-------------------IHDSQLQEHQR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P++CE+C K+F     L +H++ H+G K    +
Sbjct: 2  SSGSSGTGEK-PYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY C+ C K F+     + H   HT  K P    
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK-PSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +PF C+ CG +F     +  H R+H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.8 bits (143), Expect = 4e-12
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+P+QC  C   F +     KH R H    P   
Sbjct: 7   GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 7e-09
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
               + +G K F C ECG  F    +L  HL  H    P   
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.4 bits (116), Expect = 2e-08
 Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP+QC+ CG  F                   S   +L  H R +H       
Sbjct: 3   SGSSGTGEKPFQCKECGMNF-------------------SWSCSLFKHLR-SHERTDPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +P++CK C   F    +   HL +H  R  P   
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE-RTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T  K PF C++C  +F    +L +H ++H  +     
Sbjct: 2  SSGSSGTGEK-PFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 2/45 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCD 207
           S    +   +K + C  C   F     L  H++ +H    P    
Sbjct: 2   SSGS-SGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.0 bits (144), Expect = 3e-12
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P++C  CGK+F  K+ +  H RTHTGE     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.0 bits (136), Expect = 3e-11
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TG +PY C+ C   F    +   H R HTGE     
Sbjct: 7   GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 17/90 (18%), Positives = 19/90 (21%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG KPY C  CG  F                     +S L  H R          
Sbjct: 3   SGSSGTGMKPYVCNECGKAF-------------------RSKSYLIIHTR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE     
Sbjct: 34  --------------------THTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S TG +PY C  C K F SK     H  THT      S 
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES-GPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T  K P+ C +C K+F ++  L+ H +TH+G      
Sbjct: 2  SSGSSGTGMK-PYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG R + C  CGK+F++K+ +  H+R H GEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGER Y+C  C   FI       H+RIH GEKP   
Sbjct: 7   GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
               + +G + + C+ECGKAF     L +H  +H G +P   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 17/90 (18%), Positives = 23/90 (25%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGE+ Y+C  CG  F                    Q+S L  H+R          
Sbjct: 3   SGSSGTGERHYECSECGKAF-------------------IQKSTLSMHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                H GE+P   
Sbjct: 34  --------------------IHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG R YEC  C K F+ K T   H   H   K P     
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK-PSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  +  + C +C K+F  +  L  H++ H G K    +
Sbjct: 3  SGSSGTGER-HYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C  CGK +  K  +  H++ HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C+ C   +    +   H+++HTGE+P   
Sbjct: 7   GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+CE CG  +                   + + NL  H++          
Sbjct: 3   SGSSGTGEKPYKCEKCGKGY-------------------NSKFNLDMHQK---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGERP   
Sbjct: 34  --------------------VHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ CEKC K + ++ NL  H+K H+G +    +
Sbjct: 2  SSGSSGTGEK-PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY+C+ C K + SK+    H   HT  + P     
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER-PSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G +P++C  CGK+F   AE+  H+R HTGEKP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GE+PY CD C   F       +H+RIHTGEKP   
Sbjct: 7   GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEKPY C++CG  F                      + L  H+R          
Sbjct: 3   SGSSGSGEKPYVCDYCGKAF-------------------GLSAELVRHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  K P+ C+ C K+F     LV+H++ H+G K    +
Sbjct: 3  SGSSGSGEK-PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S +G +PY C  C K F        H   HT  K P   
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK-PSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
            +G  P+ C  CGK+F RK ++  H+RTH GE     
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 56.4 bits (137), Expect = 2e-11
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GE PY+C  C   F   +    H+R H GE     
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/89 (16%), Positives = 21/89 (23%), Gaps = 49/89 (55%)

Query: 118 ERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPC 177
               +GE PY+C  CG  F                   +++  L SH+R           
Sbjct: 2   SSGSSGENPYECSECGKAF-------------------NRKDQLISHQR----------- 31

Query: 178 TSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                               H GE     
Sbjct: 32  -------------------THAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 38.6 bits (91), Expect = 5e-05
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
            +    P+ C +C K+F  +  L+ H++TH+G      
Sbjct: 4  GSSGEN-PYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 7  SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
            +G  PYEC  C K F  K    +H  TH       S 
Sbjct: 4  GSSGENPYECSECGKAFNRKDQLISHQRTHAGES-GPSS 41

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F    H  +HR IHTGEKP    
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK F + + +  H   HTGEKP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 19/90 (21%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   +Q S+L  H+           
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------TQNSHLARHRG---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K F    +L +H   H+G K    +
Sbjct: 2  SSGSSGTGEK-PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY+C  C K F        H   HT  K P    
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK-PSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C +C+  F    H  +H++ HTGEKP    
Sbjct: 7   GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C+VC K+F +KA +  H++THTGEKP    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 20/62 (32%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C+ C   F                   +Q+++L  H++ TH  +K   
Sbjct: 3   SGSSGTGEKPYECKVCSKAF-------------------TQKAHLAQHQK-THTGEKPSG 42

Query: 177 CT 178
            +
Sbjct: 43  PS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
          +   + T  K P+ C+ C K+F  + +L QH+KTH+G K    + 
Sbjct: 2  SSGSSGTGEK-PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +PF C  CGK+F     +  H R HTGEKP    
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+P+ C  C   F       +HRRIHTGEKP    
Sbjct: 7   GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 16/63 (25%), Positives = 21/63 (33%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP+ C  CG  F                   S    L  H+R  H  +K   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAF-------------------SDHIGLNQHRR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K + C  C KAF     L+ H +  HTGE+P   
Sbjct: 2   SSGS-SGTGEKPFDCIDCGKAFSDHIGLNQH-RRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K PF C  C K+F     L QH + H+G K    +
Sbjct: 2  SSGSSGTGEK-PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +P++C  C K F        H   HT  K P    
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK-PSGPS 44

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 59.6 bits (145), Expect = 4e-12
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 83  LRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQF 136
           + NL  +  V    RP+ C V  C + F R  E+  H R HTG+KP+QC  C   F
Sbjct: 6   MNNLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 57  NLVQHEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEV 114
           NL+ +       + + C    C + F     L  H+ +HTG +PF CR+C ++F R   +
Sbjct: 8   NLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65

Query: 115 KDHERTHT 122
             H RTHT
Sbjct: 66  TTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 55.8 bits (135), Expect = 9e-11
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 156 SQRSNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF 213
              +NL ++        + Y C   SC + F R   L  HI+  HTG++P+QC IC   F
Sbjct: 4   HPMNNLLNYVV-PK--MRPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNF 59

Query: 214 IYPEHFKKHRRIHT 227
              +H   H R HT
Sbjct: 60  SRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 30 KAHLVTHTDRKRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLE 87
            ++V      RP++C  E CD+ F     L +H + H+G K F C  C + F    +L 
Sbjct: 10 LNYVVPKM---RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

Query: 88 VHLAVHT 94
           H+  HT
Sbjct: 67 THIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 198 HTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCEV 236
               RPY C +  C+  F   +   +H RIHTG+KP+ C +
Sbjct: 14  VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI 54

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 5e-07
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 4  HLVSH--TGARPYEC--KTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLV 59
          +L+++     RPY C  ++C + F        H+  HT +K PF C  C ++F    +L 
Sbjct: 8  NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQK-PFQCRICMRNFSRSDHLT 66

Query: 60 QHEKTHS 66
           H +TH+
Sbjct: 67 THIRTHT 73

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GE+PY+C+ C   F    H   H RIHTGEKP   
Sbjct: 7   GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G +P+ C  CGK F + + + +H R HTGEKP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEKPY+C  CG  F                   +Q S+L +H R          
Sbjct: 3   SGSSGSGEKPYKCNECGKVF-------------------TQNSHLTNHWR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
          +   + +  K P+ C +C K F    +L  H + H+G K    + 
Sbjct: 2  SSGSSGSGEK-PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C  CGKSF  K+ ++ H++ HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C  C  +F +    + H++ HTGE+    
Sbjct: 7   GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   + +S L+ H++  H  ++   
Sbjct: 3   SGSSGTGEKPYKCSDCGKSF-------------------TWKSRLRIHQK-CHTGERHSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C  C KSF  +  L  H+K H+G +    +
Sbjct: 2  SSGSSGTGEK-PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY+C  C K+F  K   + H   HT  +       
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER-HSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C+ C K+F  +  L  H K  HTGER    
Sbjct: 2   SSGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F       +H+RIHTGEKP    
Sbjct: 7   GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK+F + +++  H+R HTGEKP    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 9e-08
 Identities = 21/90 (23%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   SQ S L  H+R          
Sbjct: 3   SGSSGTGEKPYKCNECGKAF-------------------SQTSKLARHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C +C K+F     L +H++ H+G K    +
Sbjct: 3  SGSSGTGEK-PYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PY+C  C K F        H   HT  K P    
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK-PSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 88  VHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
              +  TG +P+ C VCGK+F  +  +  H+R H+G+KP    
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 2e-11
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C +C   F + +    H+RIH+G+KP    
Sbjct: 7   GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 18/90 (20%), Positives = 25/90 (27%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   S R +L  H+R          
Sbjct: 3   SGSSGTGEKPYECSVCGKAF-------------------SHRQSLSVHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                H+G++P   
Sbjct: 34  --------------------IHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S TG +PYEC  C K F  + +   H   H+ +K P    
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK-PSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C  C K+F  +Q+L  H++ HSG K    +
Sbjct: 3  SGSSGTGEK-PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG + + C  CGK F R +++  H++ HTGEKP    
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+ Y+C+ C   F       +H++IHTGEKP    
Sbjct: 7   GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 18/90 (20%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEK Y+C  CG  F                   S+ S L  H++          
Sbjct: 3   SGSSGTGEKRYKCNECGKVF-------------------SRNSQLSQHQK---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 13/44 (29%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG + Y+C  C K F        H   HT  K P     
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK-PSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K  + C +C K F     L QH+K H+G K    +
Sbjct: 3  SGSSGTGEK-RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +GE+PY+C  C   F    H  +HRRIHTG +P    
Sbjct: 7   GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-11
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  +G +P+ C  CGK+F R   + +H R HTG +P    
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 8e-08
 Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEKPY+C  CG  F                    + ++L  H+R          
Sbjct: 3   SGSSGSGEKPYKCSECGKAF-------------------HRHTHLNEHRR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTG RP   
Sbjct: 34  --------------------IHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  K P+ C +C K+F+   +L +H + H+G +    +
Sbjct: 3  SGSSGSGEK-PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S +G +PY+C  C K F        H   HT  + P     
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR-PSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 5e-12
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F +  +  +H+RIHTGEKP    
Sbjct: 7   GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK F   + +  H+R HTGEKP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                      S L  H+R  H  +K   
Sbjct: 3   SGSSGTGEKPYKCNECGKVF-------------------RHNSYLSRHQR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE 75
             + T  K P+ C +C K F     L +H++ H+G K    + 
Sbjct: 3  SGSSGTGEK-PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY+C  C K F        H   HT  K P     
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK-PSGPSS 45

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 5e-12
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +GE+P++C  C   F    H   H RIHTGEKP    
Sbjct: 7   GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  +G +PF C+ CGK+F +   +  H R HTGEKP    
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEKP++C+ CG  F                    Q  +L SH R  H  +K   
Sbjct: 3   SGSSGSGEKPFKCKECGKAF-------------------RQNIHLASHLR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + +  K PF C++C K+F    +L  H + H+G K    +
Sbjct: 2  SSGSSGSGEK-PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
             S +G +P++CK C K F       +HL  HT  K P    
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK-PSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.3 bits (142), Expect = 5e-12
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +  + +QC  C   F    H  +H+RIHTGEKP   
Sbjct: 7   GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +  +   C  CG+ F  K+ +  H+R HTGEKP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +  K +QC  CG  F                   + +S+L  H+R  H  +K   
Sbjct: 3   SGSSGSSTKSHQCHECGRGF-------------------TLKSHLNQHQR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  K    C +C + F  + +L QH++ H+G K    +
Sbjct: 3  SGSSGSSTK-SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 4/33 (12%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTH 36
             S +  + ++C  C + F    T K+HL  H
Sbjct: 3  SGSSGSSTKSHQCHECGRGF----TLKSHLNQH 31

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F    +   H+ IHTGEKP    
Sbjct: 7   GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK+F   + +  H+  HTGEKP    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  FR                     SNL +H+   H  +K   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFR-------------------AHSNLTTHQV-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY+C  C K F +      H V HT  K P     
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK-PSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K+F    NL  H+  H+G K    +
Sbjct: 2  SSGSSGTGEK-PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +PF C  CGKS+ ++  +  H+R HTGEKP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 8e-12
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+P++C  C  ++    H  +H+R+HTGEKP   
Sbjct: 7   GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP++C  CG  +                   +QR +L  H+R  H  +K   
Sbjct: 3   SGSSGTGEKPFKCGECGKSY-------------------NQRVHLTQHQR-VHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K PF C +C KS+  + +L QH++ H+G K    +
Sbjct: 3  SGSSGTGEK-PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +P++C  C K++  +     H   HT  K P     
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK-PSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK F R + +  H+  HTGEKP    
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C  C   F    H  +H+ IHTGEKP    
Sbjct: 7   GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 18/90 (20%), Positives = 24/90 (26%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                    + S+L  H+           
Sbjct: 3   SGSSGTGEKPYKCHECGKVF-------------------RRNSHLARHQL---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY+C  C K F        H + HT  K P     
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK-PSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K F    +L +H+  H+G K    +
Sbjct: 2  SSGSSGTGEK-PYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 195 KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            ++  GER ++C  C   F+   +F +HRRIHTGEKP   
Sbjct: 4   GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 8e-12
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +   G R   C  CGK F++ +    H R HTGEKP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
               +  G +   C++CGK F    N   H  +HTG +P   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  GE+ ++C  CG  F                    Q SN   H+R  H  +K   
Sbjct: 3   SGSSGHGERGHRCSDCGKFF-------------------LQASNFIQHRR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             +    +    C  C K F    N +QH + H+G K    +
Sbjct: 3  SGSSGHGER-GHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S  G R + C  C K F+    +  H   HT  K P   
Sbjct: 3  SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK-PSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 8e-12
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P++C  CGK+F   + +  H+  HTGEKP    
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TG +PY C+ C   F        H+ IHTGEKP    
Sbjct: 7   GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 18/90 (20%), Positives = 23/90 (25%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG KPY C  CG  F                   S  S+L +H+           
Sbjct: 3   SGSSGTGVKPYMCNECGKAF-------------------SVYSSLTTHQV---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE+P   
Sbjct: 34  --------------------IHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY C  C K F    +   H V HT  K P     
Sbjct: 3  SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK-PSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + T  K P+ C +C K+F    +L  H+  H+G K    
Sbjct: 2  SSGSSGTGVK-PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 9e-12
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C  C   F       +H+R+HTG++P    
Sbjct: 7   GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK+F   +    H+R HTG++P    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
              + +G K + C ECGKAFG   +   H  +HTG RP   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 18/90 (20%), Positives = 23/90 (25%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                      S+   H+R          
Sbjct: 3   SGSSGTGEKPYKCMECGKAF-------------------GDNSSCTQHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTG+RP   
Sbjct: 34  --------------------LHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY+C  C K F    +   H   HT ++ P     
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR-PSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  K P+ C +C K+F    +  QH++ H+G +    +
Sbjct: 2  SSGSSGTGEK-PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C+ CGK+F +   +  H+R HTGEKP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C  C   F    H  +H+R+HTGEKP   
Sbjct: 7   GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C+ CG  F                   SQ ++L  H+R  H  +K   
Sbjct: 3   SGSSGTGEKPYECKECGKAF-------------------SQTTHLIQHQR-VHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C++C K+F    +L+QH++ H+G K    +
Sbjct: 3  SGSSGTGEK-PYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 4/33 (12%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTH 36
             S TG +PYECK C K F    +   HL+ H
Sbjct: 3  SGSSGTGEKPYECKECGKAF----SQTTHLIQH 31

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 89  HLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +PF C    CG  F R  E+  H R+H+G KP    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 198 HTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+P+ C    C   F   +   +HRR H+G KP    
Sbjct: 7   GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 18/63 (28%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP+ C + G  +RF                 S+   L  H+R +H   K   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRF-----------------SRSDELSRHRR-SHSGVKPSG 44

Query: 177 CTS 179
            +S
Sbjct: 45  PSS 47

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 61  HEKTHSGSKDFVCTE--CGKAFGTLRNLEVHLAVHTGNRPFIC 101
              + +G K F CT   CG  F     L  H   H+G +P   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 31 AHLVTHTDRKRPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   + T  ++PF+C    C   F     L +H ++HSG K    +
Sbjct: 2  SSGSSGT-GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 57.8 bits (139), Expect = 1e-11
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 71  FVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK 125
           ++C ECG        L+ H+  HT  RP+ C  C  SF  K  +  H ++    K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 50.9 bits (121), Expect = 4e-09
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
           +Y C  C    K+  +L  HI+  HT  RPY C  CN +F    +  KH +     K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 46.6 bits (110), Expect = 1e-07
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 45 CEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
          CE+C         L +H +TH+  + + CT C  +F T  NL  H+     
Sbjct: 4  CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.9 bits (108), Expect = 3e-07
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 14 YECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
          Y C+ C          K H+ THTD + P+ C  C+ SF T+ NL +H K+ + SK
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVR-PYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 4e-07
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 99  FICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGS 141
           +IC  CG    + + +K H RTHT  +PY C +C   F+ KG+
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGN 44

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 1  MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKR 41
          ++ H+ +HT  RPY C  C  +F +K     H+ +    K+
Sbjct: 17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
             G++ ++C+ C  TF        H+RIHTGEKP   
Sbjct: 7   GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-11
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +   G + F C  C K+F + + +  H+R HTGEKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              +  G+K ++C  C   F                   +Q S+L  H+R  H  +K   
Sbjct: 3   SGSSGAGKKLFKCNECKKTF-------------------TQSSSLTVHQR-IHTGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
          +   +   +K  F C +C K+F    +L  H++ H+G K    +
Sbjct: 2  SSGSSGAGKK-LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S  G + ++C  CKKTF    +   H   HT  K P   
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK-PSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P  CR CGKSF   +++  H+R HTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+P++C  C  +F +      H+RIHTGE P   
Sbjct: 7   GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 19/90 (21%), Positives = 23/90 (25%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKP++C  CG  F                   S  S L  H+R          
Sbjct: 3   SGSSGTGEKPHECRECGKSF-------------------SFNSQLIVHQR---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTGE P   
Sbjct: 34  --------------------IHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +P+EC+ C K+F        H   HT    P     
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN-PSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P  C +C KSF     L+ H++ H+G      +
Sbjct: 3  SGSSGTGEK-PHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  TG +P+ C  CGK+F  ++ +  H+ TH+GEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            TGE+PY+C+ C   F        H+  H+GEKP   
Sbjct: 7   GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                     RS+L  H+  TH  +K   
Sbjct: 3   SGSSGTGEKPYKCNECGKAF-------------------RARSSLAIHQA-THSGEKPSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PY+C  C K F ++ +   H  TH+  K P     
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK-PSGPSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C  C KAF+ R  L  H +A H+GE+P   
Sbjct: 2   SSGS-SGTGEKPYKCNECGKAFRARSSLAIH-QATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C +C K+F  + +L  H+ THSG K    +
Sbjct: 3  SGSSGTGEK-PYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  TG +P+ C  CGK+F  ++ +  H+  HTG+KP    
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            TGE+PY+C+ C   F        H+ IHTG+KP    
Sbjct: 7   GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 49/90 (54%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TGEKPY+C  CG  F                   S RS+L +H+           
Sbjct: 3   SGSSGTGEKPYECNQCGKAF-------------------SVRSSLTTHQA---------- 33

Query: 177 CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                                HTG++P   
Sbjct: 34  --------------------IHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK 47
             S TG +PYEC  C K F  + +   H   HT +K P     
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK-PSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + T  K P+ C +C K+F  + +L  H+  H+G K    +
Sbjct: 3  SGSSGTGEK-PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  +G +P+ C  CGK+F+ K+ +  HERTH G      
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.6 bits (135), Expect = 4e-11
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +GE+PY+C+ C   FI+      H R H G      
Sbjct: 7   GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 20/61 (32%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEKPY+C  CG  F                     +S L  H+R TH       
Sbjct: 3   SGSSGSGEKPYECNECGKAF-------------------IWKSLLIVHER-THAGVSGPS 42

Query: 177 C 177
            
Sbjct: 43  S 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC 45
             S +G +PYEC  C K F+ K     H  TH       S 
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS-GPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 163 SHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
           S    +   +K Y C  C KAF  + LL  H +  H G      
Sbjct: 2   SSGS-SGSGEKPYECNECGKAFIWKSLLIVH-ERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
          +   + +  K P+ C +C K+F  +  L+ HE+TH+G      
Sbjct: 2  SSGSSGSGEK-PYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 58.1 bits (140), Expect = 2e-11
 Identities = 20/75 (26%), Positives = 26/75 (34%), Gaps = 9/75 (12%)

Query: 64  THSGSKDFVCTECGKAFGTLRNLEVHL-AVHTGNRPFI--------CRVCGKSFVRKAEV 114
                       C + F T+  L  H+   H G             C   GKSF  K ++
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 115 KDHERTHTGEKPYQC 129
            +H R HTGEK    
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 55.0 bits (132), Expect = 3e-10
 Identities = 17/75 (22%), Positives = 21/75 (28%), Gaps = 8/75 (10%)

Query: 168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQ--------CDICNATFIYPEHF 219
                   P  SC + F     L  H+   H G             C     +F      
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 220 KKHRRIHTGEKPYVC 234
             H R+HTGEK    
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 48.0 bits (114), Expect = 1e-07
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 8/75 (10%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHL-VTHTDRKRP-------FSCEKCDKSFYTQQNLV 59
                   K+C +TF + +    H+ + H               C +  KSF  +  LV
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 60 QHEKTHSGSKDFVCT 74
           H + H+G K    +
Sbjct: 80 NHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 17/95 (17%), Positives = 24/95 (25%), Gaps = 28/95 (29%)

Query: 120 THTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP--- 176
               +     + C   F                   S    L +H    H          
Sbjct: 19  IDEAQLSRPKKSCDRTF-------------------STMHELVTHVTMEHVGGPEQNNHV 59

Query: 177 -----CTSCPKAFKRRRLLDYHIKAAHTGERPYQC 206
                C    K+FK +  L  HI+  HTGE+    
Sbjct: 60  CYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 14/91 (15%), Positives = 25/91 (27%), Gaps = 19/91 (20%)

Query: 92  VHTGNRPFICRVCGKSFVRKAEVKDH-ERTHTGEKP---YQCEFCGAQFRFKGSSGTESI 147
           +         + C ++F    E+  H    H G      + C +       K        
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK----- 73

Query: 148 DKLLLCFLSQRSNLQSHKRATHFNDKRYPCT 178
                     +  L +H R  H  +K  P +
Sbjct: 74  ---------AKYKLVNHIR-VHTGEKSGPSS 94

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 57.0 bits (138), Expect = 3e-11
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 61  HEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKD 116
            +   S  +  +C+   CGK +    +L+ H   HTG +PF C    C + F R  E+  
Sbjct: 8   PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

Query: 117 HERTH 121
           H RTH
Sbjct: 68  HRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 84  RNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGS 141
                     +  R  IC    CGK++ + + +K H RTHTGEKP+ C + G + RF  S
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 142 S 142
            
Sbjct: 63  D 63

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 195 KAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCE 235
           +   +  R + C    C  T+    H K H R HTGEKP+ C 
Sbjct: 9   QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS 51

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 45.1 bits (107), Expect = 5e-07
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 4  HLVSHTGARPYECK--TCKKTFVSKYTYKAHLVTHTDRKRPFSC--EKCDKSFYTQQNLV 59
            +  +  R + C    C KT+      KAH  THT  K PFSC  + C++ F     L 
Sbjct: 8  PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK-PFSCSWKGCERRFARSDELS 66

Query: 60 QHEKTH 65
          +H +TH
Sbjct: 67 RHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 158 RSNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATF 213
            S     +       + + C+   C K + +   L  H +  HTGE+P+ C    C   F
Sbjct: 2   SSGSSGPQI-DSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-HTGEKPFSCSWKGCERRF 59

Query: 214 IYPEHFKKHRRIH 226
              +   +HRR H
Sbjct: 60  ARSDELSRHRRTH 72

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.3 bits (134), Expect = 8e-11
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE 235
            +GE+ + CD C   F Y    + H+R+H GEK     
Sbjct: 7   GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCE 130
             +  +G +   C  CGK+F   + ++ H+R H GEK     
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 61  HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
              + SG K   C ECGK F  +  L +H  VH G +    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 20/63 (31%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + +GEK + C+ CG  F                      S L+ H+R  H  +K   
Sbjct: 3   SGSSGSGEKSHTCDECGKNF-------------------CYISALRIHQR-VHMGEKCSG 42

Query: 177 CTS 179
            +S
Sbjct: 43  PSS 45

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 9/38 (23%), Positives = 13/38 (34%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKR 41
             S +G + + C  C K F      + H   H   K 
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC 40

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCT 74
             + +  K   +C++C K+F     L  H++ H G K    +
Sbjct: 3  SGSSGSGEK-SHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 54.9 bits (133), Expect = 9e-11
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKH-RRIHTGEKPYVC 234
            TG++PY+C  C   FI      +H R  HTGEKP   
Sbjct: 7   GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 19/63 (30%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYP 176
              + TG+KPY+C  CG  F                    Q ++L  H R  H  +K   
Sbjct: 3   SGSSGTGKKPYECIECGKAF-------------------IQNTSLIRHWRYYHTGEKPSG 43

Query: 177 CTS 179
            +S
Sbjct: 44  PSS 46

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.9 bits (107), Expect = 4e-07
 Identities = 17/70 (24%), Positives = 20/70 (28%), Gaps = 27/70 (38%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHER 119
               + +G K + C ECGKAF         L  H                          
Sbjct: 2   SSGSSGTGKKPYECIECGKAF----IQNTSLIRH-----------------------WRY 34

Query: 120 THTGEKPYQC 129
            HTGEKP   
Sbjct: 35  YHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 4/33 (12%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTH 36
             S TG +PYEC  C K F         L+ H
Sbjct: 3  SGSSGTGKKPYECIECGKAF----IQNTSLIRH 31

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 54.9 bits (133), Expect = 9e-11
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 195 KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
            +  +G+R Y+C  C  +F        H RIHTG  P 
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 53.3 bits (129), Expect = 3e-10
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPY 127
            +G R + C+ CGKSF +K  +  HER HTG  P 
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 15/87 (17%), Positives = 23/87 (26%), Gaps = 49/87 (56%)

Query: 118 ERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPC 177
               +G++ Y+C+ CG  FR                   Q+ +L  H+R           
Sbjct: 2   SSGSSGQRVYECQECGKSFR-------------------QKGSLTLHER----------- 31

Query: 178 TSCPKAFKRRRLLDYHIKAAHTGERPY 204
                               HTG  P 
Sbjct: 32  -------------------IHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 7  SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRK 40
            +G R YEC+ C K+F  K +   H   HT   
Sbjct: 4  GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.5 bits (132), Expect = 1e-10
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPY 127
                 G +P+ C  CGK+F +K  +  H R HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
             GE+PY+CD C   F        H R+HTG  P 
Sbjct: 6   SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPF 99
             +  G K + C +CGKAF    +L VH+ VHTG+ P 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 15/59 (25%), Positives = 20/59 (33%), Gaps = 20/59 (33%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRY 175
              +  GEKPY+C+ CG  F                   SQ+ +L  H R  H      
Sbjct: 2   SSGSSGGEKPYRCDQCGKAF-------------------SQKGSLIVHIR-VHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
              +    K P+ C++C K+F  + +L+ H + H+GS 
Sbjct: 1  GSSGSSGGEK-PYRCDQCGKAFSQKGSLIVHIRVHTGSG 38

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFS 44
             S  G +PY C  C K F  K +   H+  HT    P S
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG-PSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 164 HKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPY 204
               +   +K Y C  C KAF ++  L  HI+  HTG  P 
Sbjct: 2   SSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 53.4 bits (129), Expect = 3e-10
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPY 127
             G  P++C  CGKSF ++  +  H+R+ +   P 
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 10/38 (26%), Positives = 14/38 (36%)

Query: 195 KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
             +  GE PY C  C  +F        H+R  +   P 
Sbjct: 3   SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPF 99
             +  G   ++C +CGK+F    +L VH    + + P 
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.4 bits (90), Expect = 7e-05
 Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 19/50 (38%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKR 166
              +  GE PY C  CG  F                   +QR +L  H+R
Sbjct: 2   SSGSSGGETPYLCGQCGKSF-------------------TQRGSLAVHQR 32

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.0 bits (89), Expect = 9e-05
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 7  SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFS 44
          S  G  PY C  C K+F  + +   H  + + +  P S
Sbjct: 5  SSGGETPYLCGQCGKSFTQRGSLAVHQRSCS-QSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
           P+ C +C KSF  + +L  H+++ S S 
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.2 bits (123), Expect = 2e-09
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 195 KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            +  +GE+PY C  C  TF       +H+++HT +     
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.9 bits (117), Expect = 1e-08
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 91  AVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
           +  +G +P+ C  C ++F     +  H++ HT +     
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
            +  K P+SC +C ++F     LVQH+K H+ 
Sbjct: 4  GSSGEK-PYSCAECKETFSDNNRLVQHQKMHTV 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 11/39 (28%), Positives = 14/39 (35%)

Query: 63  KTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
              SG K + C EC + F     L  H  +HT       
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)

Query: 7  SHTGARPYECKTCKKTFVSKYTYKAHLVTH 36
            +G +PY C  CK+TF    +    LV H
Sbjct: 4  GSSGEKPYSCAECKETF----SDNNRLVQH 29

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
            T  + Y C+ C   F    H  +H++IHT +     
Sbjct: 7   GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQC 129
             +  T ++ + C  CGK+F R   +  H++ HT +     
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.5 bits (106), Expect = 6e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFIC 101
               + + SK + C ECGKAF  + +L  H  +HT       
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 7/22 (31%), Positives = 8/22 (36%)

Query: 116 DHERTHTGEKPYQCEFCGAQFR 137
               + T  K Y C  CG  F 
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFT 23

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 3  DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFS 44
              S T ++ Y C  C K F   +    H   HT +  P S
Sbjct: 2  SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
             + TD K  ++C +C K+F    +L +H+K H+ 
Sbjct: 3  SGSSGTDSK-SYNCNECGKAFTRIFHLTRHQKIHTR 37

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 49.2 bits (117), Expect = 1e-08
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFC 132
               +   C +CGK F     +  H+ +H+GEKPY     
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 48.4 bits (115), Expect = 2e-08
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC 234
           +    +   C+IC   F    H  +H+  H+GEKPY  
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 41.5 bits (97), Expect = 8e-06
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 63  KTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVC 104
            +    K   C  CGK F  + +L  H   H+G +P+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNA 211
           K+  C  C K F+    L+ H K +H+GE+PY     + 
Sbjct: 11  KQVACEICGKIFRDVYHLNRH-KLSHSGEKPYSSGPSSG 48

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 40 KRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTEC 76
          ++  +CE C K F    +L +H+ +HSG K +     
Sbjct: 10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.4 bits (109), Expect = 4e-07
 Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 3/85 (3%)

Query: 36  HTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
             + K  + C  C+    +      HE+    +   VC  C   F +    + H +    
Sbjct: 10  PVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHES-KCE 66

Query: 96  NRPFICRVCGKSFVRKAEVKDHERT 120
            +   C  C ++F     +  H+  
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.0 bits (108), Expect = 7e-07
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 10 GARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
              Y+C+ C     S     +H       +    C  C   F++ +   +HE      K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC---RNAAVCPYCSLRFFSPELKQEHESKCEYKK 69

Query: 70 DFVCTECGKAFGTLRNLEVH-LAVHTGN 96
             C EC + F +  ++  H + VH  N
Sbjct: 70 -LTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 4e-05
 Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 3/82 (3%)

Query: 60  QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHER 119
                    + + C  C     +L     H  +       +C  C   F      ++HE 
Sbjct: 6   SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE- 62

Query: 120 THTGEKPYQCEFCGAQFRFKGS 141
           +    K   C  C   F+   S
Sbjct: 63  SKCEYKKLTCLECMRTFKSSFS 84

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 17/105 (16%), Positives = 26/105 (24%), Gaps = 23/105 (21%)

Query: 95  GNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCF 154
               + CR+C        E   HER         C +C  +F                  
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPE-------------- 56

Query: 155 LSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHT 199
                     +  +    K+  C  C + FK    +  H    H 
Sbjct: 57  -------LKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.5 bits (105), Expect = 5e-07
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 195 KAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP 231
            ++  GE P++C  C+  F    +  +H R H  +  
Sbjct: 4   GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (102), Expect = 1e-06
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKP 126
             +   G  PF C  C + F ++  +  HERTH  +  
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.8 bits (93), Expect = 3e-05
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 31 AHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
          +   +      PF C KCD+ F  +  LVQHE+TH+   
Sbjct: 2  SSGSSGAGEN-PFKCSKCDRVFTQRNYLVQHERTHARKS 39

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 8/39 (20%), Positives = 13/39 (33%)

Query: 60 QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRP 98
              + +G   F C++C + F     L  H   H     
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 35.6 bits (82), Expect = 7e-04
 Identities = 10/39 (25%), Positives = 15/39 (38%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRP 42
             S  G  P++C  C + F  +     H  TH  +  P
Sbjct: 3  SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 3   DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQH- 61
             L++      + C  C   F S  + K H+           C  C K F +  + + H 
Sbjct: 64  YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDHV 120

Query: 62  EKTHSG 67
            K H+ 
Sbjct: 121 CKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 14/108 (12%), Positives = 26/108 (24%), Gaps = 3/108 (2%)

Query: 30  KAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVH 89
            +    +    +        +       L   +K    +         +      +    
Sbjct: 7   DSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSYLYR 65

Query: 90  LAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFR 137
           L        F+C +C   F     +K H R    E    C  C  +F 
Sbjct: 66  LLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFT 111

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 40.4 bits (95), Expect = 1e-05
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEK 125
           R F+C VC ++F R+  +K H R+HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEK 230
           R + C++C   F   EH K+H R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 54/205 (26%)

Query: 42  PFSCEKCDKSFYTQQNLVQHEKTHSG----SKDFVCTECGKAFGTLRN----LEVH--LA 91
           P   E+   S  T+  + Q ++ ++     +K  V     + +  LR     L     + 
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL--QPYLKLRQALLELRPAKNVL 154

Query: 92  VH--TGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQF--RFKGSSGTESI 147
           +    G         GK++V       ++         QC+     F    K  +  E++
Sbjct: 155 IDGVLG--------SGKTWVALDVCLSYKV--------QCKMDFKIFWLNLKNCNSPETV 198

Query: 148 DKLLLCFLSQ-RSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQ- 205
            ++L   L Q   N  S  R+ H ++ +    S       RRLL           +PY+ 
Sbjct: 199 LEMLQKLLYQIDPNWTS--RSDHSSNIKLRIHSIQAEL--RRLLK---------SKPYEN 245

Query: 206 C-----DICNATFIYPEHFKKHRRI 225
           C     ++ NA       F    +I
Sbjct: 246 CLLVLLNVQNAKAW--NAFNLSCKI 268

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTH 121
                TG +PF C  C +SF R   +  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIH 226
            TG +P+QC  C+ +F   +H   HR+ H
Sbjct: 6   STGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 9/20 (45%), Positives = 10/20 (50%)

Query: 117 HERTHTGEKPYQCEFCGAQF 136
             R  TG KP+QC  C   F
Sbjct: 2   STRGSTGIKPFQCPDCDRSF 21

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 2/31 (6%)

Query: 97  RPFICRV--CGKSFVRKAEVKDHERTHTGEK 125
           RPF+C    CGK F R  E++ H+RTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 43.7 bits (102), Expect = 5e-05
 Identities = 10/52 (19%), Positives = 15/52 (28%)

Query: 42  PFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVH 93
               E            V    T S    + C  C     +  +L+ H+A H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 38.6 bits (89), Expect = 2e-04
 Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 4/82 (4%)

Query: 159 SNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGER---PYQCDICNATFIY 215
            +   H +     +  Y C  C        +  +H+ + H        Y C  CN     
Sbjct: 3   HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62

Query: 216 PEHFKKH-RRIHTGEKPYVCEV 236
            +   +H  + H GE+ +   +
Sbjct: 63  YDALSEHNLKYHPGEENFKLTM 84

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	275
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.98
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.78
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.76
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.63
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.58
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.53
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.51
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.51
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.5
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.5
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.49
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.49
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.49
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.48
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.47
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.46
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.45
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.44
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.44
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.44
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.43
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.43
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.36
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.29
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.25
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.23
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.22
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.21
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.04
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.04
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.02
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.98
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.97
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.94
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.91
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.9
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.88
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.87
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.86
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.84
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.81
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.79
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.78
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.78
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.78
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.78
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.74
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.67
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.64
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.6
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.59
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.58
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.51
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.5
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.5
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.46
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.4
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.37
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.35
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.34
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.33
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.32
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.31
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.3
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.3
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.28
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.27
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.25
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.25
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.52
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.21
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.49
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.14
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.12
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.12
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.11
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.29
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.0
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.99
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.97
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.92
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.92
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.92
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.88
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.87
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.86
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.84
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.84
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.83
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.82
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.79
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.79
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.98
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.76
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.76
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.74
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.72
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.9
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.84
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.62
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.52
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.15
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.09
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.4
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.34
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.21
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.15
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.02
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.99
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.87
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.57
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	91.05
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	90.92
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	90.65
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.4
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.36
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.28
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	87.99
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	87.06
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	86.11
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.96
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	84.84
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	84.73
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.46
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	82.18

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=8.4e-39  Score=243.53  Aligned_cols=183  Identities=42%  Similarity=0.894  Sum_probs=89.7

Q ss_pred             HHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHhhcCCCCccCCccccc
Q psy12834         28 TYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKS  107 (275)
Q Consensus        28 ~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~  107 (275)
                      .|..|+..+.+ +++|.|+.|++.|.+...|..|++.|.+.++|.|+.|++.|.+...|..|+..|.++++|.|+.|++.
T Consensus         8 ~l~~h~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   86 (190)
T 2i13_A            8 SSVAQAALEPG-EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS   86 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             cchhhhhhcCC-CCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc
Confidence            44455555443 44566666666666666666666665555566666666666666666666666666666666666666


Q ss_pred             ccChhHHHHHHhhccCCCCccccccccccccccCCCcccccccccccccccchHHHHHhhcCCCCCCCCCCCChhhccCh
Q psy12834        108 FVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRR  187 (275)
Q Consensus       108 f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~  187 (275)
                      |.+...|..|++.|+++++|.|+.|++.|                   .+...|..|++ .|.++++|.|+.|++.|.+.
T Consensus        87 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-------------------~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~  146 (190)
T 2i13_A           87 FSQRANLRAHQRTHTGEKPYACPECGKSF-------------------SQLAHLRAHQR-THTGEKPYKCPECGKSFSRE  146 (190)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECTTTCCEE-------------------SSHHHHHHHHH-HHHCCCCEECTTTCCEESCH
T ss_pred             cCCHHHHHHHHHhcCCCCCCcCCCCCCcc-------------------CCHHHHHHHHH-HhCCCCCeECCCCCcccCCH
Confidence            66666666666655555555555555555                   44445555554 34455555566666666666


Q ss_pred             hhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCce
Q psy12834        188 RLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY  232 (275)
Q Consensus       188 ~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  232 (275)
                      ..|..|++ .|.++++|.|+.|++.|.+...|..|+++|++++||
T Consensus       147 ~~L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          147 DNLHTHQR-THTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHHHH-hcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            66666655 455555666666666666666666666666665554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=6.1e-38  Score=238.76  Aligned_cols=182  Identities=42%  Similarity=0.894  Sum_probs=147.0

Q ss_pred             ChhhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhc
Q psy12834          1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAF   80 (275)
Q Consensus         1 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f   80 (275)
                      |..|...+.++++|.|+.|++.|.+...|..|++.|.+ +++|.|+.|++.|.+...|..|++.|.+.++|.|+.|++.|
T Consensus         9 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A            9 SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTG-EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             ----------------------CCSSHHHHHGGGCC----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             chhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCC-CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            46688889999999999999999999999999999886 67999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHhhcCCCCccCCcccccccChhHHHHHHhhccCCCCccccccccccccccCCCcccccccccccccccch
Q psy12834         81 GTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSN  160 (275)
Q Consensus        81 ~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
                      .+...|..|+..|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|                   ...+.
T Consensus        88 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-------------------~~~~~  148 (190)
T 2i13_A           88 SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSF-------------------SREDN  148 (190)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE-------------------SCHHH
T ss_pred             CCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCccc-------------------CCHHH
Confidence            99999999999999999999999999999999999999999999999999999999                   78899


Q ss_pred             HHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCc
Q psy12834        161 LQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPY  204 (275)
Q Consensus       161 ~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  204 (275)
                      |..|++ .|.++++|.|+.|++.|.+...|..|++ .|.+++||
T Consensus       149 L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~k~~  190 (190)
T 2i13_A          149 LHTHQR-THTGEKPYKCPECGKSFSRRDALNVHQR-THTGKKTS  190 (190)
T ss_dssp             HHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHT-TC------
T ss_pred             HHHHHH-hcCCCCCeECCCCCCccCCHHHHHHHHH-hcCCCCCC
Confidence            999998 7889999999999999999999999988 78888775

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.98  E-value=5.2e-32  Score=205.95  Aligned_cols=164  Identities=34%  Similarity=0.699  Sum_probs=102.5

Q ss_pred             Ccccc--CcchhhcCChHHHHHHHHhhcCCCCccC--CcccccccChhHHHHHHhhccCCCCcccc--ccccccccccCC
Q psy12834         69 KDFVC--TECGKAFGTLRNLEVHLAVHTGNRPFIC--RVCGKSFVRKAEVKDHERTHTGEKPYQCE--FCGAQFRFKGSS  142 (275)
Q Consensus        69 ~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~c~--~c~~~~~~~~~~  142 (275)
                      ++|.|  +.|++.|.+...|..|+..|.++++|.|  ..|++.|.+...|..|++.|.++++|.|+  .|++.|      
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f------   84 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF------   84 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE------
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc------
Confidence            34555  3455555555555555555555555555  45555555555555555555555555555  555555      


Q ss_pred             CcccccccccccccccchHHHHHhhcC-CCCCCCCC--CCChhhccChhhHHHHHHhhcCCCCCccccc--ccccCCChh
Q psy12834        143 GTESIDKLLLCFLSQRSNLQSHKRATH-FNDKRYPC--TSCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPE  217 (275)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~h~~~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~  217 (275)
                                   .+...|..|+...| .++++|.|  +.|++.|.+...|..|++ .|.++++|.|+.  |++.|.+..
T Consensus        85 -------------~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~F~~~~  150 (190)
T 1tf6_A           85 -------------TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPS  150 (190)
T ss_dssp             -------------SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG-GGSSSCSSBCCSSSCCCBCSSHH
T ss_pred             -------------CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCCchhcCHH
Confidence                         44455555553344 35566777  667777777777777766 577777777766  777777777


Q ss_pred             HHHHHHHhhcCCCceeCcc---cchhhhhhhHHHhhhcccc
Q psy12834        218 HFKKHRRIHTGEKPYVCEV---RLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       218 ~l~~H~~~h~~~~~~~C~~---C~~~~~~~~~~~~H~~~~~  255 (275)
                      .|..|+++|++   |.|..   |++.|.....|..|++.|+
T Consensus       151 ~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          151 RLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             HHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            77777777776   66777   7777777777777776554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=2.4e-31  Score=202.28  Aligned_cols=165  Identities=32%  Similarity=0.597  Sum_probs=97.8

Q ss_pred             CCccc--ccchhhcccchHHHHHHhhhcCCCcccc--CcchhhcCChHHHHHHHHhhcCCCCccCC--cccccccChhHH
Q psy12834         41 RPFSC--EKCDKSFYTQQNLVQHEKTHSGSKDFVC--TECGKAFGTLRNLEVHLAVHTGNRPFICR--VCGKSFVRKAEV  114 (275)
Q Consensus        41 ~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l  114 (275)
                      ++|.|  +.|++.|.+...|..|++.|.+.++|.|  +.|++.|.+...|..|+..|.++++|.|.  .|++.|.+...|
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            34444  3444444444444444444444445555  44555555555555555555555555555  455555555555


Q ss_pred             HHHH-hhc-cCCCCccc--cccccccccccCCCcccccccccccccccchHHHHHhhcCCCCCCCCCCC--ChhhccChh
Q psy12834        115 KDHE-RTH-TGEKPYQC--EFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTS--CPKAFKRRR  188 (275)
Q Consensus       115 ~~H~-~~~-~~~~~~~c--~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~--C~~~f~~~~  188 (275)
                      ..|+ +.| .++.+|.|  +.|++.|                   ...+.|..|++ .|.++++|.|+.  |++.|.+..
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f-------------------~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~F~~~~  150 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAF-------------------KKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPS  150 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEEC-------------------SSHHHHHHHHG-GGSSSCSSBCCSSSCCCBCSSHH
T ss_pred             HHHHHHhcCCCcceeeCCCCCCcccc-------------------CCHHHHHHHHH-HhCCCCCccCCCCCCCchhcCHH
Confidence            5555 333 23455556  5566666                   45555666655 466667777766  777777778


Q ss_pred             hHHHHHHhhcCCCCCccccc---ccccCCChhHHHHHHHhhcCC
Q psy12834        189 LLDYHIKAAHTGERPYQCDI---CNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       189 ~l~~H~~~~H~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      .|..|++ .|.+   |.|+.   |++.|.+...|..|+++|+++
T Consensus       151 ~L~~H~~-~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          151 RLKRHEK-VHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHT-SSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHHHH-HhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            8888876 4555   77877   888888888888888877764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2.5e-27  Score=174.13  Aligned_cols=57  Identities=30%  Similarity=0.688  Sum_probs=25.4

Q ss_pred             CCCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCccccc--ccccCCChhHHHHHHHhhc
Q psy12834        171 NDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       171 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  227 (275)
                      ++++|.|+.  |++.|.+...|..|++..|.++++|.|+.  |++.|.+...|..|+++|+
T Consensus        94 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           94 GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             TCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            333444443  44444444444444423444444444444  4444444444444444443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2.3e-26  Score=168.98  Aligned_cols=144  Identities=35%  Similarity=0.663  Sum_probs=113.4

Q ss_pred             CceecccccccccCHHHHHHHHHh---hcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHH
Q psy12834         12 RPYECKTCKKTFVSKYTYKAHLVT---HTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEV   88 (275)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~H~~~---~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~   88 (275)
                      .+|.|+.|++.|.+...|..|++.   |. ++++|.|++|+                       |..|++.|.+...|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~-~~~~~~C~~c~-----------------------C~~c~~~f~~~~~l~~   57 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHG-ERKEFVCHWGG-----------------------CSRELRPFKAQYMLVV   57 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSS-CSSCCCCCBTT-----------------------CTTTTCCCSSHHHHHH
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCC-CCcceeCCCCC-----------------------ccchhhhhhhHHHHHH
Confidence            456777777777777777777763   33 34566666552                       5556688888888888


Q ss_pred             HHHhhcCCCCccCCc--ccccccChhHHHHHHhhccCCCCccccc--cccccccccCCCcccccccccccccccchHHHH
Q psy12834         89 HLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCEF--CGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSH  164 (275)
Q Consensus        89 H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  164 (275)
                      |+..|.++++|.|++  |++.|.+...|..|++.|+++++|.|+.  |++.|                   ...+.|..|
T Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f-------------------~~~~~L~~H  118 (155)
T 2gli_A           58 HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF-------------------SNASDRAKH  118 (155)
T ss_dssp             HTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEE-------------------SSSSTTHHH
T ss_pred             HHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCcc-------------------CCHHHHHHH
Confidence            888888888888875  8888888888888888888888888887  88888                   677888888


Q ss_pred             HhhcCCCCCCCCCCC--ChhhccChhhHHHHHHhhc
Q psy12834        165 KRATHFNDKRYPCTS--CPKAFKRRRLLDYHIKAAH  198 (275)
Q Consensus       165 ~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H  198 (275)
                      +...|.++++|.|+.  |++.|.+...|..|++++|
T Consensus       119 ~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          119 QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            855888899999988  9999999999999988654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=1.2e-23  Score=154.41  Aligned_cols=124  Identities=30%  Similarity=0.558  Sum_probs=114.7

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHHhhcCCCCC--------cccccchhhcccchHHHHHHhhhcCCCccccCc--c
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRP--------FSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE--C   76 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C   76 (275)
                      +.....+|.|+.|++.|.+...|..|++.++....+        |.|..|++.|.+...|..|++.|.+.++|.|+.  |
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            445678899999999999999999999984443433        899999999999999999999999999999998  9


Q ss_pred             hhhcCChHHHHHHHHhhcCCCCccCCc--ccccccChhHHHHHHhhccCCCCcccc
Q psy12834         77 GKAFGTLRNLEVHLAVHTGNRPFICRV--CGKSFVRKAEVKDHERTHTGEKPYQCE  130 (275)
Q Consensus        77 ~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~c~  130 (275)
                      ++.|.....|..|++.|+++++|.|.+  |++.|.....|..|++.|+++++|.|+
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999999997  999999999999999999999999885

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=6.7e-24  Score=149.77  Aligned_cols=114  Identities=26%  Similarity=0.502  Sum_probs=106.1

Q ss_pred             cCCCCccccccccccccccCCCcccccccccccccccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhh--cC
Q psy12834        122 TGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAA--HT  199 (275)
Q Consensus       122 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~--H~  199 (275)
                      .++++|.|+.|++.|                   .....|..|++ .|.++++|.|+.|++.|.+...|..|++..  |.
T Consensus         3 ~~~~~~~C~~C~~~f-------------------~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKF-------------------LSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCC-------------------SSHHHHHHHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcC-------------------CCHHHHHHHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCC
Confidence            467889999999999                   78899999998 788999999999999999999999999863  67


Q ss_pred             CCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhcccc
Q psy12834        200 GERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       200 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~  255 (275)
                      ++++|.|+.|++.|.+...|..|+++|+++++|.|.+|++.|...+.|..|++..|
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            88999999999999999999999999999999999999999999999999997443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=2.9e-23  Score=146.51  Aligned_cols=115  Identities=36%  Similarity=0.823  Sum_probs=106.8

Q ss_pred             CCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhh---hcCCCccccCcchhhcCChHH
Q psy12834          9 TGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKT---HSGSKDFVCTECGKAFGTLRN   85 (275)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---~~~~~~~~C~~C~~~f~~~~~   85 (275)
                      +++++|.|+.|++.|.+...|..|++.|.+ +++|.|+.|++.|.+...|..|+..   +.+.++|.|++|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG-EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS-CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC-CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            578899999999999999999999999986 6799999999999999999999986   457789999999999999999


Q ss_pred             HHHHHHhhcCCCCccCCcccccccChhHHHHHHhh-ccCC
Q psy12834         86 LEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERT-HTGE  124 (275)
Q Consensus        86 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~  124 (275)
                      |..|+..|+++++|.|..|++.|.....|..|++. |.++
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999999999999999999999985 4443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=5.2e-24  Score=151.24  Aligned_cols=108  Identities=22%  Similarity=0.503  Sum_probs=96.5

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCC
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGT   82 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~   82 (275)
                      .|.+++.|+++|.|++|++.|.+...|..|+++|.+ +++|.|.+|++.|...+.|..|++.|.++++|.|++|++.|..
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW-EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC-CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC-CCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            357788999999999999999999999999999985 7799999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhcCCC------CccCCcccccccCh
Q psy12834         83 LRNLEVHLAVHTGNR------PFICRVCGKSFVRK  111 (275)
Q Consensus        83 ~~~l~~H~~~~~~~~------~~~C~~C~~~f~~~  111 (275)
                      ...|..|++.++++.      +|.|..|+..|...
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999999988764      47888888776543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=2.7e-23  Score=145.54  Aligned_cols=112  Identities=32%  Similarity=0.786  Sum_probs=106.7

Q ss_pred             CCCCceeccc--ccccccCHHHHHHHHHhhcCCCCCcccc--cchhhcccchHHHHHHhhhcCCCccccCcchhhcCChH
Q psy12834          9 TGARPYECKT--CKKTFVSKYTYKAHLVTHTDRKRPFSCE--KCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLR   84 (275)
Q Consensus         9 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~   84 (275)
                      +++++|.|+.  |++.|.+...|..|++.|.+ +++|.|+  .|++.|.+...|..|++.|.+.++|.|+.|++.|....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            5788999997  99999999999999999986 6799999  79999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCccC--CcccccccChhHHHHHHhhc
Q psy12834         85 NLEVHLAVHTGNRPFIC--RVCGKSFVRKAEVKDHERTH  121 (275)
Q Consensus        85 ~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  121 (275)
                      .|..|+..|.++++|.|  +.|++.|.+...|..|++.|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=3.5e-23  Score=146.10  Aligned_cols=116  Identities=37%  Similarity=0.727  Sum_probs=103.7

Q ss_pred             CCCceecc--cccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCc--chhhcCChHH
Q psy12834         10 GARPYECK--TCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTE--CGKAFGTLRN   85 (275)
Q Consensus        10 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~   85 (275)
                      ++++|.|+  .|++.|.+...|..|++.|  ++++|.|..|++.|.+...|..|++.|.+.++|.|+.  |++.|.....
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH--GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG--SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc--CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHH
Confidence            45789999  8999999999999999998  3679999999999999999999999999999999986  9999999999


Q ss_pred             HHHHHHhhcCCCCccCC--cccccccChhHHHHHHhhccCCCCc
Q psy12834         86 LEVHLAVHTGNRPFICR--VCGKSFVRKAEVKDHERTHTGEKPY  127 (275)
Q Consensus        86 l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~  127 (275)
                      |..|+..|.++++|.|+  .|++.|.+...|..|++.|++++++
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            99999999999999996  5999999999999999999988764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=2.1e-23  Score=146.11  Aligned_cols=112  Identities=34%  Similarity=0.733  Sum_probs=105.0

Q ss_pred             cCCCCccccc--cccccccccCCCcccccccccccccccchHHHHHhhcCCCCCCCCCC--CChhhccChhhHHHHHHhh
Q psy12834        122 TGEKPYQCEF--CGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAA  197 (275)
Q Consensus       122 ~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~  197 (275)
                      .++++|.|+.  |++.|                   .....|..|++ .|.++++|.|+  .|++.|.+...|..|++ .
T Consensus         2 ~~~~~~~C~~~~C~~~f-------------------~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~   60 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRY-------------------FKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQR-R   60 (119)
T ss_dssp             CSSCCBCCCSTTSCCCB-------------------SCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHH-H
T ss_pred             CCCeeeeCCCCCCcchh-------------------CCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHH-H
Confidence            4678999987  99999                   78899999998 78899999999  79999999999999988 6


Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC--cccchhhhhhhHHHhhhccc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC--EVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~~~~~~~~~~H~~~~  254 (275)
                      |.++++|.|+.|++.|.+...|..|++.|+++++|.|  +.|++.|...+.|..|++.|
T Consensus        61 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           61 HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            8889999999999999999999999999999999999  89999999999999999754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=7.7e-23  Score=144.30  Aligned_cols=114  Identities=34%  Similarity=0.652  Sum_probs=70.7

Q ss_pred             CCccCC--cccccccChhHHHHHHhhccCCCCccccccccccccccCCCcccccccccccccccchHHHHHhhcCCCCCC
Q psy12834         97 RPFICR--VCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKR  174 (275)
Q Consensus        97 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~  174 (275)
                      ++|.|+  .|++.|.+...|..|++.| ++++|.|+.|++.|                   .....|..|++ .|.++++
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f-------------------~~~~~l~~H~~-~h~~~~~   62 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAF-------------------VESSKLKRHQL-VHTGEKP   62 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEE-------------------SSHHHHHHHGG-GTSCCCC
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchh-------------------CCHHHHHHHHH-HcCCCCC
Confidence            455665  5666666666666666555 55556666666666                   45555666655 4556666


Q ss_pred             CCCCC--ChhhccChhhHHHHHHhhcCCCCCcccc--cccccCCChhHHHHHHHhhcCCCce
Q psy12834        175 YPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPY  232 (275)
Q Consensus       175 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  232 (275)
                      |.|+.  |++.|.+...|..|++ .|.++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        63 ~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           63 FQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHH-HHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             eeCCCCCCcCccCCHHHHHHHHH-HhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            77764  7777777777777765 56666777775  3777777777777777777776654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=7e-24  Score=150.59  Aligned_cols=108  Identities=27%  Similarity=0.436  Sum_probs=96.2

Q ss_pred             HHHhhccCCCCccccccccccccccCCCcccccccccccccccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHH
Q psy12834        116 DHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIK  195 (275)
Q Consensus       116 ~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  195 (275)
                      .|..++.|+++|.|+.|++.|                   ...+.|..|++ .|.++++|.|+.|++.|.+...|..|++
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F-------------------~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~   71 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSY-------------------VCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEI   71 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEE-------------------SCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHHH
T ss_pred             hceeecCCCcCeECCCCCCCc-------------------CCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhcc
Confidence            345678899999999999999                   78899999998 7999999999999999999999999987


Q ss_pred             hhcCCCCCcccccccccCCChhHHHHHHHhhcCCC------ceeCcccchhhhhh
Q psy12834        196 AAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK------PYVCEVRLAVFYYV  244 (275)
Q Consensus       196 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~------~~~C~~C~~~~~~~  244 (275)
                       .|++++||.|+.|++.|.+...|..|+++|++++      +|+|..|+..|...
T Consensus        72 -~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           72 -HHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             -HHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             -ccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence             7999999999999999999999999999988764      59999999877543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=7.7e-23  Score=150.07  Aligned_cols=78  Identities=35%  Similarity=0.711  Sum_probs=48.0

Q ss_pred             cccchHHHHHhhcCCCCCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCccccc--ccccCCChhHHHHHHHhhcCCCc
Q psy12834        156 SQRSNLQSHKRATHFNDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKP  231 (275)
Q Consensus       156 ~~~~~~~~h~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~  231 (275)
                      .....|..|++ .|.++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|+++|+++++
T Consensus        73 ~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A           73 KAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             SSHHHHHHHTH-HHHCCCSEECSCTTTCCEESCHHHHHHHHT-TTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             CCHHHHHHHHH-hcCCCCcccCCcCCCCCccCCHHHHHHHHH-hhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            34444444444 344555566655  6666666666666655 566666666665  66666666666666666666666


Q ss_pred             eeCc
Q psy12834        232 YVCE  235 (275)
Q Consensus       232 ~~C~  235 (275)
                      |.|.
T Consensus       151 ~~c~  154 (155)
T 2rpc_A          151 GPSS  154 (155)
T ss_dssp             SCSC
T ss_pred             CCCC
Confidence            6664

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=7.6e-20  Score=122.82  Aligned_cols=87  Identities=26%  Similarity=0.521  Sum_probs=82.2

Q ss_pred             CCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHH
Q psy12834        169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLF  248 (275)
Q Consensus       169 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~  248 (275)
                      ..++++|.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.....|..|++.|+++++|.|.+|++.|...+.|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            467889999999999999999999988 7888999999999999999999999999999999999999999999999999


Q ss_pred             hhhccccc
Q psy12834        249 NMIQPKRF  256 (275)
Q Consensus       249 ~H~~~~~~  256 (275)
                      .|++.|+.
T Consensus        82 ~H~~~h~~   89 (96)
T 2dmd_A           82 VHLRSHTG   89 (96)
T ss_dssp             HHHTTCCS
T ss_pred             HHHHHhcC
Confidence            99987653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=8.9e-20  Score=118.74  Aligned_cols=81  Identities=36%  Similarity=0.655  Sum_probs=77.1

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhcc
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQP  253 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~  253 (275)
                      ||.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.+...|..|++.|+++++|.|..|++.|...+.|..|++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            5899999999999999999998 688899999999999999999999999999999999999999999999999999986


Q ss_pred             cc
Q psy12834        254 KR  255 (275)
Q Consensus       254 ~~  255 (275)
                      |.
T Consensus        80 H~   81 (82)
T 2kmk_A           80 HT   81 (82)
T ss_dssp             HC
T ss_pred             hC
Confidence            53

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=7e-20  Score=126.22  Aligned_cols=90  Identities=32%  Similarity=0.667  Sum_probs=84.8

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHH
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCL  247 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~  247 (275)
                      .|.++++|.| .|++.|.+...|..|++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            5788999999 99999999999999988 788899999999999999999999999999999999999999999999999


Q ss_pred             HhhhcccccccC
Q psy12834        248 FNMIQPKRFRLG  259 (275)
Q Consensus       248 ~~H~~~~~~~~~  259 (275)
                      ..|++.++....
T Consensus        82 ~~H~~~~~~~~~   93 (110)
T 2csh_A           82 HRHVTSCTKSYE   93 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHcccccc
Confidence            999988776554

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.78  E-value=1.5e-19  Score=119.78  Aligned_cols=85  Identities=33%  Similarity=0.656  Sum_probs=78.6

Q ss_pred             CCCCCCCC--CChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHH
Q psy12834        171 NDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLF  248 (275)
Q Consensus       171 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~  248 (275)
                      ++++|.|+  .|++.|.+...|..|++ .|.++++|.|+.|++.|.+...|..|+++|+++++|.|..|++.|...+.|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            36789998  69999999999999988 7888899999999999999999999999999999999999999999999999


Q ss_pred             hhhccccc
Q psy12834        249 NMIQPKRF  256 (275)
Q Consensus       249 ~H~~~~~~  256 (275)
                      .|++.|..
T Consensus        80 ~H~~~H~~   87 (90)
T 1a1h_A           80 RHTKIHLR   87 (90)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhcc
Confidence            99987653

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=2.2e-20  Score=129.82  Aligned_cols=104  Identities=11%  Similarity=0.078  Sum_probs=89.8

Q ss_pred             ccchHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhh-cCCCCC-cccccccccC--CChhHHHHHHHhhcCCCce
Q psy12834        157 QRSNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAA-HTGERP-YQCDICNATF--IYPEHFKKHRRIHTGEKPY  232 (275)
Q Consensus       157 ~~~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~-H~~~~~-~~C~~C~~~f--~~~~~l~~H~~~h~~~~~~  232 (275)
                      +.+.|..|++ .|.++++|.|..|++.|.+...|..|++.. |...++ +.|+.|++.|  .....|..|+++|+++++|
T Consensus         3 s~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCC-CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             cchhhhhhee-eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            3456778887 799999999999999999999999999840 545554 5599999999  8999999999999999999


Q ss_pred             eCcccchhhhhhhHHHhhhcccccccCCc
Q psy12834        233 VCEVRLAVFYYVTCLFNMIQPKRFRLGRP  261 (275)
Q Consensus       233 ~C~~C~~~~~~~~~~~~H~~~~~~~~~~~  261 (275)
                      .|.+|++.|...+.|..|++.++...+.+
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCcccCC
Confidence            99999999999999999998776554433

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=7.5e-19  Score=117.90  Aligned_cols=89  Identities=33%  Similarity=0.624  Sum_probs=55.6

Q ss_pred             cCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHH
Q psy12834          8 HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLE   87 (275)
Q Consensus         8 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~   87 (275)
                      +.++++|.|+.|++.|.+...|..|++.|.+ +++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCC-CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            4556666666666666666666666666654 445666666666666666666666666555666666666666666666


Q ss_pred             HHHHhhcCCC
Q psy12834         88 VHLAVHTGNR   97 (275)
Q Consensus        88 ~H~~~~~~~~   97 (275)
                      .|++.|+++.
T Consensus        82 ~H~~~h~~~~   91 (96)
T 2dmd_A           82 VHLRSHTGDS   91 (96)
T ss_dssp             HHHTTCCSCC
T ss_pred             HHHHHhcCCC
Confidence            6665555543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.1e-19  Score=118.96  Aligned_cols=82  Identities=30%  Similarity=0.586  Sum_probs=78.5

Q ss_pred             CCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCC--CceeCcccchhhhhhhHH
Q psy12834        170 FNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGE--KPYVCEVRLAVFYYVTCL  247 (275)
Q Consensus       170 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~~~~~~~~  247 (275)
                      .++++|.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.+...|..|++.|+++  ++|.|..|++.|...+.|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            56789999999999999999999988 788999999999999999999999999999997  899999999999999999


Q ss_pred             Hhhhc
Q psy12834        248 FNMIQ  252 (275)
Q Consensus       248 ~~H~~  252 (275)
                      ..|++
T Consensus        82 ~~H~~   86 (95)
T 2yt9_A           82 NGHIK   86 (95)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99996

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=1.4e-18  Score=118.76  Aligned_cols=88  Identities=39%  Similarity=0.753  Sum_probs=47.4

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHH
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHL   90 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   90 (275)
                      +++|.|+.|++.|.+...|..|++.|.+ +++|.|.+|++.|.....|..|++.|.++++|.|++|++.|.....|..|+
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTD-ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            4455555555555555555555555553 345555555555555555555555555555555555555555555555555


Q ss_pred             HhhcCCCCc
Q psy12834         91 AVHTGNRPF   99 (275)
Q Consensus        91 ~~~~~~~~~   99 (275)
                      +.|.++++|
T Consensus        94 ~~H~~~~~~  102 (106)
T 2ee8_A           94 TLHMQTSSP  102 (106)
T ss_dssp             HHTTSCCCC
T ss_pred             HHhCCCCCC
Confidence            555554444

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=1.2e-18  Score=119.07  Aligned_cols=91  Identities=31%  Similarity=0.661  Sum_probs=86.8

Q ss_pred             CCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHHHH
Q psy12834         39 RKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHE  118 (275)
Q Consensus        39 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  118 (275)
                      .+++|.|.+|++.|.....|..|++.|.+.++|.|++|++.|.....|..|+..|.++++|.|..|++.|.....|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCccc
Q psy12834        119 RTHTGEKPYQC  129 (275)
Q Consensus       119 ~~~~~~~~~~c  129 (275)
                      +.|.++++|..
T Consensus        94 ~~H~~~~~~~~  104 (106)
T 2ee8_A           94 TLHMQTSSPTA  104 (106)
T ss_dssp             HHTTSCCCCCC
T ss_pred             HHhCCCCCCcC
Confidence            99999988753

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=2.1e-19  Score=124.87  Aligned_cols=101  Identities=20%  Similarity=0.333  Sum_probs=83.2

Q ss_pred             ChhhhcccCCCCceecccccccccCHHHHHHHHHh--hcCCCCCcccccchhhc--ccchHHHHHHhhhcCCCccccCcc
Q psy12834          1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVT--HTDRKRPFSCEKCDKSF--YTQQNLVQHEKTHSGSKDFVCTEC   76 (275)
Q Consensus         1 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~~~~C~~C~~~f--~~~~~l~~H~~~~~~~~~~~C~~C   76 (275)
                      |..|.++|.++++|.|+.|++.|.+...|..|++.  +.+....+.|.+|++.|  .....|..|++.|.++++|.|++|
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            67889999999999999999999999999999998  65434345588898888  888888888888888888888888


Q ss_pred             hhhcCChHHHHHHHHhhcCCCCccC
Q psy12834         77 GKAFGTLRNLEVHLAVHTGNRPFIC  101 (275)
Q Consensus        77 ~~~f~~~~~l~~H~~~~~~~~~~~C  101 (275)
                      ++.|.....|..|++.++.......
T Consensus        87 ~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             CCccCCHHHHHHHHHHhCCcccCCC
Confidence            8888888888888888776655443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=9.1e-19  Score=119.96  Aligned_cols=95  Identities=20%  Similarity=0.349  Sum_probs=74.6

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCCh
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTL   83 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~   83 (275)
                      ++++|.++++|.|++|++.|.+...|..|++.|.   ++|.|.+|++.|.....|..|+. |.++++|.|++|++.|...
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH---HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC---CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            5677788888888888888888888888888874   47888888888888888888875 7777778888888888887


Q ss_pred             HHHHHHHH-hhcCCCCccCC
Q psy12834         84 RNLEVHLA-VHTGNRPFICR  102 (275)
Q Consensus        84 ~~l~~H~~-~~~~~~~~~C~  102 (275)
                      ..|..|++ .|.++++|.+.
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            78888875 77777777653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=2e-18  Score=114.38  Aligned_cols=84  Identities=32%  Similarity=0.765  Sum_probs=42.4

Q ss_pred             CCceecc--cccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHH
Q psy12834         11 ARPYECK--TCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEV   88 (275)
Q Consensus        11 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~   88 (275)
                      +++|.|+  .|++.|.+...|..|+++|.+ +++|.|..|++.|.+...|..|++.|.+.++|.|+.|++.|.....|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            3455554  355555555555555555543 3345555555555555555555555544444555555555555445555


Q ss_pred             HHHhhcC
Q psy12834         89 HLAVHTG   95 (275)
Q Consensus        89 H~~~~~~   95 (275)
                      |++.|++
T Consensus        81 H~~~H~~   87 (90)
T 1a1h_A           81 HTKIHLR   87 (90)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhcc
Confidence            5444444

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=2.2e-18  Score=112.02  Aligned_cols=81  Identities=38%  Similarity=0.793  Sum_probs=47.0

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHh
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAV   92 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   92 (275)
                      +|.|+.|++.|.+...|..|++.|.+ +++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT-CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC-CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            35566666666666666666665553 44556666665555555555555555555555555555555555555555555


Q ss_pred             hc
Q psy12834         93 HT   94 (275)
Q Consensus        93 ~~   94 (275)
                      |+
T Consensus        80 H~   81 (82)
T 2kmk_A           80 HT   81 (82)
T ss_dssp             HC
T ss_pred             hC
Confidence            43

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.74  E-value=4.1e-19  Score=117.15  Aligned_cols=86  Identities=30%  Similarity=0.537  Sum_probs=80.2

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhh
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMI  251 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~  251 (275)
                      ++||.|+.|++.|.....|..|++ .|.++++|.|+.|++.|.....|..|++.|++ .+|.|..|++.|.....|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            478999999999999999999988 68899999999999999999999999999985 7899999999999999999999


Q ss_pred             cccccccC
Q psy12834        252 QPKRFRLG  259 (275)
Q Consensus       252 ~~~~~~~~  259 (275)
                      +..+...|
T Consensus        79 ~~~h~~~~   86 (88)
T 1llm_C           79 ARLKKLVG   86 (88)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHhc
Confidence            88776655

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.5e-18  Score=118.82  Aligned_cols=81  Identities=17%  Similarity=0.275  Sum_probs=72.0

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHH
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCL  247 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~  247 (275)
                      .|.++++|.|+.|++.|.....|..|++. |  .++|.|+.|++.|.....|..|+. |.++++|.|.+|++.|.....|
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERL-C--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHH-H--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHH-C--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            57788899999999999999999999884 5  468999999999999999999985 9999999999999999999999


Q ss_pred             Hhhhc
Q psy12834        248 FNMIQ  252 (275)
Q Consensus       248 ~~H~~  252 (275)
                      ..|++
T Consensus        86 ~~H~~   90 (107)
T 1wjp_A           86 WRHQV   90 (107)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99996

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.73  E-value=4e-18  Score=112.62  Aligned_cols=83  Identities=29%  Similarity=0.622  Sum_probs=77.6

Q ss_pred             CCCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCcccc--cccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhH
Q psy12834        171 NDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTC  246 (275)
Q Consensus       171 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~  246 (275)
                      +..+|.|+.  |++.|.+...|..|++ .|.++++|.|+  .|++.|.+...|..|++.|+++++|.|..|++.|...+.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDH   80 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHH
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHH
Confidence            356799999  9999999999999988 78999999997  599999999999999999999999999999999999999


Q ss_pred             HHhhhccc
Q psy12834        247 LFNMIQPK  254 (275)
Q Consensus       247 ~~~H~~~~  254 (275)
                      |..|++.|
T Consensus        81 l~~H~~~H   88 (89)
T 2wbs_A           81 LALHMKRH   88 (89)
T ss_dssp             HHHHGGGG
T ss_pred             HHHHHHhh
Confidence            99999765

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.8e-17  Score=110.87  Aligned_cols=82  Identities=30%  Similarity=0.757  Sum_probs=50.8

Q ss_pred             CCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCC--CccccCcchhhcCChHHH
Q psy12834          9 TGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGS--KDFVCTECGKAFGTLRNL   86 (275)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--~~~~C~~C~~~f~~~~~l   86 (275)
                      +++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|++.|.....|..|++.|++.  ++|.|+.|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCS-SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            355666666666666666666666666553 44666666666666666666666666554  556666666666666666


Q ss_pred             HHHHH
Q psy12834         87 EVHLA   91 (275)
Q Consensus        87 ~~H~~   91 (275)
                      ..|++
T Consensus        82 ~~H~~   86 (95)
T 2yt9_A           82 NGHIK   86 (95)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.4e-17  Score=114.51  Aligned_cols=85  Identities=32%  Similarity=0.659  Sum_probs=55.8

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHH
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNL   86 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l   86 (275)
                      .|+++++|.| .|++.|.+...|..|++.|.+ +++|.|.+|++.|.....|..|++.|.+.++|.|+.|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCC-CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            4566677777 677777777777777776664 45666666666666666666666666666666666666666666666


Q ss_pred             HHHHHhh
Q psy12834         87 EVHLAVH   93 (275)
Q Consensus        87 ~~H~~~~   93 (275)
                      ..|++.+
T Consensus        82 ~~H~~~~   88 (110)
T 2csh_A           82 HRHVTSC   88 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHc
Confidence            6665554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=4.6e-18  Score=102.45  Aligned_cols=52  Identities=27%  Similarity=0.546  Sum_probs=27.2

Q ss_pred             CCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhc
Q psy12834        201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQ  252 (275)
Q Consensus       201 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~  252 (275)
                      ++||+|..|+++|.....|..|+++|++++||.|..||+.|...+.|..|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~   53 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK   53 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC
Confidence            3455555555555555555555555555555555555555555555555543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=1.3e-17  Score=112.73  Aligned_cols=86  Identities=29%  Similarity=0.579  Sum_probs=79.6

Q ss_pred             CCCCCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCcccc--cccccCCChhHHHHHHHhhcCCCceeCcccchhhhhh
Q psy12834        169 HFNDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYV  244 (275)
Q Consensus       169 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~  244 (275)
                      ....++|.|..  |++.|.+...|..|++ .|.++++|.|+  .|++.|.....|..|+++|+++++|.|..|++.|...
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   88 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRS   88 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSH
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCH
Confidence            34567899997  9999999999999998 78899999997  5999999999999999999999999999999999999


Q ss_pred             hHHHhhhcccc
Q psy12834        245 TCLFNMIQPKR  255 (275)
Q Consensus       245 ~~~~~H~~~~~  255 (275)
                      +.|..|++.|.
T Consensus        89 ~~l~~H~~~H~   99 (100)
T 2ebt_A           89 DHLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999998664

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=1e-17  Score=100.86  Aligned_cols=59  Identities=25%  Similarity=0.589  Sum_probs=55.9

Q ss_pred             CCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       171 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      .|+||.|.+||+.|...+.|..|++ .|++++||.|+.|+++|...+.|..|+++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRR-AHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHH-HhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            3789999999999999999999988 7999999999999999999999999999999985

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2e-17  Score=106.65  Aligned_cols=72  Identities=26%  Similarity=0.659  Sum_probs=68.1

Q ss_pred             CCCCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCccccc--ccccCCChhHHHHHHHhhcCCCceeCcccchhh
Q psy12834        170 FNDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVF  241 (275)
Q Consensus       170 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~  241 (275)
                      +++++|.|..  |++.|.+...|..|++..|.++++|.|+.  |++.|.....|..|+++|+++++|.|.+|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4678899987  99999999999999986799999999999  999999999999999999999999999999987

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=7.5e-17  Score=105.72  Aligned_cols=80  Identities=29%  Similarity=0.503  Sum_probs=72.6

Q ss_pred             HHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCC---CCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        161 LQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE---RPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       161 ~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      +..|++ .|.++++|.|..|++.|.....|..|++.+|...   ++|.|+.|++.|.....|..|+++|++++++.|..|
T Consensus         3 ~~~H~~-~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCST-TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             cccccc-eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            345676 7899999999999999999999999998777664   789999999999999999999999999999999999


Q ss_pred             chhh
Q psy12834        238 LAVF  241 (275)
Q Consensus       238 ~~~~  241 (275)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.65  E-value=7.1e-17  Score=105.55  Aligned_cols=78  Identities=32%  Similarity=0.628  Sum_probs=73.4

Q ss_pred             CCCC--CCChhhccChhhHHHHHHhhcCCCCCccccc--ccccCCChhHHHHHHHhhcCCCceeCcc---cchhhhhhhH
Q psy12834        174 RYPC--TSCPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCEV---RLAVFYYVTC  246 (275)
Q Consensus       174 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~~~~~~~  246 (275)
                      ||.|  +.|++.|.+...|..|++ .|.++++|+|+.  |++.|.+...|..|+++|++   |.|..   |++.|...+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5889  999999999999999987 788899999988  99999999999999999998   99999   9999999999


Q ss_pred             HHhhhcccc
Q psy12834        247 LFNMIQPKR  255 (275)
Q Consensus       247 ~~~H~~~~~  255 (275)
                      |..|++.|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999997654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=9.9e-17  Score=107.59  Aligned_cols=72  Identities=18%  Similarity=0.374  Sum_probs=66.2

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhc---CCCCCcccccccccCCChhHHHHH-HHhhcCCCceeCcccch
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAH---TGERPYQCDICNATFIYPEHFKKH-RRIHTGEKPYVCEVRLA  239 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  239 (275)
                      ...+++||.|..|++.|...+.|..|++..|   .+++||.|..|++.|.....|..| +++|++++||.|.++..
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            4578999999999999999999999998678   668999999999999999999999 89999999999998543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.64  E-value=4.4e-16  Score=105.06  Aligned_cols=82  Identities=34%  Similarity=0.726  Sum_probs=45.5

Q ss_pred             CCceeccc--ccccccCHHHHHHHHHhhcCCCCCcccc--cchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHH
Q psy12834         11 ARPYECKT--CKKTFVSKYTYKAHLVTHTDRKRPFSCE--KCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNL   86 (275)
Q Consensus        11 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l   86 (275)
                      .++|.|+.  |++.|.+...|..|++.|.+ +++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|.....|
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            34556654  66666666666666655553 3455554  3555555555555555555555555555555555555555


Q ss_pred             HHHHHhh
Q psy12834         87 EVHLAVH   93 (275)
Q Consensus        87 ~~H~~~~   93 (275)
                      ..|++.|
T Consensus        92 ~~H~~~H   98 (100)
T 2ebt_A           92 ALHMKRH   98 (100)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=3.7e-16  Score=103.06  Aligned_cols=80  Identities=34%  Similarity=0.761  Sum_probs=39.4

Q ss_pred             Cccccc--chhhcccchHHHHHHhhhcCCCccccC--cchhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHHH
Q psy12834         42 PFSCEK--CDKSFYTQQNLVQHEKTHSGSKDFVCT--ECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDH  117 (275)
Q Consensus        42 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  117 (275)
                      +|.|.+  |++.|.+...|..|++.|.+.++|.|+  .|++.|.....|..|+..|.++++|.|+.|++.|.....|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH   84 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHH
Confidence            344444  444444444444444444444444553  3555555555555555555555555555555555555555555


Q ss_pred             Hhhc
Q psy12834        118 ERTH  121 (275)
Q Consensus       118 ~~~~  121 (275)
                      ++.|
T Consensus        85 ~~~H   88 (89)
T 2wbs_A           85 MKRH   88 (89)
T ss_dssp             GGGG
T ss_pred             HHhh
Confidence            5443

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.5e-16  Score=101.95  Aligned_cols=80  Identities=28%  Similarity=0.557  Sum_probs=67.0

Q ss_pred             ChhhhcccCCCCceecccccccccCHHHHHHHHHhhcCCC---CCcccccchhhcccchHHHHHHhhhcCCCccccCcch
Q psy12834          1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRK---RPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECG   77 (275)
Q Consensus         1 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~---~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~   77 (275)
                      |.+|+++|.++++|.|+.|++.|.+...|..|++.++...   ++|.|.+|++.|.....|..|++.|++..++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            5678999999999999999999999999999998877643   6788888888888888888888888888888888877


Q ss_pred             hhc
Q psy12834         78 KAF   80 (275)
Q Consensus        78 ~~f   80 (275)
                      ..+
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.63  E-value=8.1e-17  Score=106.04  Aligned_cols=82  Identities=21%  Similarity=0.490  Sum_probs=64.2

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHH
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHL   90 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   90 (275)
                      +++|.|+.|++.|.+...|..|+++|.+ +++|.|..|++.|.....|..|++.+++ .+|.|+.|++.|.....|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            4678888888888888888888888775 5678888888888888888888887764 6678888888888877888887


Q ss_pred             Hhhc
Q psy12834         91 AVHT   94 (275)
Q Consensus        91 ~~~~   94 (275)
                      +.++
T Consensus        79 ~~~h   82 (88)
T 1llm_C           79 ARLK   82 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.6e-16  Score=99.66  Aligned_cols=66  Identities=39%  Similarity=0.809  Sum_probs=62.3

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      .+.++++|.|+.|++.|.....|..|++ .|.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHH-HcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4667899999999999999999999987 78899999999999999999999999999999999988

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=2.6e-15  Score=95.31  Aligned_cols=64  Identities=47%  Similarity=0.976  Sum_probs=58.9

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCce
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPY  232 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  232 (275)
                      .+.++++|.|..|++.|.....|..|++ .|.++++|+|+.|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHH-HHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHH-HcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5677889999999999999999999987 788899999999999999999999999999999886

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=3.2e-15  Score=97.53  Aligned_cols=77  Identities=34%  Similarity=0.655  Sum_probs=49.3

Q ss_pred             ceec--ccccccccCHHHHHHHHHhhcCCCCCccccc--chhhcccchHHHHHHhhhcCCCccccCc---chhhcCChHH
Q psy12834         13 PYEC--KTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK--CDKSFYTQQNLVQHEKTHSGSKDFVCTE---CGKAFGTLRN   85 (275)
Q Consensus        13 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~---C~~~f~~~~~   85 (275)
                      +|.|  +.|++.|.+...|..|+++|.+ +++|.|++  |++.|.....|..|++.|.+   |.|+.   |++.|.....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            4666  6666666666666666666664 45666666  66666666666666666655   66666   6666666666


Q ss_pred             HHHHHHhh
Q psy12834         86 LEVHLAVH   93 (275)
Q Consensus        86 l~~H~~~~   93 (275)
                      |..|++.+
T Consensus        77 l~~H~~~h   84 (85)
T 2j7j_A           77 YLKHVAEC   84 (85)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            66666554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=7.1e-15  Score=94.53  Aligned_cols=71  Identities=30%  Similarity=0.661  Sum_probs=45.2

Q ss_pred             CCCCceeccc--ccccccCHHHHHHHHH-hhcCCCCCccccc--chhhcccchHHHHHHhhhcCCCccccCcchhhc
Q psy12834          9 TGARPYECKT--CKKTFVSKYTYKAHLV-THTDRKRPFSCEK--CDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAF   80 (275)
Q Consensus         9 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f   80 (275)
                      +++++|.|+.  |++.|.+...|..|++ .|.+ +++|.|.+  |++.|.....|..|++.|.++++|.|++|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3456666665  7777777666766766 3443 55666666  666666666666666666666666666666655

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=5.3e-15  Score=95.65  Aligned_cols=62  Identities=19%  Similarity=0.453  Sum_probs=38.6

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHH-HhhcCCC
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHR-RIHTGEK  230 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  230 (275)
                      .+...++|.|++|++.|.+...|..|++ .|++++||.|+.|++.|.....|..|+ +.|.+|+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3445556666666666666666666665 456666666666666666666666665 3455543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.53  E-value=3.2e-16  Score=110.90  Aligned_cols=81  Identities=20%  Similarity=0.276  Sum_probs=69.3

Q ss_pred             CCCCCCCCCChhhcc------ChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhh
Q psy12834        171 NDKRYPCTSCPKAFK------RRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYV  244 (275)
Q Consensus       171 ~~~~~~C~~C~~~f~------~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~  244 (275)
                      .++.+.|..|+..|.      ....|..|+  .|.+++||.|+.|++.|.....|..|+++|  ++||.|..|++.|...
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~  113 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST  113 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCH
Confidence            345577888877776      566677775  477899999999999999999999999999  8899999999999999


Q ss_pred             hHHHhhhcccc
Q psy12834        245 TCLFNMIQPKR  255 (275)
Q Consensus       245 ~~~~~H~~~~~  255 (275)
                      +.|..|++.|+
T Consensus       114 ~~l~~H~~~h~  124 (129)
T 2wbt_A          114 DSALDHVCKKH  124 (129)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHHC
Confidence            99999998665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=2.4e-15  Score=106.41  Aligned_cols=114  Identities=17%  Similarity=0.226  Sum_probs=88.2

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcC--CCCCcccccchhhcc------cchHHHHHHhhhcCCCccccCcch
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD--RKRPFSCEKCDKSFY------TQQNLVQHEKTHSGSKDFVCTECG   77 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~--~~~~~~C~~C~~~f~------~~~~l~~H~~~~~~~~~~~C~~C~   77 (275)
                      .++++.++|.|...+.....  .+..+.+.+..  .++.+.|.+|...|.      ....|..|+ .|.++++|.|+.|+
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTC
T ss_pred             hhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCC
Confidence            46788999988876543321  22333222211  134688999887776      445566666 67889999999999


Q ss_pred             hhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHHHHhhccCC
Q psy12834         78 KAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE  124 (275)
Q Consensus        78 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  124 (275)
                      +.|.....|..|+..|  +++|.|..|++.|.....|..|++.|++.
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999999999998  88999999999999999999999999875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.2e-14  Score=91.21  Aligned_cols=62  Identities=21%  Similarity=0.515  Sum_probs=44.4

Q ss_pred             CCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCc
Q psy12834        169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP  231 (275)
Q Consensus       169 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  231 (275)
                      +.++++|.|..|++.|.....|..|++ .|.++++|+|+.|++.|.....|..|+++|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHG-GGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            556677777777777777777777766 46667777777777777777777777777777665

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=4.1e-15  Score=99.79  Aligned_cols=73  Identities=15%  Similarity=0.267  Sum_probs=51.0

Q ss_pred             chHHHHHhhcCCCCCCCCCCCChhhcc-ChhhHHHHHHhhcCC-CCCcccccccccCCChhHHHHHHHhhcCCCcee
Q psy12834        159 SNLQSHKRATHFNDKRYPCTSCPKAFK-RRRLLDYHIKAAHTG-ERPYQCDICNATFIYPEHFKKHRRIHTGEKPYV  233 (275)
Q Consensus       159 ~~~~~h~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~H~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  233 (275)
                      +.+..|++ .|.++++|.|..|++.|. ....|..|++ .|.+ +++|.|++|++.|.....|..|+++|++++|+.
T Consensus        10 ~~~~~h~~-~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           10 GPEEQWQR-AIHERGEAVCPTCNVVTRKTLVGLKKHME-VCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CSCSHHHH-TTTTTSCCCCTTTCCCCSSCSHHHHHHHH-HHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CcHHHHHH-HhccCCCcCCCCCCCChhhhHHHHHHHHH-HHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            44556665 677777777777777777 7777777776 3444 667777777777777777777777777776643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=8.3e-15  Score=91.88  Aligned_cols=62  Identities=16%  Similarity=0.291  Sum_probs=58.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhccccccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRL  258 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~~~~  258 (275)
                      .|+++++|+|+.|++.|.....|..|+++|+++++|.|.+|++.|...+.|..|++.|+...
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            57889999999999999999999999999999999999999999999999999998776543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.51  E-value=7.1e-15  Score=88.20  Aligned_cols=54  Identities=30%  Similarity=0.415  Sum_probs=31.5

Q ss_pred             CCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhccc
Q psy12834        201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       201 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~  254 (275)
                      +++|+|+.|++.|.+...|..|+++|+++++|.|..|++.|...+.|..|++.|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            345666666666666666666666666666666666666666666666666544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=2.9e-15  Score=100.58  Aligned_cols=73  Identities=14%  Similarity=0.063  Sum_probs=65.7

Q ss_pred             hccChhhHHHHHHhhcCCCCCcccccccccCC-ChhHHHHHHHhhcC-CCceeCcccchhhhhhhHHHhhhccccc
Q psy12834        183 AFKRRRLLDYHIKAAHTGERPYQCDICNATFI-YPEHFKKHRRIHTG-EKPYVCEVRLAVFYYVTCLFNMIQPKRF  256 (275)
Q Consensus       183 ~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~~~~~~~~~~H~~~~~~  256 (275)
                      .+.....+..|++ .|.++++|.|+.|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|++.|+.
T Consensus         5 s~~~~~~~~~h~~-~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            5 SSGPGGPEEQWQR-AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCSCSHHHH-TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCcHHHHHH-HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            3455566778877 899999999999999999 99999999999999 9999999999999999999999987664

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.9e-14  Score=91.13  Aligned_cols=68  Identities=28%  Similarity=0.577  Sum_probs=59.7

Q ss_pred             ChhhhcccCCCCceecccccccccCHHHHHHHHHh-hcCCCCCcccccchhhcccchHHHHHHhhhcCC
Q psy12834          1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVT-HTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGS   68 (275)
Q Consensus         1 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   68 (275)
                      |.+|+++|.++++|.|++|++.|.+...|..|++. |.+.+++|.|++|++.|.....|..|++.+++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            46799999999999999999999999999999985 554347899999999999999999999987654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.2e-14  Score=90.44  Aligned_cols=62  Identities=40%  Similarity=0.768  Sum_probs=42.0

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      .|.++++|.|+.|++.|.....|..|++ .|.++++|+|+.|++.|.....|..|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH-GGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHH-hcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4566667777777777777777777765 5666666777777777777777777776666553

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.3e-14  Score=91.65  Aligned_cols=66  Identities=30%  Similarity=0.694  Sum_probs=39.2

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCcccc
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVC   73 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C   73 (275)
                      .+.++++|.|++|++.|.+...|..|++.|.+ +++|.|.+|++.|.....|..|++.|.++++|.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC-SCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCC-CcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34455666666666666666666666665553 4456666666666666666666666655555554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=9.7e-15  Score=90.43  Aligned_cols=61  Identities=20%  Similarity=0.472  Sum_probs=39.5

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhc-CCCCCcccccccccCCChhHHHHHHHhhcC
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAH-TGERPYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      .|.++++|.|+.|++.|.+...|..|++..| .++++|.|+.|++.|.....|..|++.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3555666666666666666666666666445 466666666666666666666666666654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.2e-14  Score=92.92  Aligned_cols=64  Identities=25%  Similarity=0.508  Sum_probs=41.7

Q ss_pred             HHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCC-CCcccccccccCCChhHHHHHHHhhcC
Q psy12834        164 HKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE-RPYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       164 h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      |++ .|.++++|.|+.|++.|.....|..|++..|..+ ++|+|+.|++.|.....|..|++.+++
T Consensus         6 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            6 SGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCC-CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccc-ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            444 5666667777777777777777777765556553 667777777777777777777665443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.5e-14  Score=94.59  Aligned_cols=69  Identities=16%  Similarity=0.213  Sum_probs=37.6

Q ss_pred             chHHHHHhhcCCCCCCCCCCCChhhc-cChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHH-HHhhcCCC
Q psy12834        159 SNLQSHKRATHFNDKRYPCTSCPKAF-KRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKH-RRIHTGEK  230 (275)
Q Consensus       159 ~~~~~h~~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  230 (275)
                      +.+..|.. .+.++++|.|+.|++.| .+...|..|++ .| ++++|.|..|++.|.....|..| +++|+++.
T Consensus        20 ~~~~~~~~-~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           20 SLEEQWYL-EIVDKGSVSCPTCQAVGRKTIEGLKKHME-NC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CHHHHHHH-HHHHTSCEECTTTCSCEESSHHHHHHHHH-HH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             hHHHHHHH-HhcCCCCcCCCCCCCCcccCHHHHHHHHH-HH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            33444444 34455555566666666 55555555555 34 55555666666666555556555 55555443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.4e-14  Score=91.40  Aligned_cols=59  Identities=36%  Similarity=0.633  Sum_probs=56.3

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhcccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~  255 (275)
                      .|.++++|+|+.|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            68899999999999999999999999999999999999999999999999999997654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=3.5e-14  Score=91.76  Aligned_cols=60  Identities=18%  Similarity=0.306  Sum_probs=55.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhccccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRF  256 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~~  256 (275)
                      .+...++|.|++|++.|.....|..|+++|++++||.|.+|++.|...+.|..|++..|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            577788999999999999999999999999999999999999999999999999975543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.47  E-value=3e-14  Score=85.44  Aligned_cols=57  Identities=28%  Similarity=0.664  Sum_probs=50.2

Q ss_pred             CCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcC
Q psy12834        171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       171 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      ++++|.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLR-THTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHH-HcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            3678999999999999999999988 78899999999999999999999999999874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=6.4e-14  Score=83.95  Aligned_cols=56  Identities=34%  Similarity=0.715  Sum_probs=34.5

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      ||.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            4566666666666666666655 4555666666666666666666666666665543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.4e-14  Score=94.20  Aligned_cols=68  Identities=24%  Similarity=0.384  Sum_probs=43.2

Q ss_pred             CCCCceecccccccccCHHHHHHHHHh-hc--CCCCCcccccchhhcccchHHHHH-HhhhcCCCccccCcc
Q psy12834          9 TGARPYECKTCKKTFVSKYTYKAHLVT-HT--DRKRPFSCEKCDKSFYTQQNLVQH-EKTHSGSKDFVCTEC   76 (275)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~--~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~C~~C   76 (275)
                      .++++|.|+.|++.|.....|..|++. |.  .++++|.|.+|++.|...+.|..| ++.|.+++||.|.++
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            456667777777777777777777653 42  134566666666666666666666 566666666666653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.8e-14  Score=91.18  Aligned_cols=65  Identities=28%  Similarity=0.596  Sum_probs=43.6

Q ss_pred             HHHHHHhhcCCCCCcccc--cccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhccc
Q psy12834        190 LDYHIKAAHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       190 l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~  254 (275)
                      +..|+...|.++++|.|+  .|++.|.....|..|+++|.++++|.|..|++.|...+.|..|++.|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            344455566667777775  47777777777777777777777777777777777777777776543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.5e-14  Score=89.62  Aligned_cols=60  Identities=20%  Similarity=0.418  Sum_probs=55.7

Q ss_pred             hhcCCCCCcccccccccCCChhHHHHHHHh-h-cCCCceeCcccchhhhhhhHHHhhhcccc
Q psy12834        196 AAHTGERPYQCDICNATFIYPEHFKKHRRI-H-TGEKPYVCEVRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       196 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~~~~~~~~~~H~~~~~  255 (275)
                      ..|.++++|.|+.|++.|.+...|..|++. | .++++|.|..|++.|...+.|..|++.++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            368899999999999999999999999998 7 58999999999999999999999998765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=4.6e-14  Score=90.44  Aligned_cols=58  Identities=21%  Similarity=0.298  Sum_probs=41.6

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcC---CCceeCcccchhhhhhhHHHhhhcccc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTG---EKPYVCEVRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~~~~~~~~~~H~~~~~  255 (275)
                      |+++++|+|+.|++.|.....|..|+++|++   +++|.|.+|++.|...+.|..|++.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            5667777777777777777777777777764   677777777777777777777774433

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.5e-13  Score=91.49  Aligned_cols=73  Identities=21%  Similarity=0.283  Sum_probs=51.8

Q ss_pred             hcccchHHHHHHhhhcCCCccccCcchhhc-CChHHHHHHHHhhcCCCCccCCcccccccChhHHHHH-HhhccCC
Q psy12834         51 SFYTQQNLVQHEKTHSGSKDFVCTECGKAF-GTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDH-ERTHTGE  124 (275)
Q Consensus        51 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~  124 (275)
                      .|...+.+..|+..+.+.++|.|+.|++.| .....|..|++.| ++++|.|.+|++.|.....|..| ++.|.++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            455566667777777677777777777777 7777777777777 77777777777777777777777 6666543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=1.6e-13  Score=86.93  Aligned_cols=62  Identities=32%  Similarity=0.728  Sum_probs=35.6

Q ss_pred             cCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCc
Q psy12834          8 HTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKD   70 (275)
Q Consensus         8 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   70 (275)
                      +.++++|.|+.|++.|.+...|..|++.|.+ +++|.|.+|++.|.....|..|++.|.+++|
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTG-EKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-CCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCC-CCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            3445556666666666666666666655553 4455566565555555555555555555544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.44  E-value=1.8e-13  Score=91.20  Aligned_cols=65  Identities=26%  Similarity=0.381  Sum_probs=59.9

Q ss_pred             CCCCCCCCCChhhccChhhHHHHHHhhcCCCCC--------cccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERP--------YQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       171 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      +...|.|..|++.|.....|..|++..|.++++        |.|+.|++.|.....|..|+++|++++||.|.
T Consensus        22 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SCSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344578999999999999999999866988887        99999999999999999999999999999996

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=9e-14  Score=84.25  Aligned_cols=49  Identities=35%  Similarity=0.688  Sum_probs=32.9

Q ss_pred             CcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMI  251 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~  251 (275)
                      ||.|+.|++.|.....|..|+++|+++++|.|..|++.|...+.|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            5666666666666666666666666666666666666666666666665

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=3.6e-16  Score=99.04  Aligned_cols=70  Identities=19%  Similarity=0.349  Sum_probs=64.0

Q ss_pred             chHHHHHhhcCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        159 SNLQSHKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       159 ~~~~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      +.|..|++ .|.++++|.|..|++.|.....|..        +++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         4 ~~l~~H~~-~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCC-CCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHH-HhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            45677887 7999999999999999999888765        7889999999999999999999999999999999988

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.43  E-value=1.1e-13  Score=82.96  Aligned_cols=54  Identities=30%  Similarity=0.480  Sum_probs=51.1

Q ss_pred             CcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhccccc
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPKRF  256 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~~  256 (275)
                      ||.|+.|++.|.+...|..|+++|+++++|.|..|++.|...+.|..|++.|..
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            689999999999999999999999999999999999999999999999986643

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.4e-13  Score=81.13  Aligned_cols=56  Identities=36%  Similarity=0.894  Sum_probs=51.9

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHH-HhhcCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHR-RIHTGE  229 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  229 (275)
                      +||.|+.|++.|.....|..|++ .|.++++|.|+.|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47999999999999999999988 699999999999999999999999997 677765

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.6e-13  Score=86.64  Aligned_cols=67  Identities=34%  Similarity=0.692  Sum_probs=58.6

Q ss_pred             hHHHHHhhcCCCCCCCCCC--CChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhc
Q psy12834        160 NLQSHKRATHFNDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       160 ~~~~h~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      .+..+....+.++++|.|+  .|++.|.....|..|++ .|.++++|.|+.|++.|.....|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHH-hhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3445666678999999997  59999999999999987 7889999999999999999999999999874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.4e-13  Score=85.78  Aligned_cols=66  Identities=17%  Similarity=0.390  Sum_probs=57.1

Q ss_pred             CCCCCCCCCCCChhhccChhhHHHHHHhhcC--CCCCcccccccccCCChhHHHHHH-HhhcCCCceeC
Q psy12834        169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHT--GERPYQCDICNATFIYPEHFKKHR-RIHTGEKPYVC  234 (275)
Q Consensus       169 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~--~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C  234 (275)
                      |.++++|.|..|++.|.....|..|++.++.  .+++|.|+.|++.|.....|..|+ ..|.++.+...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            6789999999999999999999999984443  489999999999999999999999 56776666543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=7.8e-15  Score=92.76  Aligned_cols=68  Identities=25%  Similarity=0.406  Sum_probs=53.1

Q ss_pred             ChhhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCCccccCcc
Q psy12834          1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTEC   76 (275)
Q Consensus         1 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   76 (275)
                      |..|+++|.++++|.|+.|++.|.+...|..        +++|.|..|++.|...+.|..|++.|.++++|.|++|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            5678888888888888888888887776654        4577888888888877778778777777777777766

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=9.4e-13  Score=81.31  Aligned_cols=58  Identities=21%  Similarity=0.370  Sum_probs=37.1

Q ss_pred             CCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccc-cccccCCChhHHHHHHHhhcCCCc
Q psy12834        171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCD-ICNATFIYPEHFKKHRRIHTGEKP  231 (275)
Q Consensus       171 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  231 (275)
                      ++++|.|..|++.|. ...|..|+++  .+++||+|+ .|++.|.....|..|+++|..+.+
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~--~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ--CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH--CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH--cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            455666666666666 6666666653  566666666 666666666666666666655543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.26  E-value=2.1e-12  Score=73.53  Aligned_cols=44  Identities=32%  Similarity=0.573  Sum_probs=36.8

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGS-SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCC-CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.26  E-value=2.3e-12  Score=73.35  Aligned_cols=44  Identities=39%  Similarity=0.717  Sum_probs=37.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCC-ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            544 67888889999999999999999999988988888988877

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.3e-12  Score=73.32  Aligned_cols=44  Identities=34%  Similarity=0.579  Sum_probs=36.7

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             Ccc-cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.9e-12  Score=72.92  Aligned_cols=41  Identities=27%  Similarity=0.548  Sum_probs=36.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67888889999999999999999999888988888988877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.1e-12  Score=72.82  Aligned_cols=44  Identities=30%  Similarity=0.616  Sum_probs=37.4

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCC-CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            544 67888888999999999888899999888888888988877

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.24  E-value=2.3e-12  Score=73.37  Aligned_cols=44  Identities=25%  Similarity=0.518  Sum_probs=35.3

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGS-SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcC-ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            444 57778888888888888888888888888888888888876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.4e-12  Score=73.32  Aligned_cols=44  Identities=39%  Similarity=0.700  Sum_probs=36.9

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSS-CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCC-CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=73.33  Aligned_cols=44  Identities=39%  Similarity=0.719  Sum_probs=35.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGS-SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCc-CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            444 67778888888888888888888888888888888888876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=73.41  Aligned_cols=44  Identities=34%  Similarity=0.690  Sum_probs=37.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|+|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGS-SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccC-CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=73.47  Aligned_cols=44  Identities=34%  Similarity=0.566  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccc-ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            544 68888999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=73.03  Aligned_cols=41  Identities=34%  Similarity=0.663  Sum_probs=36.5

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68888889999999999999999999999999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=73.38  Aligned_cols=44  Identities=43%  Similarity=0.728  Sum_probs=37.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcC-CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=73.01  Aligned_cols=44  Identities=39%  Similarity=0.610  Sum_probs=35.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCC-CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.1e-12  Score=72.81  Aligned_cols=44  Identities=34%  Similarity=0.650  Sum_probs=36.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCC-CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=72.90  Aligned_cols=44  Identities=39%  Similarity=0.718  Sum_probs=36.4

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSC-CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCc-CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=73.36  Aligned_cols=44  Identities=34%  Similarity=0.583  Sum_probs=37.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGS-SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCC-CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=73.46  Aligned_cols=44  Identities=30%  Similarity=0.454  Sum_probs=38.3

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGS-SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCC-CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            554 68888899999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=72.91  Aligned_cols=41  Identities=27%  Similarity=0.530  Sum_probs=34.6

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67788888888888888888888888888888888888877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=72.95  Aligned_cols=44  Identities=34%  Similarity=0.616  Sum_probs=36.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|+|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGS-SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCC-SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             Ccc-ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2e-12  Score=73.64  Aligned_cols=44  Identities=30%  Similarity=0.538  Sum_probs=36.5

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGS-SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccc-ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=72.69  Aligned_cols=41  Identities=34%  Similarity=0.604  Sum_probs=34.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67888888888888888888888888888888888888877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=73.02  Aligned_cols=44  Identities=36%  Similarity=0.694  Sum_probs=37.4

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Ccc-ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67888888999999999888899999888888888988877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=73.39  Aligned_cols=44  Identities=39%  Similarity=0.680  Sum_probs=36.4

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGS-SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccc-CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=2.8e-12  Score=73.02  Aligned_cols=44  Identities=34%  Similarity=0.625  Sum_probs=37.3

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCS-SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             Ccc-CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 67888888888898888888888889888888888888877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.6e-12  Score=73.16  Aligned_cols=44  Identities=39%  Similarity=0.714  Sum_probs=37.7

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             Ccc-cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            444 68888889999999999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.5e-12  Score=73.24  Aligned_cols=44  Identities=41%  Similarity=0.708  Sum_probs=38.3

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCC-CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            544 68888899999999999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=73.39  Aligned_cols=44  Identities=39%  Similarity=0.676  Sum_probs=36.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGS-SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCc-CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=72.71  Aligned_cols=44  Identities=39%  Similarity=0.704  Sum_probs=37.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCC-CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.23  E-value=7e-12  Score=78.76  Aligned_cols=54  Identities=31%  Similarity=0.503  Sum_probs=30.5

Q ss_pred             CCCCCccccc--ccccCCChhHHHHHHHhhcCCCceeCcc--cchhhhhhhHHHhhhc
Q psy12834        199 TGERPYQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCEV--RLAVFYYVTCLFNMIQ  252 (275)
Q Consensus       199 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~~~~~~~~~~H~~  252 (275)
                      ...++|.|+.  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|++
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            3444555555  5555555555555555555555555543  6666655555555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.4e-12  Score=73.30  Aligned_cols=44  Identities=32%  Similarity=0.545  Sum_probs=36.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGS-SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcC-CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.4e-12  Score=72.62  Aligned_cols=44  Identities=34%  Similarity=0.591  Sum_probs=37.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSC-TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ccc-CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            544 67888888888888888888888888888888888888876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=72.58  Aligned_cols=44  Identities=39%  Similarity=0.720  Sum_probs=36.7

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGS-SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSS-CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCC-CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=3.9e-12  Score=75.07  Aligned_cols=45  Identities=31%  Similarity=0.680  Sum_probs=22.8

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHH-hhcCCCceeCcccchhhh
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRR-IHTGEKPYVCEVRLAVFY  242 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~~~  242 (275)
                      |.++++|.|+.|++.|.....|..|++ +|.++++|.|.+|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            344445555555555555555555543 455555555555555543

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.22  E-value=2.4e-12  Score=73.31  Aligned_cols=44  Identities=34%  Similarity=0.541  Sum_probs=35.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccc-CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 57778888888888888888888888888888888888776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.9e-12  Score=72.92  Aligned_cols=41  Identities=39%  Similarity=0.745  Sum_probs=34.5

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888888888888888888888888888888888876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.8e-12  Score=72.43  Aligned_cols=44  Identities=20%  Similarity=0.297  Sum_probs=37.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGS-SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSC-CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccc-ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.2e-12  Score=72.77  Aligned_cols=44  Identities=25%  Similarity=0.468  Sum_probs=36.4

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGS-SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             Ccc-cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888877

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.1e-12  Score=78.97  Aligned_cols=56  Identities=16%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc-ccchhhhhhhHHHhhhcccc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE-VRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~~~~~~~~~~H~~~~~  255 (275)
                      .-+.+||+|+.|++.|. ...|..|+++ .+++||.|. .|++.|...+.|..|++.|.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            45678999999999999 9999999999 999999999 99999999999999997654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.8e-12  Score=72.43  Aligned_cols=41  Identities=32%  Similarity=0.660  Sum_probs=35.1

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67888888888888888888888888888888888888877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=73.27  Aligned_cols=44  Identities=39%  Similarity=0.740  Sum_probs=37.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCc-CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 68888889999999999999999999989999999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.21  E-value=3.3e-12  Score=72.69  Aligned_cols=44  Identities=36%  Similarity=0.709  Sum_probs=35.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGS-SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCC-SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCC-CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.1e-12  Score=72.78  Aligned_cols=44  Identities=30%  Similarity=0.510  Sum_probs=36.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGS-SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccc-cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.5e-12  Score=72.57  Aligned_cols=44  Identities=32%  Similarity=0.675  Sum_probs=36.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STT-CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             ccc-CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            544 67888888888888888888888888888888888888876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.3e-12  Score=72.67  Aligned_cols=44  Identities=36%  Similarity=0.625  Sum_probs=37.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGS-SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCC-ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888877

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.21  E-value=4.7e-12  Score=72.03  Aligned_cols=41  Identities=32%  Similarity=0.561  Sum_probs=35.4

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|+|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67888888888888888888888888888888888888877

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.20  E-value=2.7e-11  Score=80.42  Aligned_cols=60  Identities=32%  Similarity=0.501  Sum_probs=33.3

Q ss_pred             cccccchhhcccchHHHHHHhh-hcCCCc--------cccCcchhhcCChHHHHHHHHhhcCCCCccCC
Q psy12834         43 FSCEKCDKSFYTQQNLVQHEKT-HSGSKD--------FVCTECGKAFGTLRNLEVHLAVHTGNRPFICR  102 (275)
Q Consensus        43 ~~C~~C~~~f~~~~~l~~H~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  102 (275)
                      +.|..|++.|.....|..|++. |.+.++        |.|+.|++.|.....|..|++.|.++++|.|.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3444444444444444444444 333333        56666666666666666666666666666664

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.1e-12  Score=72.84  Aligned_cols=44  Identities=30%  Similarity=0.609  Sum_probs=36.3

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGS-SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCc-CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888877

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=9.2e-12  Score=70.44  Aligned_cols=42  Identities=26%  Similarity=0.519  Sum_probs=36.5

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRL  238 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  238 (275)
                      .|+++++|+|+.|++.|.....|..|+++|+++++|.|..||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578888888888888888888888888888888888888886

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.6e-12  Score=72.10  Aligned_cols=41  Identities=32%  Similarity=0.563  Sum_probs=36.5

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67888889999999999999999999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.5e-12  Score=73.21  Aligned_cols=44  Identities=34%  Similarity=0.672  Sum_probs=35.9

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|+++++|+|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCC-CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67788888888888888888888888888888888888877

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=1.6e-11  Score=72.34  Aligned_cols=48  Identities=38%  Similarity=0.576  Sum_probs=44.8

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCC
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIY  215 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~  215 (275)
                      .+.++++|.|+.|++.|.....|..|++..|.++++|+|+.|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            467889999999999999999999998768999999999999999976

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.6e-12  Score=71.76  Aligned_cols=44  Identities=36%  Similarity=0.613  Sum_probs=36.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHH-hhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRR-IHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|++ +|++++||.|.+|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGS-SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCC-CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccc-ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            444 6778888888888888888888888888 8888888888877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.4e-12  Score=71.78  Aligned_cols=44  Identities=36%  Similarity=0.640  Sum_probs=36.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGS-SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCC-CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 67888888888888888888888888888888888888865

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=9.8e-12  Score=71.39  Aligned_cols=43  Identities=28%  Similarity=0.571  Sum_probs=31.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccch
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLA  239 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  239 (275)
                      .|..+++|.|+.|++.|.....|..|+++|+++++|.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3566677777777777777777777777777777777777764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9e-12  Score=70.85  Aligned_cols=44  Identities=36%  Similarity=0.637  Sum_probs=37.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGS-SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCC-CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 68888889999999999999999999888988888988875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=69.81  Aligned_cols=41  Identities=34%  Similarity=0.563  Sum_probs=35.3

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57788888888888888888888888888888888888877

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=68.16  Aligned_cols=39  Identities=28%  Similarity=0.609  Sum_probs=34.1

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888899999999999999999999889888888885

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=68.76  Aligned_cols=41  Identities=46%  Similarity=0.909  Sum_probs=33.1

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|+|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57777888888888888888888888888888888888776

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.2e-11  Score=68.02  Aligned_cols=46  Identities=26%  Similarity=0.415  Sum_probs=40.7

Q ss_pred             hhhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          2 EDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         2 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      ++|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR-EKSSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS-TTSSCCSCC
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            3688899999999999999999999999999999885 678999877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.2e-11  Score=67.58  Aligned_cols=45  Identities=31%  Similarity=0.567  Sum_probs=40.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG-KKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS-CCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC-CCCCCCCCC
Confidence            578899999999999999999999999999999885 678999887

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.12  E-value=2e-11  Score=67.89  Aligned_cols=39  Identities=31%  Similarity=0.672  Sum_probs=34.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      .|+++++|+|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678888899999999999889999998889888888885

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.8e-11  Score=67.39  Aligned_cols=45  Identities=29%  Similarity=0.473  Sum_probs=39.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC-CCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            578889999999999999999999999999999885 678999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.11  E-value=4.2e-11  Score=75.15  Aligned_cols=58  Identities=29%  Similarity=0.693  Sum_probs=52.8

Q ss_pred             cCCCCCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCccccc--ccccCCChhHHHHHHHhh
Q psy12834        168 THFNDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       168 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  226 (275)
                      .....++|.|..  |++.|.....|..|++ .|.++++|+|++  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHH-HHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHH-hcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            456778999988  9999999999999987 799999999975  999999999999998876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.7e-11  Score=67.43  Aligned_cols=45  Identities=31%  Similarity=0.524  Sum_probs=40.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC-CSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            588899999999999999999999999999999885 678999877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.11  E-value=6.4e-11  Score=67.20  Aligned_cols=45  Identities=33%  Similarity=0.537  Sum_probs=39.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS-CCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578899999999999999999999999999999885 678999877

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.11  E-value=1e-12  Score=80.01  Aligned_cols=54  Identities=13%  Similarity=0.220  Sum_probs=39.1

Q ss_pred             HHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHh
Q psy12834        192 YHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFN  249 (275)
Q Consensus       192 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~  249 (275)
                      .|++ .|.+++||.|+.|++.|.....|.   ++|+++++|.|..|++.|...+++..
T Consensus         4 ~h~~-~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            4 TDER-DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCSS-SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hHHH-HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            3544 577777788888888887777665   67777888888888888777665543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.1e-11  Score=67.29  Aligned_cols=45  Identities=33%  Similarity=0.570  Sum_probs=39.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS-CCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            588899999999999999999999999999998885 678999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.8e-11  Score=67.09  Aligned_cols=45  Identities=31%  Similarity=0.489  Sum_probs=39.5

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG-ERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC-CSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            578889999999999999999999999999988885 678999877

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.3e-11  Score=67.22  Aligned_cols=45  Identities=27%  Similarity=0.406  Sum_probs=39.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS-SSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCC-CCCCCCCCC
Confidence            578889999999999999999999999999988875 678999877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.11  E-value=5.6e-11  Score=67.46  Aligned_cols=45  Identities=33%  Similarity=0.502  Sum_probs=40.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS-CCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            588899999999999999999999999999999885 678999877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=7e-11  Score=67.06  Aligned_cols=45  Identities=29%  Similarity=0.487  Sum_probs=40.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG-YRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC-CCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC-CCCCCCCCC
Confidence            588899999999999999999999999999999885 678999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.4e-11  Score=67.22  Aligned_cols=45  Identities=29%  Similarity=0.498  Sum_probs=39.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC-CCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCC-CCCCCCCCC
Confidence            478889999999999999999999999999998885 678999877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=7.3e-11  Score=66.97  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=39.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC-CSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            578889999999999999999999999999988875 678999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.7e-11  Score=67.13  Aligned_cols=45  Identities=36%  Similarity=0.608  Sum_probs=40.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT-SCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578899999999999999999999999999999885 678999877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.6e-11  Score=67.17  Aligned_cols=45  Identities=27%  Similarity=0.550  Sum_probs=39.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|++|++.|.+...|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC-CCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578889999999999999999999999999988875 678999877

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3e-11  Score=68.62  Aligned_cols=43  Identities=42%  Similarity=0.752  Sum_probs=35.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCc-CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            444 6788888888888888888888888888888888888864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.5e-11  Score=68.94  Aligned_cols=43  Identities=40%  Similarity=0.607  Sum_probs=36.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGS-SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCC-CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             Ccc-ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            444 6788888899999999988889999988888888888863

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.10  E-value=6.8e-11  Score=67.09  Aligned_cols=45  Identities=27%  Similarity=0.453  Sum_probs=39.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC-CCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            578889999999999999999999999999998885 678999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.2e-11  Score=67.26  Aligned_cols=45  Identities=31%  Similarity=0.514  Sum_probs=39.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC-SSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            588899999999999999999999999999999885 678999877

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.10  E-value=2.6e-11  Score=68.90  Aligned_cols=43  Identities=37%  Similarity=0.706  Sum_probs=35.7

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGS-SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCC-CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444 6788888888888888888888888888888888888864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=68.74  Aligned_cols=43  Identities=37%  Similarity=0.763  Sum_probs=36.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCC-CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            544 6888888999999999999999999999999999998864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3e-11  Score=68.60  Aligned_cols=43  Identities=33%  Similarity=0.592  Sum_probs=34.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGS-SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCC-CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCC-CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444 6778888888888888888888888888888888888863

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=6.5e-11  Score=67.19  Aligned_cols=45  Identities=18%  Similarity=0.397  Sum_probs=39.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS-SSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC-CCCcCCCCC
Confidence            478889999999999999999999999999988875 678999877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=7e-11  Score=67.03  Aligned_cols=45  Identities=29%  Similarity=0.496  Sum_probs=39.1

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSC-CCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578888999999999999999999999999988885 678998877

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=68.26  Aligned_cols=43  Identities=40%  Similarity=0.726  Sum_probs=35.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCC-CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccc-CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444 6778888888888888888888888888888888888864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=68.77  Aligned_cols=43  Identities=33%  Similarity=0.599  Sum_probs=35.7

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGS-SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccC-CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            444 6788888888888888888888888888888888888864

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=6.4e-11  Score=67.21  Aligned_cols=45  Identities=20%  Similarity=0.342  Sum_probs=39.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|++|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSC-SCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            578889999999999999999999999999988875 678999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.4e-11  Score=67.21  Aligned_cols=45  Identities=29%  Similarity=0.489  Sum_probs=39.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCC-CCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCC-CCCCCCCCC
Confidence            578889999999999999999999999999998875 678999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.6e-11  Score=66.67  Aligned_cols=45  Identities=29%  Similarity=0.483  Sum_probs=39.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK-QKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC-CCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            588889999999999999999999999999998885 678999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.8e-11  Score=67.09  Aligned_cols=45  Identities=31%  Similarity=0.492  Sum_probs=39.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSC-SSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            478889999999999999999999999999999885 678999877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=7.3e-11  Score=66.96  Aligned_cols=45  Identities=27%  Similarity=0.520  Sum_probs=40.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS-SSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC-CCCCCCCCC
Confidence            578899999999999999999999999999999885 678999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=8.7e-11  Score=65.94  Aligned_cols=44  Identities=27%  Similarity=0.536  Sum_probs=38.1

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      |+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE-EKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTS-SCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            56788889999999999999999999999998875 678998876

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=68.49  Aligned_cols=43  Identities=42%  Similarity=0.762  Sum_probs=34.4

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCc-CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            444 6778888888888888888888888888888888888863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=68.15  Aligned_cols=40  Identities=35%  Similarity=0.688  Sum_probs=34.1

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      .|.++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6788888888888888888888888888888888888864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.4e-11  Score=68.37  Aligned_cols=43  Identities=37%  Similarity=0.711  Sum_probs=33.8

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccc-ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444 6777888888888888888888888888888888888863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.6e-11  Score=68.30  Aligned_cols=43  Identities=37%  Similarity=0.726  Sum_probs=35.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCS-CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             Ccc-ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444 6778888888888888888888888888888888888864

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.5e-11  Score=67.16  Aligned_cols=45  Identities=29%  Similarity=0.403  Sum_probs=39.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD-DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS-CCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            578889999999999999999999999999988875 678988877

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.1e-11  Score=68.55  Aligned_cols=43  Identities=42%  Similarity=0.783  Sum_probs=36.8

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSS-SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCc-CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            544 6888889999999999999999999999999999998864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.9e-11  Score=68.71  Aligned_cols=43  Identities=40%  Similarity=0.629  Sum_probs=34.8

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGS-SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             ccc-CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444 6778888888888888888888888888888888888863

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.1e-11  Score=66.78  Aligned_cols=45  Identities=29%  Similarity=0.524  Sum_probs=39.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC-CCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            478889999999999999999999999999988875 678999877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.9e-11  Score=67.07  Aligned_cols=45  Identities=29%  Similarity=0.510  Sum_probs=39.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT-CSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            578889999999999999999999999999988875 678998877

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.3e-11  Score=66.72  Aligned_cols=45  Identities=36%  Similarity=0.568  Sum_probs=40.1

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS-CCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC-CCCCCCCCC
Confidence            578899999999999999999999999999999885 678999887

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.4e-11  Score=68.37  Aligned_cols=43  Identities=40%  Similarity=0.663  Sum_probs=35.5

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|+.
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGS-SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCc-ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            444 6788888888888888888888888888888888888863

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.08  E-value=9.2e-11  Score=66.54  Aligned_cols=45  Identities=29%  Similarity=0.476  Sum_probs=40.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTS-CCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            578899999999999999999999999999998885 678999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.5e-11  Score=66.67  Aligned_cols=45  Identities=29%  Similarity=0.431  Sum_probs=39.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG-ENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT-SCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578889999999999999999999999999988875 678998877

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.7e-11  Score=66.45  Aligned_cols=45  Identities=18%  Similarity=0.363  Sum_probs=39.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG-EKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS-CCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            477889999999999999999999999999998885 678999877

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.7e-11  Score=68.20  Aligned_cols=43  Identities=37%  Similarity=0.661  Sum_probs=33.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             ccc-ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444 5777888888888888888888888888888888888863

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.9e-11  Score=66.40  Aligned_cols=45  Identities=24%  Similarity=0.516  Sum_probs=39.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSC-CCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578899999999999999999999999999998875 678999887

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.4e-11  Score=68.37  Aligned_cols=43  Identities=35%  Similarity=0.620  Sum_probs=35.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGS-SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCC-CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444 6778888888888888888888888888888888888864

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.1e-10  Score=66.22  Aligned_cols=45  Identities=29%  Similarity=0.574  Sum_probs=39.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTT-CCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            478889999999999999999999999999998875 678999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=9.2e-11  Score=66.54  Aligned_cols=45  Identities=18%  Similarity=0.266  Sum_probs=39.8

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG-EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC-SCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            578899999999999999999999999999998885 678999877

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.08  E-value=1.1e-10  Score=66.16  Aligned_cols=45  Identities=29%  Similarity=0.524  Sum_probs=39.5

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|++|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR-EKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            477889999999999999999999999999998885 678999877

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.5e-11  Score=68.35  Aligned_cols=40  Identities=35%  Similarity=0.832  Sum_probs=32.3

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      .|.++++|+|+.|++.|.....|..|+++|+++++|.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5777888888888888888888888888888888888863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.8e-11  Score=67.46  Aligned_cols=42  Identities=21%  Similarity=0.467  Sum_probs=34.9

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.+++||.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGS-SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSC-CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             Ccc-ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            444 678888888888888888888888888888888888884

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=67.98  Aligned_cols=42  Identities=38%  Similarity=0.770  Sum_probs=33.5

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGS-SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCS-CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             ccc-CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444 577788888888888888888888888888888888886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.9e-11  Score=67.70  Aligned_cols=42  Identities=36%  Similarity=0.744  Sum_probs=33.7

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGS-SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCC-SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCC-CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 677788888888888888888888888888888888885

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.4e-11  Score=67.16  Aligned_cols=42  Identities=33%  Similarity=0.612  Sum_probs=35.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSS-CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             Ccc-CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            444 678888888888888888888888888888888888884

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=66.10  Aligned_cols=45  Identities=31%  Similarity=0.533  Sum_probs=38.8

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|++|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC-SCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            477888999999999999999999999999988875 678988877

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.7e-11  Score=68.22  Aligned_cols=43  Identities=40%  Similarity=0.726  Sum_probs=34.9

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             Ccc-CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444 6778888888888888888888888888888888888863

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=66.19  Aligned_cols=45  Identities=27%  Similarity=0.493  Sum_probs=38.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT-CCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            477888889999999999999999999999988875 678888876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.1e-11  Score=67.02  Aligned_cols=45  Identities=29%  Similarity=0.498  Sum_probs=39.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG-GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS-CCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            478888899999999999999999999999988885 678988877

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.7e-11  Score=67.07  Aligned_cols=42  Identities=31%  Similarity=0.494  Sum_probs=33.8

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGS-SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCC-CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCc-CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            444 577888888888888888888888888888888888874

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.07  E-value=8.9e-11  Score=66.60  Aligned_cols=45  Identities=27%  Similarity=0.488  Sum_probs=37.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC-CSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            477888888888888888888888888888888775 678888876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=66.26  Aligned_cols=45  Identities=31%  Similarity=0.509  Sum_probs=38.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG-QRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS-CCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            477888889999999999999999999999988885 678888877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.7e-11  Score=66.43  Aligned_cols=45  Identities=33%  Similarity=0.598  Sum_probs=39.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG-ERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCS-CCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCC-CCCCCCCCC
Confidence            478889999999999999999999999999998885 678999887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.1e-11  Score=68.06  Aligned_cols=43  Identities=30%  Similarity=0.539  Sum_probs=36.9

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|++
T Consensus         3 h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGS-SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCS-CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCc-CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444 6888889999999999999999999999999999999873

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.5e-10  Score=65.68  Aligned_cols=45  Identities=16%  Similarity=0.265  Sum_probs=39.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG-QKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC-CSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            478889999999999999999999999999999885 678999877

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.8e-11  Score=68.17  Aligned_cols=43  Identities=47%  Similarity=0.838  Sum_probs=33.9

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGS-SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSC-CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCC-CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            444 5777888888888888888888888888888888888864

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.8e-11  Score=67.40  Aligned_cols=45  Identities=24%  Similarity=0.493  Sum_probs=39.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSS-CCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578889999999999999999999999999988885 678999877

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.2e-11  Score=67.28  Aligned_cols=42  Identities=26%  Similarity=0.544  Sum_probs=34.3

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGS-SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCC-SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             Ccc-ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444 678888888888888888888888888888888888884

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.6e-10  Score=65.57  Aligned_cols=45  Identities=22%  Similarity=0.490  Sum_probs=39.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|++|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCC-SSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            477889999999999999999999999999998875 678999877

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.5e-11  Score=67.86  Aligned_cols=42  Identities=33%  Similarity=0.700  Sum_probs=35.5

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCC-CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccc-cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            544 678888888888888888888888888888888888886

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.3e-10  Score=65.93  Aligned_cols=45  Identities=29%  Similarity=0.516  Sum_probs=39.5

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT-SCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            578899999999999999999999999999998885 678998865

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.4e-10  Score=65.72  Aligned_cols=45  Identities=22%  Similarity=0.407  Sum_probs=39.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG-EKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC-CCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            367888999999999999999999999999999885 678999877

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.8e-11  Score=67.75  Aligned_cols=42  Identities=31%  Similarity=0.559  Sum_probs=34.9

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|+|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCC-CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccc-ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            544 678888888888888888888888888888888888886

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.04  E-value=2.6e-11  Score=71.45  Aligned_cols=51  Identities=24%  Similarity=0.327  Sum_probs=42.5

Q ss_pred             hhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCcee
Q psy12834        182 KAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYV  233 (275)
Q Consensus       182 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  233 (275)
                      +.|.....|..|++ .|.++++|.|+.|++.|.....|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRS-RSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHH-HHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHH-hcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            45677777788876 7888888999999999999999999999999888873

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=1.8e-10  Score=64.33  Aligned_cols=40  Identities=18%  Similarity=0.375  Sum_probs=33.2

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      .|+++++|+|+.|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4777888888888888888888888888888888888863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.04  E-value=6.1e-11  Score=65.86  Aligned_cols=38  Identities=26%  Similarity=0.531  Sum_probs=32.7

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      .|.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67788888888888888888888888888888888887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4.7e-11  Score=67.78  Aligned_cols=43  Identities=26%  Similarity=0.413  Sum_probs=34.2

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcC-CCceeCcc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTG-EKPYVCEV  236 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  236 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++ +++|.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGS-SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCC-CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             Ccc-ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 57778888888888888888888888888888 88888864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=66.66  Aligned_cols=38  Identities=37%  Similarity=0.740  Sum_probs=31.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      .|.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            57778888888888888888888888888888888877

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4.9e-11  Score=66.27  Aligned_cols=38  Identities=42%  Similarity=0.830  Sum_probs=30.7

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      .|.++++|+|+.|++.|.....|..|+++|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            57777888888888888888888888888888888776

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.7e-10  Score=65.43  Aligned_cols=40  Identities=43%  Similarity=0.713  Sum_probs=33.4

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      .|.++++|+|+.|++.|.....|..|+++|++++||.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            5777888888888888888888888888888888888863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=5.3e-11  Score=66.87  Aligned_cols=42  Identities=21%  Similarity=0.445  Sum_probs=32.8

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGS-SGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCS-CCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             ccc-ccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            444 577778888888888888888888888888888888774

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1e-10  Score=65.65  Aligned_cols=39  Identities=18%  Similarity=0.383  Sum_probs=33.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            577888888888888888888888888888888888884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.6e-11  Score=66.37  Aligned_cols=38  Identities=39%  Similarity=0.850  Sum_probs=33.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      .|+++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67888888888888888888888888888888888887

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7e-11  Score=67.03  Aligned_cols=42  Identities=36%  Similarity=0.689  Sum_probs=34.6

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCC-SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             ccc-CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 677888888888888888888888888888888888886

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.8e-11  Score=67.47  Aligned_cols=42  Identities=24%  Similarity=0.462  Sum_probs=36.1

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGS-SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCC-CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCc-CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 688888999999999999999999999999999999885

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.4e-11  Score=66.72  Aligned_cols=39  Identities=41%  Similarity=0.893  Sum_probs=31.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      .|.++++|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            577777888888888888888888888888888888775

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.2e-10  Score=65.26  Aligned_cols=45  Identities=31%  Similarity=0.533  Sum_probs=39.1

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHH-hhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLV-THTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.....|..|++ +|.+ +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence            57888999999999999999999999999998 7775 678999877

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3e-10  Score=64.39  Aligned_cols=45  Identities=29%  Similarity=0.558  Sum_probs=39.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC-CCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            478889999999999999999999999999999885 678998765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=65.33  Aligned_cols=42  Identities=29%  Similarity=0.605  Sum_probs=35.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGS-SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCC-CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCc-ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            444 678888888888888888888888888888888888874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.6e-10  Score=63.79  Aligned_cols=38  Identities=34%  Similarity=0.689  Sum_probs=31.1

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      .|.++++|+|+.|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            57778888888888888888888888888888888877

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.7e-11  Score=67.14  Aligned_cols=42  Identities=31%  Similarity=0.531  Sum_probs=35.7

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      |++ .|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGS-SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCC-CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccc-ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 678888899999999999999999999889888888885

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=65.25  Aligned_cols=41  Identities=34%  Similarity=0.658  Sum_probs=32.8

Q ss_pred             hcCCCCCcccc--cccccCCChhHHHHHHHhhcCCCceeCccc
Q psy12834        197 AHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCEVR  237 (275)
Q Consensus       197 ~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  237 (275)
                      .|.++++|+|.  .|++.|.....|..|+++|++++||.|.+|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777788887  788888888888888888888888888776

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=64.67  Aligned_cols=39  Identities=36%  Similarity=0.731  Sum_probs=31.5

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCE  235 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  235 (275)
                      .|.++++|+|+.|++.|.....|..|+++|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            577778888888888888888888888888888888876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.97  E-value=7.5e-11  Score=71.60  Aligned_cols=54  Identities=17%  Similarity=0.383  Sum_probs=46.2

Q ss_pred             ChhhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHH
Q psy12834          1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNL   58 (275)
Q Consensus         1 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l   58 (275)
                      |+.|+++|.++++|.|+.|++.|.....|.   +.|.+ +++|.|.+|++.|...+++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCccccCccc
Confidence            678999999999999999999999888776   66664 7799999999999877654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.3e-10  Score=63.68  Aligned_cols=44  Identities=30%  Similarity=0.523  Sum_probs=38.1

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      ++++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSS-SCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            56788889999999999999999999999988875 678998877

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.97  E-value=5.3e-10  Score=63.32  Aligned_cols=44  Identities=30%  Similarity=0.525  Sum_probs=38.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT-SCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578889999999999999999999999999999885 67888864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=3.4e-10  Score=63.79  Aligned_cols=42  Identities=26%  Similarity=0.554  Sum_probs=39.6

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCccccccc
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICN  210 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  210 (275)
                      .|.++++|.|..|++.|.....|..|++ .|.++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHH-HHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHH-HccCCCCCCCcCCC
Confidence            6889999999999999999999999988 79999999999996

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=3.3e-10  Score=64.86  Aligned_cols=43  Identities=28%  Similarity=0.536  Sum_probs=39.9

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccc
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNA  211 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  211 (275)
                      .+.++++|.|.+|++.|.....|..|++ .|.+++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGG-GSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHH-hcCCCCCccCCCCCC
Confidence            4678899999999999999999999987 799999999999985

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.1e-10  Score=63.06  Aligned_cols=44  Identities=36%  Similarity=0.591  Sum_probs=38.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG-EKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS-SSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            578899999999999999999999999999999885 67898864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=7.3e-10  Score=62.70  Aligned_cols=44  Identities=39%  Similarity=0.637  Sum_probs=38.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC-CCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578889999999999999999999999999999885 67888864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.4e-10  Score=62.67  Aligned_cols=44  Identities=30%  Similarity=0.596  Sum_probs=38.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC-CSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC-CCCCCCCC
Confidence            578889999999999999999999999999998885 67888864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.94  E-value=8.2e-10  Score=61.15  Aligned_cols=42  Identities=31%  Similarity=0.489  Sum_probs=35.6

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      |+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAG-ESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCC-CCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCC-CCCCCCC
Confidence            56788888999999999999999999999988885 6788874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.5e-10  Score=62.94  Aligned_cols=44  Identities=36%  Similarity=0.532  Sum_probs=38.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC-CCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578889999999999999999999999999998875 67888864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.3e-10  Score=62.03  Aligned_cols=43  Identities=37%  Similarity=0.566  Sum_probs=37.8

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG-ESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT-SSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC-CCCCCCC
Confidence            588899999999999999999999999999999885 6788884

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.7e-10  Score=62.88  Aligned_cols=44  Identities=30%  Similarity=0.517  Sum_probs=37.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT-SSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC-CCCCCCCC
Confidence            478888889999999999999999999999888875 67888864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.3e-10  Score=62.69  Aligned_cols=44  Identities=34%  Similarity=0.604  Sum_probs=37.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG-ENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS-SCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578889999999999999999999999999988875 67888864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7.7e-10  Score=62.59  Aligned_cols=44  Identities=30%  Similarity=0.586  Sum_probs=38.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS-CCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            578889999999999999999999999999999885 67888864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=8.5e-10  Score=62.45  Aligned_cols=44  Identities=25%  Similarity=0.544  Sum_probs=38.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT-CCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            578889999999999999999999999999998875 67888864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7.9e-10  Score=62.56  Aligned_cols=44  Identities=32%  Similarity=0.493  Sum_probs=37.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG-ERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC-CCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578888899999999999999999999999988875 67888864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=8.6e-10  Score=62.41  Aligned_cols=44  Identities=32%  Similarity=0.508  Sum_probs=38.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ-ETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS-CCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578889999999999999999999999999999885 67888863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=8e-10  Score=62.55  Aligned_cols=44  Identities=30%  Similarity=0.548  Sum_probs=38.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC-CCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            578889999999999999999999999999988875 67888864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=9.6e-10  Score=62.21  Aligned_cols=44  Identities=34%  Similarity=0.554  Sum_probs=38.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS-CCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC-CCCCCCCC
Confidence            578899999999999999999999999999998885 67888863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=8.7e-10  Score=62.37  Aligned_cols=44  Identities=32%  Similarity=0.569  Sum_probs=38.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS-CCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC-CCCcCCCC
Confidence            578889999999999999999999999999998875 67888864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=8.7e-10  Score=62.38  Aligned_cols=44  Identities=34%  Similarity=0.591  Sum_probs=37.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS-SSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            478888999999999999999999999999988875 67888864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.8e-10  Score=62.59  Aligned_cols=44  Identities=30%  Similarity=0.527  Sum_probs=37.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC-SCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC-CCCCCCCC
Confidence            477888889999999999999999999999888875 67888863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1e-09  Score=62.13  Aligned_cols=44  Identities=27%  Similarity=0.498  Sum_probs=37.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS-SCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            478889999999999999999999999999998885 67888864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1e-09  Score=62.07  Aligned_cols=43  Identities=33%  Similarity=0.537  Sum_probs=38.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG-ERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC-CCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCC-CCCCCCC
Confidence            578889999999999999999999999999999885 6788886

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=9.2e-10  Score=62.30  Aligned_cols=44  Identities=25%  Similarity=0.450  Sum_probs=37.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS-SCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            578888899999999999999999999999888875 67888864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1e-09  Score=62.12  Aligned_cols=44  Identities=32%  Similarity=0.555  Sum_probs=38.1

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS-CCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            578889999999999999999999999999998875 67888863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=9e-10  Score=62.33  Aligned_cols=44  Identities=32%  Similarity=0.596  Sum_probs=37.5

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC-SCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578888899999999999999999999999988875 67888863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.6e-10  Score=62.92  Aligned_cols=44  Identities=32%  Similarity=0.648  Sum_probs=35.9

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      .+++|.++++|.|++|++.|.+...|..|+++|.+ +++|.|.+|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR-EKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH-CCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35678888888888888888888888888888875 668888876

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.7e-10  Score=62.40  Aligned_cols=44  Identities=30%  Similarity=0.533  Sum_probs=37.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|++|++.|.+...|..|+++|.+ +++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG-ERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS-CCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC-CCCCCCCC
Confidence            478889999999999999999999999999988875 67888864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.2e-09  Score=61.78  Aligned_cols=44  Identities=34%  Similarity=0.574  Sum_probs=37.2

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG-ERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS-CCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            477888889999999999999999999999988875 67888863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.2e-09  Score=61.16  Aligned_cols=43  Identities=28%  Similarity=0.350  Sum_probs=38.0

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA-KSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC-CCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCC
Confidence            588899999999999999999999999999998885 6788884

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.1e-09  Score=61.34  Aligned_cols=43  Identities=26%  Similarity=0.445  Sum_probs=36.8

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR-KSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC-CCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC-CCCCCCC
Confidence            578889999999999999999999999999988875 6788874

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=9.5e-10  Score=62.22  Aligned_cols=45  Identities=20%  Similarity=0.276  Sum_probs=36.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+.+++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888899999999999988889889888774256888863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1e-09  Score=61.36  Aligned_cols=43  Identities=37%  Similarity=0.476  Sum_probs=36.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG-ESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC-SSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC-CCCCCCC
Confidence            578888899999999999999999999999988875 6788874

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.6e-09  Score=59.93  Aligned_cols=41  Identities=32%  Similarity=0.512  Sum_probs=33.8

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC   45 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C   45 (275)
                      |+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV-KSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC-CSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            56778888888888888888888888888888775 667877

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.6e-10  Score=61.05  Aligned_cols=42  Identities=33%  Similarity=0.565  Sum_probs=35.5

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC   45 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C   45 (275)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC-CSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCC-CCCCCC
Confidence            477888889999999999999999999999988875 667776

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.3e-09  Score=60.99  Aligned_cols=43  Identities=35%  Similarity=0.482  Sum_probs=36.9

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG-QSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS-SCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            478889999999999999999999999999988875 6688874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.4e-09  Score=61.51  Aligned_cols=44  Identities=34%  Similarity=0.620  Sum_probs=37.7

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG-KKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC-CCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578889999999999999999999999999988875 67888863

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=61.78  Aligned_cols=44  Identities=25%  Similarity=0.487  Sum_probs=37.6

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +|+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR-EKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH-TTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            578889999999999999999999999999998885 67888863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.86  E-value=2.1e-09  Score=59.39  Aligned_cols=41  Identities=27%  Similarity=0.456  Sum_probs=34.9

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC   45 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C   45 (275)
                      |+++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ-SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC-CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC-CCCCCC
Confidence            56788888999999999999999999999988875 667876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.6e-09  Score=61.27  Aligned_cols=43  Identities=30%  Similarity=0.607  Sum_probs=36.4

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+ +++|.|+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC-SCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467888888999999999999999999999888875 6788885

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.7e-09  Score=59.83  Aligned_cols=41  Identities=37%  Similarity=0.646  Sum_probs=35.8

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC   45 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C   45 (275)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS-CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC-CCCCCC
Confidence            67888999999999999999999999999998885 668876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=61.94  Aligned_cols=43  Identities=28%  Similarity=0.491  Sum_probs=36.5

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      +|+++|.++++|.|++|++.|.....|..|+++|.+ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER-TDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH-SCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            578888888999999999999999999999988875 6688885

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.8e-09  Score=59.68  Aligned_cols=41  Identities=37%  Similarity=0.568  Sum_probs=34.0

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC   45 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C   45 (275)
                      |.++|.++++|.|+.|++.|.+...|..|+++|.+ +++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG-SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC-CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC-CCCCCC
Confidence            56788888889999999889888888888888875 667776

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.84  E-value=1.5e-09  Score=59.04  Aligned_cols=37  Identities=19%  Similarity=0.459  Sum_probs=29.2

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCceeC
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVC  234 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  234 (275)
                      |+++++|.|+.|++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4567788888888888888888888888888887765

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.5e-10  Score=71.96  Aligned_cols=61  Identities=16%  Similarity=0.104  Sum_probs=45.1

Q ss_pred             hHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhcc
Q psy12834        189 LLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQP  253 (275)
Q Consensus       189 ~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~  253 (275)
                      .|..|++ .|.+.+++.|+.|++.| ....|..|+ .|.++++|.|..|++.|. ..+|..|++.
T Consensus         4 ~L~~H~~-~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            4 GSSGHEE-TECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCSCCCC-CCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             HHHhhCc-ccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            3445643 57777888888888888 477888887 778888888888888765 5778888754

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=4.1e-09  Score=58.89  Aligned_cols=42  Identities=21%  Similarity=0.240  Sum_probs=34.5

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      |.++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAG-ESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT-SCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCC-CCCCCCC
Confidence            56778888888888888888888888888888875 6678774

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=60.40  Aligned_cols=43  Identities=28%  Similarity=0.435  Sum_probs=36.1

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCE   46 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~   46 (275)
                      +|+++|.++++|.|++|++.|.....|..|+++|.+ +++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR-KSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC-CCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            577888888999999999999999999999888875 6678773

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4.8e-09  Score=59.81  Aligned_cols=44  Identities=23%  Similarity=0.393  Sum_probs=37.6

Q ss_pred             hhcccCCCCceecc--cccccccCHHHHHHHHHhhcCCCCCcccccc
Q psy12834          4 HLVSHTGARPYECK--TCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC   48 (275)
Q Consensus         4 ~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C   48 (275)
                      |.++|.++++|.|.  .|++.|.....|..|+++|.+ +++|.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG-VKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC-CCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            56788889999997  899999999999999988875 678888876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=5e-09  Score=58.55  Aligned_cols=42  Identities=33%  Similarity=0.494  Sum_probs=36.3

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccc
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC   45 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C   45 (275)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+ +++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG-VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS-CSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC-CCCCCC
Confidence            478889999999999999999999999999998875 667765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.78  E-value=1e-09  Score=64.51  Aligned_cols=47  Identities=17%  Similarity=0.241  Sum_probs=21.4

Q ss_pred             cccchHHHHHHhhhcCCCccccCcchhhcCChHHHHHHHHhhcCCCC
Q psy12834         52 FYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTGNRP   98 (275)
Q Consensus        52 f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   98 (275)
                      |.....|..|++.|.++++|.|+.|++.|.....|..|+..|.++++
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             cCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            33344444444444444444444444444444444444444444443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=5.4e-09  Score=62.98  Aligned_cols=38  Identities=26%  Similarity=0.527  Sum_probs=21.4

Q ss_pred             cCCCCCccccc--ccccCCChhHHHHHH-HhhcCCCceeCc
Q psy12834        198 HTGERPYQCDI--CNATFIYPEHFKKHR-RIHTGEKPYVCE  235 (275)
Q Consensus       198 H~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~  235 (275)
                      .++++||+|+.  |+++|+..+.|..|+ ++|++++||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            45555566543  666666666666664 355666655554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=5.8e-09  Score=58.89  Aligned_cols=43  Identities=26%  Similarity=0.403  Sum_probs=35.0

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      ++++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS-CCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCC-CCCCCCCC
Confidence            45678888888898898888888888888888875 67888853

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.78  E-value=7.1e-09  Score=57.59  Aligned_cols=41  Identities=15%  Similarity=0.346  Sum_probs=32.1

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      ++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHS-DKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC-TTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCC-CCCccCCC
Confidence            467778888888888888888888888888775 66787753

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.8e-09  Score=67.96  Aligned_cols=65  Identities=17%  Similarity=0.289  Sum_probs=54.4

Q ss_pred             ChhhhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhcccchHHHHHHhhhcCCC
Q psy12834          1 MEDHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK   69 (275)
Q Consensus         1 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   69 (275)
                      |..|++++.+.+++.|+.|+..|. ...|..|+ .+-+ ++++.|+.|++.|. ...|..|+..+.+.+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~-~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCG-ARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHH-HCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcC-CCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            567888899999999999999994 88999999 6664 67899999998877 588999998876543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5e-09  Score=58.85  Aligned_cols=43  Identities=30%  Similarity=0.492  Sum_probs=35.3

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccccc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEK   47 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~   47 (275)
                      +..+|.++++|.|+.|++.|.....|..|+++|.+ +++|.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG-EKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS-CCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCC-CCCCCCCC
Confidence            45678888899999999999999999999888875 67888863

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.74  E-value=7.7e-09  Score=53.81  Aligned_cols=32  Identities=22%  Similarity=0.431  Sum_probs=27.3

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCCCcee
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGEKPYV  233 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  233 (275)
                      +||.|+.|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46888888888888888888888888888875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=1.1e-08  Score=56.11  Aligned_cols=39  Identities=36%  Similarity=0.578  Sum_probs=32.2

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcCCCCCccc
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSC   45 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C   45 (275)
                      ++|.++++|.|+.|++.|.....|..|+++|.+ +++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTG-SGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCC-CSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCC-CCCcCC
Confidence            467788889999999999988888889888875 667776

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.69  E-value=1.1e-08  Score=53.83  Aligned_cols=34  Identities=24%  Similarity=0.544  Sum_probs=25.9

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP  231 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  231 (275)
                      |.++++|.|+.|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5667778888888888888888888877777653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.3e-08  Score=54.42  Aligned_cols=35  Identities=23%  Similarity=0.507  Sum_probs=27.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP  231 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  231 (275)
                      .|.++++|.|+.|++.|.....|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            57777888888888888888888888888887764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.67  E-value=1.5e-08  Score=53.40  Aligned_cols=34  Identities=29%  Similarity=0.720  Sum_probs=24.8

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKP  231 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  231 (275)
                      |.++++|.|+.|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5667777777777777777777777777776653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.64  E-value=1.3e-08  Score=54.40  Aligned_cols=33  Identities=33%  Similarity=0.692  Sum_probs=22.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      .|.+++||+|+.|++.|.....|..|+++|+++
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            466667777777777777777777777776653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.9e-08  Score=53.22  Aligned_cols=33  Identities=15%  Similarity=0.298  Sum_probs=26.1

Q ss_pred             hcCCCCCccccc--ccccCCChhHHHHHHHhhcCC
Q psy12834        197 AHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       197 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      .+.+++||+|+.  |+++|.....|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            466778888875  888888888888888888775

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=4e-08  Score=59.18  Aligned_cols=41  Identities=24%  Similarity=0.342  Sum_probs=37.0

Q ss_pred             cCCCCCCCCCCC--ChhhccChhhHHHHHHhhcCCCCCccccc
Q psy12834        168 THFNDKRYPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDI  208 (275)
Q Consensus       168 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  208 (275)
                      ..++++||.|..  |+++|...+.|..|++..|++++||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            467899999975  99999999999999866899999999965

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=1.2e-08  Score=66.25  Aligned_cols=53  Identities=17%  Similarity=0.251  Sum_probs=40.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhcc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQP  253 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~  253 (275)
                      .|.++++|+|+.|++.|.....|..|+++|++++||.|..|.    ....+..|.+.
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~   71 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKY   71 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcc
Confidence            477888888888888888888888888888888888887655    34455555543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=3e-08  Score=53.25  Aligned_cols=35  Identities=20%  Similarity=0.575  Sum_probs=29.0

Q ss_pred             cCCCCCcccc--cccccCCChhHHHHHHHhhcCCCce
Q psy12834        198 HTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEKPY  232 (275)
Q Consensus       198 H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  232 (275)
                      |+++++|+|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5677888888  4888888888888888888888876

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=5.1e-08  Score=51.59  Aligned_cols=34  Identities=24%  Similarity=0.555  Sum_probs=26.2

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      .|.++++|.|+.|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4667778888888888888888888888877653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.1e-08  Score=51.98  Aligned_cols=33  Identities=30%  Similarity=0.633  Sum_probs=24.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      .|.++++|+|+.|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            466777777777777777777777777777765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=6.1e-08  Score=51.32  Aligned_cols=33  Identities=21%  Similarity=0.552  Sum_probs=23.6

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      .|.+++||+|+.|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            366677777777777777777777777777665

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=6e-08  Score=51.34  Aligned_cols=33  Identities=30%  Similarity=0.728  Sum_probs=25.1

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      .|.++++|+|+.|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            456677788888888888888888888777765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=5.4e-08  Score=51.54  Aligned_cols=32  Identities=22%  Similarity=0.456  Sum_probs=22.1

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      |.++++|+|+.|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            55666777777777777777777777776654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=5.4e-08  Score=51.90  Aligned_cols=34  Identities=24%  Similarity=0.540  Sum_probs=26.3

Q ss_pred             hcCCCCCcccccccccCCCh-hHHHHHHHhhcCCC
Q psy12834        197 AHTGERPYQCDICNATFIYP-EHFKKHRRIHTGEK  230 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  230 (275)
                      .|.++++|+|+.|++.|... ..|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46777788888888888887 88888888877653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.51  E-value=8.5e-08  Score=51.07  Aligned_cols=35  Identities=23%  Similarity=0.512  Sum_probs=30.4

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      |.++|.++++|.|+.|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            67788889999999999999999999999888764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.50  E-value=4.7e-08  Score=51.58  Aligned_cols=25  Identities=20%  Similarity=0.499  Sum_probs=16.9

Q ss_pred             CCCCCcccccccccCCChhHHHHHH
Q psy12834        199 TGERPYQCDICNATFIYPEHFKKHR  223 (275)
Q Consensus       199 ~~~~~~~C~~C~~~f~~~~~l~~H~  223 (275)
                      .+++||+|+.|+++|+..+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566677777777777777776665

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.50  E-value=7.2e-08  Score=52.10  Aligned_cols=38  Identities=21%  Similarity=0.501  Sum_probs=33.5

Q ss_pred             CCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccc
Q psy12834        169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCD  207 (275)
Q Consensus       169 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  207 (275)
                      |.++++|.|..|++.|...+.|..|++ .|.++++|.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMN-VHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHH-TTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHH-HcCCCccceec
Confidence            457889999999999999999999987 79999998763

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=3.7e-09  Score=68.68  Aligned_cols=56  Identities=14%  Similarity=0.344  Sum_probs=48.3

Q ss_pred             cCCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhhcC
Q psy12834        168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       168 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      .|.++++|.|+.|++.|.....|..|++ .|.+++||+|..|.    ....|..|.+.|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHH-HHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            6889999999999999999999999987 79999999998765    45666677777766

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=2.1e-07  Score=49.46  Aligned_cols=33  Identities=30%  Similarity=0.613  Sum_probs=28.1

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      ++|.++++|.|+.|++.|.....|..|+++|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            567888889999999999988888888888875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.40  E-value=1.3e-07  Score=53.72  Aligned_cols=33  Identities=27%  Similarity=0.628  Sum_probs=21.8

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHH-hhcCCC
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRR-IHTGEK  230 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  230 (275)
                      |+++++|.|..|++.|.....|..|++ +|+++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            566677777777777777777777776 666654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.4e-07  Score=50.30  Aligned_cols=32  Identities=22%  Similarity=0.463  Sum_probs=20.2

Q ss_pred             hcCCCCCcccccccccCCChhHHHHH-HHhhcC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKH-RRIHTG  228 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  228 (275)
                      .|.+++||+|+.|++.|.....|..| ++.|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            35566666666666666666666666 566654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.37  E-value=2.3e-07  Score=49.38  Aligned_cols=33  Identities=30%  Similarity=0.616  Sum_probs=25.3

Q ss_pred             cCCCCCccccc--ccccCCChhHHHHHHHhhcCCC
Q psy12834        198 HTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       198 H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      |+++++|.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            66777888874  8888888888888888887653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.35  E-value=1.2e-08  Score=52.65  Aligned_cols=30  Identities=17%  Similarity=0.394  Sum_probs=15.4

Q ss_pred             CcccccccccCCChhHHHHHHHhhcCCCce
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTGEKPY  232 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  232 (275)
                      ||+|+.|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455555555555555555555555555443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.35  E-value=3.9e-07  Score=45.32  Aligned_cols=28  Identities=43%  Similarity=0.943  Sum_probs=21.1

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3577777877787777777777777765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=2.9e-07  Score=46.15  Aligned_cols=28  Identities=36%  Similarity=0.809  Sum_probs=20.2

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777777777777777777777665

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.33  E-value=2.8e-07  Score=45.87  Aligned_cols=28  Identities=21%  Similarity=0.585  Sum_probs=20.8

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3677777777777777777777777765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.32  E-value=4e-07  Score=47.07  Aligned_cols=32  Identities=31%  Similarity=0.570  Sum_probs=29.3

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCcc
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQ  205 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  205 (275)
                      +||.|..|++.|.....|..|++ .|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHIT-LHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHH-HHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHH-HhCCCCCCC
Confidence            47999999999999999999987 799998875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.32  E-value=3.7e-07  Score=47.73  Aligned_cols=34  Identities=26%  Similarity=0.426  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCCChhhccChhhHHHHHHhhcCCCCC
Q psy12834        169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERP  203 (275)
Q Consensus       169 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  203 (275)
                      |.++++|.|..|++.|.....|..|++ .|.+++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIR-EVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHH-HTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHH-HHcCCCC
Confidence            678899999999999999999999988 6776653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=5.9e-07  Score=54.46  Aligned_cols=40  Identities=13%  Similarity=0.210  Sum_probs=27.6

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRL  238 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  238 (275)
                      +..++||+|..|++.|.....|..|+++|+++. ..+..++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            566777777777777777777777777777764 3344443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.30  E-value=5.4e-07  Score=45.12  Aligned_cols=29  Identities=21%  Similarity=0.511  Sum_probs=21.5

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      ++|.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35777777777777777777777777664

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=4.8e-07  Score=44.91  Aligned_cols=29  Identities=24%  Similarity=0.545  Sum_probs=22.2

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46778888888888888888888777653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=4.7e-07  Score=48.12  Aligned_cols=33  Identities=24%  Similarity=0.521  Sum_probs=28.1

Q ss_pred             cccCCCCceecccccccccCHHHHHHH-HHhhcC
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAH-LVTHTD   38 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~   38 (275)
                      ++|.++++|.|+.|++.|.....|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            568888999999999999999999999 777764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=8.2e-07  Score=47.43  Aligned_cols=32  Identities=34%  Similarity=0.547  Sum_probs=26.1

Q ss_pred             ccCCCCceeccc--ccccccCHHHHHHHHHhhcC
Q psy12834          7 SHTGARPYECKT--CKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         7 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~   38 (275)
                      ++.+++||.|+.  |++.|.....|..|+++|.+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            456788888876  88888888888888888875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=3.9e-07  Score=45.29  Aligned_cols=29  Identities=41%  Similarity=0.858  Sum_probs=22.3

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            36788888888888888888888877653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.28  E-value=7.2e-07  Score=45.56  Aligned_cols=28  Identities=32%  Similarity=0.865  Sum_probs=21.1

Q ss_pred             CCcccc--cccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCD--ICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567777  6777777777777777777765

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.27  E-value=6.2e-07  Score=46.89  Aligned_cols=33  Identities=39%  Similarity=0.844  Sum_probs=21.1

Q ss_pred             hcCCCCccCCcccccccChhHHHHHHhhccCCC
Q psy12834         93 HTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK  125 (275)
Q Consensus        93 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  125 (275)
                      |.++++|.|..|++.|.....|..|++.|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445666666666666666666666666666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.25  E-value=4.8e-07  Score=47.61  Aligned_cols=26  Identities=27%  Similarity=0.414  Sum_probs=19.0

Q ss_pred             cCCCCceecccccccccCHHHHHHHH
Q psy12834          8 HTGARPYECKTCKKTFVSKYTYKAHL   33 (275)
Q Consensus         8 ~~~~~~~~C~~C~~~f~~~~~l~~H~   33 (275)
                      +.++++|.|+.|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677777777777777777777776

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.25  E-value=7e-07  Score=45.26  Aligned_cols=28  Identities=39%  Similarity=1.003  Sum_probs=20.6

Q ss_pred             CCcccc--cccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCD--ICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            367776  7777777777777777777765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=5.1e-07  Score=44.52  Aligned_cols=26  Identities=38%  Similarity=0.977  Sum_probs=15.8

Q ss_pred             CCcccccccccCCChhHHHHHHHhhc
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      ++|.|+.|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666665554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=1.2e-06  Score=46.05  Aligned_cols=33  Identities=30%  Similarity=0.577  Sum_probs=27.6

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      .+|.++++|.|+.|++.|.....|..|+++|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            357788889999999999988889888888774

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=1.2e-06  Score=46.09  Aligned_cols=33  Identities=30%  Similarity=0.602  Sum_probs=27.4

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      .+|.++++|.|+.|++.|.....|..|+++|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            357788889999999999888888888888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=6e-07  Score=43.86  Aligned_cols=25  Identities=28%  Similarity=0.627  Sum_probs=14.6

Q ss_pred             CCcccccccccCCChhHHHHHHHhh
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4555666666666666666665554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=46.82  Aligned_cols=27  Identities=41%  Similarity=0.778  Sum_probs=17.3

Q ss_pred             CcccccccccCCChhHHHHHHHhhcCC
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      ||+|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            566666666666666666666666554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.21  E-value=7e-07  Score=43.53  Aligned_cols=26  Identities=27%  Similarity=0.908  Sum_probs=16.9

Q ss_pred             CcccccccccCCChhHHHHHHHhhcC
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      ||+|+.|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            36666677777666666666666654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=4.8e-07  Score=44.30  Aligned_cols=25  Identities=32%  Similarity=0.646  Sum_probs=14.0

Q ss_pred             CCcccccccccCCChhHHHHHHHhh
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      +||+|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=1.1e-06  Score=46.62  Aligned_cols=33  Identities=21%  Similarity=0.459  Sum_probs=26.8

Q ss_pred             cccCCCCceecccccccccCH-HHHHHHHHhhcC
Q psy12834          6 VSHTGARPYECKTCKKTFVSK-YTYKAHLVTHTD   38 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~~~~   38 (275)
                      ++|.++++|.|+.|++.|... ..|..|+++|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            467788888888888888888 888888888764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=1.3e-06  Score=45.91  Aligned_cols=32  Identities=25%  Similarity=0.645  Sum_probs=26.6

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +|.++++|.|+.|++.|.....|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            56778888888888888888888888888764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2e-07  Score=46.82  Aligned_cols=28  Identities=46%  Similarity=0.960  Sum_probs=17.6

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=2e-06  Score=45.23  Aligned_cols=32  Identities=34%  Similarity=0.642  Sum_probs=26.6

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      ++.++++|.|+.|++.|.....|..|+++|.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            46678888888888888888888888888774

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=2.1e-06  Score=45.03  Aligned_cols=32  Identities=38%  Similarity=0.544  Sum_probs=26.2

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +|.++++|.|+.|++.|.....|..|+++|.+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            56778888888888888888888888888764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=6.6e-07  Score=50.46  Aligned_cols=34  Identities=18%  Similarity=0.447  Sum_probs=24.8

Q ss_pred             hcCCCCCcccc--cccccCCChhHHHHHHHhhcCCC
Q psy12834        197 AHTGERPYQCD--ICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       197 ~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      .|.+++||+|+  .|++.|...+.|..|+++|++++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            46777777774  57777777777777777777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.12  E-value=1.6e-06  Score=49.04  Aligned_cols=34  Identities=21%  Similarity=0.556  Sum_probs=27.1

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHH-hhcCCC
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLV-THTDRK   40 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~   40 (275)
                      +|.++++|.|.+|++.|.....|..|++ .|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4778889999999999999999999998 777643

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=1.2e-06  Score=46.75  Aligned_cols=35  Identities=26%  Similarity=0.477  Sum_probs=30.9

Q ss_pred             CCCCCCCCCC--CChhhccChhhHHHHHHhhcCCCCCc
Q psy12834        169 HFNDKRYPCT--SCPKAFKRRRLLDYHIKAAHTGERPY  204 (275)
Q Consensus       169 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~  204 (275)
                      |.++++|.|.  .|++.|.....|..|++ .|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHH-HHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHH-HhCCCCCC
Confidence            4678999999  59999999999999987 78888776

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=1.4e-06  Score=43.62  Aligned_cols=27  Identities=33%  Similarity=0.912  Sum_probs=16.8

Q ss_pred             CcccccccccCCChhHHHHH-HHhhcCC
Q psy12834        203 PYQCDICNATFIYPEHFKKH-RRIHTGE  229 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  229 (275)
                      ||.|+.|++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4566554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.3e-07  Score=43.33  Aligned_cols=24  Identities=33%  Similarity=0.856  Sum_probs=11.3

Q ss_pred             CcccccccccCCChhHHHHHHHhh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      ||.|+.|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344444444444444444444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.00  E-value=4.5e-06  Score=40.55  Aligned_cols=26  Identities=27%  Similarity=0.580  Sum_probs=18.3

Q ss_pred             CCceecccccccccCHHHHHHHHHhh
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTH   36 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~   36 (275)
                      +++|.|+.|++.|.....|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35677777777777777777777655

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.99  E-value=3.5e-06  Score=41.03  Aligned_cols=25  Identities=32%  Similarity=0.663  Sum_probs=17.9

Q ss_pred             CceecccccccccCHHHHHHHHHhh
Q psy12834         12 RPYECKTCKKTFVSKYTYKAHLVTH   36 (275)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~H~~~~   36 (275)
                      ++|.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5677777777777777777777654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.97  E-value=4.9e-06  Score=40.75  Aligned_cols=26  Identities=42%  Similarity=0.824  Sum_probs=18.7

Q ss_pred             CceecccccccccCHHHHHHHHHhhc
Q psy12834         12 RPYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      ++|.|+.|++.|.....|..|++.|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56777777777777777777776654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.92  E-value=9.3e-06  Score=40.30  Aligned_cols=28  Identities=32%  Similarity=0.736  Sum_probs=20.7

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcC
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +++|.|+.|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3677777777777777777777777664

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.92  E-value=8.9e-07  Score=45.31  Aligned_cols=31  Identities=26%  Similarity=0.447  Sum_probs=23.2

Q ss_pred             CCccCCcccccccChhHHHHHHhhccCCCCc
Q psy12834         97 RPFICRVCGKSFVRKAEVKDHERTHTGEKPY  127 (275)
Q Consensus        97 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  127 (275)
                      +||.|..|++.|.....|..|++.|.++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3677788888887777777787777777664

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.92  E-value=3.6e-06  Score=47.31  Aligned_cols=36  Identities=33%  Similarity=0.743  Sum_probs=26.6

Q ss_pred             hhhcccCCCCceecc--cccccccCHHHHHHHHHhhcC
Q psy12834          3 DHLVSHTGARPYECK--TCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      .|...|.++++|.|+  .|++.|.....|..|+++|.+
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            345667778888884  688888888888888877764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=5.6e-06  Score=50.11  Aligned_cols=33  Identities=12%  Similarity=-0.041  Sum_probs=28.9

Q ss_pred             hcCCCceeCcccchhhhhhhHHHhhhccccccc
Q psy12834        226 HTGEKPYVCEVRLAVFYYVTCLFNMIQPKRFRL  258 (275)
Q Consensus       226 h~~~~~~~C~~C~~~~~~~~~~~~H~~~~~~~~  258 (275)
                      +.+++||.|..|++.|...+.|..|++.|....
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            677899999999999999999999998765543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.87  E-value=1.3e-05  Score=42.33  Aligned_cols=31  Identities=26%  Similarity=0.399  Sum_probs=24.7

Q ss_pred             cCCCCceeccc--ccccccCHHHHHHHHHhhcC
Q psy12834          8 HTGARPYECKT--CKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         8 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~   38 (275)
                      |+++++|.|++  |++.|.....|..|+++|.+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            56778888874  88888888888888888764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.86  E-value=7.1e-06  Score=40.45  Aligned_cols=25  Identities=32%  Similarity=0.764  Sum_probs=16.8

Q ss_pred             Ccccc--cccccCCChhHHHHHHHhhc
Q psy12834        203 PYQCD--ICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       203 ~~~C~--~C~~~f~~~~~l~~H~~~h~  227 (275)
                      +|.|+  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  67777766666666666664

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.84  E-value=1e-05  Score=39.85  Aligned_cols=27  Identities=30%  Similarity=0.567  Sum_probs=15.6

Q ss_pred             CccCCcccccccChhHHHHHHhhccCC
Q psy12834         98 PFICRVCGKSFVRKAEVKDHERTHTGE  124 (275)
Q Consensus        98 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  124 (275)
                      ||.|..|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455666666666666666666555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.84  E-value=1.2e-05  Score=39.97  Aligned_cols=29  Identities=45%  Similarity=0.848  Sum_probs=24.8

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      +||.|..|++.|.....|..|+...|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            47999999999999999999954477765

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.83  E-value=1.4e-05  Score=39.28  Aligned_cols=26  Identities=42%  Similarity=0.984  Sum_probs=13.4

Q ss_pred             CccCCcccccccChhHHHHHHhhccC
Q psy12834         98 PFICRVCGKSFVRKAEVKDHERTHTG  123 (275)
Q Consensus        98 ~~~C~~C~~~f~~~~~l~~H~~~~~~  123 (275)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            44555555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=1.5e-05  Score=39.18  Aligned_cols=27  Identities=33%  Similarity=0.719  Sum_probs=19.9

Q ss_pred             CceecccccccccCHHHHHHHHHhhcC
Q psy12834         12 RPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      ++|.|+.|++.|.....|..|+++|.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            467777777777777777777777664

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.79  E-value=1.6e-05  Score=39.43  Aligned_cols=27  Identities=19%  Similarity=0.457  Sum_probs=14.4

Q ss_pred             CccCCcccccccChhHHHHHHhhccCC
Q psy12834         98 PFICRVCGKSFVRKAEVKDHERTHTGE  124 (275)
Q Consensus        98 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  124 (275)
                      +|.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            455555555555555555555555443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.79  E-value=2e-05  Score=39.87  Aligned_cols=29  Identities=41%  Similarity=0.723  Sum_probs=25.4

Q ss_pred             CCCCCCC--CChhhccChhhHHHHHHhhcCCC
Q psy12834        172 DKRYPCT--SCPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       172 ~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      ++||.|.  .|++.|.....|..|++ .|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHH-HccCC
Confidence            4689999  89999999999999987 67665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.98  E-value=3.2e-06  Score=40.71  Aligned_cols=25  Identities=40%  Similarity=0.502  Sum_probs=22.8

Q ss_pred             CceeCcccchhhhhhhHHHhhhccc
Q psy12834        230 KPYVCEVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       230 ~~~~C~~C~~~~~~~~~~~~H~~~~  254 (275)
                      +||.|..|++.|...+.|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4799999999999999999999754

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.76  E-value=1.9e-05  Score=39.63  Aligned_cols=28  Identities=43%  Similarity=0.793  Sum_probs=24.7

Q ss_pred             CCCCCC--CChhhccChhhHHHHHHhhcCCC
Q psy12834        173 KRYPCT--SCPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       173 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      +||.|+  .|++.|...+.|..|++ .|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~-~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHH-HhcCC
Confidence            479998  99999999999999987 67665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.76  E-value=2.1e-05  Score=47.34  Aligned_cols=45  Identities=16%  Similarity=0.214  Sum_probs=22.0

Q ss_pred             ccccCCChhHHHHHH-HhhcCCC------ceeCc--ccchhhhhhhHHHhhhcc
Q psy12834        209 CNATFIYPEHFKKHR-RIHTGEK------PYVCE--VRLAVFYYVTCLFNMIQP  253 (275)
Q Consensus       209 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~~~~~~~~~~H~~~  253 (275)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|+..+.....|.+|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            444455555555554 2343332      45554  455555555555555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.74  E-value=2e-05  Score=38.03  Aligned_cols=25  Identities=36%  Similarity=0.886  Sum_probs=14.7

Q ss_pred             ccCCcccccccChhHHHHHHhhccC
Q psy12834         99 FICRVCGKSFVRKAEVKDHERTHTG  123 (275)
Q Consensus        99 ~~C~~C~~~f~~~~~l~~H~~~~~~  123 (275)
                      |.|..|++.|.....|..|++.|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5566666666666666666655543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=1.8e-05  Score=38.84  Aligned_cols=26  Identities=27%  Similarity=0.548  Sum_probs=13.9

Q ss_pred             CccCCcccccccChhHHHHHHhhccC
Q psy12834         98 PFICRVCGKSFVRKAEVKDHERTHTG  123 (275)
Q Consensus        98 ~~~C~~C~~~f~~~~~l~~H~~~~~~  123 (275)
                      +|.|..|++.|.....|..|++.|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555555555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=4.6e-06  Score=41.25  Aligned_cols=28  Identities=43%  Similarity=0.729  Sum_probs=24.4

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      +||.|..|++.|...+.|..|++ .|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVR-QHTGE   28 (29)
Confidence            47999999999999999999987 56554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.84  E-value=6e-06  Score=41.10  Aligned_cols=29  Identities=38%  Similarity=0.756  Sum_probs=24.8

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCCC
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      ++||.|..|++.|.....|..|++ .|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVR-IHTGE   29 (30)
Confidence            368999999999999999999987 56554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.62  E-value=0.00011  Score=44.10  Aligned_cols=52  Identities=19%  Similarity=0.370  Sum_probs=44.2

Q ss_pred             CCCC--CChhhccChhhHHHHHHhhcCCCC------Ccccc--cccccCCChhHHHHHHHhh
Q psy12834        175 YPCT--SCPKAFKRRRLLDYHIKAAHTGER------PYQCD--ICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       175 ~~C~--~C~~~f~~~~~l~~H~~~~H~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  226 (275)
                      +.|.  .|++.|.+...|..|+...|.+.+      +|.|.  .|+..+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            3454  499999999999999977887655      79997  7999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.52  E-value=6.7e-05  Score=36.68  Aligned_cols=26  Identities=27%  Similarity=0.593  Sum_probs=18.3

Q ss_pred             Cceecc--cccccccCHHHHHHHHHhhc
Q psy12834         12 RPYECK--TCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        12 ~~~~C~--~C~~~f~~~~~l~~H~~~~~   37 (275)
                      ++|.|+  .|++.|.....|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            356777  77777777777777776664

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.15  E-value=0.00025  Score=48.96  Aligned_cols=80  Identities=13%  Similarity=0.091  Sum_probs=52.7

Q ss_pred             CCCCCCCCCCCChhhccChhhHHHHHHh-hcCCC-CCcccccc------cccCCChhHHHHHHHhhcCCCceeCcccchh
Q psy12834        169 HFNDKRYPCTSCPKAFKRRRLLDYHIKA-AHTGE-RPYQCDIC------NATFIYPEHFKKHRRIHTGEKPYVCEVRLAV  240 (275)
Q Consensus       169 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~H~~~-~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  240 (275)
                      ..-.+++.|.+|+..|.+.+.+..|+.. .|... +.+.+...      +..+....    +...+.+...|.|.+|+..
T Consensus        27 ~~~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~  102 (127)
T 1zu1_A           27 SHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMT  102 (127)
T ss_dssp             TTTBCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEE
T ss_pred             cccCCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCE
Confidence            3345679999999999999999999842 23221 22322110      12222111    1123456677999999999


Q ss_pred             hhhhhHHHhhhc
Q psy12834        241 FYYVTCLFNMIQ  252 (275)
Q Consensus       241 ~~~~~~~~~H~~  252 (275)
                      |++...+.+|+.
T Consensus       103 f~s~~~~~~H~~  114 (127)
T 1zu1_A          103 FSSPVVAESHYI  114 (127)
T ss_dssp             CSSHHHHHHHHT
T ss_pred             eCCHHHHHHHHC
Confidence            999999999995

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.09  E-value=0.00078  Score=46.50  Aligned_cols=28  Identities=29%  Similarity=0.497  Sum_probs=24.1

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHH
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRR  224 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~  224 (275)
                      .+.....|.|..|+.+|.+...|..|+.
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3456677999999999999999999985

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.40  E-value=0.0052  Score=44.74  Aligned_cols=131  Identities=18%  Similarity=0.284  Sum_probs=82.4

Q ss_pred             CCceecccccccccCHH-----------HHHHHHHhhcCCCCCcccccchhhcccch-----HHHHHHhhhcCCCccccC
Q psy12834         11 ARPYECKTCKKTFVSKY-----------TYKAHLVTHTDRKRPFSCEKCDKSFYTQQ-----NLVQHEKTHSGSKDFVCT   74 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~-----------~l~~H~~~~~~~~~~~~C~~C~~~f~~~~-----~l~~H~~~~~~~~~~~C~   74 (275)
                      +..+.|++|...|..+.           -+...+...     ...|+.|...+....     .+.+-+    ..-...|+
T Consensus        16 ~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~-----~~~CP~Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~   86 (170)
T 3hcs_A           16 ESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDA-----GHKCPVDNEILLENQLFPDNFAKREI----LSLMVKCP   86 (170)
T ss_dssp             CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHH-----CSBCTTTCCBCCGGGCEECHHHHHHH----HTSEEECC
T ss_pred             CCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhC-----CCCCCCCccCcchhhhhhhHHHHHHH----hhcccCCC
Confidence            34577888776665542           233322211     238999977665431     111111    12345674


Q ss_pred             --cchhhcCChHHHHHHHHhhcCCCCccCCcccccccChhHHHHHHhhccCCCCccccccccccccccCCCccccccccc
Q psy12834         75 --ECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLL  152 (275)
Q Consensus        75 --~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~  152 (275)
                        -|+.... ...+..|. ....-.++.|+.|+..+ .+..|..|+...-..+...|+.|+..+                
T Consensus        87 n~GC~~~~~-~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~----------------  147 (170)
T 3hcs_A           87 NEGCLHKME-LRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM----------------  147 (170)
T ss_dssp             STTCCCEEE-GGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE----------------
T ss_pred             CCCCCceec-HhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc----------------
Confidence              4766554 46788887 34556778999999887 466788999887888888999999988                


Q ss_pred             ccccccchHHHHHhhcCCCCCC
Q psy12834        153 CFLSQRSNLQSHKRATHFNDKR  174 (275)
Q Consensus       153 ~~~~~~~~~~~h~~~~h~~~~~  174 (275)
                          ....+..|.. ...++.+
T Consensus       148 ----~~~~l~~H~~-~~~~~~~  164 (170)
T 3hcs_A          148 ----AFEDKEIHDQ-NCPLALE  164 (170)
T ss_dssp             ----EGGGHHHHHT-TCCC---
T ss_pred             ----CHHHHHhHHH-hCcChhh
Confidence                3456778886 5655543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.34  E-value=0.00075  Score=45.79  Aligned_cols=29  Identities=28%  Similarity=0.413  Sum_probs=17.5

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHh
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      .|+++++|.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            35555666666666666666666666543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.21  E-value=0.0013  Score=47.96  Aligned_cols=104  Identities=14%  Similarity=0.301  Sum_probs=71.9

Q ss_pred             eecccccccccCHH-----HHHHHHHhhcCCCCCcccc--cchhhcccchHHHHHHhhhcCCCccccCcchhhcCChHHH
Q psy12834         14 YECKTCKKTFVSKY-----TYKAHLVTHTDRKRPFSCE--KCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNL   86 (275)
Q Consensus        14 ~~C~~C~~~f~~~~-----~l~~H~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l   86 (275)
                      ..||.|...+....     .+..-+.     .....|+  -|+.... ...+..|...- ...+..|+.|+..+ .+..|
T Consensus        54 ~~CP~Cr~~~~~~~~~~~~~~~~~i~-----~l~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~-~r~~l  125 (170)
T 3hcs_A           54 HKCPVDNEILLENQLFPDNFAKREIL-----SLMVKCPNEGCLHKME-LRHLEDHQAHC-EFALMDCPQCQRPF-QKFHI  125 (170)
T ss_dssp             SBCTTTCCBCCGGGCEECHHHHHHHH-----TSEEECCSTTCCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEE-EGGGH
T ss_pred             CCCCCCccCcchhhhhhhHHHHHHHh-----hcccCCCCCCCCceec-HhHHHHHHhcC-CceeeECCCCChHH-HHHHH
Confidence            38999987665431     1222222     2356784  5776544 56788887432 34567899999887 46889


Q ss_pred             HHHHHhhcCCCCccCCcccccccChhHHHHHHhhccCCCC
Q psy12834         87 EVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKP  126 (275)
Q Consensus        87 ~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  126 (275)
                      ..|.....+.+...|+.|+..+. ...+..|.....|+.+
T Consensus       126 ~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          126 NIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             HHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC---
T ss_pred             HHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhh
Confidence            99998888889999999998776 4568899998887654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.15  E-value=0.00089  Score=45.43  Aligned_cols=31  Identities=19%  Similarity=0.052  Sum_probs=27.6

Q ss_pred             HhhcCCCceeCcccchhhhhhhHHHhhhccc
Q psy12834        224 RIHTGEKPYVCEVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       224 ~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~  254 (275)
                      ..|+|+++|.|..|++.|.+.+.|..|++.+
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            3478899999999999999999999999644

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.02  E-value=0.01  Score=32.14  Aligned_cols=25  Identities=16%  Similarity=0.381  Sum_probs=20.4

Q ss_pred             CCceecccccccccCHHHHHHHHHh
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVT   35 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~   35 (275)
                      ..+|.||.|+..|.....|+.||+-
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CCceeCCcccccccchHHHHhhhhh
Confidence            3678888888888888888888874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.99  E-value=0.0041  Score=33.70  Aligned_cols=23  Identities=26%  Similarity=0.470  Sum_probs=16.0

Q ss_pred             CCCCCCCChhhccChhhHHHHHH
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIK  195 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~  195 (275)
                      .+|.|+.|+..|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45667777777777777777765

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.87  E-value=0.0052  Score=31.14  Aligned_cols=28  Identities=25%  Similarity=0.427  Sum_probs=23.8

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCCC
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      .|.||+|.+.|.+...|..|+...|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999999999999998888654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.57  E-value=0.013  Score=29.72  Aligned_cols=26  Identities=23%  Similarity=0.354  Sum_probs=21.7

Q ss_pred             ceecccccccccCHHHHHHHHHhhcC
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      .|.||+|.+.+.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            48899999899999999988887664

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=91.05  E-value=0.19  Score=24.13  Aligned_cols=24  Identities=17%  Similarity=0.372  Sum_probs=20.1

Q ss_pred             ceecccccccccCHHHHHHHHHhh
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTH   36 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~   36 (275)
                      .|.|++|.....+...|+.|.+..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e~~   26 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVMEC   26 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHHHC
T ss_pred             cccCccccccCcChHHHHHHHHHH
Confidence            478999999999999999988643

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=90.92  E-value=0.06  Score=34.65  Aligned_cols=54  Identities=19%  Similarity=0.266  Sum_probs=36.6

Q ss_pred             cccccccccCCChhHHHHHHHhhcCCCceeCc---ccchhhhhhhHHHhhhcccccccCCcccc
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIHTGEKPYVCE---VRLAVFYYVTCLFNMIQPKRFRLGRPHLL  264 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~---~C~~~~~~~~~~~~H~~~~~~~~~~~~~~  264 (275)
                      -.|+.|...+.....       +..+..|-|.   .|.+.|-+..+|+.|+...|.+.++|+-.
T Consensus        38 k~Cp~C~~~V~rVe~-------~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~~~~~   94 (101)
T 3vk6_A           38 KMCPGCSDPVQRIEQ-------CTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKPVTR   94 (101)
T ss_dssp             CBCTTTCCBCSEEEE-------EEGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCCCCCS
T ss_pred             CCCcCcCCeeeeeEE-------eccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCCCCCC
Confidence            457777666654332       2234567777   58888888888888888777777776644

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=90.65  E-value=0.31  Score=27.15  Aligned_cols=47  Identities=17%  Similarity=0.306  Sum_probs=31.5

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCCcccccc-hhhcccchHHHHHHhh
Q psy12834         14 YECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKC-DKSFYTQQNLVQHEKT   64 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C-~~~f~~~~~l~~H~~~   64 (275)
                      -.|.+|.....+...|..|..+...    -+||+| .....+.+.|+.|.+.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~----gqCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCIN----GQCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTT----TBCTTTCCBCCSSHHHHHHHHTT
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCC----CCCCcccCcCCcCHHHHHHHHHH
Confidence            4577777777777777777777663    357777 4455566777777643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.40  E-value=0.29  Score=24.80  Aligned_cols=25  Identities=32%  Similarity=0.398  Sum_probs=17.2

Q ss_pred             CCCceecccccccccCHHHHHHHHH
Q psy12834         10 GARPYECKTCKKTFVSKYTYKAHLV   34 (275)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~H~~   34 (275)
                      ....+.|..|+..|.+...+..|.+
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhhe
Confidence            3456677777777777777777765

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.36  E-value=0.2  Score=24.40  Aligned_cols=26  Identities=31%  Similarity=0.505  Sum_probs=21.8

Q ss_pred             CCCCCChhhccChhhHHHHHHhhcCC
Q psy12834        175 YPCTSCPKAFKRRRLLDYHIKAAHTG  200 (275)
Q Consensus       175 ~~C~~C~~~f~~~~~l~~H~~~~H~~  200 (275)
                      --|..|.+.|+....|..|++..|..
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            34999999999999999999876643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.28  E-value=0.45  Score=24.14  Aligned_cols=22  Identities=18%  Similarity=0.466  Sum_probs=9.9

Q ss_pred             cccCcchhhcCChHHHHHHHHh
Q psy12834         71 FVCTECGKAFGTLRNLEVHLAV   92 (275)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~   92 (275)
                      +.|..|+..|.+...+..|.+.
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhee
Confidence            3444444444444444444443

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=87.99  E-value=1.2  Score=24.87  Aligned_cols=46  Identities=22%  Similarity=0.442  Sum_probs=31.2

Q ss_pred             CCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCC-ChhHHHHHHHh
Q psy12834        176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFI-YPEHFKKHRRI  225 (275)
Q Consensus       176 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~-~~~~l~~H~~~  225 (275)
                      .|.+|.....+...|..|..+--.+    +||+|-.... +.++|+.|.++
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g----qCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING----QCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT----BCTTTCCBCCSSHHHHHHHHTT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC----CCCcccCcCCcCHHHHHHHHHH
Confidence            4778888888888888886643333    5777765544 56677777654

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=87.06  E-value=0.34  Score=26.15  Aligned_cols=12  Identities=42%  Similarity=0.957  Sum_probs=6.6

Q ss_pred             CCCCCChhhccC
Q psy12834        175 YPCTSCPKAFKR  186 (275)
Q Consensus       175 ~~C~~C~~~f~~  186 (275)
                      |.|..||+.|+.
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            556666666654

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=86.11  E-value=0.26  Score=27.54  Aligned_cols=21  Identities=19%  Similarity=0.629  Sum_probs=18.2

Q ss_pred             eecccccccccCHHHHHHHHH
Q psy12834         14 YECKTCKKTFVSKYTYKAHLV   34 (275)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~H~~   34 (275)
                      -+|..|+..|....+++.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            689999999999999988884

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.96  E-value=0.28  Score=29.97  Aligned_cols=53  Identities=13%  Similarity=0.170  Sum_probs=38.3

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhc
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQ  252 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~  252 (275)
                      |.....|.|..|+.++ .+..|..|+..-.+-..|.|--|+..|.. .++..|.+
T Consensus         5 ~~~MV~F~C~~Cgd~l-KK~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            5 SSGMVFFTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             SCCCCEEEESSSCCEE-ETTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             CCceeEEEcCCCCCee-ecccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            3444557888888665 56677888776666567888889999864 66778864

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=84.84  E-value=0.43  Score=31.00  Aligned_cols=29  Identities=28%  Similarity=0.622  Sum_probs=18.4

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATF  213 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  213 (275)
                      .||.|..||..|.            -...+|-+||.|+...
T Consensus        66 ~p~~C~~CG~~F~------------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK------------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC------------CCSSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeec------------ccCCCCCCCcCCCCCc
Confidence            4677888887771            1234566777776544

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=84.73  E-value=0.16  Score=30.87  Aligned_cols=40  Identities=25%  Similarity=0.342  Sum_probs=23.8

Q ss_pred             CcccccccccCCChhHHHHHHHhh----------------cCCCceeCcccchhhhh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIH----------------TGEKPYVCEVRLAVFYY  243 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h----------------~~~~~~~C~~C~~~~~~  243 (275)
                      .-+||+||.... ...|..-|..-                ..+-.|+|+.||+.|.-
T Consensus         8 ~~~~PlCG~~L~-W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG   63 (95)
T 2k5c_A            8 MAKCPICGSPLK-WEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYG   63 (95)
T ss_dssp             CEECSSSCCEEC-HHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEET
T ss_pred             cccCCcCCCccC-HHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhc
Confidence            357888886653 34444443221                11235999999998853

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.46  E-value=0.76  Score=28.10  Aligned_cols=43  Identities=21%  Similarity=0.532  Sum_probs=28.2

Q ss_pred             CCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhccc
Q psy12834         10 GARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYT   54 (275)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~   54 (275)
                      ..-.|.|..||..+.-+ .+..|.....+ ...|.|..|+..|..
T Consensus         7 ~MV~F~C~~Cgd~lKK~-kv~~H~~~Cr~-~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            7 GMVFFTCNACGESVKKI-QVEKHVSNCRN-CECLSCIDCGKDFWG   49 (79)
T ss_dssp             CCCEEEESSSCCEEETT-HHHHHHHHCTT-CCEEEETTTTEEEEG
T ss_pred             ceeEEEcCCCCCeeecc-cchhHHhhCCC-CCcEEecccCCeeCC
Confidence            34467788888777643 67777665543 235777778777764

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=82.18  E-value=0.7  Score=24.12  Aligned_cols=26  Identities=15%  Similarity=0.399  Sum_probs=14.9

Q ss_pred             CCCceecccccccccCHHHHHHHHHhh
Q psy12834         10 GARPYECKTCKKTFVSKYTYKAHLVTH   36 (275)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~H~~~~   36 (275)
                      ....|.|+.||..+.. ..++.|.--|
T Consensus         6 ~~~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            6 AEDQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             CCCEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             cCCCcccccccCcCCc-ccccchhhHH
Confidence            3455667777766665 3345555444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	275
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	6e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-07
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.004
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	8e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	6e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	5e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.004
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	8e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.001
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (126), Expect = 3e-10
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 199 TGERPYQCDICNATFIYPEHFKKH-RRIHTGEKPYVCEV 236
           +  +PY C  C   F  P+H   H +++HT E+P+ C+V
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (118), Expect = 4e-09
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 94  TGNRPFICRVCGKSFVRKAEVKDHER-THTGEKPYQCE 130
           +  +P+IC+ CGK F R   +  H +  HT E+P++C+
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (110), Expect = 5e-08
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI 208
            K Y C SC K F R   L+ HIK  HT ERP++C +
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 40 KRPFSCEKCDKSFYTQQNLVQHEK-THSGSKDFVC 73
           +P+ C+ C K F    +L  H K  H+  +   C
Sbjct: 3  GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 19/56 (33%)

Query: 122 TGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPC 177
           +  KPY C+ CG  F                   S+  +L  H +  H +++ + C
Sbjct: 1   SVGKPYICQSCGKGF-------------------SRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 9  TGARPYECKTCKKTFVSKYTYKAHL-VTHTDRKRPFSCE 46
          +  +PY C++C K F        H+   HT  + P  C+
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER-PHKCQ 38

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (121), Expect = 1e-09
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE 229
           H+GE+PY C  C   F       +H+R+HTGE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (118), Expect = 3e-09
 Identities = 15/33 (45%), Positives = 23/33 (69%)

Query: 92  VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
           +H+G +P+ C  CGK+F R + +  H+R HTGE
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 17/31 (54%), Positives = 18/31 (58%)

Query: 65 HSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
          HSG K + C ECGKAF     L  H  VHTG
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 3e-05
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
          H+G +PY C  C K F        H   HT
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 4e-05
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 36 HTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
          H+  K P+ C +C K+F     LVQH++ H+G
Sbjct: 2  HSGEK-PYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 20/49 (40%)

Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
           H+GEKPY C  CG  F                   S+ S L  H+R  H
Sbjct: 2   HSGEKPYGCVECGKAF-------------------SRSSILVQHQR-VH 30

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 6e-08
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 101 CRVCGKSFVRKAEVKDHERTHTGEKPYQCEF 131
              CGKSF  K  +K+H + H+  + Y CEF
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 2e-06
 Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 204 YQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCE 235
           + C    C  +F + +H K+H ++H+  + Y+CE
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 4e-04
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 71  FVCTE--CGKAFGTLRNLEVHLAVHTGNRPFIC 101
           F C E  CGK+F   ++L+ H+ +H+  R +IC
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCD 207
           P  +C K+F  ++ L  H+K  H+  R Y C+
Sbjct: 5   PEPACGKSFNFKKHLKEHMKL-HSDTRDYICE 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (107), Expect = 1e-07
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE 229
               R Y+CD C  +F +     KHRR HTGE
Sbjct: 7   QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (100), Expect = 8e-07
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
                   R + C  CGKSF   +++  H RTHTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 60 QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
          + E      + + C ECGK+F    +L  H   HTG
Sbjct: 2  RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 6/25 (24%), Positives = 9/25 (36%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGS 141
            E      + Y+C+ CG  F     
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSD 27

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 4e-04
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
                +R+  + C++C KSF    +L +H +TH+G
Sbjct: 3  SEWQQRERR-RYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 4e-04
 Identities = 10/34 (29%), Positives = 12/34 (35%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
                  R Y+C  C K+F        H  THT
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.002
 Identities = 4/27 (14%), Positives = 9/27 (33%)

Query: 221 KHRRIHTGEKPYVCEVRLAVFYYVTCL 247
           +        + Y C+     F + + L
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDL 28

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 1e-07
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
           HTGE+PY C  C+ TF   +    H + +    
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 3e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 92  VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK 125
            HTG +P+ C  C K+F +K  +  H + +    
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 9e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHTD 38
          HTG +PY C  C KTF  K     H   + D
Sbjct: 3  HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 63 KTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
          +TH+G K + C+ C K F   + L++H   +  
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 1e-04
 Identities = 15/55 (27%), Positives = 19/55 (34%), Gaps = 20/55 (36%)

Query: 119 RTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDK 173
           RTHTGEKPY C  C   F                    Q+  L  H +  + +  
Sbjct: 1   RTHTGEKPYACSHCDKTF-------------------RQKQLLDMHFK-RYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
          THT  K P++C  CDK+F  +Q L  H K +    
Sbjct: 2  THTGEK-PYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 43.4 bits (103), Expect = 3e-07
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEK 125
           R F+C VC ++F R+  +K H R+HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEK 230
           R + C++C   F   EH K+H R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
          R F CE C ++F  Q++L +H ++H+  K
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
          + FVC  C +AF    +L+ H   HT  +
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.8 bits (103), Expect = 4e-07
 Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 186 RRRLLDYHIKAAHTGERPYQCDICNA--TFIYPEHFKKHRRIHTGEK 230
            R  +D ++K     ++ ++C       TF    + + H + H  ++
Sbjct: 3   PRGSIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.7 bits (82), Expect = 2e-04
 Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 93  HTGNRPFICRVC--GKSFVRKAEVKDHERTHTGEK 125
              ++ F C      K+F R+  ++ H +TH  ++
Sbjct: 13  EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 7e-07
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVH 93
          + + C+ C KSF  +    +H   H G + + C  CGK F    +L  H+ +H
Sbjct: 2  KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 1e-06
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 69  KDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTH 121
           K + C +CGK+F      + H+++H G RP+ C VCGK F  K  +  H + H
Sbjct: 2   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 5e-05
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTH 65
          + Y C+ C K+F  K     H+ +     RP+ C  C K F  + +LV H K H
Sbjct: 2  KLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIH 226
           DK YPC  C K+F  +   D H+   H G RPY C +C   F    H   H +IH
Sbjct: 1   DKLYPC-QCGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.004
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGS 141
           + + C+ CGKSF  K++   H   H G +PY C  CG +F+ K  
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH 45

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.4 bits (100), Expect = 8e-07
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE 229
            +G+RP+ C IC + F    +  +H ++HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 3e-06
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 93  HTGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
            +G RPF+CR+C  +F  KA    H + HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 6e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHTD 38
           +G RP+ C+ C   F +K     HL  HTD
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 4e-04
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 HSGSKDFVCTECGKAFGTLRNLEVHLAVHTGN 96
           SG + FVC  C  AF T  N   HL VHT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGS 68
          RPF C  C  +F T+ N  +H K H+ +
Sbjct: 6  RPFVCRICLSAFTTKANCARHLKVHTDT 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 1e-06
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKH-RRIHTGE 229
           H+GE+PY+C IC+A F      K H  + HT  
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 3e-06
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 19/51 (37%)

Query: 119 RTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
           RTH+GEKPY+C  C A+F                   +Q   ++ H    H
Sbjct: 1   RTHSGEKPYECYICHARF-------------------TQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 92  VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK 125
            H+G +P+ C +C   F +   +K H      E 
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 63 KTHSGSKDFVCTECGKAFGTLRNLEVH-LAVHTGN 96
          +THSG K + C  C   F     +++H L  HT N
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 8  HTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
          H+G +PYEC  C   F    T K H++   
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.003
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
           TH  +K Y C  C   F +   +  HI   HT  
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 1/33 (3%)

Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
          TH+  K P+ C  C   F     +  H      
Sbjct: 2  THSGEK-PYECYICHARFTQSGTMKMHILQKHT 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 5e-06
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTGEK 125
           + F C  C K F+R   +  H +TH  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 6e-06
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEK 230
           + + C  C   F+  +H  KH + H  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
          + F+C +C K F    +L +H KTH   K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 7e-06
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTG 228
            TG +P+QC  C+ +F   +H   HR+ H  
Sbjct: 6   STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (92), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 89  HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
                TG +PF C  C +SF R   +  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 7e-05
 Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 20/53 (37%)

Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
             R  TG KP+QC  C   F                   S+  +L  H++  H
Sbjct: 2   STRGSTGIKPFQCPDCDRSF-------------------SRSDHLALHRK-RH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 4  HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
               TG +P++C  C ++F        H   H 
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 5e-04
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
            +  +G K F C +C ++F    +L +H   H  
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 7e-04
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTH 65
               T  K PF C  CD+SF    +L  H K H
Sbjct: 2  STRGSTGIK-PFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.003
 Identities = 8/26 (30%), Positives = 9/26 (34%)

Query: 222 HRRIHTGEKPYVCEVRLAVFYYVTCL 247
             R  TG KP+ C      F     L
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHL 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.5 bits (93), Expect = 8e-06
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTG 228
           ++P+QC IC   F   +H   H R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHTG 123
           +PF CR+C ++F R   +  H RTHTG
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSG 67
          +PF C  C ++F    +L  H +TH+G
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTG 95
          K F C  C + F    +L  H+  HTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 2/31 (6%)

Query: 97  RPFICRV--CGKSFVRKAEVKDHERTHTGEK 125
           RPF+C    CGK F R  E++ H+RTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 5e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHTGEK 230
           RP+ C    C   F   +  ++H+R HTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 97  RPFIC--RVCGKSFVRKAEVKDHERTHTGE 124
           +P  C    C KS+ R   +K H R+HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHTGE 229
           +P++C    C  ++   E+ K H R HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 97  RPFIC--RVCGKSFVRKAEVKDHERTHTGE 124
           +PF C    CGK F     ++ H R HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.004
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHTGE 229
           +P+QC    C   F    + + H RIHTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.8 bits (78), Expect = 8e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 97  RPFIC--RVCGKSFVRKAEVKDHERTHTG 123
           RP+ C    C + F R A++  H R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.001
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 97  RPFICRVCGKSFVRKAEVKDHERTHT 122
           +P+ C  CGK+F + + + +H+R HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.002
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 202 RPYQCDICNATFIYPEHFKKHRRIHT 227
           +PY+C  C   F        H+RIHT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 201 ERPYQCDI--CNATFIYPEHFKKHRRIHTGE 229
           +RPY CD   C+  F+      +H++ H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 97  RPFICRV--CGKSFVRKAEVKDHERTHTGE 124
           RP+ C    C K+FVR  ++  H+++H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	275
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.34
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.27
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.18
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.09
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.09
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.07
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.05
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.0
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.97
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.95
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.94
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.93
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.9
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.82
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.8
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.8
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.76
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.74
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.72
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.69
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.68
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.61
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.58
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.4
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.4
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.39
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.36
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.33
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.25
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.21
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.19
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.14
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.11
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.09
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.0
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.99
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.94
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.91
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.91
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.9
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.87
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.79
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.78
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.74
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.71
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.71
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.68
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.65
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.56
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.5
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.46
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.44
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.44
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.41
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.4
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.36
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.33
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.3
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.3
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.16
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.06
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.04
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.97
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.93
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.93
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.84
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.82
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.81
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.81
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.68
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.67
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.63
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.47
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.13
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.1
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.99
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.94
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.76
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.76
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.68
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.62
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.42
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.32
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.18
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.87
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.84
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.43
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.18
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.04
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.82
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.3
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.09
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.96
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.82
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.81
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.79
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.42
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.9
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.44
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.11
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.85
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	90.55
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.44
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.99
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	89.29
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.28
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.72
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	88.27
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	86.84
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.32
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	81.41
d1fu9a_	36	U-shaped transcription factor, different fingers {	81.25
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	81.1

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2e-17  Score=95.59  Aligned_cols=53  Identities=25%  Similarity=0.523  Sum_probs=37.4

Q ss_pred             CCCcccccccccCCChhHHHHHHHhhcCCCceeCcccchhhhhhhHHHhhhccc
Q psy12834        201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       201 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~~~~H~~~~  254 (275)
                      ++||+|. ||++|.....|..|+++|++++||.|+.||+.|...+.|..|++.|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4667773 7777777777777777777777777777777777777777776543

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.1e-16  Score=91.23  Aligned_cols=53  Identities=42%  Similarity=0.910  Sum_probs=50.6

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCCCCCcccccccccCCChhHHHHHHHhh
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      |+||.| .||+.|.....|..|++ .|++++||.|+.|+++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~-~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhh-ccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            589999 59999999999999987 899999999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.7e-13  Score=71.00  Aligned_cols=37  Identities=38%  Similarity=0.895  Sum_probs=27.3

Q ss_pred             CCCCcccccccccCCChhHHHHHHH-hhcCCCceeCcc
Q psy12834        200 GERPYQCDICNATFIYPEHFKKHRR-IHTGEKPYVCEV  236 (275)
Q Consensus       200 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  236 (275)
                      .++||+|..|+++|...++|..|++ +|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4577777777777777777777764 577777777764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.3e-12  Score=68.36  Aligned_cols=38  Identities=47%  Similarity=0.844  Sum_probs=35.7

Q ss_pred             CCCCCCCCCChhhccChhhHHHHHHhhcCCCCCccccc
Q psy12834        171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI  208 (275)
Q Consensus       171 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  208 (275)
                      .++||.|..||+.|...+.|..|++.+|++++||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            57899999999999999999999988999999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.2e-12  Score=64.75  Aligned_cols=33  Identities=42%  Similarity=0.904  Sum_probs=28.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +|++++||+|..|+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            488889999999999999999999999998876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=2.3e-12  Score=67.53  Aligned_cols=36  Identities=39%  Similarity=0.708  Sum_probs=30.0

Q ss_pred             HHHhhcCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        193 HIKAAHTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       193 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      |++ .|++++||+|+.|+++|...+.|..|+++|+||
T Consensus         3 H~~-~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCS-CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCc-ccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            434 788888888888888888888888888888876

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3.1e-11  Score=62.21  Aligned_cols=34  Identities=32%  Similarity=0.657  Sum_probs=26.6

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      .|++++||+|..|+++|...+.|..|+++|++++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            5778888888888888888888888888877664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=3e-11  Score=61.37  Aligned_cols=32  Identities=31%  Similarity=0.782  Sum_probs=24.3

Q ss_pred             cCCCCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       198 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      |++++||+|++|++.|...+.|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56777777777777777777777777777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.07  E-value=4e-11  Score=58.29  Aligned_cols=29  Identities=45%  Similarity=0.948  Sum_probs=25.1

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      +||+|++|+++|+..+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57889999999999999999999998875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=3.1e-11  Score=62.70  Aligned_cols=32  Identities=34%  Similarity=0.733  Sum_probs=21.9

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhcC
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      .|++++||+|+.|+++|+..+.|..|+++|.+
T Consensus         5 ~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             ccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56677777777777777777777777766653

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.8e-11  Score=62.41  Aligned_cols=36  Identities=28%  Similarity=0.467  Sum_probs=33.8

Q ss_pred             hhhcccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          3 DHLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         3 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +|+++|++++||.|++||+.|...+.|..|+++|.+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            689999999999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=4.6e-11  Score=57.32  Aligned_cols=28  Identities=43%  Similarity=0.972  Sum_probs=24.0

Q ss_pred             CCCcccccccccCCChhHHHHHHHhhcC
Q psy12834        201 ERPYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       201 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      ++||+|+.|+++|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=9.6e-11  Score=56.79  Aligned_cols=29  Identities=28%  Similarity=0.732  Sum_probs=24.7

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      +||.|+.|+++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=8e-11  Score=60.31  Aligned_cols=33  Identities=30%  Similarity=0.950  Sum_probs=28.7

Q ss_pred             ccccc--ccccCCChhHHHHHHHhhcCCCceeCcc
Q psy12834        204 YQCDI--CNATFIYPEHFKKHRRIHTGEKPYVCEV  236 (275)
Q Consensus       204 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  236 (275)
                      |.|+.  |++.|.....|..|+++|+|++||.|.+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67876  9999999999999999999999999874

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.8e-10  Score=59.70  Aligned_cols=34  Identities=24%  Similarity=0.566  Sum_probs=30.7

Q ss_pred             hhcccCCCCceecccccccccCHHHHHHHHHhhc
Q psy12834          4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus         4 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      |.++|++++||.|++|++.|.....|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            6788999999999999999999999999998886

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.5e-10  Score=58.60  Aligned_cols=31  Identities=39%  Similarity=0.784  Sum_probs=18.0

Q ss_pred             hcCCCCCcccccccccCCChhHHHHHHHhhc
Q psy12834        197 AHTGERPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       197 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      .|++++||+|+.|++.|+..++|..|++.++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            3556666666666666666666666654433

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=3.6e-10  Score=58.13  Aligned_cols=33  Identities=39%  Similarity=0.759  Sum_probs=29.8

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      ++|++++||.|++||+.|.....|..|+++|++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            578999999999999999999999999999885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=4.2e-10  Score=56.24  Aligned_cols=32  Identities=34%  Similarity=0.688  Sum_probs=27.7

Q ss_pred             ccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          7 SHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         7 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +|++++||.|++||+.|...+.|..|+++|.+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            57888999999999999999999999888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=4.4e-10  Score=57.67  Aligned_cols=33  Identities=33%  Similarity=0.753  Sum_probs=29.5

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      ++|+|++||.|++|++.|.....|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            578999999999999999999999999887765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.7e-10  Score=53.10  Aligned_cols=26  Identities=38%  Similarity=0.811  Sum_probs=20.8

Q ss_pred             CCcccccccccCCChhHHHHHHHhhc
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      +||+|..||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888774

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.4e-09  Score=52.91  Aligned_cols=28  Identities=39%  Similarity=0.829  Sum_probs=23.9

Q ss_pred             CCccccc--ccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDI--CNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||+|++  |+++|+..+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788888  888888888888888888876

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.80  E-value=1.6e-10  Score=63.14  Aligned_cols=40  Identities=18%  Similarity=0.461  Sum_probs=31.3

Q ss_pred             hHHHHHHhhcCCCCCccccc--ccccCCChhHHHHHHHhhcCCC
Q psy12834        189 LLDYHIKAAHTGERPYQCDI--CNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       189 ~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      .|..|+  .|.+++||+|++  |++.|...+.|..|+++|+|++
T Consensus         6 ~l~~h~--~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC--EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh--hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            344554  388888888876  8888888888888888888874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=2e-09  Score=54.46  Aligned_cols=31  Identities=39%  Similarity=0.824  Sum_probs=25.8

Q ss_pred             cCCCCceecccccccccCHHHHHHHHHhhcC
Q psy12834          8 HTGARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         8 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      |+|++||.|++|++.|.....|..|+++|.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            5788888888888888888888888888774

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.9e-09  Score=52.59  Aligned_cols=28  Identities=39%  Similarity=0.940  Sum_probs=24.1

Q ss_pred             CCccccc--ccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDI--CNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|++  |+++|+..+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788977  999999999999999998876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=3.2e-09  Score=50.73  Aligned_cols=27  Identities=30%  Similarity=0.803  Sum_probs=19.7

Q ss_pred             CCceecccccccccCHHHHHHHHHhhc
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      +|||.|++|++.|.....|..|+++|.
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            467777777777777777777777765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.72  E-value=4.1e-09  Score=50.99  Aligned_cols=29  Identities=34%  Similarity=0.818  Sum_probs=26.9

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGER  202 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  202 (275)
                      +||.|++|++.|...+.|..|++ .|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r-~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccC-cccCCC
Confidence            58999999999999999999998 898875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=5.9e-09  Score=51.23  Aligned_cols=29  Identities=41%  Similarity=1.005  Sum_probs=23.8

Q ss_pred             CCcccc--cccccCCChhHHHHHHHhhcCCC
Q psy12834        202 RPYQCD--ICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       202 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      +||.|+  .|+++|+..+.|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  48888888888888888888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=6.6e-09  Score=50.15  Aligned_cols=29  Identities=41%  Similarity=0.910  Sum_probs=26.7

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGER  202 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  202 (275)
                      +||.|++|++.|...+.|..|++ .|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r-~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIK-THQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHH-GGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcC-ccCCcC
Confidence            58999999999999999999998 788874

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=6.2e-09  Score=53.10  Aligned_cols=33  Identities=33%  Similarity=0.853  Sum_probs=30.1

Q ss_pred             CCCCC--ChhhccChhhHHHHHHhhcCCCCCccccc
Q psy12834        175 YPCTS--CPKAFKRRRLLDYHIKAAHTGERPYQCDI  208 (275)
Q Consensus       175 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  208 (275)
                      |.|+.  |++.|.....|.+|++ .|++++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeCCCCCEeCCC
Confidence            67876  9999999999999998 799999999974

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.6e-08  Score=46.98  Aligned_cols=25  Identities=32%  Similarity=0.696  Sum_probs=16.9

Q ss_pred             CceecccccccccCHHHHHHHHHhh
Q psy12834         12 RPYECKTCKKTFVSKYTYKAHLVTH   36 (275)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~H~~~~   36 (275)
                      |||+|++||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4666777777777666666666665

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=3.2e-08  Score=48.74  Aligned_cols=29  Identities=31%  Similarity=0.893  Sum_probs=21.8

Q ss_pred             CCCccccc--ccccCCChhHHHHHHHhhcCC
Q psy12834        201 ERPYQCDI--CNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       201 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      ++||.|++  |+++|+..+.|..|+++|+++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            46777766  888888888888887777754

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=1.7e-08  Score=48.56  Aligned_cols=27  Identities=44%  Similarity=1.025  Sum_probs=21.4

Q ss_pred             CCccccc--ccccCCChhHHHHHHHhhcC
Q psy12834        202 RPYQCDI--CNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       202 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  228 (275)
                      +||+|++  |+++|+..+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788866  88888888888888888875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=5.5e-08  Score=46.12  Aligned_cols=26  Identities=38%  Similarity=0.821  Sum_probs=19.3

Q ss_pred             CCccccc--ccccCCChhHHHHHHHhhc
Q psy12834        202 RPYQCDI--CNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       202 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  227 (275)
                      +||.|+.  |+++|+..+.|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777774

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=8.2e-08  Score=42.17  Aligned_cols=26  Identities=38%  Similarity=0.892  Sum_probs=21.1

Q ss_pred             CcccccccccCCChhHHHHHHHhhcC
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      |.+|+.|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46788888888888888888888865

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.39  E-value=3.8e-08  Score=53.52  Aligned_cols=32  Identities=31%  Similarity=0.733  Sum_probs=23.4

Q ss_pred             ccCCCCceeccc--ccccccCHHHHHHHHHhhcC
Q psy12834          7 SHTGARPYECKT--CKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus         7 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~   38 (275)
                      .|.++++|.|++  |++.|.....|..|+++|.+
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            477777777765  77777777777777777765

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.4e-07  Score=45.68  Aligned_cols=28  Identities=43%  Similarity=0.769  Sum_probs=25.5

Q ss_pred             CCCCCCC--ChhhccChhhHHHHHHhhcCCC
Q psy12834        173 KRYPCTS--CPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       173 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      +||.|++  |++.|...+.|..|++ .|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR-SHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH-HTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC-cCcCC
Confidence            5899988  9999999999999998 78775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.4e-07  Score=42.48  Aligned_cols=29  Identities=38%  Similarity=0.781  Sum_probs=22.0

Q ss_pred             CCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        201 ERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       201 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      ++||+|..|...-.+++.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46778888887777788888888877763

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3.6e-07  Score=44.24  Aligned_cols=27  Identities=30%  Similarity=0.827  Sum_probs=19.5

Q ss_pred             Cceeccc--ccccccCHHHHHHHHHhhcC
Q psy12834         12 RPYECKT--CKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        12 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +||.|+.  |++.|.....|..|+++|.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            5677765  77777777777777777764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=4.6e-07  Score=41.75  Aligned_cols=29  Identities=28%  Similarity=0.615  Sum_probs=22.9

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCC
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHTDR   39 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   39 (275)
                      +|||.||+|+.+|..+..+.-|+++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47888888888888888888888887753

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4.8e-07  Score=44.21  Aligned_cols=29  Identities=41%  Similarity=0.796  Sum_probs=25.8

Q ss_pred             CCCCCC--CChhhccChhhHHHHHHhhcCCCC
Q psy12834        173 KRYPCT--SCPKAFKRRRLLDYHIKAAHTGER  202 (275)
Q Consensus       173 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~  202 (275)
                      +||.|+  .|++.|...+.|.+|++ .|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r-~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC-cccccC
Confidence            589995  69999999999999998 798875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5.6e-07  Score=41.47  Aligned_cols=29  Identities=34%  Similarity=0.820  Sum_probs=24.1

Q ss_pred             CCCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        201 ERPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       201 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      ++||.|++|+..|..+..+..|+++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47888888888888888888888888764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=4.6e-07  Score=42.81  Aligned_cols=29  Identities=41%  Similarity=0.891  Sum_probs=22.3

Q ss_pred             cccccccccCCChhHHHHHHHhhcCCCce
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIHTGEKPY  232 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  232 (275)
                      .-|..||+.|.+.-.|..|..+|++|+||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            56777777777777777777777777776

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.11  E-value=1.1e-06  Score=43.04  Aligned_cols=28  Identities=43%  Similarity=0.727  Sum_probs=25.1

Q ss_pred             CCCCCCCC--ChhhccChhhHHHHHHhhcCC
Q psy12834        172 DKRYPCTS--CPKAFKRRRLLDYHIKAAHTG  200 (275)
Q Consensus       172 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  200 (275)
                      ++||.|++  |++.|...+.|.+|++ .|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r-~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh-hccC
Confidence            58999988  9999999999999988 6654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=9.1e-07  Score=42.31  Aligned_cols=26  Identities=35%  Similarity=0.813  Sum_probs=19.1

Q ss_pred             Cceeccc--ccccccCHHHHHHHHHhhc
Q psy12834         12 RPYECKT--CKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        12 ~~~~C~~--C~~~f~~~~~l~~H~~~~~   37 (275)
                      +||.|++  |++.|.+.+.|..|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            5677765  7777777777777777765

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=3.1e-06  Score=38.50  Aligned_cols=29  Identities=34%  Similarity=0.534  Sum_probs=18.7

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGE  201 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  201 (275)
                      +||+|.+|.....+.+.|..|+++.|+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            35666666666666666666666666554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.3e-06  Score=38.18  Aligned_cols=26  Identities=35%  Similarity=0.815  Sum_probs=18.7

Q ss_pred             CCcccccccccCCChhHHHHHHHhhc
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      +||+|..|+..-.+.++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56777777777777777777777765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=3.4e-06  Score=37.93  Aligned_cols=29  Identities=34%  Similarity=0.778  Sum_probs=24.3

Q ss_pred             CCCccCCcccccccChhHHHHHHhhccCC
Q psy12834         96 NRPFICRVCGKSFVRKAEVKDHERTHTGE  124 (275)
Q Consensus        96 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  124 (275)
                      ++||+|.+|.+...+.+.|..|++.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46888999988888888899998888763

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=3.9e-06  Score=38.09  Aligned_cols=24  Identities=42%  Similarity=1.016  Sum_probs=9.7

Q ss_pred             CcccccccccCCChhHHHHHHHhh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      ||.|..||..|..+.....|.++|
T Consensus         3 Pf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           3 PFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGGG
T ss_pred             Ccccchhhhhhhcchhhhhhhhhc
Confidence            344444444444444444443333

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4.5e-07  Score=45.43  Aligned_cols=25  Identities=28%  Similarity=0.611  Sum_probs=20.8

Q ss_pred             cCCCceeCcccchhhhhhhHHHhhh
Q psy12834        227 TGEKPYVCEVRLAVFYYVTCLFNMI  251 (275)
Q Consensus       227 ~~~~~~~C~~C~~~~~~~~~~~~H~  251 (275)
                      +|-+||.|.+|++.|.+.++++.|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            3567888888888888888888887

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2.1e-06  Score=40.53  Aligned_cols=25  Identities=36%  Similarity=0.691  Sum_probs=22.6

Q ss_pred             CCCCCCC--ChhhccChhhHHHHHHhhc
Q psy12834        173 KRYPCTS--CPKAFKRRRLLDYHIKAAH  198 (275)
Q Consensus       173 ~~~~C~~--C~~~f~~~~~l~~H~~~~H  198 (275)
                      +||.|++  |++.|...+.|.+|++ .|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r-~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL-TH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH-HH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh-hc
Confidence            5899987  9999999999999998 44

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=7.4e-06  Score=37.05  Aligned_cols=26  Identities=38%  Similarity=0.655  Sum_probs=19.1

Q ss_pred             cccccccccCCChhHHHHHHHhhcCC
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      |.|+.|+..+...+-|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777765

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=7e-06  Score=35.91  Aligned_cols=25  Identities=40%  Similarity=0.764  Sum_probs=16.8

Q ss_pred             ceecccccccccCHHHHHHHHHhhc
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      |.+|+.|++-|..+..|..|++.|.
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            3467777777777777777776664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=6.7e-06  Score=37.89  Aligned_cols=25  Identities=28%  Similarity=0.814  Sum_probs=13.6

Q ss_pred             Cccccc--ccccCCChhHHHHHHHhhc
Q psy12834        203 PYQCDI--CNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       203 ~~~C~~--C~~~f~~~~~l~~H~~~h~  227 (275)
                      ||.|.+  |++++++.++|+.|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455544  5555555555555555443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=1.1e-05  Score=36.62  Aligned_cols=27  Identities=26%  Similarity=0.642  Sum_probs=21.1

Q ss_pred             CCceecccccccccCHHHHHHHHHhhc
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      ++||.|.+||+.|.....-..|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478888888888888888888877764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.3e-05  Score=36.88  Aligned_cols=26  Identities=31%  Similarity=0.736  Sum_probs=20.0

Q ss_pred             Cceeccc--ccccccCHHHHHHHHHhhc
Q psy12834         12 RPYECKT--CKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        12 ~~~~C~~--C~~~f~~~~~l~~H~~~~~   37 (275)
                      |||.|..  |++.|.++++|+.|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5778865  7788888888888887665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=9.7e-06  Score=36.23  Aligned_cols=26  Identities=35%  Similarity=0.776  Sum_probs=17.4

Q ss_pred             cccccccccCCChhHHHHHHHhhcCC
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      ..|..||++|..++.|..|+.+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35666777777777777777666654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=1.7e-05  Score=34.83  Aligned_cols=26  Identities=42%  Similarity=0.782  Sum_probs=22.3

Q ss_pred             ccccccccCCChhHHHHHHHhhcCCC
Q psy12834        205 QCDICNATFIYPEHFKKHRRIHTGEK  230 (275)
Q Consensus       205 ~C~~C~~~f~~~~~l~~H~~~h~~~~  230 (275)
                      +|+.|.+.|.++-.|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68889999988888889988888874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=2.3e-05  Score=35.42  Aligned_cols=26  Identities=35%  Similarity=0.558  Sum_probs=23.4

Q ss_pred             ceecccccccccCHHHHHHHHHhhcC
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      .|.|+.||....-++.|+.|+++|.+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             CccccccCcccCCHHHHHHHHHHhcC
Confidence            37899999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.65  E-value=1.7e-05  Score=34.30  Aligned_cols=23  Identities=30%  Similarity=1.003  Sum_probs=11.9

Q ss_pred             cccccccccCCChhHHHHHHHhh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      |+|..|..+|..++.|..|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34555555555555555555544

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.56  E-value=1.2e-05  Score=34.75  Aligned_cols=24  Identities=17%  Similarity=0.235  Sum_probs=22.1

Q ss_pred             eeCcccchhhhhhhHHHhhhcccc
Q psy12834        232 YVCEVRLAVFYYVTCLFNMIQPKR  255 (275)
Q Consensus       232 ~~C~~C~~~~~~~~~~~~H~~~~~  255 (275)
                      |+|++|.++|..+++|..|.+.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999998764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.8e-05  Score=34.59  Aligned_cols=26  Identities=31%  Similarity=0.648  Sum_probs=23.8

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHT  199 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  199 (275)
                      +||+|..|+++-...++|..|++ +|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~r-ihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLR-IHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH-HSC
T ss_pred             CCcccccccchhcchhhHhhhhh-ccc
Confidence            68999999999999999999988 664

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=5e-05  Score=35.73  Aligned_cols=28  Identities=43%  Similarity=0.952  Sum_probs=14.0

Q ss_pred             cCCcccccccChhHHHHHHhhccCCCCc
Q psy12834        100 ICRVCGKSFVRKAEVKDHERTHTGEKPY  127 (275)
Q Consensus       100 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~  127 (275)
                      .|.+|++.|.+.-.|..|...|.+++||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4455555555555555555555555444

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=3.1e-05  Score=34.98  Aligned_cols=23  Identities=35%  Similarity=0.800  Sum_probs=16.1

Q ss_pred             CcccccccccCCChhHHHHHHHh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      ||.|..|+++|.+..+|..||.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=7.4e-05  Score=33.87  Aligned_cols=26  Identities=23%  Similarity=0.534  Sum_probs=22.3

Q ss_pred             CCcccccccccCCChhHHHHHHHhhc
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      +||+|..|.....+.++|..|++..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            58999999999999999999987644

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=3.8e-05  Score=34.66  Aligned_cols=23  Identities=43%  Similarity=0.873  Sum_probs=12.9

Q ss_pred             CcccccchhhcccchHHHHHHhh
Q psy12834         42 PFSCEKCDKSFYTQQNLVQHEKT   64 (275)
Q Consensus        42 ~~~C~~C~~~f~~~~~l~~H~~~   64 (275)
                      ||.|..|+..|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            35555555555555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.40  E-value=0.0001  Score=36.65  Aligned_cols=27  Identities=33%  Similarity=0.707  Sum_probs=17.5

Q ss_pred             CCceecccccccccCHHHHHHHHHhhc
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      .+.|.|..|++.|.+...|-.|+..|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            345666666666666666666666665

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.36  E-value=5.8e-05  Score=33.93  Aligned_cols=24  Identities=38%  Similarity=1.089  Sum_probs=15.2

Q ss_pred             Cccccc--ccccCCChhHHHHHHHhh
Q psy12834        203 PYQCDI--CNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       203 ~~~C~~--C~~~f~~~~~l~~H~~~h  226 (275)
                      ||+|+.  |++.|+..+.|..|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566654  666666666666666555

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=8.2e-05  Score=33.16  Aligned_cols=26  Identities=27%  Similarity=0.559  Sum_probs=22.3

Q ss_pred             CcccccccccCCChhHHHHHHHhhcC
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      |-+|+.|..+++++.+|+.|.++|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999988853

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=0.0001  Score=33.11  Aligned_cols=28  Identities=32%  Similarity=0.675  Sum_probs=22.4

Q ss_pred             CCcccccccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      ..|.|..|...|...-.|+.|+.+|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4578888888888888888888888775

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=4.1e-05  Score=35.54  Aligned_cols=27  Identities=33%  Similarity=0.808  Sum_probs=17.9

Q ss_pred             CCccccc--ccccCCChhHHHHHH-HhhcC
Q psy12834        202 RPYQCDI--CNATFIYPEHFKKHR-RIHTG  228 (275)
Q Consensus       202 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  228 (275)
                      +||.|..  |.+.|++.+.-..|+ +.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4667765  777777777777776 55654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.16  E-value=0.00016  Score=35.94  Aligned_cols=23  Identities=26%  Similarity=0.722  Sum_probs=9.8

Q ss_pred             cccccccccCCChhHHHHHHHhh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      |+|..|++.|.+..+|==|++.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            44444444444444444444444

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00031  Score=31.52  Aligned_cols=28  Identities=29%  Similarity=0.762  Sum_probs=19.1

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcC
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +..|.|..|...|.....|+.|+.+|.+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            3556777777777777777777776664

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00021  Score=35.15  Aligned_cols=27  Identities=26%  Similarity=0.749  Sum_probs=18.3

Q ss_pred             CCCCccc--ccccccCCChhHHHHHHHhh
Q psy12834        200 GERPYQC--DICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       200 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h  226 (275)
                      .++||.|  +.|+..|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3667777  44777777777777776655

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00027  Score=31.45  Aligned_cols=24  Identities=46%  Similarity=1.013  Sum_probs=11.7

Q ss_pred             cCCcccccccChhHHHHHHhhccC
Q psy12834        100 ICRVCGKSFVRKAEVKDHERTHTG  123 (275)
Q Consensus       100 ~C~~C~~~f~~~~~l~~H~~~~~~  123 (275)
                      .|..|++.|...+.|.+|+..|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            344455555545555555544443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.97  E-value=0.00012  Score=33.96  Aligned_cols=24  Identities=25%  Similarity=0.326  Sum_probs=19.5

Q ss_pred             ceeCcccchhhhhhhHHHhhhccc
Q psy12834        231 PYVCEVRLAVFYYVTCLFNMIQPK  254 (275)
Q Consensus       231 ~~~C~~C~~~~~~~~~~~~H~~~~  254 (275)
                      ||.|++|++.|..++-|..|.|+-
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKl   24 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKI   24 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CcccccccchhhHHHHHHHHHHHH
Confidence            688888888888888888888743

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.93  E-value=0.00019  Score=33.23  Aligned_cols=27  Identities=48%  Similarity=0.946  Sum_probs=15.6

Q ss_pred             CCCCCCChhhccChhhHHHHHHhhcCC
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHIKAAHTG  200 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  200 (275)
                      ||.|.+|++.|+....|.+|....|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            455666666666666666665555544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=0.00036  Score=30.54  Aligned_cols=23  Identities=43%  Similarity=0.690  Sum_probs=10.8

Q ss_pred             cCcchhhcCChHHHHHHHHhhcC
Q psy12834         73 CTECGKAFGTLRNLEVHLAVHTG   95 (275)
Q Consensus        73 C~~C~~~f~~~~~l~~H~~~~~~   95 (275)
                      |+.|.+.|.++.-|+.|-+.|++
T Consensus         3 cp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             CcchHHHHHHhHhhhhccccccC
Confidence            44444444444444444444444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.0004  Score=31.35  Aligned_cols=24  Identities=29%  Similarity=0.766  Sum_probs=13.7

Q ss_pred             CCcccccccccCCChhHHHHHHHh
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      +||+|..|.+.....++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            355666666555556666666543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.82  E-value=0.0004  Score=31.30  Aligned_cols=28  Identities=36%  Similarity=0.839  Sum_probs=21.6

Q ss_pred             CCccccc--ccccCCChhHHHHHHHhhcCC
Q psy12834        202 RPYQCDI--CNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       202 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      +||.|..  |.+.|.+...|.+|...|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677755  888888888888888888765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.81  E-value=0.00064  Score=30.45  Aligned_cols=25  Identities=40%  Similarity=0.716  Sum_probs=16.9

Q ss_pred             Cceeccc--ccccccCHHHHHHHHHhh
Q psy12834         12 RPYECKT--CKKTFVSKYTYKAHLVTH   36 (275)
Q Consensus        12 ~~~~C~~--C~~~f~~~~~l~~H~~~~   36 (275)
                      .||.|+.  |++.|..++.|+.|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677764  777777777777776654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.81  E-value=0.00018  Score=30.99  Aligned_cols=21  Identities=24%  Similarity=0.354  Sum_probs=16.4

Q ss_pred             ceeCcccchhhhhhhHHHhhh
Q psy12834        231 PYVCEVRLAVFYYVTCLFNMI  251 (275)
Q Consensus       231 ~~~C~~C~~~~~~~~~~~~H~  251 (275)
                      ||+|.-|...|..+.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            677777888887777777776

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00043  Score=30.65  Aligned_cols=25  Identities=24%  Similarity=0.688  Sum_probs=18.1

Q ss_pred             CCCCCChhhccChhhHHHHHHhhcC
Q psy12834        175 YPCTSCPKAFKRRRLLDYHIKAAHT  199 (275)
Q Consensus       175 ~~C~~C~~~f~~~~~l~~H~~~~H~  199 (275)
                      |+||.|+......++|+.|++..|+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            6677777777777777777776553

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00048  Score=31.07  Aligned_cols=28  Identities=25%  Similarity=0.471  Sum_probs=25.2

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCC
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTG  200 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  200 (275)
                      +||+|.+|.......++|..|++..|..
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5899999999999999999999987753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00065  Score=33.80  Aligned_cols=26  Identities=35%  Similarity=1.018  Sum_probs=21.4

Q ss_pred             CCCCcccccccccCCChhHHHHHHHh
Q psy12834        200 GERPYQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       200 ~~~~~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      +-+||.|..|++.|....++..|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            56788899999999888888888654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.47  E-value=0.00077  Score=28.93  Aligned_cols=22  Identities=27%  Similarity=0.812  Sum_probs=19.1

Q ss_pred             CcccccccccCCChhHHHHHHH
Q psy12834        203 PYQCDICNATFIYPEHFKKHRR  224 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~  224 (275)
                      ||+|..|...|..+..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999999999988874

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.003  Score=30.95  Aligned_cols=27  Identities=22%  Similarity=0.586  Sum_probs=21.1

Q ss_pred             CCceec--ccccccccCHHHHHHHHHhhc
Q psy12834         11 ARPYEC--KTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        11 ~~~~~C--~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            678888  558888888888888877665

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.10  E-value=0.0014  Score=28.22  Aligned_cols=24  Identities=42%  Similarity=0.883  Sum_probs=14.7

Q ss_pred             CCCCCChhhccChhhHHHHHHhhc
Q psy12834        175 YPCTSCPKAFKRRRLLDYHIKAAH  198 (275)
Q Consensus       175 ~~C~~C~~~f~~~~~l~~H~~~~H  198 (275)
                      |.|+.|-+.|.....+..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            456666666666666666665444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0033  Score=27.84  Aligned_cols=25  Identities=28%  Similarity=0.515  Sum_probs=18.4

Q ss_pred             ceecccccccccCHHHHHHHHHhhc
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      |-+|+.|+....++..|+.|-++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4567777777777777777777664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0014  Score=30.26  Aligned_cols=28  Identities=32%  Similarity=0.562  Sum_probs=23.0

Q ss_pred             CCCCCCC--ChhhccChhhHHHHHHhhcCC
Q psy12834        173 KRYPCTS--CPKAFKRRRLLDYHIKAAHTG  200 (275)
Q Consensus       173 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  200 (275)
                      +||.|.+  |.++|++.++-..|...-|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5899977  999999999999997445653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.76  E-value=0.0046  Score=27.16  Aligned_cols=23  Identities=30%  Similarity=0.687  Sum_probs=17.2

Q ss_pred             ceecccccccccCHHHHHHHHHh
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVT   35 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~   35 (275)
                      ||+|+.||+.|..+..|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57788888888888777777643

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.76  E-value=0.0029  Score=27.83  Aligned_cols=21  Identities=29%  Similarity=0.575  Sum_probs=12.0

Q ss_pred             CCCCCCChhhccChhhHHHHH
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHI  194 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~  194 (275)
                      ||+|..||+.|-....|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            455666666655555555553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0039  Score=27.50  Aligned_cols=23  Identities=17%  Similarity=0.473  Sum_probs=19.9

Q ss_pred             CcccccccccCCChhHHHHHHHh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      .|+||.|+-....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999999999999999875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0043  Score=31.97  Aligned_cols=24  Identities=21%  Similarity=0.620  Sum_probs=18.9

Q ss_pred             CcccccccccCCChhHHHHHHHhh
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h  226 (275)
                      .|.|..|++.|.+...|++|.-.|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            477888888888888888887666

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.42  E-value=0.0044  Score=28.91  Aligned_cols=24  Identities=29%  Similarity=0.509  Sum_probs=21.0

Q ss_pred             CCceecccccccccCHHHHHHHHH
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLV   34 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~   34 (275)
                      .-.|.|+.||.+|.+.+.|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            346899999999999999999885

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0082  Score=30.88  Aligned_cols=29  Identities=24%  Similarity=0.386  Sum_probs=23.6

Q ss_pred             CCCceecccccccccCHHHHHHHHHhhcC
Q psy12834         10 GARPYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      +...|.|..|++.|.....|+.|...|-.
T Consensus         3 E~~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           3 EAGILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ccceeeccccccccCCHHHHhHhHHhcCc
Confidence            34568899999999999999999887753

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.18  E-value=0.0046  Score=27.73  Aligned_cols=16  Identities=38%  Similarity=0.671  Sum_probs=6.1

Q ss_pred             chhhcCChHHHHHHHH
Q psy12834         76 CGKAFGTLRNLEVHLA   91 (275)
Q Consensus        76 C~~~f~~~~~l~~H~~   91 (275)
                      |.+.|.+...|.+|..
T Consensus        10 c~kgf~tlhhltrhs~   25 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSL   25 (30)
T ss_dssp             CCCEESSTTHHHHHHH
T ss_pred             ccccchhhhhhhhhhc
Confidence            3333333333333333

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.0079  Score=28.74  Aligned_cols=24  Identities=33%  Similarity=0.355  Sum_probs=18.2

Q ss_pred             cccccccCCChhHHHHHHHhhcCC
Q psy12834        206 CDICNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       206 C~~C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      |+.=++.|...-.|..|+++|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            455566788888888888888875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.84  E-value=0.011  Score=25.36  Aligned_cols=22  Identities=27%  Similarity=0.715  Sum_probs=18.8

Q ss_pred             cccccccccCCChhHHHHHHHh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      |.|+.|-+.|+.+.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7789999999999888888865

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.021  Score=25.50  Aligned_cols=21  Identities=33%  Similarity=0.888  Sum_probs=11.1

Q ss_pred             cccCcchhhcCChHHHHHHHH
Q psy12834         71 FVCTECGKAFGTLRNLEVHLA   91 (275)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~   91 (275)
                      |.|..|++...+...++.|..
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            455555555555555555543

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.18  E-value=0.014  Score=27.19  Aligned_cols=21  Identities=33%  Similarity=0.656  Sum_probs=13.4

Q ss_pred             CCCCCCChhhccChhhHHHHH
Q psy12834        174 RYPCTSCPKAFKRRRLLDYHI  194 (275)
Q Consensus       174 ~~~C~~C~~~f~~~~~l~~H~  194 (275)
                      .|.|+-||-.|++.+.|..|.
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            356666666666666666664

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.017  Score=25.57  Aligned_cols=18  Identities=28%  Similarity=0.530  Sum_probs=11.6

Q ss_pred             ccccCCChhHHHHHHHhh
Q psy12834        209 CNATFIYPEHFKKHRRIH  226 (275)
Q Consensus       209 C~~~f~~~~~l~~H~~~h  226 (275)
                      |++.|.+.++++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            666666666666666555

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.82  E-value=0.024  Score=25.78  Aligned_cols=27  Identities=33%  Similarity=0.640  Sum_probs=16.4

Q ss_pred             Cccccc--ccccCCChhHHHHHHHhhcCC
Q psy12834        203 PYQCDI--CNATFIYPEHFKKHRRIHTGE  229 (275)
Q Consensus       203 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  229 (275)
                      .|.|..  |+..|.....|.-|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            455543  666666666666666666654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.30  E-value=0.01  Score=33.25  Aligned_cols=34  Identities=18%  Similarity=0.423  Sum_probs=15.0

Q ss_pred             cccccccccCCChhHHHHHHHhhcCCCceeCcccchh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRIHTGEKPYVCEVRLAV  240 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  240 (275)
                      |.||.|++.|+....+..   .-.....|.|.+|+..
T Consensus        15 y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          15 FKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             EECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             eECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            555555555544333322   1222234555555544

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.013  Score=32.84  Aligned_cols=43  Identities=19%  Similarity=0.457  Sum_probs=27.9

Q ss_pred             cccCCCCceecccccccccCHHHHHHHHHhhcCCCCCcccccchhhc
Q psy12834          6 VSHTGARPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSF   52 (275)
Q Consensus         6 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~C~~C~~~f   52 (275)
                      +.......|.||.|++.|.....++.  ....  ...|.|..|+-..
T Consensus         7 rd~~~~~~y~Cp~C~~~ys~Lda~~L--~d~~--~~~F~C~~C~~el   49 (62)
T d1vd4a_           7 RDSTNRASFKCPVCSSTFTDLEANQL--FDPM--TGTFRCTFCHTEV   49 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHHH--EETT--TTEEBCSSSCCBC
T ss_pred             hccccCCceECCCCCCCcchhhHHHh--cCcC--CCeEEecCCCCEE
Confidence            34455678999999999976655542  2222  3468899886543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.96  E-value=0.034  Score=26.11  Aligned_cols=26  Identities=23%  Similarity=0.567  Sum_probs=18.6

Q ss_pred             CcccccccccCCChhHHHHHHHhhcC
Q psy12834        203 PYQCDICNATFIYPEHFKKHRRIHTG  228 (275)
Q Consensus       203 ~~~C~~C~~~f~~~~~l~~H~~~h~~  228 (275)
                      .|.|..|++.|+....+..|....+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            36777777777777777777766554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.82  E-value=0.025  Score=26.68  Aligned_cols=28  Identities=18%  Similarity=0.523  Sum_probs=18.9

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcC
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHT  199 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~  199 (275)
                      +..|.|..|.+.+...+.+-+|+-+.|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            3456777777777777777777666554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.077  Score=23.62  Aligned_cols=21  Identities=19%  Similarity=0.403  Sum_probs=10.4

Q ss_pred             cccccccccCCChhHHHHHHH
Q psy12834        204 YQCDICNATFIYPEHFKKHRR  224 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~  224 (275)
                      |.|..|++...+...+.-|+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            445555555555555555443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.019  Score=31.71  Aligned_cols=26  Identities=27%  Similarity=0.649  Sum_probs=19.2

Q ss_pred             CCcccccccccCCChhHHHHHHHhhc
Q psy12834        202 RPYQCDICNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       202 ~~~~C~~C~~~f~~~~~l~~H~~~h~  227 (275)
                      ..|+|..|+..|.+...|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            34777777777777777777777774

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.07  Score=24.99  Aligned_cols=26  Identities=27%  Similarity=0.546  Sum_probs=19.1

Q ss_pred             ceecccccccccCHHHHHHHHHhhcC
Q psy12834         13 PYECKTCKKTFVSKYTYKAHLVTHTD   38 (275)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~H~~~~~~   38 (275)
                      .|.|..|++.|.....+..|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47777788888777777777766554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.90  E-value=0.075  Score=27.10  Aligned_cols=27  Identities=15%  Similarity=0.428  Sum_probs=18.3

Q ss_pred             CCCccCCcccccccChhHHHHHHhhcc
Q psy12834         96 NRPFICRVCGKSFVRKAEVKDHERTHT  122 (275)
Q Consensus        96 ~~~~~C~~C~~~f~~~~~l~~H~~~~~  122 (275)
                      +.|-.|++|+-......+|+.|+...+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            556677777777777777777766544

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.44  E-value=0.031  Score=27.42  Aligned_cols=27  Identities=37%  Similarity=0.626  Sum_probs=17.5

Q ss_pred             CCCCCCCCChhhccChhhHHHHHHhhcCCCCCccccccccc
Q psy12834        172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNAT  212 (275)
Q Consensus       172 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~  212 (275)
                      +.-|.|+.||.              .+.++.|-+||+|+..
T Consensus         3 ~~~~vC~vCGy--------------i~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGY--------------IHKGEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCC--------------EEESSCCSBCTTTCCB
T ss_pred             CCEEECCCCCC--------------EeeCCCCCcCCCCCCc
Confidence            44577888875              3444566778888743

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.11  E-value=0.029  Score=31.94  Aligned_cols=25  Identities=20%  Similarity=0.506  Sum_probs=19.5

Q ss_pred             CCceecccccccccCHHHHHHHHHh
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVT   35 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~   35 (275)
                      ...|-|..|++.|.+...|..|.++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            4557888888888888888888764

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.85  E-value=0.033  Score=27.52  Aligned_cols=26  Identities=35%  Similarity=0.749  Sum_probs=15.9

Q ss_pred             CCCCCCCChhhccChhhHHHHHHhhcCCCCCccccccccc
Q psy12834        173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNAT  212 (275)
Q Consensus       173 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~  212 (275)
                      ..|.|+.||..              +.++.|-.||+|+..
T Consensus         4 ~~~~C~vCG~i--------------~~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYT--------------AVDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCE--------------EESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCE--------------ecCCCCCcCCCCCCc
Confidence            44677777742              334556677777643

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.44  E-value=0.038  Score=31.46  Aligned_cols=22  Identities=32%  Similarity=0.537  Sum_probs=14.8

Q ss_pred             cccccccccCCChhHHHHHHHh
Q psy12834        204 YQCDICNATFIYPEHFKKHRRI  225 (275)
Q Consensus       204 ~~C~~C~~~f~~~~~l~~H~~~  225 (275)
                      |-|..|++.|.+...|..|.++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            6677777777777777776543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.99  E-value=0.11  Score=22.59  Aligned_cols=19  Identities=32%  Similarity=0.534  Sum_probs=10.5

Q ss_pred             ccccCCChhHHHHHHHhhc
Q psy12834        209 CNATFIYPEHFKKHRRIHT  227 (275)
Q Consensus       209 C~~~f~~~~~l~~H~~~h~  227 (275)
                      |++.|..-..|..|+.+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            5555555555555555543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.28  E-value=0.15  Score=23.92  Aligned_cols=28  Identities=29%  Similarity=0.702  Sum_probs=18.7

Q ss_pred             CCCceecccccccccCHHHHHHHHHhhc
Q psy12834         10 GARPYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      ++..|+|..|.+.|...+.+-.|..+-+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            3456777777777777777777765433

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.72  E-value=0.25  Score=25.11  Aligned_cols=28  Identities=21%  Similarity=0.510  Sum_probs=17.0

Q ss_pred             CCCCCCCCCChhhccChhhHHHHHHhhc
Q psy12834        171 NDKRYPCTSCPKAFKRRRLLDYHIKAAH  198 (275)
Q Consensus       171 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H  198 (275)
                      .+.|-.|++|+.....+..|++|+...|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3455566666666666666666665444

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.27  E-value=0.19  Score=23.81  Aligned_cols=22  Identities=23%  Similarity=0.443  Sum_probs=12.4

Q ss_pred             cccCcchhhcCChHHHHHHHHh
Q psy12834         71 FVCTECGKAFGTLRNLEVHLAV   92 (275)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~   92 (275)
                      ..|..|-++|.+..++++|+-.
T Consensus         4 ltclecmrtfkssfsiwrhqve   25 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVE   25 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHhhhe
Confidence            3455565666665566665543

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.84  E-value=0.18  Score=23.89  Aligned_cols=27  Identities=15%  Similarity=0.450  Sum_probs=19.4

Q ss_pred             CcccccchhhcccchHHHHHHhhhcCC
Q psy12834         42 PFSCEKCDKSFYTQQNLVQHEKTHSGS   68 (275)
Q Consensus        42 ~~~C~~C~~~f~~~~~l~~H~~~~~~~   68 (275)
                      ...|-+|-++|++.-++.+|+...++.
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheeccc
Confidence            456777777788777788887766554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=0.7  Score=25.28  Aligned_cols=27  Identities=30%  Similarity=0.631  Sum_probs=19.3

Q ss_pred             CCceecccccccccCHHHHHHHHHhhc
Q psy12834         11 ARPYECKTCKKTFVSKYTYKAHLVTHT   37 (275)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~H~~~~~   37 (275)
                      ...|.|..|+..|.+...|..|+..|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhcc
Confidence            456777777777777777777776654

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.41  E-value=0.55  Score=19.96  Aligned_cols=20  Identities=25%  Similarity=0.380  Sum_probs=15.2

Q ss_pred             ecccccccccCHHHHHHHHH
Q psy12834         15 ECKTCKKTFVSKYTYKAHLV   34 (275)
Q Consensus        15 ~C~~C~~~f~~~~~l~~H~~   34 (275)
                      .||.|.-+|.++..-+.|..
T Consensus         2 vcpycslrf~sp~lk~ehe~   21 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHES   21 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHHH
T ss_pred             CCCcceeeeCCHHHhhHhhh
Confidence            58999999988876666653

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.25  E-value=0.65  Score=22.00  Aligned_cols=22  Identities=18%  Similarity=0.483  Sum_probs=12.1

Q ss_pred             ccCcchhhcCChHHHHHHHHhh
Q psy12834         72 VCTECGKAFGTLRNLEVHLAVH   93 (275)
Q Consensus        72 ~C~~C~~~f~~~~~l~~H~~~~   93 (275)
                      -|..|+-.|.+...+..|.+..
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk~Y   31 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHHT
T ss_pred             HHhhCCceehhHHHHHHHHHhc
Confidence            3555555555555555555444

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.10  E-value=0.7  Score=20.33  Aligned_cols=20  Identities=35%  Similarity=0.675  Sum_probs=12.5

Q ss_pred             CChhhccChhhHHHHHHhhc
Q psy12834        179 SCPKAFKRRRLLDYHIKAAH  198 (275)
Q Consensus       179 ~C~~~f~~~~~l~~H~~~~H  198 (275)
                      -||+.|++..-|..|.+-.|
T Consensus         7 gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTCCEESSHHHHHHHHHHGG
T ss_pred             CchhhhccHHHHHhHHHHHH
Confidence            47777777777766655333