Psyllid ID: psy13090

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-
Protein Sequence
MHCFQFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKTH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccHHHccccccHHHHHHccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHccccccccccccccccccccccHHHHHccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccHHHccccccccccccccccccccccHHHHHHHccccccccccccccccccccccHHHHHHcccccccccccccccccccccHHHHHHHcccccccccccccccccccccccHHHHHHcccccccccccccccccccccccHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccccccccHccccEEEcccccccccccccccEccccHHHHHHHHcccccccEcccccccEccccccEEEEcccccccccccccccEccccHHHHHHHHccccccccccHccccEcccccHHHEHcccccEEccccccccccHcccccEEcccccEEEEEEEccccccccccHccccEccccHHHHHHHcHcccccccccccHccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccHccccEccccHHHHHHHHcccccccccccccccEcccccHEEEccccccccccccccccEccccHHHHHHHHccccccccccccccccccccccccHHccHHHHHHHHHHHHHcccccccccccccccEccccHHHEccccccccccccccccEccccHHHHHHHHcccccccccccccccccccHccccEcccccHHEEEEEEcccccccccccccccEccccHHHHHHHHHccccccccccHccccEccccHHHHHHHHcccccccccEEEccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHHccccccEEccccccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHccccccccccHccccEcccccHHEHEHEccccccccccccccccEccccHHHHHHHHcccccccEcccccccEccccccEEEEEccccccc
Coil and Loop (DISEMBL)
mhcfqfessnlndLMYHCRacvamprihphkdkfmcYACYYSTYISTnmknhimthtgskpyncshctfkgassQALKYHMHVDMLQYLygasfdrfphlsnddddddddgddgdvkFDVCNGIINKIEntcsehndriFYANikrehldpddcpkykmtresgIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHlqntvtysckkcpfetqfkvtlgdhyktchkgisftcdechlcfntfrrfdshiraheYTEQCELcnekvigkNQIYFHYYhehegydfnckqcsfttktpkkfiehkeaghftwncehcdfsaskKSVLLSHLKQHVTRVtrtqhmtpdeetneipiepdlspdlqkEELVRETRSMkmydnykcnicdcffKTHSILEDHMKAlhsfpcdkcdyvggnlSMLTShqnshnsqtevppilsknkrqcEYCSQLFRRASAVEKHIALkhtgdkpyscylceekFENSESLRTHMNSLHAllfpyscnicfrrnskythlSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHkhaldnhmplhsldrkhqcpvclrrfsrqsdnnthqrrvhgvlkptplemqvEKRDQVALRMkpsafemqsesqltCDICDRVFQTDKQwklhmgfhntkrrlpcklcgfrlknhkqlklhqryhlssnlfrcekcnlgysrkdsfeyhmtshnqkeqtfmctqcdftssskdtlnTHAMVHADElkfscqncdfkcsklsCVRNVISQVAQKTH
Flexible Loop (DISEMBL)
MHCFQFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINkientcsehnDRIFYANikrehldpddcpkyKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVtrvtrtqhmtpdeetneipiepdlspdlqKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALkhtgdkpyscYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRfsrqsdnnthqrrvhgvlkptplemqVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLhmgfhntkrrlpCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKTH
Low Complexity Region (SEG)
MHCFQFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSNddddddddgddgdVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKTH
Disordered region (IsUnstruct)
****QFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRF*******************KFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVT**************************************MKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSML*********************RQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRF************************************************LTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHN*KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVIS*******
Disordered Region (DISOPRED)
MHCFQFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQV***T*
Disordered Region (DISEMBL)
MHCFQFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSND********DDGDVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLT************PPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKTH
Disordered Region (DISPRO)
MHCFQFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQV*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHCFQFESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKTH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	771	2.2.26 [Sep-21-2011]
Q5MCW4	686	Zinc finger protein 569 O	yes	N/A	0.609	0.685	0.263	2e-34
P10076	861	Zinc finger protein 26 OS	no	N/A	0.632	0.566	0.234	6e-33
Q14591	655	Zinc finger protein 271 O	no	N/A	0.638	0.751	0.261	7e-33
O43345	1167	Zinc finger protein 208 O	no	N/A	0.887	0.586	0.229	1e-32
Q80W31	679	Zinc finger protein 569 O	no	N/A	0.609	0.692	0.258	2e-32
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.866	0.569	0.231	3e-32
Q6ZNG1	722	Zinc finger protein 600 O	no	N/A	0.622	0.664	0.268	4e-32
Q5R5U3	672	Zinc finger protein 271 O	no	N/A	0.638	0.732	0.263	5e-32
Q05481	1191	Zinc finger protein 91 OS	no	N/A	0.894	0.579	0.233	2e-31
Q6ZNA1	936	Zinc finger protein 836 O	no	N/A	0.863	0.711	0.237	2e-31

>sp|Q5MCW4|ZN569_HUMAN Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=2 SV=1

 Score =  147 bits (372), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 207/527 (39%), Gaps = 57/527 (10%)

Query: 237 FTCDECHLCFNTFRRFDSHIRAH--EYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCK 294
           F C+ C   FN       H+R H  E   +C  C +    K ++  HY        + C 
Sbjct: 186 FKCNHCGKGFNQTLDLIRHLRIHTGEKPYECSNCRKAFSHKEKLIKHYKIHSREQSYKCN 245

Query: 295 QCSFTTKTPKKFIEHKE--AGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPD 352
           +C          I H+    G   + C+ C+ S S+KS L+ H K H             
Sbjct: 246 ECGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEKIH------------- 292

Query: 353 EETNEIPIEPDLSPDL--QKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMK---A 407
             T E P E +       QK+ L+   +       Y CN C   F   + L  HM+    
Sbjct: 293 --TGEKPYECNECGKAFSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTG 350

Query: 408 LHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHI 467
              + CDKC       SML  H   H  +            +C  C + F ++SA+  H+
Sbjct: 351 EKPYKCDKCGKAFSQFSMLIIHVRIHTGEKPY---------ECNECGKAFSQSSALTVHM 401

Query: 468 ALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLL 527
              HTG+KPY C  C + F + ++  TH   +H    PY CN C +   + ++L RH+  
Sbjct: 402 R-SHTGEKPYECKECRKAFSHKKNFITHQK-IHTREKPYECNECGKAFIQMSNLVRHQ-- 457

Query: 528 VHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQS 586
                      +  GEK Y C +C      K  L  H  +HS ++ ++C  C + FS++ 
Sbjct: 458 ----------RIHTGEKPYICKECGKAFSQKSNLIAHEKIHSGEKPYECNECGKAFSQKQ 507

Query: 587 DNNTHQRRVHGVLKPTPLEMQVEKRDQVA---LRMKPSAFEMQSESQLTCDICDRVFQTD 643
           +  THQ+ VH   KP       +   Q+A   L ++    E   E    CD C + F   
Sbjct: 508 NFITHQK-VHTGEKPYDCNECGKAFSQIASLTLHLRSHTGEKPYE----CDKCGKAFSQC 562

Query: 644 KQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFE 703
               LHM  H  ++   C  CG        L +H R H     + C KC   +S+  S  
Sbjct: 563 SLLNLHMRSHTGEKPYVCNECGKAFSQRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLT 622

Query: 704 YHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD 750
            H+  H   E+ F C++C    S   +L  H   H  E  + C  C 
Sbjct: 623 IHIRGHT-GEKPFDCSKCGKAFSQISSLTLHMRKHTGEKPYHCIECG 668

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  143 bits (360), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 128/547 (23%), Positives = 207/547 (37%), Gaps = 59/547 (10%)

Query: 237 FTCDECHLCFNTFRRFDSHIRAH--EYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCK 294
           + C +C   F      + H+++H  E    C+ C +    ++ +  H         + CK
Sbjct: 246 YECKKCEKFFTHPVYLNIHMQSHTVEKPYDCKECGKAFTERSSLIVHLRQHTREKSYECK 305

Query: 295 QCSFTTKTPKKFIEHKEA--GHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPD 352
           +C  T   P +  EH  +  G   + C+ C  + +  S L +HL+ H             
Sbjct: 306 ECGKTFIQPSRLTEHMRSHTGEKPYQCDQCGNAFASSSYLTTHLRTH------------- 352

Query: 353 EETNEIPIEPDLSPDL--QKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMK---A 407
             T E P E ++      +   L+   R+      Y+C +C   F   S L  H++    
Sbjct: 353 --TGEKPFECNICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTG 410

Query: 408 LHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHI 467
              +PC +C+    + + LT H  +H  +            +C+ C++ FR +S ++ H 
Sbjct: 411 ERPYPCTECEKAFTSFAQLTEHIKTHTGEKPF---------RCKVCARTFRNSSCLKTHF 461

Query: 468 ALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRH--- 524
            + HTG KPY C  C + F     L  H+  +H    PY C  C +  S  + L  H   
Sbjct: 462 RI-HTGIKPYKCNYCGKAFTARSGLTKHV-LIHNGEKPYECKECGKAFSTSSGLVEHIRI 519

Query: 525 -------------KLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLD 570
                        K L H   + G      GEK + C QC         L  HM  H+ +
Sbjct: 520 HTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTGE 579

Query: 571 RKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEM-QSES 629
           + ++C  C + F  +S    H R   G     P E +   +  ++        +   SE 
Sbjct: 580 KPYECKECGKTFPERSCLTKHIRTHTG---ERPYECKECGKGFISFAQLTVHIKTHSSER 636

Query: 630 QLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRC 689
              C +C + F+     + H   H   +   C  CG        L +H R H     + C
Sbjct: 637 PFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSYAC 696

Query: 690 EKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC 749
           ++C   +S       H+ SH + E+ F C  C    +S   LN H  +H  E  F C  C
Sbjct: 697 QECGKAFSTSSGLIAHIRSH-KGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTVC 755

Query: 750 D--FKCS 754
              F CS
Sbjct: 756 GKTFTCS 762

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q14591|ZN271_HUMAN Zinc finger protein 271 OS=Homo sapiens GN=ZNF271 PE=2 SV=4

 Score =  142 bits (359), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 211/543 (38%), Gaps = 51/543 (9%)

Query: 209 YSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAH--EYTEQCE 266
           YSC  C     +   L  H +       + CDEC   F+       H R H  E   QC 
Sbjct: 118 YSCNWCIKSFSWSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHIGEKPYQCR 177

Query: 267 LCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKE--AGHFTWNCEHCDF 324
            C++    ++ +  H         + C QC+         I+H+    G   + C+ C  
Sbjct: 178 HCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKHQRIHTGEKPYKCDVCGK 237

Query: 325 SASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDL--QKEELVRETRSMKM 382
           + S+ S L+ H + H               T E P   +       Q  +L++  R    
Sbjct: 238 AFSQSSDLILHQRIH---------------TGEKPYPCNQCSKSFSQNSDLIKHRRIHTG 282

Query: 383 YDNYKCNICDCFFKTHSILEDHMK---ALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEV 439
              YKCN C   F   S+L  H +       +PCD+C      LS L +HQ  H  +   
Sbjct: 283 EKPYKCNECGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHTGEKPY 342

Query: 440 PPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSL 499
           P         C  C+++F R S + KH  + HTG+KPY C  C + F  S +L  H   +
Sbjct: 343 P---------CNQCNKMFSRRSDLVKHHRI-HTGEKPYECDECGKTFSQSSNLILHQR-I 391

Query: 500 HALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKH 558
           H    PY+C+ C +  S+     R  L+ HQ+       +  GEK Y+C QC        
Sbjct: 392 HTGEKPYACSDCTKSFSR-----RSDLVKHQR-------IHTGEKPYACNQCDKSFSQSS 439

Query: 559 ALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRM 618
            L  H  +HS ++ + C  C + FS+ SD   HQR +H   K        +   Q++  +
Sbjct: 440 DLTKHQRVHSGEKPYHCNSCEKAFSQSSDLILHQR-IHTGEKYYLCTQCSKSFSQISDLI 498

Query: 619 KPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQ 678
           K        E    C  C + F       LH   H  K+  PC  CG        L  HQ
Sbjct: 499 KHQRIHT-GEKPYKCSECRKAFSQCSALTLHQRIHTGKKPNPCDECGKSFSRRSDLINHQ 557

Query: 679 RYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVH 738
           + H     ++C+ C   +S       H  +H + E+ + C QC  + S    L  H  VH
Sbjct: 558 KIHTGEKPYKCDACGKAFSTCTDLIEHQKTHAE-EKPYQCVQCSRSCSQLSELTIHEEVH 616

Query: 739 ADE 741
             E
Sbjct: 617 CGE 619

May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.

Homo sapiens (taxid: 9606)

>sp|O43345|ZN208_HUMAN Zinc finger protein 208 OS=Homo sapiens GN=ZNF208 PE=2 SV=1

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 176/768 (22%), Positives = 286/768 (37%), Gaps = 84/768 (10%)

Query: 27   IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDML 86
            IH  +  + C  C  +   S+N+  H   HTG  PY C  C    + S  L YH  +  +
Sbjct: 418  IHTGEKPYKCEECGKAFNWSSNLMEHKKIHTGETPYKCEECGKGFSWSSTLSYHKKIHTV 477

Query: 87   QYLY-----GASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFY 141
            +  Y     G +F++   L         +      K + C    +K+ +T + H  +  +
Sbjct: 478  EKPYKCEECGKAFNQSAILIKHKRIHTGEKP---YKCEECGKTFSKV-STLTTH--KAIH 531

Query: 142  ANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAED-LKCKLCNYQAVNIKGIRAHVFR 200
            A  K     P  C +   T      L     ++  E   KCK C         +  H   
Sbjct: 532  AGEK-----PYKCKECGKTFIKVSTLTTHKAIHAGEKPYKCKECGKAFSKFSILTKHKVI 586

Query: 201  KHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKG-ISFTCDECHLCFNTFRRFDSH--IR 257
               +    Y C++C     +   L +H K  H G   + C+EC   F+TF     H  I 
Sbjct: 587  HTGEKP--YKCEECGKAFNWSSNLMEH-KRIHTGEKPYKCEECGKSFSTFSVLTKHKVIH 643

Query: 258  AHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKE--AGHF 315
              E   +CE C +     + + +H         + C++C          I+HK       
Sbjct: 644  TGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKAFNRSAILIKHKRIHTDEK 703

Query: 316  TWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIE-PDLSPDLQKEELV 374
             + CE C  + SK S L +H   H                 E P +  +      K  ++
Sbjct: 704  PYKCEECGKTFSKVSTLTTHKAIHA---------------GEKPYKCKECGKAFSKFSIL 748

Query: 375  RETRSMKMYDN-YKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSH 429
             + + +   +  YKC  C   +K  S L  H K +H+    + C++C       S+LT H
Sbjct: 749  TKHKVIHTGEKPYKCEECGKAYKWPSTLSYH-KKIHTGEKPYKCEECGKGFSMFSILTKH 807

Query: 430  QNSHNSQTEVP-----------PILSKNKR--------QCEYCSQLFRRASAVEKHIALK 470
            +  H  +                + SK+K+        +CE C + +   S + KH  + 
Sbjct: 808  EVIHTGEKPYKCEECGKAFSWLSVFSKHKKTHAGEKFYKCEACGKAYNTFSILTKHKVI- 866

Query: 471  HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQ 530
            HTG+KPY C  C + F  S +L  H   +H    PY C  C +  S  + L+ HK     
Sbjct: 867  HTGEKPYKCEECGKAFNWSSNLMEH-KKIHTGETPYKCEECDKAFSWPSSLTEHK----- 920

Query: 531  KQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNN 589
                   +   GEK Y C +C         L  H   H+ +  ++C  C + F+  S+  
Sbjct: 921  -------ATHAGEKPYKCEECGKAFSWPSRLTEHKATHAGEEPYKCEECGKAFNWSSNLM 973

Query: 590  THQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLH 649
             H +R+H   KP   E   +     ++  K        E    C+ C + ++       H
Sbjct: 974  EH-KRIHTGEKPYKCEECGKSFSTFSILTKHKVIHT-GEKPYKCEECGKAYKWSSTLSYH 1031

Query: 650  MGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH 709
               H  ++   C+ CG        L  H+  H    L++CE+C   Y    +  YH   H
Sbjct: 1032 KKIHTVEKPYKCEECGKGFVMFSILAKHKVIHTGEKLYKCEECGKAYKWPSTLRYHKKIH 1091

Query: 710  NQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLS 757
               E+ + C +C    S+   L  H ++H  E  + C+ C    S LS
Sbjct: 1092 TG-EKPYKCEECGKAFSTFSILTKHKVIHTGEKPYKCEECGKAFSWLS 1138

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q80W31|ZN569_MOUSE Zinc finger protein 569 OS=Mus musculus GN=Znf569 PE=2 SV=2

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 205/527 (38%), Gaps = 57/527 (10%)

Query: 237 FTCDECHLCFNTFRRFDSHIRAHEYTE--QCELCNEKVIGKNQIYFHYYHEHEGYDFNCK 294
           F C+ C   F+       H+R H   +  +C  C +    K ++  H+        + C 
Sbjct: 179 FKCNHCGKGFSQTLDLIRHLRVHTGGKLYECHQCGKGFSHKEKLINHHKLHSREQCYECS 238

Query: 295 QCSFTTKTPKKFIEHKE--AGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPD 352
           +C  T       I H+    G   + C+ C  S  +KS L+ H K H             
Sbjct: 239 ECGKTFIKMSNLIRHQRIHTGEKPYVCQECGKSFGQKSNLIDHEKIH------------- 285

Query: 353 EETNEIPIEPDLSPDL--QKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKA--- 407
             T E P + +       QK+ LV   +       Y CN C   F   + L  HM+    
Sbjct: 286 --TGEKPYKCNECGKSFSQKQSLVAHQKVHTGEKPYACNECGKAFPRVASLALHMRGHTG 343

Query: 408 LHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHI 467
              + CDKC       SML  H   H  +            +C  C + F ++SA+  HI
Sbjct: 344 EKPYKCDKCGKAFSQFSMLIIHVRVHTGEKPY---------ECGECGKAFSQSSALTVHI 394

Query: 468 ALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLL 527
              HTG+KPY C  C + F + ++  TH   +H    PY CN C +   + ++L RH+  
Sbjct: 395 R-SHTGEKPYECKECRKSFSHKKNFITHQK-IHTREKPYGCNECGKAFIQMSNLVRHQ-- 450

Query: 528 VHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQS 586
                      +  GEK Y C +C      K  L  H  +HS ++ ++C  C + FS++ 
Sbjct: 451 ----------RIHTGEKPYLCKECGKAFSQKSNLIAHEKIHSGEKPYECNECGKAFSQKQ 500

Query: 587 DNNTHQRRVHGVLKPTPLEMQVEKRDQVA---LRMKPSAFEMQSESQLTCDICDRVFQTD 643
           +  THQ+ VH   KP       +   Q+A   L ++    E   E    C+ C + F   
Sbjct: 501 NFITHQK-VHTGEKPYDCNKCGKAFSQIASLTLHLRSHTGEKPYE----CEKCGKAFSQC 555

Query: 644 KQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFE 703
               LHM  H  ++   C  CG        L +H R H     + C KC   +S+  S  
Sbjct: 556 SLLNLHMRSHTGEKPYVCNECGKAFSQRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLT 615

Query: 704 YHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD 750
            H+  H   E+ F C+ C    S   +L  H   H  E  + C  C 
Sbjct: 616 IHIRGHT-GEKPFDCSNCGKAFSQISSLTLHMRKHTGEKPYVCIECG 661

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  140 bits (354), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 172/742 (23%), Positives = 276/742 (37%), Gaps = 74/742 (9%)

Query: 27   IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC--TFKGASSQALKYHMHVD 84
            IH  K  + C  C  +   S+ +  H + HTG KPY C  C   F+ +S       +H  
Sbjct: 425  IHTGKKPYKCEECGKAFNSSSTLMKHKIIHTGEKPYKCEECGKAFRQSSHLTRHKAIHTG 484

Query: 85   MLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANI 144
               Y        F H S+              K + C    +    + +  N +I +   
Sbjct: 485  EKPYKCEECGKAFNHFSDLRRHKIIHTGKKPYKCEECGKAFS---QSSTLRNHQIIHTGE 541

Query: 145  KREHLDPDDCPKYKMTRESGIKLNIKYDMNEAED-LKCKLCNYQAVNIKGIRAHVFRKHL 203
            K     P  C +     +   KL +   ++  E   KC+ C     +   +R H    H 
Sbjct: 542  K-----PYKCEECGKAFKWSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKHKVI-HT 595

Query: 204  QNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSH--IRAHE 260
            +  + Y C++C         L  H K  H G   + C+EC   F        H  I   E
Sbjct: 596  REKL-YKCEECGKAFNNSSILAKH-KIIHTGKKPYKCEECGKAFRQSSHLTRHKAIHTGE 653

Query: 261  YTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHK--EAGHFTWN 318
               +CE C +     + +  H         + C++C            HK    G   + 
Sbjct: 654  KPYKCEECGKAFSHFSALRRHKIIHTGKKPYKCEECGKAFSHFSALRRHKIIHTGEKPYK 713

Query: 319  CEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIE-PDLSPDLQKEELVRET 377
            CE C  +    S L  H   H               T E P +  +     +    +R+ 
Sbjct: 714  CEECGKAFKWSSKLTVHKVIH---------------TAEKPCKCEECGKSFKHFSALRKH 758

Query: 378  RSMKMYDN-YKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNS 432
            + +   +  YKC  C   F + S L  H K +H+    + C++C       S LT H+  
Sbjct: 759  KVIHTREKLYKCEECVKAFNSFSALMKH-KVIHTGEKPYKCEECGKAFKWSSKLTVHKVI 817

Query: 433  HNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESL 492
            H  +            +CE C + F+  SA+ KH  + HTG+KPY C  C + F  S  L
Sbjct: 818  HTGEKPC---------KCEECGKAFKHFSALRKHKII-HTGEKPYKCEECGKAFHQSSKL 867

Query: 493  RTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCS 551
              H   +H    PY C  C +  ++ +HL+ HK+            +  G+K Y C +C 
Sbjct: 868  AKH-KKIHTGEKPYKCEECGKAFNRLSHLTTHKI------------IHTGKKPYKCEECG 914

Query: 552  YQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKR 611
                    L  H  +H+ ++ ++C  C R FS QS   T  + +H   KP   E +  K 
Sbjct: 915  KAFNQSANLTTHKRIHTGEKPYKCEECGRAFS-QSSTLTAHKIIHAGEKPYKCE-ECGKA 972

Query: 612  DQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNH 671
               +  +         E    C+ C + F        H   H+ ++   C+ CG   K  
Sbjct: 973  FSQSSTLTTHKIIHTGEKFYKCEECGKAFSQLSHLTTHKRIHSGEKPYKCEECGKAFKQS 1032

Query: 672  KQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQ---KEQTFMCTQCDFTSSSK 728
              L  H+R H     ++CE C+  +SR      H+T+H +    E+ + C +C    +  
Sbjct: 1033 STLTTHKRIHAGEKFYKCEVCSKAFSRFS----HLTTHKRIHTGEKPYKCEECGKAFNLS 1088

Query: 729  DTLNTHAMVHADELKFSCQNCD 750
              L TH ++H  E  + C+ C 
Sbjct: 1089 SQLTTHKIIHTGEKPYKCEECG 1110

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZNG1|ZN600_HUMAN Zinc finger protein 600 OS=Homo sapiens GN=ZNF600 PE=1 SV=2

 Score =  140 bits (352), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 215/544 (39%), Gaps = 64/544 (11%)

Query: 231 CHKG-ISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNE--KVIGKNQIYFHYYHEHE 287
           CH G   + C+EC   F+       H R H   +    CNE  K+ G+N     +   H 
Sbjct: 211 CHTGEKPYKCNECGKSFSQVSSLTCHRRLHTAVKS-HKCNECGKIFGQNSALVIHKAIHT 269

Query: 288 GYD-FNCKQCSFTTKTPKKFIEHKE--AGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVT 344
           G   + C +C            H+    G   + CE CD   S+KS L SH + H     
Sbjct: 270 GEKPYKCNECDKAFNQQSNLARHRRIHTGEKPYKCEECDKVFSRKSTLESHKRIH----- 324

Query: 345 RTQHMTPDEETNEIPIEPDL--SPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILE 402
                     T E P +  +  +      +L R  R       YKCN C   F   S L 
Sbjct: 325 ----------TGEKPYKCKVCDTAFTWNSQLARHKRIHTGEKTYKCNECGKTFSHKSSLV 374

Query: 403 DHMKALH----SFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFR 458
            H + LH    S+ C  CD      S L  H   H+              +C  C + F 
Sbjct: 375 CHHR-LHGGEKSYKCKVCDKAFAWNSHLVRHTRIHSGGKPY---------KCNECGKTFG 424

Query: 459 RASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKY 518
           + S +  H ++ HTG++PY    CE+ F    +L TH   +H    PY C +C +  + +
Sbjct: 425 QNSDLLIHKSI-HTGEQPYKYEECEKVFSCGSTLETH-KIIHTGEKPYKCKVCDKAFACH 482

Query: 519 THLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPV 577
           ++L++H              +  GEK Y C +CS     +  L +H  +HS ++ ++C  
Sbjct: 483 SYLAKHT------------RIHSGEKPYKCNECSKTFRLRSYLASHRRVHSGEKPYKCNE 530

Query: 578 CLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQ----SESQLTC 633
           C + FS++S  + H RR+H   KP       +         KPS    +     E    C
Sbjct: 531 CSKTFSQRSYLHCH-RRLHSGEKPYKCNECGK-----TFSHKPSLVHHRRLHTGEKSYKC 584

Query: 634 DICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCN 693
            +CD+ F  +     H   H  ++   C  CG       QL LH R H    L++CE C+
Sbjct: 585 TVCDKAFVRNSYLARHTRIHTAEKPYKCNECGKAFNQQSQLSLHHRIHAGEKLYKCETCD 644

Query: 694 LGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKC 753
             +SRK   + H   H  K + + C  CD T  S   L  H  +H  E  + C  C    
Sbjct: 645 KVFSRKSHLKRHRRIHPGK-KPYKCKVCDKTFGSDSHLKQHTGLHTGEKPYKCNECGKAF 703

Query: 754 SKLS 757
           SK S
Sbjct: 704 SKQS 707

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score =  140 bits (352), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 208/543 (38%), Gaps = 51/543 (9%)

Query: 209 YSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAH--EYTEQCE 266
           YSC  C         L  H +       + CDEC   F+       H R H  E   QC 
Sbjct: 135 YSCNWCIKSFSRSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHTGEKPYQCS 194

Query: 267 LCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKE--AGHFTWNCEHCDF 324
            C++    ++ +  H         + C QC+         I+H+    G   + C+ C  
Sbjct: 195 HCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKHQRIHTGEKPYKCDVCAK 254

Query: 325 SASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDL--QKEELVRETRSMKM 382
           + S+ S L+ H + H               T E P   +       Q  +L++  R    
Sbjct: 255 AFSQSSDLILHQRIH---------------TGEKPYPCNQCSKSFSQNSDLIKHRRIHTG 299

Query: 383 YDNYKCNICDCFFKTHSILEDHMK---ALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEV 439
              YKCN C   F   S+L  H +       +PCD+C      LS L +HQ  H  +   
Sbjct: 300 EKPYKCNECGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHTGEKPY 359

Query: 440 PPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSL 499
           P         C  C+++F R S + KH  + HTG+KPY C  C + F  S +L  H   +
Sbjct: 360 P---------CNQCNKMFSRRSDLVKHHRI-HTGEKPYECDECGKTFSQSSNLILHQR-I 408

Query: 500 HALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKH 558
           H    PY C+ C +  S+     R  L+ HQ+       +  GEK Y+C QC        
Sbjct: 409 HTGEKPYPCSDCTKSFSR-----RSDLVKHQR-------IHTGEKPYACNQCDKSFSQSS 456

Query: 559 ALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRM 618
            L  H  +HS ++ + C  C + FS+ SD   HQR +H   KP       +   Q +  +
Sbjct: 457 DLTKHQRVHSGEKPYHCNSCEKAFSQSSDLILHQR-IHTGEKPYLCTQCSKSFSQNSDLI 515

Query: 619 KPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQ 678
           K        E    C  C + F       LH   H  ++  PC  CG     H  L  HQ
Sbjct: 516 KHQRIHT-GEKPYKCSECRKAFSQCSALTLHQRIHTGEKPNPCNECGKSFSRHSDLINHQ 574

Query: 679 RYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVH 738
           + H     ++C+ C   +S       H   H   E+ + C QC  + S    L  H  VH
Sbjct: 575 KIHTGEKPYKCDACGKAFSTCTDLIEHQKIH-AGEKPYRCVQCSRSFSQLSELTIHEEVH 633

Query: 739 ADE 741
             E
Sbjct: 634 CGE 636

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  137 bits (346), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 182/778 (23%), Positives = 289/778 (37%), Gaps = 88/778 (11%)

Query: 26   RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM 85
            RIH  +  + C  C  +   S+ +  H   HTG KPY C  C    + S  L  H  +  
Sbjct: 286  RIHTGEKPYKCEECGKAFSHSSTLAKHKRIHTGEKPYKCEECGKAFSRSSTLAKHKRIHT 345

Query: 86   LQYLY-----GASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIF 140
             +  Y     G +F     L+N         ++   K   C+    ++ +T ++H  +I 
Sbjct: 346  GEKPYKCKECGKAFSNSSTLANHKITHT---EEKPYKCKECDKAFKRL-STLTKH--KII 399

Query: 141  YANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLC----NYQAVNIKGIRA 196
            +A  K      ++C K    R S + ++ K+     +  KC+ C    N+ +   K  R 
Sbjct: 400  HAGEKL--YKCEECGKA-FNRSSNLTIH-KFIHTGEKPYKCEECGKAFNWSSSLTKHKRF 455

Query: 197  HVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKG-ISFTCDECHLCFNTFRRFDSH 255
            H   K       + CK+C     +  TL  H K  H G   + C+EC   F        H
Sbjct: 456  HTREK------PFKCKECGKAFIWSSTLTRH-KRIHTGEKPYKCEECGKAFRQSSTLTKH 508

Query: 256  --IRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCS-----FTTKTPKKFIE 308
              I   E   + E C +       +  H         + CK+C      F+T T  K I 
Sbjct: 509  KIIHTGEKPYKFEECGKAFRQSLTLNKHKIIHSREKPYKCKECGKAFKQFSTLTTHKII- 567

Query: 309  HKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTR-------------VTRTQHMTPDEET 355
               AG   + CE C  + +  S L +H   H                 + T        T
Sbjct: 568  --HAGKKLYKCEECGKAFNHSSSLSTHKIIHTGEKSYKCEECGKAFLWSSTLRRHKRIHT 625

Query: 356  NEIPIEPDLSPDL--QKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS--- 410
             E P + +           L +  R       YKC  C   F   S L +H K  H+   
Sbjct: 626  GEKPYKCEECGKAFSHSSALAKHKRIHTGEKPYKCKECGKAFSNSSTLANH-KITHTEEK 684

Query: 411  -FPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIAL 469
             + C +CD     LS LT H+  H  +            +CE C + F R+S +  H  +
Sbjct: 685  PYKCKECDKTFKRLSTLTKHKIIHAGEKLY---------KCEECGKAFNRSSNLTIHKFI 735

Query: 470  KHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLL-- 527
             HTG+KPY C  C + F  S SL  H   +H    P+ C  C +     + L+RHK +  
Sbjct: 736  -HTGEKPYKCEECGKAFNWSSSLTKHKR-IHTREKPFKCKECGKAFIWSSTLTRHKRIHT 793

Query: 528  --------------VHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRK 572
                               +    ++  GEK Y C +C     H  AL  H  +H+ ++ 
Sbjct: 794  GEKPYKCEECGKAFSRSSTLTKHKTIHTGEKPYKCKECGKAFKHSSALAKHKIIHAGEKL 853

Query: 573  HQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLT 632
            ++C  C + F++ S+  TH + +H   KP+  E + +K    +  +         E    
Sbjct: 854  YKCEECGKAFNQSSNLTTH-KIIHTKEKPSKSE-ECDKAFIWSSTLTEHKRIHTREKTYK 911

Query: 633  CDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKC 692
            C+ C + F        H   H  ++   C+ CG        L  H+  H     ++CE+C
Sbjct: 912  CEECGKAFSQPSHLTTHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKPYKCEEC 971

Query: 693  NLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD 750
               + +  +   H   H   E+ + C +C    S   TL  H  +H  E  + C+ C 
Sbjct: 972  GKAFRKSSTLTEHKIIHTG-EKPYKCEECGKAFSQSSTLTRHTRMHTGEKPYKCEECG 1028

Homo sapiens (taxid: 9606)

>sp|Q6ZNA1|ZN836_HUMAN Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2

 Score =  137 bits (346), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 178/750 (23%), Positives = 278/750 (37%), Gaps = 84/750 (11%)

Query: 24  MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC--TFKGASSQALKYHM 81
           + + H  +  +MC  C  +  +S+++ NH M HT  KPY C+ C   F   S   +   +
Sbjct: 208 LEKTHIREKPYMCKGCGKAFRVSSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIHQIV 267

Query: 82  HVDMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFY 141
           H     Y  G     F    N D  +      G+  +           N C +   + + 
Sbjct: 268 HTRGKPYQCGVCGKIF--RQNSDLVNHRRSHTGEKPYKC---------NECGKSFSQSYN 316

Query: 142 ANI-KREHLD--PDDCPKYKMTRESGIKLNIKYDMNEAED-LKCKLC------NYQAVNI 191
             I +R H    P  C +   T + G  L     ++  E   +C +C      N   VN 
Sbjct: 317 LAIHQRIHTGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNH 376

Query: 192 KGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKG-ISFTCDECHLCFNTFR 250
           +  R H   K       Y C  C         L  H +T H G   + CDEC   F    
Sbjct: 377 Q--RIHTGEK------PYKCNICGKSFSQSSNLATH-QTVHSGNKPYKCDECGKTFKRSS 427

Query: 251 RFDSH--IRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIE 308
              +H  I   E    C++C++    ++Q+  H         + C +C          + 
Sbjct: 428 SLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGKVFSQTSHLVG 487

Query: 309 HKE--AGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSP 366
           H+    G   + C+ C  +  + S+L  H   H TR  R Q      E  ++  E     
Sbjct: 488 HRRIHTGEKPYKCDKCGKAFKQGSLLTRHKIIH-TREKRYQ----CGECGKVFSENSC-- 540

Query: 367 DLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGN 422
                 LVR  R       YKCN+C   F     L  H K +H+    F C++C  V  N
Sbjct: 541 ------LVRHLRIHTGEQPYKCNVCGKVFNYSGNLSIH-KRIHTGEKPFQCNECGTVFRN 593

Query: 423 LSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLC 482
            S L  H   H  Q            +C  C ++F  +  +  H  + HTG+KP+ C  C
Sbjct: 594 YSCLARHLRIHTGQKPY---------KCNVCGKVFNDSGNLSNHKRI-HTGEKPFQCNEC 643

Query: 483 EEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIG 542
            + F     L  H   +H    PY CN C +  ++ + L++H L++H            G
Sbjct: 644 GKVFSYYSCLARH-RKIHTGEKPYKCNDCGKAYTQRSSLTKH-LIIH-----------TG 690

Query: 543 EK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKP 601
           EK Y+C +          L  +    + ++ H+C  C R FS  +    HQRR  G +  
Sbjct: 691 EKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGEMPY 750

Query: 602 TPLE-MQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLP 660
             +E  QV        R +        E    C+ C +VF+       H   H  ++   
Sbjct: 751 KCIECGQVFNSTSNLARHRRI---HTGEKPYKCNECGKVFRHQSTLARHRSIHTGEKPYV 807

Query: 661 CKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQ 720
           C  CG   +    L  HQ+ H     ++C +C   +  +    YH  +H   E+ + C +
Sbjct: 808 CNECGKAFRVRSILVNHQKMHTGDKPYKCNECGKAFIERSKLVYHQRNHT-GEKPYKCIE 866

Query: 721 CDFTSSSKDTLNTHAMVHADELKFSCQNCD 750
           C         LN H M+H+ E  + C  C 
Sbjct: 867 CGKAFGRFSCLNKHQMIHSGEKPYKCNECG 896

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	771
260808213	1141	hypothetical protein BRAFLDRAFT_107338 [	0.856	0.578	0.235	4e-42
260791392	745	hypothetical protein BRAFLDRAFT_89519 [B	0.869	0.899	0.235	1e-41
260813386	1077	hypothetical protein BRAFLDRAFT_103420 [	0.900	0.644	0.241	1e-41
260823124	954	hypothetical protein BRAFLDRAFT_119785 [	0.840	0.679	0.239	2e-41
260781334	1016	hypothetical protein BRAFLDRAFT_111167 [	0.871	0.661	0.235	7e-41
260783431	830	hypothetical protein BRAFLDRAFT_102936 [	0.907	0.843	0.239	1e-40
260823012	1154	hypothetical protein BRAFLDRAFT_71735 [B	0.905	0.604	0.235	3e-40
260806364	713	hypothetical protein BRAFLDRAFT_62602 [B	0.844	0.913	0.239	4e-40
260795687	945	hypothetical protein BRAFLDRAFT_65421 [B	0.918	0.749	0.240	4e-40
260818451	1020	hypothetical protein BRAFLDRAFT_58764 [B	0.879	0.664	0.252	1e-39

>gi|260808213|ref|XP_002598902.1| hypothetical protein BRAFLDRAFT_107338 [Branchiostoma floridae] gi|229284177|gb|EEN54914.1| hypothetical protein BRAFLDRAFT_107338 [Branchiostoma floridae]

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 186/790 (23%), Positives = 297/790 (37%), Gaps = 130/790 (16%)

Query: 6   FESSNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS 65
           F ++  +DL  H R       IH  +  + C  C YS    +++  H+  HTG KPY C 
Sbjct: 281 FRTARKSDLSKHMR-------IHTGEKPYKCDQCDYSAAQKSHLDQHLTKHTGDKPYMCG 333

Query: 66  HCTFKGASSQALKYHMHVDMLQYLY------------GASFDRFPHLSNDDDDDDDDGDD 113
            C ++ +    L  HM     +  Y            G S           ++    G  
Sbjct: 334 ECGYRTSRKSYLSQHMKTHTGEKPYKCDQKEMASPSCGGSTGGLC-TGYSGNETGGPGHP 392

Query: 114 GDVKFDVCNG-IINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYD 172
           G+    +C G   N+ E       D+  YA   + HLD        +T+ +G K  +   
Sbjct: 393 GNETDGLCTGHPGNETEGEKPYKCDQCDYAAAWKSHLDKH------VTKHTGEKPYM--- 443

Query: 173 MNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCH 232
                   C  C Y+A     +  H+ R H      Y C +C +    K +L  H    H
Sbjct: 444 --------CGECGYRAAQKINLTVHM-RMHT-GVKPYKCDQCDYSAAHKSSLYKHRLAKH 493

Query: 233 KG-ISFTCDECHLCFNTFRRFDSHIRAH--EYTEQCELCNEKVIGKNQIYFHYYHEHEGY 289
            G   + C EC            H+R H  E + +C+ C+     K  +  H        
Sbjct: 494 TGEKPYLCGECGYRTADRSTLSRHMRTHTREKSYKCDQCDYSAAEKFALVQHLTKHTGEK 553

Query: 290 DFNCKQCSFTTKTPKKFIEHKEA--GHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQ 347
            + C +C   T      + H     G   + C+ CD+SA++KS L  H+ +H  +     
Sbjct: 554 PYMCGECGLRTAWKSTLLRHMRTHTGEKPYRCDQCDYSAAEKSTLDDHITKHTGQ----- 608

Query: 348 HMTPDEETNEIPIEPDLSPDLQKEELVRE--TRSMKMYDN---YKCNICDCFFKTHSILE 402
                        +P +  +      +R   +R MK +     YKC+ C+      S L 
Sbjct: 609 -------------KPYMCGECGYRTALRANLSRHMKTHTGGKLYKCDQCNYSAARKSALS 655

Query: 403 DHMK---ALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRR 459
            H+K       + CD CDY     S    H   H               +C+ C     R
Sbjct: 656 FHVKRHTGEKLYKCDHCDYSTTQKSSFDIHLARHTGDKPY---------KCDQCDYSAAR 706

Query: 460 ASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC----FRRN 515
            S ++ H+A +HTG+KPY C  C  +  +  +L  HM + H    P+ C+ C     R++
Sbjct: 707 KSHLDLHLA-RHTGEKPYMCDECGYRAAHKSNLSRHMKT-HTGEKPFKCDQCDYSATRKS 764

Query: 516 SKYTHLSRH-----------KLLVHQKQIDGV-GSVEIGEK-YSCTQCSYQTYHKHALDN 562
           + Y H+ +H               +QK    +      GE+ Y C QC Y   HK +LD 
Sbjct: 765 TLYQHVEKHTGEKPYMCGECGYRTNQKSTLSIHMRSHTGERPYKCDQCDYSAAHKSSLDQ 824

Query: 563 HMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSA 622
           H+  HS D+ + C  C  R + +S  + H R  H   KP                     
Sbjct: 825 HLAKHSGDKPYMCGECGYRTTHKSALSKHMR-THTGEKP--------------------- 862

Query: 623 FEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHL 682
                     CD CD           H+  H  ++   C  CG+R  +   L  H R H 
Sbjct: 863 --------YKCDQCDYSAAQKSHLDYHLTKHTGEKPYNCGECGYRTTHKSALSKHMRTHT 914

Query: 683 SSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADEL 742
               ++C++C+   ++K + + H+  H   E+ +MC +C F S+ + TL+ H   H ++ 
Sbjct: 915 GEKPYKCDQCDYSAAQKSNLDNHLVKHTG-EKPYMCGECGFRSAGRSTLSRHMKTHTEDK 973

Query: 743 KFSCQNCDFK 752
            F C  C ++
Sbjct: 974 PFKCGECGYR 983

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260791392|ref|XP_002590713.1| hypothetical protein BRAFLDRAFT_89519 [Branchiostoma floridae] gi|229275909|gb|EEN46724.1| hypothetical protein BRAFLDRAFT_89519 [Branchiostoma floridae]

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 182/773 (23%), Positives = 291/773 (37%), Gaps = 103/773 (13%)

Query: 26  RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM 85
           R+H  +  + C  C YS  + + +  HI  HTG KPY C  C ++ A    L  HM    
Sbjct: 20  RMHTGEKPYKCDQCDYSAAVKSTLDQHIAKHTGEKPYMCEECGYRAARKSTLSKHMRSHT 79

Query: 86  LQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIK 145
            +  Y                          K D C+    +  +  S H        +K
Sbjct: 80  GEKPY--------------------------KCDQCDYSAARKSSLDSHHT-------VK 106

Query: 146 REHLDP---DDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKH 202
                P   D+C  Y+ TR++ +  +++    E +  KC  C + A     +  H+  KH
Sbjct: 107 HTGEKPYMCDECG-YRATRKAHLSQHMRTHTGE-KPYKCDQCEFSAAYKSSLYKHLT-KH 163

Query: 203 LQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAH--E 260
                 Y C +C + T  K  L  H +T      + CD+C            H+  H  E
Sbjct: 164 T-GEKPYMCGECGYRTAEKCNLSRHIRTHTGDKPYKCDQCDYSAALKSTSHQHVAKHTGE 222

Query: 261 YTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEH--KEAGHFTWN 318
               C  C  +   K+ +  H         + C QC ++        +H  K +G   + 
Sbjct: 223 KPYMCGECGYRTAHKSHLSVHMRIHTGEKLYMCDQCDYSAAQKSSLDQHLTKHSGEKPYM 282

Query: 319 CEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETR 378
           C+ C +  + KS L  H++ H               T E P + D        + + ++ 
Sbjct: 283 CDECGYKTAHKSNLYRHVRTH---------------TGERPYKCDQCDFSAAHKSIMDSH 327

Query: 379 SMKMYDN--YKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNS 432
             K      Y C  C       S L  H++ +H+    + CD+CDY     S +  HQ  
Sbjct: 328 QTKHTGEKPYMCGECGYRTADRSSLSRHLR-IHTGEKPYKCDQCDYSAAEKSKIKQHQVK 386

Query: 433 HNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESL 492
           H  +    P +      C+ C     +  +++ HIA KHT  KPY C  C  K  +  +L
Sbjct: 387 HTGEK---PYM------CDRCDYSAAQKISLDSHIAAKHTNKKPYMCDECGYKAAHKSNL 437

Query: 493 RTHMNSLHALLFPYSCNIC----FRRNSKYTHLSRHKLL-------VHQKQIDGVG---- 537
             HM + H    PY C+ C      +N+  +HL++H             +  DG      
Sbjct: 438 YRHMRT-HTGERPYKCDQCDFSAAHKNTMDSHLTKHTGEKPYMCGECGYRTADGSSLSRH 496

Query: 538 -SVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRV 595
                GEK Y C QC Y    K  L  H   H+ ++ + C  C  R + +++ ++H R  
Sbjct: 497 LRTHTGEKTYKCDQCDYSAAEKSKLKQHQVKHTGEKPYMCGECGYRTAYKANLSSHMRTH 556

Query: 596 HGVLKPTPL-----EMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHM 650
             V    P        +  +R  +   ++        E    CD CD           H+
Sbjct: 557 TRVESKKPFMCGECGHRATRRSHLFQHIRTHT----GEKPYKCDQCDYSAALKSTLDRHL 612

Query: 651 GFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHN 710
             H  ++   C  CG+R  +  +L  H R H S   + CE+C    ++K     HM +H 
Sbjct: 613 AIHTGEKPYICDECGYRFISKSKLTTHMRTHTSEKPYTCEECGYRATQKSCMYRHMRTHT 672

Query: 711 QKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVI 763
             E+ + C QCD+++  K TLN H   H  E  + C  C F+ +  S +   I
Sbjct: 673 G-ERPYKCDQCDYSAGQKSTLNQHVRKHTGEKPYMCGECGFRTADRSSLSQHI 724

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260813386|ref|XP_002601399.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae] gi|229286694|gb|EEN57411.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae]

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 185/766 (24%), Positives = 281/766 (36%), Gaps = 72/766 (9%)

Query: 26   RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HV 83
            R H  + ++MC  C Y T   +++  HI THTG KPY C  C +  A +  L  H   H 
Sbjct: 292  RKHTGEKRYMCGECGYRTAYKSDLSKHIRTHTGEKPYKCDQCDYSAADNTTLTNHQKKHT 351

Query: 84   DMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCN---GIINKIENTCSEHNDRIF 140
                Y+ G    R    S           +   K D C+   G    ++    +H     
Sbjct: 352  GEKPYMCGECGFRTTRKSILSAHVRTHTGERPYKCDQCDYSAGQKCDLDKHVVKHTGEKP 411

Query: 141  YANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFR 200
            Y           +C  Y+  R+S +  +++    E +  KC  C+Y A     +  H+  
Sbjct: 412  YMC--------GECG-YRTARKSDLSKHMRTHTGE-KPYKCYQCDYSAPQKNHLDLHLL- 460

Query: 201  KHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAH- 259
            KH      Y C +C + T  K  L  H +T      + CD+C          D+H+  H 
Sbjct: 461  KHT-GEKPYMCGECGYRTALKTNLSRHMRTHTGEKPYKCDQCDYSAAQKDTLDAHVATHT 519

Query: 260  -EYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEH--KEAGHFT 316
             E    CE C      K+ +  H         + C QC ++        +H  K  G   
Sbjct: 520  GEKPYTCEECGHSTTTKSHLSRHMRTHTGEKPYKCDQCDYSAAVKSSLDQHLAKHTGDKP 579

Query: 317  WNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLS--PDLQKEELV 374
            + CE C +  ++   L  H++ H               T E P + D       QK+ L 
Sbjct: 580  YMCEECGYRTARNFDLSKHMRTH---------------TGEKPYKCDQCDYSAAQKQHLH 624

Query: 375  RETRSMKMYDNYKCNICDCFFKTHSILEDHMK---ALHSFPCDKCDYVGGNLSMLTSHQN 431
                       Y C  C       S L  HM+       + CD+CDY      ML  H  
Sbjct: 625  SHLAKHTGEKPYMCGECGHRAARKSHLMVHMRTHTGDKPYKCDQCDYSTAQKGMLDQHLM 684

Query: 432  SHNSQTE---------VPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLC 482
             H+   +         V     K    C  C     R S + +H    HTG+KPY C  C
Sbjct: 685  KHSEDVQESRGYTGRHVVKHTGKKPYICGECGYRTERKSNLSQHTRT-HTGEKPYKCDQC 743

Query: 483  EEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKL---------------- 526
            +       SL  H+  +H+   PY C  C  R S+ ++LSRH                  
Sbjct: 744  DYSAARKSSLDKHLQ-IHSGEKPYMCGECGYRTSQKSYLSRHMRTHTGGKPYKCDQCDYS 802

Query: 527  LVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQ 585
               +  +D       GEK Y C +C Y+   K  L  HM  H+ ++ ++C  C    +R+
Sbjct: 803  AAQKPHLDRHLRKHSGEKPYMCGECGYRATLKSYLSKHMRTHTGEKSYKCDQCDYFAARK 862

Query: 586  SDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQ 645
            S+ + H R+ H   KP  +  +   R  +   +         E    CD CD        
Sbjct: 863  SNLDRHLRK-HSGEKPY-MCGECGYRATLKSYLSKHMRTHTGEKSYKCDQCDYFAARKSN 920

Query: 646  WKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYH 705
               H+  H  ++   C  CG+R      L  H R H     ++C++C+   + +     H
Sbjct: 921  LDRHLRTHTGEKPYMCGECGYRAAQMSDLSKHMRTHTGEKPYKCDQCDYSAADQSWLVKH 980

Query: 706  MTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDF 751
               H   E+ +MC +C + S  K TL  H   H  E  + C  CD+
Sbjct: 981  KRKHTG-EKPYMCDECGYRSDRKPTLAQHIRTHTGEKPYKCDQCDY 1025

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260823124|ref|XP_002604033.1| hypothetical protein BRAFLDRAFT_119785 [Branchiostoma floridae] gi|229289358|gb|EEN60044.1| hypothetical protein BRAFLDRAFT_119785 [Branchiostoma floridae]

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 182/761 (23%), Positives = 300/761 (39%), Gaps = 113/761 (14%)

Query: 28  HPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HVDM 85
           H  +  +MC  C Y T   +++  H  THTG KPY C  C +  A    L YH+  H   
Sbjct: 156 HSGEKPYMCGECGYRTDRKSHLSRHTRTHTGEKPYKCDQCDYSAARKSTLDYHLVKHTGD 215

Query: 86  LQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDR------- 138
             Y+ G    +    S +   +            +C G   K E  C E+ ++       
Sbjct: 216 KPYMCGECGIKMEDSSCEHSTEK-----------LCAGHPGK-ETNCPENPEKESDSRET 263

Query: 139 -IFYANIKREHLDPD-DCPKYKMTRES--GIKLNIKYDMNEAEDLKCKLCNYQAVNIKGI 194
                 +++E  D +   P   + +ES   +  ++  +  E   + C  C Y+ V    +
Sbjct: 264 QTTDMGLQQETCDVNFPQPDNTLAQESRGDVGRHVFKETGEKSHI-CWECGYKTVQKSDL 322

Query: 195 RAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFD- 253
             H+  K       Y C +C +    K  L  H +       + CDEC   ++ F + D 
Sbjct: 323 SKHM--KTHTGEKPYKCDQCDYSAAHKSHLDRHLRKHTGEKPYMCDECG--YSAFHKSDL 378

Query: 254 -SHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEH-- 309
             H+R H   ++   C+     K+ +  H   +H G   + C +C   T +  +   H  
Sbjct: 379 SRHMRTHT-GDKPYKCDYSSAHKSALDRHLVVKHTGEKPYMCGECGHRTASKSRLSLHMR 437

Query: 310 KEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQ 369
              G   + C+ CD+SA++KS L  HL +H    T          T E P          
Sbjct: 438 THTGEKPYKCDQCDYSAAQKSSLDQHLSKHTDMRT---------HTGEKP---------- 478

Query: 370 KEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMK---ALHSFPCDKCDYVGGNLSML 426
                           YKC+ CD      S L+ H+        + CD+C Y   + S L
Sbjct: 479 ----------------YKCDQCDYSAAQKSSLDQHLSKHTGEKPYMCDECGYSAFHKSDL 522

Query: 427 TSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKF 486
           + H  +H               +C+ C       SA+++H+ +KHTG+KPY C  C  + 
Sbjct: 523 SRHMRTHTGDKPY---------KCDQCDYSSAHKSALDRHLVVKHTGEKPYMCGECGHRT 573

Query: 487 ENSESLRTHMNSLHALLFPYSCNIC----FRRNSKYTHLSRHKLLVHQKQIDGVGSVEIG 542
                L  HM + H    PY C+ C     +++S   HLS+H                 G
Sbjct: 574 AFKSRLSLHMRT-HTGEKPYKCDQCDYSAAQKSSLDQHLSKH----------------TG 616

Query: 543 EK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKP 601
           EK Y C +C Y+T  K  L  HM  H+ ++ + C  C    + +S  + H R+ H   KP
Sbjct: 617 EKPYMCGECGYRTASKSHLSLHMRTHTGEKPYNCDQCDYSVAHKSHLDRHLRK-HTGEKP 675

Query: 602 ---TPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRR 658
                   +  +R  ++L MK        E    CD C+           H+  H  ++ 
Sbjct: 676 YMCGECGYRTAQRCTLSLHMKTHT----GEKPYKCDQCEYSAARKSTLDKHLRKHTGEKP 731

Query: 659 LPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMC 718
             C  CGFR  + + L  H R H     ++C++C+   +RK + + H  + +  E+ ++C
Sbjct: 732 YMCGECGFRTTHKESLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHSGEKPYIC 791

Query: 719 TQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCV 759
            +C + +  K  L+ H   H  E  + C  CD+  ++ S +
Sbjct: 792 GECGYRAVHKSDLSKHMRTHTGEKPYKCDQCDYSAAQKSTL 832

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260781334|ref|XP_002585772.1| hypothetical protein BRAFLDRAFT_111167 [Branchiostoma floridae] gi|229270813|gb|EEN41783.1| hypothetical protein BRAFLDRAFT_111167 [Branchiostoma floridae]

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 195/829 (23%), Positives = 311/829 (37%), Gaps = 157/829 (18%)

Query: 26  RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM 85
           R H  +  +MC  C   TY S ++  H+ THTG KPY C  C +  A  + +        
Sbjct: 171 RKHTGEKPYMCGECG-KTYKS-HLSKHMRTHTGEKPYKCDQCDYSTAQIKGM-------A 221

Query: 86  LQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIK 145
                G++    P  S ++      G  G           N+ E       D+  YA  +
Sbjct: 222 SPSCGGSTGGLHPGYSGNETGGLHPGHPG-----------NETEGEKPYKCDQCDYAAAR 270

Query: 146 REHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQN 205
           + HLD        +T+ +G K  +              C+Y A     +  H+  KH  N
Sbjct: 271 KSHLDKH------LTKHTGEKPYMA-----------GKCDYSAALKSTLDKHLA-KHAGN 312

Query: 206 TVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQ- 264
              Y C +C + T  K TL +H +T      + CD+C   ++T R+F   I   ++T + 
Sbjct: 313 K-PYMCGECGYRTARKYTLYEHMRTHTGEKPYKCDQCD--YSTGRKFSLEIHLAKHTGEK 369

Query: 265 ---CELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKE--AGHFTWNC 319
              C+ C+     K  +  H         + C++C + T        H     G   + C
Sbjct: 370 PYKCDQCDYSAAQKCDLDRHLAKHTGEKPYMCEECGYRTSLKSDLSRHIRIHTGEKPYKC 429

Query: 320 EHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSP--DLQKEELVRET 377
           + CD+SA++K  L+ HL +H               T E P           +K  L+R  
Sbjct: 430 DQCDYSAAQKFNLVRHLTKH---------------TGEKPYMCGECGFRTTRKSTLLRHM 474

Query: 378 RSMKMYDNYKCNICDCFFKTHSILEDHM-----------------KALHS---------- 410
           R+      YKC+ CD      S L+DHM                  AL +          
Sbjct: 475 RTHTGEKPYKCDQCDYSAAEQSTLDDHMTKHTGQKPYMCGECGYRTALRASLSRHMKTHT 534

Query: 411 ----FPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKH 466
               + CD CDY     S L++H   H  +            +C+ C     + S+   H
Sbjct: 535 GEKPYKCDLCDYSAARKSTLSAHVKRHTGEKLY---------KCDQCDYSTTQKSSFNIH 585

Query: 467 IALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRH-- 524
           +A +HTGDKPY C  C+        L  H+ + H    PY C+ C  R +  ++LSRH  
Sbjct: 586 LA-RHTGDKPYKCDQCDYSAARKYHLDLHL-ARHTGEKPYMCDECGYRAACKSNLSRHMR 643

Query: 525 -------------------KLLVHQKQIDGVGS-----------------------VEIG 542
                              K  +HQ     +G                           G
Sbjct: 644 THTGEKPFKCDQCDYSATRKSTLHQHVEKHIGEKPYMCGECGYRTNQKSTLSNHMRTHTG 703

Query: 543 EK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKP 601
           EK Y C QC Y   HK +LD H+  H+ ++ + C  C  R + +SD   H     GV   
Sbjct: 704 EKPYKCDQCDYSAAHKFSLDIHLAKHTGEKPYMCGECGYRTAHKSDLTKHVITHTGVNPT 763

Query: 602 TPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPC 661
               +   +   ++  M+        E    CD CD          +H+  H   +   C
Sbjct: 764 CVGSVGTGQLTTLSKHMRTHT----GEKPYKCDQCDYSAAQKSTLVIHLAIHTGDKPYKC 819

Query: 662 KLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQC 721
             CG+R      L  H R H     ++C++C+   + K S   H+  H   ++ + C QC
Sbjct: 820 DQCGYRTARKSGLSKHMRTHTGEKPYKCDQCDYSAAHKSSLVIHLAIHTG-DKPYKCDQC 878

Query: 722 DFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCV-RNVISQVAQK 769
           D++++ K TL  H   H  E  + C  C ++ ++ S + +++I+   +K
Sbjct: 879 DYSATRKFTLELHLRKHTGEKPYMCGECGYRTAQKSDLSKHMITHTGEK 927

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260783431|ref|XP_002586778.1| hypothetical protein BRAFLDRAFT_102936 [Branchiostoma floridae] gi|229271904|gb|EEN42789.1| hypothetical protein BRAFLDRAFT_102936 [Branchiostoma floridae]

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 188/786 (23%), Positives = 309/786 (39%), Gaps = 86/786 (10%)

Query: 35  MCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HVDMLQYLYGA 92
           MC  C Y     + +  H+ THTG KP+ C  C +  A    L+ H+  H     Y+ G 
Sbjct: 1   MCGECGYRAAHKSGLSRHLRTHTGEKPFKCDQCDYSAAQKCDLQKHVTKHTGDKPYMCGE 60

Query: 93  SFDRFPHLSNDDDDDDDDGDDGDVKFDVCN---GIINKIENTCSEH-NDRIFYANIKREH 148
              R    S+         D+   K D C+      + ++   ++H  D+ +        
Sbjct: 61  CGYRAARKSHLSQHMRTHTDEKPYKCDQCDYSAAQKSTLDKHVAKHTGDKPYMCG----- 115

Query: 149 LDPDDCPKYKMTRESGIKLNIKYDMN-------EAEDLKCKLCNYQAVNIKGIRAHVFRK 201
               +C  Y+ TR+  +  +++   +         +  KC  C+Y A     +  HV  K
Sbjct: 116 ----ECG-YRTTRKDSLSQHMRTHTDIHMRTHTVEKPYKCDQCDYSAAEKSNLVRHVT-K 169

Query: 202 HLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEY 261
           H      Y C +C + T  K TL  H +T      + CD+C          D H+  H  
Sbjct: 170 HTSEKP-YMCGECGYRTTQKHTLLRHMRTHTGEKPYKCDQCDYSAAEKSTLDDHMTKHTG 228

Query: 262 TE--QCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTT--KTPKKFIEHKEAGHFTW 317
            +   C  C  +   +  +  H      G  + C QC+++   K+   F   +  G   +
Sbjct: 229 QKPYMCGECGYRTALRANLSRHMKTHTGGKLYKCDQCNYSAARKSDLSFHVKRHRGEKLY 288

Query: 318 NCEHCDFSASKKSVLLSHLKQH---------------VTRVTRTQHMTPDEETNEIPIEP 362
            C+HCD+S ++KS L  HL +H                 +   ++HM     T E P + 
Sbjct: 289 KCDHCDYSTTQKSSLDIHLAKHSGEKPYMCDKCGYRAACKSNLSRHMRT--HTGEKPYKC 346

Query: 363 DLS--PDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMK---ALHSFPCDKCD 417
           D       +K  LVR          Y C  C       S L  HM+       + CD+CD
Sbjct: 347 DQCDYSAAEKCALVRHVTKHTGEKPYMCGECGYRTAYKSDLSKHMRTHTGAKPYKCDQCD 406

Query: 418 YVGGNLSMLTSHQNSHNS-----------QTEVPPILSKNKR--------QCEYCSQLFR 458
           Y     S L  H   H+            +T     LSK+ R        +C++C     
Sbjct: 407 YSAAQKSSLDQHLAKHSGDKPYMCGECGYRTTYKSDLSKHMRTHTGEKPYKCDHCDYSAA 466

Query: 459 RASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKY 518
           +   V++H+  KHTG+KPY C  C  +      L  H  + H    PY C  C  R  + 
Sbjct: 467 QKFNVDQHLT-KHTGEKPYMCEECGYRAARRSHLSRHKRT-HTEEKPYMCGECGYRTDRK 524

Query: 519 THLSRHKLLVH---QKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQ 574
            +LSRH +  H   +  +D   +    EK Y C +C Y+  +K  L  HM  H++++ ++
Sbjct: 525 CNLSRH-MKTHSAWKSHLDKHLTKHTSEKPYMCGECGYRAAYKSDLSRHMRTHTVEKPYK 583

Query: 575 CPVCLRRFSRQSDNNTHQRRVHGVLKP---TPLEMQVEKRDQVALRMKPSAFEMQSESQL 631
           C  C    + +S+   H  + H   KP        +  ++  +   M+        E   
Sbjct: 584 CDQCDYSAAEKSNLVRHVTK-HTSEKPYMCGECGYRTTQKHTLLRHMRTHT----GEKPY 638

Query: 632 TCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEK 691
            CD CD           HM  H  ++   C  CG+R      L  H + H    L++C++
Sbjct: 639 KCDQCDYSAAEKSTLDDHMTKHTGQKPYMCGECGYRTALRANLSRHMKTHTGGKLYKCDQ 698

Query: 692 CNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDF 751
           CN   +RK    +H+  H + E+ + C  CD++++ K +L+ H   H  E  + C  C +
Sbjct: 699 CNYSAARKSDLSFHVKRH-RGEKLYKCDHCDYSTTQKSSLDIHLSKHTGEKPYMCGECGY 757

Query: 752 KCSKLS 757
           + ++ S
Sbjct: 758 RTARKS 763

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260823012|ref|XP_002603977.1| hypothetical protein BRAFLDRAFT_71735 [Branchiostoma floridae] gi|229289302|gb|EEN59988.1| hypothetical protein BRAFLDRAFT_71735 [Branchiostoma floridae]

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 192/816 (23%), Positives = 296/816 (36%), Gaps = 118/816 (14%)

Query: 26   RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM 85
            R H  +  + C  C YS     ++  H+M H+G KP+ C  C ++ A    L  HM    
Sbjct: 267  RTHTGEKPYKCDQCDYSAAEKGHLDQHLMKHSGEKPFMCGECGYRAAQRSNLSQHMRTHT 326

Query: 86   LQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCN--GIINKIENTCSEH-----NDR 138
                Y      +     D  D       G+  + +C+  G    I+   S H      +R
Sbjct: 327  GDKPYKCDQCDYSSAQKDCLDKHRTNHTGEKPY-MCDHCGYRTAIKLHLSRHMRTHTGER 385

Query: 139  IFYAN----------IKREHLDPDDCPKYKMTRESGIKLNIKYDMNE-------AEDLKC 181
             F  N             EHL      KY   +E G +   K  + +        +  KC
Sbjct: 386  PFKCNQCDYSATHKSTLDEHLTKHTGEKYYKCKECGYRTTRKTHLYQHMRIHTGQKPFKC 445

Query: 182  KLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDE 241
              C+Y A     ++ H+  KH      Y C +C + T  K  L  H +   +   F CD+
Sbjct: 446  DQCDYSAAQKSALKQHLL-KHT-GEKPYMCGECGYRTTQKSKLSQHMRKHTEEKPFKCDK 503

Query: 242  CHLCFNTFRRFDSHIRAHEYTEQ---CELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSF 298
            C         F+ HI      E+   CE C      ++ +  H         F C QC +
Sbjct: 504  CDYSAARKSNFNRHITEKHSDEKPYMCEECGYFTANRSNLTAHIRTHTGEKPFKCDQCDY 563

Query: 299  TTKTPKKFIEH--KEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRV------------- 343
            +         H         + C+HCD+SA+ KS L  HL +H +               
Sbjct: 564  SAARKSDLSRHIRTHTREKPYKCDHCDYSAAHKSGLDQHLSKHSSEKPYMCGECGYWTAD 623

Query: 344  -TRTQHMTPDEETNEI-----PIEPDLSPDLQKEELVRETRSMKMY-------------D 384
             T+ +  + +  T E+       E   S    KE  +RET++  M              D
Sbjct: 624  RTKMEDSSCEHSTGELCAGYPGKEMGHSEQPGKESDIRETQTTDMGLQQETCDVNFPQPD 683

Query: 385  N-------------------------YKCNICDCFFKTHSILEDHM---KALHSFPCDKC 416
            N                         Y C  C       S L  HM        + CD C
Sbjct: 684  NTSTSQVQESRGNIGRHVVKHIGEKPYMCGECGYRTSQRSKLSRHMITHTGEKPYKCDHC 743

Query: 417  DYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKP 476
            DY     S L  H   H+      P +      C  C     R + +  HI + HTGDKP
Sbjct: 744  DYSAVQKSSLDHHLAKHSGNK---PYM------CGECGYSTARKNDLSVHIRI-HTGDKP 793

Query: 477  YSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGV 536
            Y C  C+       +L  H+ + H    PY C  C  R ++ ++LSRH +  H       
Sbjct: 794  YKCDQCDYSAAVKSTLDQHLTT-HTGEKPYMCGECGFRAAQKSNLSRH-MRTH------- 844

Query: 537  GSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRV 595
                 G+K Y C QC Y    KH L  H   HS ++   C  C  R + +S  + H  ++
Sbjct: 845  ----TGDKPYKCDQCEYSAVEKHHLIGHQKTHSGEKPFMCGECGYRTADRSTLSRHM-KI 899

Query: 596  HGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNT 655
            H   KP  +  +   R      +         +    CD C+           H+  H  
Sbjct: 900  HSGEKPY-MCGECGYRAAYKYNLSKHMRTHTGQKPYKCDQCNYSAAQKSTLDQHLMKHTG 958

Query: 656  KRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQT 715
            ++   C  CG R      L  H R H     ++C++C+   ++K +F+ H+ + +  E+ 
Sbjct: 959  EKPYMCGECGHRTTTKSDLSRHMRIHTGERRYKCDQCDYSAAQKVNFDAHIAAKHTSEKP 1018

Query: 716  FMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDF 751
            FMC +C + ++ + TL+ H   H  E ++ C  CD+
Sbjct: 1019 FMCGECGYRTADRSTLSRHMRTHTGERRYKCDQCDY 1054

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260806364|ref|XP_002598054.1| hypothetical protein BRAFLDRAFT_62602 [Branchiostoma floridae] gi|229283325|gb|EEN54066.1| hypothetical protein BRAFLDRAFT_62602 [Branchiostoma floridae]

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/740 (23%), Positives = 290/740 (39%), Gaps = 89/740 (12%)

Query: 28  HPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HVDM 85
           H  +  +MC  C + T   + +  H++THTG KPY C  C +       L  H   H   
Sbjct: 32  HTGEKPYMCGECGFRTTTKSKLSIHLLTHTGEKPYKCDKCDYSATRKSTLDQHRTKHTGD 91

Query: 86  LQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKI----ENTCSEHNDRIFY 141
             Y+ G    R    S           +   K D C+    +     E+  + H D   Y
Sbjct: 92  KPYMCGECGYRSAQKSTLSQHMRTHTGEKPYKCDQCDYSAARKSTLDEHRATTHTDEKPY 151

Query: 142 ANIKREHLD--PDDCPK--YKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAH 197
              K +H    P  C K  +K  R++ +  +++    E   + C  C+Y A     + +H
Sbjct: 152 MCEKSKHTGEKPFMCGKCGFKTARKTYLSRHMRTHTGEKPYM-CGQCDYSAAQKVHVDSH 210

Query: 198 VFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFD--SH 255
           +  KH      Y C +C + T F  +L  H +T      + CD+C   ++T  + D   H
Sbjct: 211 IAAKHT-GEKPYMCGECGYRTAFNGSLSRHMRTHTGDKPYMCDQCD--YSTAHKSDLVKH 267

Query: 256 IRAH--EYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEH--KE 311
           IR H  E    C  C  + + K+++  H         + C QC ++         H  K 
Sbjct: 268 IRKHTGEKPYMCGECGYRTVQKSELSQHMRTHTGEKPYKCGQCDYSAARKHSLDRHRTKH 327

Query: 312 AGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKE 371
            G   + C  C +  ++KS L  H++ H               T E P + D   D    
Sbjct: 328 TGEKPFMCGECGYRTARKSDLSEHMRIH---------------TGEKPYKCDQC-DYSAA 371

Query: 372 ELVRETRSMKMYDNYKCNIC-DCFFKT--HSILEDHMK---ALHSFPCDKCDYVGGNLSM 425
                 + +  +   K  +C +C ++T   S L  HMK       F C++CDY   +LS 
Sbjct: 372 SKSNFNKHLAKHIGEKPYMCGECGYRTAWKSDLAKHMKIHMGQKPFKCEQCDYSSFDLS- 430

Query: 426 LTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIAL---KHTGDKPYSCYLC 482
              H  +H  +            +C+ C     +   +E H+AL   KHTG+KPY C  C
Sbjct: 431 --KHMRTHTGEKPY---------KCDQCDYSASQKPHLELHMALMAAKHTGEKPYMCGEC 479

Query: 483 EEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIG 542
             +     +L  HM + H    P+ C +C      +    +  L+ HQ       +   G
Sbjct: 480 GYRTARKFTLARHMRT-HTGEKPFKCELC-----DFAAAEKGNLVTHQ-------ATHTG 526

Query: 543 EK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKP 601
           +K Y C +C Y+T  K AL +HM +H+ ++ + C  C    SR+S            LKP
Sbjct: 527 DKPYMCEKCGYRTAQKSALSSHMRIHTGEKHYNCDQCDYSVSRKS-----------YLKP 575

Query: 602 ---TPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRR 658
                      ++  +   ++        E    CD CD           H   H   + 
Sbjct: 576 YKCGECGFSTTRKSTLYQHIRTHT----GEKPYRCDQCDFSAAVKVNLVTHQTTHTGDKP 631

Query: 659 LPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMC 718
             C  CG+R      L  H R H     ++C++C    ++K + +YH+ + + +E+ +MC
Sbjct: 632 YMCGECGYRAAQRSTLSKHMRTHTGEKPYKCDQCEYSTAQKVNLDYHIAAKHTREKPYMC 691

Query: 719 TQCDFTSSSKDTLNTHAMVH 738
            +C F ++ K  L+ H   H
Sbjct: 692 RECGFRTARKSNLSKHMETH 711

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260795687|ref|XP_002592836.1| hypothetical protein BRAFLDRAFT_65421 [Branchiostoma floridae] gi|229278060|gb|EEN48847.1| hypothetical protein BRAFLDRAFT_65421 [Branchiostoma floridae]

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 192/797 (24%), Positives = 314/797 (39%), Gaps = 89/797 (11%)

Query: 9   SNLNDLMYHCRACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCT 68
           S L  L+ H R        H  +  + C  C        ++K H+ THTG KPY C  C+
Sbjct: 70  SQLGSLIKHMR-------THTGEKPYKCEECSRQFNQLGHLKRHMRTHTGEKPYKCEECS 122

Query: 69  FKGASSQALKYHMHVDMLQYLY-----GASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNG 123
            + +    LK HM +   +  Y        F  F  L         +      K  +C  
Sbjct: 123 KQFSVLGVLKSHMRIHTGEKPYRCEECSRQFSLFHKLKRHMRTHTGE------KPYMCEK 176

Query: 124 IINKIENTCSEHNDRIFYANIKREHLDPDDCPK--YKMTRESGIKLNIKYDMNEAEDLKC 181
              +  + C+ +     +   K     P  C K   + ++   +K ++     E +  +C
Sbjct: 177 CSRQFSHVCAMNKHMRTHTGEK-----PYMCEKCSRQFSQLGALKSHMLTHTGE-KPYQC 230

Query: 182 KLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDE 241
             C+ Q   +  +  H+ R H      Y C++C  +      L  H +T      + C+E
Sbjct: 231 GECSRQFSELSNLERHM-RTHT-GEKPYRCEQCSRQFSHMENLKTHMRTHTGEKPYECEE 288

Query: 242 CHLCFNTFRRFDSHIRAH--EYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFT 299
           C   F+      +H+R+H  E   +CE C+ +      +  H         + C++CS  
Sbjct: 289 CSRQFSDLGNLKTHMRSHTGEKPYRCEECSRQFNELGSLKKHIRTHTGEKPYRCEECSRQ 348

Query: 300 TKTPKKFIEHKEA--GHFTWNCEHCDFSASKKSVLLSHLKQHVTRV---------TRTQH 348
                   +H     G   + CE C    S+   L  H++ H  ++          R++ 
Sbjct: 349 FSELGNLKKHMRTHTGEKPYRCEECSRQFSRLDDLKKHMRTHRGKLKGVRSAAGCIRSRR 408

Query: 349 MTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMK-- 406
           M+       +    D+   ++K   V    S K    Y+C  C+  F     L+ H++  
Sbjct: 409 MSTTSSAQGLG---DVRKKVKKGSSVG---SNKEEKPYRCEECNKQFSRLDNLKTHVRTH 462

Query: 407 -ALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEK 465
                + C++C      L  L  H  +H  +            +CE CS+ F + S ++K
Sbjct: 463 TGEKPYRCEECSRQFSQLGHLKEHMRTHTGEKPY---------RCEECSRQFSQPSDLKK 513

Query: 466 HIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHK 525
           H+   HTG+KPY C  C ++F     L++HM + H    PY C  C ++ S+   L +H 
Sbjct: 514 HMRT-HTGEKPYKCEECSKQFSQPGDLKSHMRT-HTGEKPYRCEECSKQFSRLDSLKKH- 570

Query: 526 LLVHQ--------------KQIDGVGS---VEIGEK-YSCTQCSYQTYHKHALDNHMPLH 567
           L  H+               Q+D + +      GEK Y C +CS Q      L  HM  H
Sbjct: 571 LRTHKGEKPYKCEECSRQFSQLDSLKTHMRTHTGEKPYRCEECSRQFSQLATLKTHMRTH 630

Query: 568 SLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLE---MQVEKRDQVALRMKPSAFE 624
           + ++ ++C  C R+FS      TH R  H   KP   E    Q  +   + + M+     
Sbjct: 631 TGEKPYRCEECSRQFSVLGALKTHMR-THTGEKPYRCEECSRQFSELGALEIHMRTHT-- 687

Query: 625 MQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSS 684
              E    C+ CDR F      K HM  H  ++   C+ C  +      LK H R H   
Sbjct: 688 --GEKPYRCEECDRQFSRLGALKKHMRTHTGEKPYRCEECDRQFSRLDSLKKHMRTHTGE 745

Query: 685 NLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKF 744
             +RCE+C+  +SR DS + HM +H   E+ +MC +C    S    LNTH   H  E  +
Sbjct: 746 KPYRCEECDRQFSRLDSLKKHMRTHT-GEKRYMCEECSRQFSQLGALNTHIRTHTGEKPY 804

Query: 745 SCQNCDFKCSKLSCVRN 761
            C  C  + S+L  +++
Sbjct: 805 RCDECSKQFSRLDTLKS 821

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260818451|ref|XP_002604396.1| hypothetical protein BRAFLDRAFT_58764 [Branchiostoma floridae] gi|229289723|gb|EEN60407.1| hypothetical protein BRAFLDRAFT_58764 [Branchiostoma floridae]

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 191/755 (25%), Positives = 305/755 (40%), Gaps = 77/755 (10%)

Query: 26  RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HV 83
           R H  +  + C  C     I  ++K H+ THTG KPY C  C+ + +    LK HM  H 
Sbjct: 160 RTHTGEKPYKCEECSKQFSILHHLKTHMRTHTGEKPYKCEECSKQFSMPGNLKSHMYTHT 219

Query: 84  DMLQYLYGASFDRFPHLSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYAN 143
               +       +F  LS+          +   K + C+   ++       H       +
Sbjct: 220 GEKPFKCEECSKQFSQLSDLKKHMRIHTGEKPFKCEECSKQFSR-----PGHLKIHLRIH 274

Query: 144 IKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHL 203
              +    ++C K + ++   +K +++    E +   C+ C+ Q   +  + AH+ R H 
Sbjct: 275 TGEKPYKCEECSK-QFSQSGSLKTHMRTHTGE-KPFNCEECSRQFGRLDCLMAHI-RTHT 331

Query: 204 QNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAH--EY 261
                + C KC  + +    LG H +T      + C+EC   F+      SH+R+H  E 
Sbjct: 332 -GEKPFKCDKCGMQFRKLGHLGTHMRTHTGEKKYRCEECSRQFSELGSLKSHMRSHTGEK 390

Query: 262 TEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEA--GHFTWNC 319
              CE C+++    + +  H         + C++CS    T     EH     G   + C
Sbjct: 391 PYTCEECSKQFSELSHLKTHMRTHTGEKPYRCEECSRQFSTMNGLKEHMRTHTGEKPYCC 450

Query: 320 EHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIE-PDLSPDLQKEELVRE-T 377
           E C    SK+   L  LK+H+    RT        T E P +  + S   +    ++E  
Sbjct: 451 EEC----SKQFRCLGDLKKHM----RTH-------TGEKPYKCEECSKQFRHLCSLKEHM 495

Query: 378 RSMKMYDNYKCNICDCFFKTHSILEDHMK------------ALHSFPCDKCDYVGGNLSM 425
           R+      Y C +C   F + S ++ H +            A  SF C++C      LS 
Sbjct: 496 RTHTGEKPYTCEVCSKKFSSLSNMKSHQRNRAEEEAAPKQSAAKSFLCEECSRQFSQLSH 555

Query: 426 LTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEK 485
           L  H  +H  +            +CE CS+ FR    ++ H+   HTG+KPY C  C ++
Sbjct: 556 LKIHMRTHTGEKPY---------KCEECSKQFRMLHHLKTHMHT-HTGEKPYQCEECNKQ 605

Query: 486 FENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK- 544
           F     L+THM + H    PY C  C ++ S+  HL  H +  H            GEK 
Sbjct: 606 FTMPSHLKTHMRT-HTGEKPYKCEECSKQFSRPEHLKTH-MRTH-----------TGEKP 652

Query: 545 YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPL 604
           Y C +CS Q     +L  HM  H+ ++  +C  C ++F R  D     +R H   KP   
Sbjct: 653 YKCEECSKQFSQPGSLKIHMRTHTGEKPFKCEECSKQFGR-VDCLMAHKRTHTGEKPFQC 711

Query: 605 E---MQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPC 661
           E   M+  +   +   M         E +  C+ C R F    Q K+HM  H  ++   C
Sbjct: 712 ERCGMRFRRLGHLGTHMHTHT----GEKKYGCEECSRQFSALDQLKIHMRTHTGEKPYMC 767

Query: 662 KLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQC 721
           + C  R      LK H R H     ++CE+C+  +S   S + HM +H   E+ +MC +C
Sbjct: 768 EECSKRFVAQGDLKKHMRTHTGEKPYKCEECSRQFSMPGSLKRHMQTHTG-EKPYMCGEC 826

Query: 722 DFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKL 756
               S    L  H   H  E  + C+ C  + S L
Sbjct: 827 SKRFSVLADLKKHMRTHTGEKPYKCEECSKQFSSL 861

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	771
ZFIN|ZDB-GENE-071004-105	1014	zgc:173573 "zgc:173573" [Danio	0.892	0.678	0.246	3e-60
ZFIN|ZDB-GENE-110913-135	689	si:ch211-207e19.14 "si:ch211-2	0.738	0.825	0.260	2.2e-57
ZFIN|ZDB-GENE-110914-160	1003	si:dkey-240n22.7 "si:dkey-240n	0.892	0.685	0.230	4e-55
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.883	0.689	0.230	4.1e-55
ZFIN|ZDB-GENE-110913-148	1029	si:dkey-14o6.6 "si:dkey-14o6.6	0.879	0.658	0.246	3e-54
ZFIN|ZDB-GENE-110913-157	981	si:ch211-245n8.1 "si:ch211-245	0.887	0.697	0.251	3e-54
ZFIN|ZDB-GENE-110914-166	1002	si:ch73-266f23.2 "si:ch73-266f	0.880	0.677	0.248	6.6e-54
ZFIN|ZDB-GENE-080213-7	1017	zgc:174234 "zgc:174234" [Danio	0.893	0.677	0.241	8.3e-54
ZFIN|ZDB-GENE-110913-160	846	si:dkey-29p23.3 "si:dkey-29p23	0.904	0.823	0.247	3.1e-53
ZFIN|ZDB-GENE-110913-173	819	si:dkey-78k22.1 "si:dkey-78k22	0.891	0.838	0.242	1.1e-52

ZFIN|ZDB-GENE-071004-105 zgc:173573 "zgc:173573" [Danio rerio (taxid:7955)]

 Score = 555 (200.4 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
 Identities = 190/771 (24%), Positives = 294/771 (38%)

Query:    26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC--TFKGASSQALKYHMHV 83
             RIH  +  F C  C  S   S+N   H+M+HTG KP+ C+HC  +F G SSQ    HM +
Sbjct:   165 RIHTGEKPFTCTQCGKSFSQSSNFNLHMMSHTGEKPFTCTHCGKSF-GQSSQ-FNNHMRI 222

Query:    84 DMLQYLY-----GASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDR 138
                +  +     G SF +  +L+N              +   C    +++ N     N  
Sbjct:   223 HTGEKPFTCTQCGKSFSQLSNLNNHMRIHTGEKPYTCTQ---CGKSFSQLSNL---KNHM 276

Query:   139 IFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAED-LKC-KLCNYQAVNIKGIRA 196
               +   K     P  C +   T      LN    ++  E    C + C         +  
Sbjct:   277 KIHTGEK-----PFTCTQCGKTFNYSSTLNQHMRIHTGEKPFTCTQCCGKSFKQSSNLNL 331

Query:   197 HVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSH 255
             H+ R H      Y+C +C        TL  H +  H G   FTC +C   F+  +    H
Sbjct:   332 HM-RIHTGEK-PYTCTQCGKSFSQAPTLYTHMRI-HTGEKPFTCTQCGRSFSQSQNLQKH 388

Query:   256 IRAH--EYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEHKE- 311
             +  H  E    C  C +       +Y H    H G   + C QC  +       I+H   
Sbjct:   389 MVIHTGERPYTCIQCGKSFSQPPSLYTHM-RIHTGEKPYTCTQCGKSFSQTSHLIKHMRI 447

Query:   312 -AGHFTWNCEHCDFSASKKSVLLSHLKQHV-----------TRVTRTQHMTPDEE--TNE 357
               G   + C  C  S S+   L +H++ H             R +++ H+       T E
Sbjct:   448 HTGEKPFPCTQCGKSFSQSPSLYAHMRIHTGEKPFTCTQCGKRFSQSSHLIKHMRIHTGE 507

Query:   358 IPIE-PDLSPDLQKEELVRETRSMKMYDN---YKCNICDCFFKTHSILEDHMKALHS--- 410
              P           +   + +   MK++     Y C  CD  F     L+ H + +H+   
Sbjct:   508 KPFPCTRCGKSFSRSSHLND--HMKIHTGVKEYMCFECDKTFIKAGELKQHQR-VHTGEK 564

Query:   411 -FPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIAL 469
              + C  C+   G L  L  H+  H    E P        +C  C++ F     ++KH+  
Sbjct:   565 PYECSHCNKRFGGLGTLKKHERIHTG--EKP-------YECSLCNKRFNCTGTLKKHVRT 615

Query:   470 KHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVH 529
              HTG+KPY C  C ++F  S +L  H   +H    PY C  C +  S+ + +++H + +H
Sbjct:   616 -HTGEKPYECSHCNKRFSCSGTLTKHHMRIHTGEKPYMCTQCGKSFSQSSDVNKH-MRIH 673

Query:   530 QKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDN 588
                         GEK ++CTQC     H   L+ HM +H+ ++ + C  C + F++ SD 
Sbjct:   674 T-----------GEKPFTCTQCGKSFSHASTLNQHMKIHTGEKPYMCTQCGKGFNQSSDV 722

Query:   589 NTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKL 648
               H R  H   KP     Q  K    +  +    +    E   TC  C + F        
Sbjct:   723 IKHMRS-HTGEKPFTCT-QCGKSFSQSSNLNKHMWSHTGERPYTCTQCGKSFSQSSDVTK 780

Query:   649 HMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTS 708
             HM  H  ++   C  CG    +   L  H   H     F C +C   + R      HM  
Sbjct:   781 HMWSHTGEKPFTCTQCGKSFSHSSNLNKHTMIHTGEKPFTCTQCGKSFRRSSHLNKHMKI 840

Query:   709 H--NQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLS 757
             H  +  E+ + CTQC  + S    L+ H  +H+ E  F C  C    S+ S
Sbjct:   841 HMTHTGERPYTCTQCGKSFSQSSHLSLHMQMHSGEKPFRCIQCGKSFSQSS 891

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110913-135 si:ch211-207e19.14 "si:ch211-207e19.14" [Danio rerio (taxid:7955)]

 Score = 506 (183.2 bits), Expect = 2.2e-57, Sum P(2) = 2.2e-57
 Identities = 166/637 (26%), Positives = 249/637 (39%)

Query:   151 PDDCPKY-KMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQ---NT 206
             P  C +  K  R+S   LN    ++  E  K   C+ Q V      +H+  KH+      
Sbjct:    39 PFTCTQCGKSFRQSS-SLNYHMMIHAGE--KPFTCS-QCVKSFSCSSHL-NKHMMIHTGE 93

Query:   207 VTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH--EYTE 263
               +SC +C    +  + L  H    H G   FTC +C   F+     + H+R H  E   
Sbjct:    94 KPFSCTQCGKSFRHSLFLKQHMMI-HTGEKPFTCTQCGKSFSQSSSLNHHMRIHTGEKPF 152

Query:   264 QCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEHK--EAGHFTWNCE 320
              C  C +  I  +Q+  H    H G   F C QC  +      F  H     G   + C 
Sbjct:   153 TCTHCGKSFIQSSQLNRHIMI-HTGEKPFTCTQCGKSFSQSSNFNLHMMIHTGEKPFTCT 211

Query:   321 HCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSM 380
             HC  S SK S L  H+  H    +  +  T  +          L+  +      R     
Sbjct:   212 HCGKSFSKSSSLNEHMTIH----SGEKPFTCTQCRKSFSCSSHLNHHM------RIHTGE 261

Query:   381 KMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNSHNSQ 436
             K++    C  C   F+  S L++HM+ +H+    F C +C       S L  H  +H  +
Sbjct:   262 KLFS---CTQCGKSFRRSSSLKEHMR-IHTGEKPFTCTQCGNRFSRSSSLNQHMRTHTGE 317

Query:   437 TEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHM 496
                 P        C  C + + ++S + +H+ + HTG+KP++C  C     N   L+ HM
Sbjct:   318 K---PFT------CTQCGKSYIQSSQLNRHMRI-HTGEKPFTCTECGRSLANKSKLKIHM 367

Query:   497 NSLHALLFPYSCNIC---FRRNSKYT-HLSRH------------KLLVHQKQIDGVGSVE 540
               +H    P++C  C   F R+S    H+  H            K L  + ++     + 
Sbjct:   368 R-IHTGERPFTCTQCGKSFIRSSSLNVHMMSHTGEKPFSCTQCGKSLASKSKLKIHMRIH 426

Query:   541 IGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVL 599
              GE+ ++CTQC        +L+ HM +H+ ++   C  C + FS+ S  N H   +H   
Sbjct:   427 TGERPFTCTQCGKSFSQSSSLNQHMRIHTGEKPFTCTQCEKSFSQSSHLNEHMM-IHTGK 485

Query:   600 KPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRL 659
             KP     Q  K    +  +         E   TC  C + F       LHM  H   +  
Sbjct:   486 KPFTCT-QCRKNFYCSSHLNKHMRIHTGEKPFTCTQCGKSFSRSSSLNLHMRIHTGVKPF 544

Query:   660 PCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCT 719
              C  CG        L LH R H     F C +C   +S   S   HM  H   E+ F CT
Sbjct:   545 TCTRCGKSFNCSSSLNLHMRIHTGEKPFTCTRCGKSFSCSSSLNRHMRIHTG-EKPFTCT 603

Query:   720 QCDFTSSSKDTLNTHAMVHADELKFSCQNC--DFKCS 754
             QC+ + S    LN H M+H     F+C  C  +F CS
Sbjct:   604 QCEKSFSQSSHLNEHMMIHTGRKPFTCTQCRKNFYCS 640

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-160 si:dkey-240n22.7 "si:dkey-240n22.7" [Danio rerio (taxid:7955)]

 Score = 523 (189.2 bits), Expect = 4.0e-55, Sum P(2) = 4.0e-55
 Identities = 173/750 (23%), Positives = 279/750 (37%)

Query:    27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HVD 84
             IH  +  F C  C  S      +K H+  HTG KP++C HC       Q L  HM  H  
Sbjct:    56 IHTGEKPFTCQQCGKSFSQKQTLKVHMRIHTGEKPFSCHHCGKTFTDKQNLMVHMRIHTG 115

Query:    85 MLQYLYGASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIFYANI 144
                Y+       F    +              +   C    N+ +N    H     ++  
Sbjct:   116 DKPYICTVCGKNFSQKPSLDVHVGIHTGEKPYQCQQCGKSFNRKQNL-QVHMS--IHSGD 172

Query:   145 KREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQ 204
             K        C K    R+  ++++++    E +   C  C       + +  H  R H  
Sbjct:   173 KPYQCQ--QCGK-SFNRKQNLQVHMRIHTGE-KPFSCHQCGKSFSQKRNLAIHR-RIHTG 227

Query:   205 NTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH--EY 261
                 Y+C++C      K  L  H +  H G   + C EC   F   +    H+R H  + 
Sbjct:   228 ER-PYTCQQCGKSFTQKQNLKVHMRI-HTGDKPYQCQECGKSFIDKQHLKVHMRIHTGDK 285

Query:   262 TEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQC--SFTTKTPKKFIEHKEAGHFTWNC 319
               QC+ C +    K     H     +   F+C QC  SF  K   K       G   + C
Sbjct:   286 PYQCQQCGKSFNRKQNFQVHMRIHTKEKPFSCHQCGRSFNRKQNLKVHMRVHTGDKPYQC 345

Query:   320 EHCDFSASKKSVLLSHLKQH--VTRVTRTQ-------------HMTPDEETNEIPIEPDL 364
             + C  S S+K+ L +H++ H  +   T  Q             HM           +   
Sbjct:   346 QQCGKSFSQKATLDAHMRTHSGLNAFTCQQCGKSFGQKQKLQLHMRIHSREKPYKCQHCG 405

Query:   365 SPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVG 420
                 QK  L    R       Y C  C   F     L+ H++ +HS    + C  C    
Sbjct:   406 ESFSQKAHLTGHERVHTKEKPYTCLQCGKCFSLKQNLKLHVR-IHSGEKPYQCQHCGKSF 464

Query:   421 GNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCY 480
                S LT H   H  +    P        C+ C + F + + ++ H+ + HT ++PY+C 
Sbjct:   465 NQRSHLTGHTRIHTGEK---PF------SCQQCGKSFAQQTNLKVHMRV-HTRERPYTCQ 514

Query:   481 LCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVE 540
              C ++F + ++L+ HM  +H    PY C  C +  S+ T+L  H           +G+  
Sbjct:   515 DCGKRFFHKQNLKVHMR-VHTGEKPYVCQQCGKSFSQKTNLDAH-----------MGTHS 562

Query:   541 IGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLK 600
             +   + C QC     HK  L  HM +H+ ++ + C  C + F +      H R +H   K
Sbjct:   563 VVNPFICQQCGKSFGHKQNLKIHMRVHTGEKPYSCGQCGKSFRQYPSLKIHVR-IHTGEK 621

Query:   601 PTPLEM-QVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRL 659
             P   +     K       ++        E    C  C + F    Q + HMG H      
Sbjct:   622 PYTCQCCDCGKSFNYKQNLEVHRRIHTGEKPYQCRQCGKSFSQKIQLEGHMGVHTGVNPF 681

Query:   660 PCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCT 719
              C+ CG      + LK+H R H     ++C++C   +S++ + + H+  H      F+C 
Sbjct:   682 TCQQCGKSFNRKQNLKVHIRVHTGEKPYQCQQCGKSFSQQKNLDSHLVIHTGANP-FVCQ 740

Query:   720 QCDFTSSSKDTLNTHAMVHADELKFSCQNC 749
             QC  + + K  L  H  +H  E  + C+ C
Sbjct:   741 QCGKSFNHKQNLQVHMRIHTGEKPYQCRQC 770

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 531 (192.0 bits), Expect = 4.1e-55, Sum P(2) = 4.1e-55
 Identities = 175/759 (23%), Positives = 281/759 (37%)

Query:    26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HV 83
             RIH  +  F C  C      S+N+  H+  HTG KP+ C+ C    + S +L YHM  H 
Sbjct:   225 RIHTGEKPFTCTQCGKCFTCSSNLNQHMRIHTGEKPFICTQCGKSFSQSSSLNYHMKFHA 284

Query:    84 DMLQYLY---GASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIF 140
                 +     G SF +  HL+               +   C         TCS + ++  
Sbjct:   285 GEKPFTCTQCGKSFSQSSHLNKHMRIHTGEKPFTCTQCGKCF--------TCSSNLNQHM 336

Query:   141 YANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFR 200
               +   +      C K   ++ + +  ++K    E +   C  C     +   +  H+  
Sbjct:   337 RIHTGEKPFICTQCGK-SFSQSTSLNYHMKIHTGE-KPFTCTQCGKSFSHSANLNQHMII 394

Query:   201 KHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH 259
              H      + C  C        +   H +  H G   F+C +C   F+       H+R H
Sbjct:   395 -HTGER-PFMCTPCGKSFSQLSSFNQHMRI-HTGEKLFSCTQCGKSFSQSSNLILHMRIH 451

Query:   260 --EYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEHK--EAGH 314
               E    C  C +     + +  H    H G   F C QC  +        +H     G 
Sbjct:   452 TGEKPFTCTQCGKSFSQSSNLILHT-RIHTGEKPFTCTQCGKSFSHSSSLNQHMMIHTGE 510

Query:   315 FTWNCEHCDFSASKKSVLLSHLKQHV-------TRVTRT--------QHMTPDEETNEIP 359
               + C  C  S S+   L  H+K H        T+  ++        +HM          
Sbjct:   511 KPFTCTQCGKSFSQSLSLNQHMKIHTGEKPFTCTKCGKSFNQSSYLNKHMRIHTGKRSFT 570

Query:   360 IEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDK 415
                          L +  ++      Y+C+ C       S L+ HM+ +H+    F C +
Sbjct:   571 CTRCGKSFTHSSHLKKHMKNHTAETLYQCSECGKSLANKSKLKIHMR-IHNRVKLFTCTQ 629

Query:   416 CDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDK 475
             C     N + L  H   H  +    P        C  C + F ++S +  H+ + HTG+K
Sbjct:   630 CGKSFSNSANLNQHMRIHTGEK---PFT------CTQCGKSFSQSSNLNLHMRI-HTGEK 679

Query:   476 PYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDG 535
             P++C  C + F  S SL  HM  +H    P++C  C +  S+ + L+     +H +    
Sbjct:   680 PFTCSQCGKSFSQSSSLNLHMR-IHTGEKPFTCTQCGKSFSQSSILN-----IHMRN--- 730

Query:   536 VGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRR 594
                   GEK ++C QC         L+ HM +H+ +    C  C + FS  ++ N H R 
Sbjct:   731 ----HTGEKPFTCLQCGKSFSQSTYLNQHMRIHTGENLFTCTQCGKSFSNSANLNLHMR- 785

Query:   595 VHGVLKP---TPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMG 651
             +H   KP   T       +   + + M+        E   TC  C + F        HM 
Sbjct:   786 IHTGEKPFTCTQCGKSFSQSSNLNIHMRIHT----GEKPFTCSQCGKSFSQSPYLNHHMR 841

Query:   652 FHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQ 711
              H  ++   C  CG        L +H R H     F C +C   +S+  +   HM +H  
Sbjct:   842 IHTGEKPFTCSQCGKSFSKSSNLNIHMRIHTGEKPFTCTQCGTSFSQSSNLNIHMRNHTG 901

Query:   712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD 750
              E+ F C QC  + S   +LN H M+H  E +F C  C+
Sbjct:   902 -EKPFTCLQCGKSFSRSTSLNRHMMIHTGEKEFMCLKCE 939

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-148 si:dkey-14o6.6 "si:dkey-14o6.6" [Danio rerio (taxid:7955)]

 Score = 524 (189.5 bits), Expect = 3.0e-54, Sum P(2) = 3.0e-54
 Identities = 188/763 (24%), Positives = 291/763 (38%)

Query:    26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM 85
             RIH  +  F C  C  S   ++++  H+  HTG KP+ C+ C      S  LK HM +  
Sbjct:   194 RIHTGEKPFTCTQCGKSFRQASSLNKHMRIHTGEKPFTCTQCGISFNCSSYLKQHMRIHT 253

Query:    86 LQYLY-----GASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIF 140
              +  +     G SF+R  HL++              +   C    N+  N  ++H  RI 
Sbjct:   254 GEKPFTCTQCGRSFNRSSHLNHHMRIHTGEKPFTCTQ---CGKSFNRSSNL-NQHI-RI- 307

Query:   141 YANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFR 200
               +   + +    C K    + S +  +++    E +   C  C            H+ R
Sbjct:   308 --HTGEKPITCTLCGK-SFRQSSSLSKHMRTHTGE-KPFTCTQCGKSFSQSSNFNLHM-R 362

Query:   201 KHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH 259
              H      ++C +C    +   +L  H +T H G   FTC +C   FN     + HIR H
Sbjct:   363 IHTGEK-PFTCTQCGKSFRQASSLNKHTRT-HTGEKPFTCTQCGKSFNRSSHLNQHIRIH 420

Query:   260 --EYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCS--FTTKTP-KKFIEHK-EA 312
               E    C  C +     + +Y H    H G   F C QC   F       K I  K   
Sbjct:   421 TGEKPITCTQCGKSFRQSSSLYKHM-RIHTGEKPFTCTQCGKRFNRSANLNKHIHKKIHT 479

Query:   313 GHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEE 372
             G  T+ C  C     K     SHL QH+ R+   +   P   T +     + S  L +  
Sbjct:   480 GKKTFTCTQC----GKSFNCSSHLNQHI-RIHTGEK--PFRCT-QCGKSFNCSSHLNEHM 531

Query:   373 LVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTS 428
             ++           + C  C   F   S L  HMK +H+    + C +C       S L  
Sbjct:   532 MIHTGEKP-----FTCTQCGKSFSKSSSLYRHMK-IHTGEKPYTCTECRKSFSQSSSLNL 585

Query:   429 HQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFEN 488
             H   H  +    P        C  C   F ++S++ +H+ + HTG+KP++C  C + F  
Sbjct:   586 HMRIHTGEK---PFT------CTECGNSFSKSSSLYRHMKI-HTGEKPFTCTECGKSFIQ 635

Query:   489 SESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLL---------------VHQKQI 533
             S  L  HM  +H    P++C  C +     +HL++H ++                 Q  +
Sbjct:   636 SSCLNVHMR-IHTGEKPFTCTQCGKSFIHSSHLNQHLMIHTGEKPFKCPQCGKSFSQSYL 694

Query:   534 DGVGSVEIG-EKYSCTQCSYQTYHKHA-LDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTH 591
                  +  G  +Y C +C  +T+   A L  H  +H+ ++ ++C  C +RF+      TH
Sbjct:   695 KKHMKIHTGVREYMCLECE-KTFITAAELKRHKRIHTGEKPYKCSQCSKRFAHSGTLKTH 753

Query:   592 QRRVH-G--VLKPTPLEM--QVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQW 646
             +R +H G  + K +         +   + L M+        E   TC  C + F      
Sbjct:   754 ER-IHTGEKLYKCSHCNCGKSFNQSSNINLHMRIHT----GEKPFTCTQCRKSFSLLSSL 808

Query:   647 KLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHM 706
               HM  H  ++   C  CG        L  H R H     F C +C   +S   SF  HM
Sbjct:   809 NQHMRIHTGEKPFTCTQCGKSFSLSSSLNRHMRIHTGEKPFTCTQCGKSFSLSSSFNQHM 868

Query:   707 TSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC 749
               H   E+ F CTQC  + S    L  H  +H  E  F C  C
Sbjct:   869 RMHTG-EKPFTCTQCGKSFSQSSHLYNHMRIHTGEKPFICTQC 910

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-110913-157 si:ch211-245n8.1 "si:ch211-245n8.1" [Danio rerio (taxid:7955)]

 Score = 535 (193.4 bits), Expect = 3.0e-54, Sum P(2) = 3.0e-54
 Identities = 190/754 (25%), Positives = 282/754 (37%)

Query:    26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASS-QALKYHM--H 82
             RIH  +  + C  C  S   + N++ H+ THTG + + C+ C  KG S  Q L  HM  H
Sbjct:   250 RIHSGERLYSCPQCGKSCKQNGNLETHMRTHTGERSFICTQCR-KGFSQKQNLTIHMRIH 308

Query:    83 VDMLQYLYGASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIFYA 142
                  Y        FPH  +                  C     K   T S+    +   
Sbjct:   309 TGEKPYTCTECGKGFPHTGSLKHHMISHTGQKPFACAHCG----KSFTTKSKLKIHMIIH 364

Query:   143 NIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKH 202
               ++  +    C K    + S +  +++    E +   C  C         ++ H+ R H
Sbjct:   365 TGEKPFMCTQ-CGK-SFRQASSLNKHMRIHTGE-KPFTCTQCGISFNCSSYLKQHM-RIH 420

Query:   203 LQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH-- 259
                   ++C +C         L DH+   H G   FTC +C   FN     D HIR H  
Sbjct:   421 TGEK-PFTCTQCGRSFNRSSNL-DHHMRIHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTG 478

Query:   260 EYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEHKE--AGHFT 316
             E    C LC +     + +  H    H G   F C QC  +      F  H     G   
Sbjct:   479 EKPITCTLCGKSFRQSSSLSKHM-RTHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKP 537

Query:   317 WNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRE 376
             + C  C  S  + S L  H++ H    T  +  T  +         + S  L +   +R 
Sbjct:   538 FTCTQCGKSFRQASSLNKHMRTH----TGEKPFTCTQCGKSF----NRSSHLNQH--IRI 587

Query:   377 TRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNS 432
                 K      C  C   F+  S L  HM+ +H+    F C +C       S    H   
Sbjct:   588 HTGEKPIT---CTQCGKSFRQSSSLYKHMR-IHTGEKPFTCTQCGKSFSQSSNFNLHMRI 643

Query:   433 HNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESL 492
             H  +    PI       C  C + F ++S++ KH+ + HTG+KP++C  C + F  + SL
Sbjct:   644 HTGEK---PIT------CTQCGKSFHQSSSLYKHMRI-HTGEKPFTCTQCGKSFRQASSL 693

Query:   493 RTHMNSLHALLFPYSCNIC---FRRNSK-YTHLSRHK----LLVHQ-----KQIDGVGS- 538
               HM  +H    P +C  C   FR++S  Y H+  H         Q     +Q   +   
Sbjct:   694 NKHMR-IHTGEKPITCTQCGKSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFRQTSSLNKH 752

Query:   539 --VEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRV 595
               +  GEK ++CTQC         L  HM +H+ ++   C  C R F+R S N  H  R+
Sbjct:   753 MRIHTGEKPFTCTQCGISFNCSSYLKQHMRIHTGEKPFTCTQCGRSFNRSS-NLDHHMRI 811

Query:   596 HGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNT 655
             H   KP     Q  K    +  +         E  +TC +C + F+       HM  H  
Sbjct:   812 HTGEKPFTCT-QCGKSFNRSSNLDQHIRIHTGEKPITCTLCGKSFRQSSSLSKHMRTHTG 870

Query:   656 KRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQT 715
             ++   C  CG        L  H R H     F C +C   + +  S   HM +H   E+ 
Sbjct:   871 EKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPFTCTQCGKSFRQASSLNKHMRTHTG-EKP 929

Query:   716 FMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC 749
             F CTQC  + +    LN H  +H  E    C  C
Sbjct:   930 FTCTQCGKSFNRSSHLNQHIRIHTGEKPIMCTQC 963

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-166 si:ch73-266f23.2 "si:ch73-266f23.2" [Danio rerio (taxid:7955)]

 Score = 524 (189.5 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
 Identities = 189/760 (24%), Positives = 301/760 (39%)

Query:    26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HV 83
             RIH  +  F C  C  S     ++K+H+ THTG KPYNC  C        +L  HM  H 
Sbjct:    83 RIHTGEKPFSCQQCGRSFSQIQSIKHHMKTHTGEKPYNCQQCGKLFTRKTSLNAHMNSHT 142

Query:    84 DMLQYLYGASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIFYAN 143
                          F H  N                  C     +++N    H   I    
Sbjct:   143 GEKPIACDQCGKGFAHKQNLTVHMRVHTGEKPFPCQYCGKRFRQLQNL-KFH---ITAHT 198

Query:   144 IKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHL 203
              ++ +  P  CPK    R+   + +I+    E +   C+ C     +   ++ H+ + H 
Sbjct:   199 GEKPYTCPH-CPK-SFDRKKKCEKHIRVHTGE-KPFACQQCGRSLASKDLLKKHL-KIH- 253

Query:   204 QNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH--E 260
                  Y+C++C         L  H +  H G   +TC +C   +      D H+R H  E
Sbjct:   254 SGERPYTCQECGKSFTETERLRVHMRI-HTGERPYTCSQCGKSYTQKNCLDYHVRIHTGE 312

Query:   261 YTEQCELCNEKVIGK-NQIYFHYYHEHEGYDFNCKQC--SFTTKTPKK--FIEHKEAGHF 315
                 C  C +    + +QI     H  E   F C QC  SF  +   +   I H  A  F
Sbjct:   313 KPYNCTQCGKSFKCRTSQIRHMNIHTGEK-PFACVQCGKSFAQEFHLRNHVICHTGAKPF 371

Query:   316 TWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVR 375
             T  C+ C  S ++K     +LK+H T  T  +    D+       +  LS     + +  
Sbjct:   372 T--CDQCGKSFTRKD----NLKEHKTIHTNDKSFICDQCGKGFTRKDYLS-----QHMKI 420

Query:   376 ETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDKC--DYVG-GNLS--ML 426
              T+ +      +C  C   F   S L+DHM+ +H+      CD+C   +   GN    M 
Sbjct:   421 HTKQIVCP---RCRQCGKQFTLKSNLKDHMR-IHTGENLIKCDECGKSFTRKGNFEKHMR 476

Query:   427 T--------------SHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHT 472
             T              S    HN +  +     +    C+ C + FR+   ++ HI + HT
Sbjct:   477 THTREKPYWCTECGKSFSQKHNLEVHMRIHTGEKPFPCQQCGKRFRQIQNLKLHITI-HT 535

Query:   473 GDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQ 532
             G+KPY+C  C + F   +   THM ++H    P++C  C R  +    L++H + +H + 
Sbjct:   536 GEKPYACPHCPKSFNQKKKCETHM-TIHTGEKPFACQHCGRCLANKDLLNKH-IKIHMED 593

Query:   533 IDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQ 592
                       + ++C  C         L  HM  H+ ++ + C  C + F++++  N H 
Sbjct:   594 ----------KPFTCPPCGKSFTQPQLLKFHMRTHTGEKPYTCSQCGKSFTQKNGLNYHM 643

Query:   593 RRVHGVLKPTPLEMQVEKR---DQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLH 649
             R +H   KP     Q  K    +   LR + +      E   TC  C + F  D   K H
Sbjct:   644 R-IHSGEKPFTCA-QCGKSFIYNTALLRHRKTH---SGEKPFTCGQCGKSFTKDYSLKYH 698

Query:   650 MGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH 709
             +  H  ++   C LCG R      L  H R H +   + C++C  G++RKD    H   H
Sbjct:   699 LISHTGEKPFKCDLCGKRYLRKDNLNQHMRIHNNDKSYVCDQCGKGFTRKDYLSQHTRIH 758

Query:   710 NQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC 749
               KE++F C QC  + + K  LN H + H+ +   +C  C
Sbjct:   759 T-KEKSFKCHQCGKSFAQKSALNAHVIRHSAKSPATCHQC 797

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080213-7 zgc:174234 "zgc:174234" [Danio rerio (taxid:7955)]

 Score = 540 (195.1 bits), Expect = 8.3e-54, Sum P(2) = 8.3e-54
 Identities = 184/761 (24%), Positives = 302/761 (39%)

Query:    26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYH--MHV 83
             R H  +  + C  C        N++ H+  HTG KPY CSHC  + + S  L+ H  +H 
Sbjct:   144 RTHTGEKPYKCSHCDKRFSDGGNLRQHVRIHTGEKPYKCSHCDKRFSDSGLLRQHERVHT 203

Query:    84 DMLQYLYGASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIFYAN 143
                 Y+      RF    N              K   C+    ++     + ++RI +  
Sbjct:   204 GEKPYICSYCDKRFSGGGNLRQHVRIHTGEKPYKCSYCDKRFRQLGGL--KIHERI-HTG 260

Query:   144 IKREHLDPDDCPKY-KMTRESGIKLNIKYDMNEAEDL-KCKLCNYQAVNIKGIRAHVFRK 201
              K     P  C +  K  RES   LN+   ++  E   KC  C    +    ++ H+ R 
Sbjct:   261 EK-----PCTCTQCGKSFRESST-LNVHMLIHTGEKTHKCDQCCKTFLRAADLKGHL-RV 313

Query:   202 HLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH- 259
             H +  + Y C  C    + + +L +H K  H G+  + C EC   F        H R H 
Sbjct:   314 HSKEKL-YPCSVCEKSFRHQRSLRNHQKI-HTGVGEYKCFECEKTFCAAGNLKIHERIHT 371

Query:   260 -EYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEHKEA--GHF 315
              E    C LCN++      +  H    H G   + C  C    +   +  +H+    G  
Sbjct:   372 AEKPYICSLCNKRFSQLAHMKTHAT-VHTGEKPYKCSHCEKRFRRSGEVRQHERTHTGEK 430

Query:   316 TWNCEHCDFSASKKSVLLSHLKQHV-----------TRVTRTQHMTPDEE--TNEIPIEP 362
              + C  C+   S+ +    H + H             R   + ++   E   T E P + 
Sbjct:   431 PYKCSLCNKRFSQIAQKTIHERIHTGEKPYTCSYCDKRFKDSGNLRQHERIHTGEKPYKC 490

Query:   363 D--LSPDL-QKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDK 415
                    L  K  L +  R         C  C         L  HM+ +H+    F C +
Sbjct:   491 SHCCGKSLANKRSLGKHMRIHTGKKPCTCTQCGKSLANKQSLGCHMR-VHTREKPFTCSQ 549

Query:   416 CDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDK 475
             C    G+LS L SH   HN              +C+ C + F R S ++ H+ + HT ++
Sbjct:   550 CGKSFGHLSNLISHMLIHNGD---------KTHKCDQCGKTFLRGSDLKSHLRV-HTKER 599

Query:   476 PYSCYLCEEKFEN-SESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQID 534
             PY C +CE+ F + +E+L+ H   +H    PY C++C +R S++  +  H+  VH     
Sbjct:   600 PYPCSVCEKSFRHQAENLKIH-ERIHTGEKPYICSLCNKRFSQFAQMKSHER-VHT---- 653

Query:   535 GVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
                    GEK Y C+ C  +      L  H  +H+ ++ + C  C  RFS       H +
Sbjct:   654 -------GEKPYKCSHCDKRVSDLGNLRKHERIHTGEKPYMCSHCDTRFSDLGTLKRH-K 705

Query:   594 RVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFH 653
             R+H   KP       ++R +    ++        E   TC  C + F      K H+  H
Sbjct:   706 RIHTGEKPYKCS-HCDRRFRQLGNLQTHERIHTREKPFTCTQCGKTFLRASHLKSHLRVH 764

Query:   654 NTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKE 713
               ++  PC +CG   K+ + L+ HQ+ H     ++C +C   +   +S + H   H   E
Sbjct:   765 TKEKPYPCSVCGKSFKHQRSLRNHQKIHTGVGEYKCFECEKTFCTAESLKIHKRIHTG-E 823

Query:   714 QTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCS 754
             + ++C+ C+   +    + THA VH  E  + C +CD + S
Sbjct:   824 KPYICSLCNNRFNQFAHMKTHARVHTGEKPYKCSHCDKRFS 864

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110913-160 si:dkey-29p23.3 "si:dkey-29p23.3" [Danio rerio (taxid:7955)]

 Score = 511 (184.9 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
 Identities = 193/779 (24%), Positives = 288/779 (36%)

Query:    26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM--HV 83
             R H  +  F+C  C        N+  H+  HTG KPY C+ C  +     +LK+HM  H 
Sbjct:    83 RTHTGERSFICTQCGKGFSQKQNLTIHMRIHTGEKPYTCTECGKRFPHKGSLKHHMISHT 142

Query:    84 DMLQYLY---GASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIF 140
                 +     G SF     L N                D C   +     TC +   +  
Sbjct:   143 GEKPFACAHCGKSFTTKARLMNHTNGHTGTTC------DHCGKSL-----TCKDSIKQHM 191

Query:   141 YANIKREHLDPDDCPK-YKMTRE--SGIKLNIKYDMNEAEDLKCKLCNYQAV-NIKGIRA 196
                +  E     +C K +K  R   + +KL+   + N       K  +++ + N  GI  
Sbjct:   192 KTPLG-ERFRCSECGKVFKHKRSLINHMKLH-NGEKNYPFFQSNKTMHHKYILNTDGI-- 247

Query:   197 HVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHI 256
                ++  +N   + C +C      K  L  H      G  FTC +C   FN     D HI
Sbjct:   248 --LKRRDKNC--FICTQCGKILASKSKLKIHMIIHTGGKPFTCTQCRKSFNRSSHLDQHI 303

Query:   257 RAH--EYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEHKE-- 311
             R H  E    C  C  K   ++  +  +   H G   F C QC  +        +H    
Sbjct:   304 RIHTGEKPFMCTQCG-KSFRQSSSFNKHMRIHTGEKPFTCTQCGISFNCSSYLKQHMRIH 362

Query:   312 AGHFTWNCEHCDFSASKKSVLLSHLKQHV-------TRV----TRTQHMTPDEE--TNEI 358
              G   + C  C  S ++ S L  H++ H        T+      R+ H+       T E 
Sbjct:   363 TGEKPFTCTQCGRSFNRLSHLNHHMRIHTGEKPFTCTQCWKSFNRSSHLDQHIRIHTGEK 422

Query:   359 PIE-PDLSPDL-QKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FP 412
             PI          Q   L +  R       + C  C   F   S    HM+ +H+    F 
Sbjct:   423 PITCTQCGKSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFSQSSSFNLHMR-IHTGVKPFT 481

Query:   413 CDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHT 472
             C +C       S L  H  +H  +    P        C  C + F R+S + +HI + HT
Sbjct:   482 CTQCGKSFRQASSLNKHMRTHTGEK---PFT------CTQCGKSFNRSSTLNQHIRI-HT 531

Query:   473 GDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQ 532
             G+KP +C  C + F  + SL  HM  +H    P++C  C +  S+ ++ + H + +H   
Sbjct:   532 GEKPITCTQCGKSFRQASSLNKHMR-IHTGEKPFTCTQCGKSFSQSSNFNLH-MRIHT-- 587

Query:   533 IDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTH 591
                      GEK ++CTQC          + HM +H+ ++   C  C + F + S  N H
Sbjct:   588 ---------GEKPFTCTQCGKSFIQSSNFNLHMRIHTGEKPFTCTQCGKSFRQASSLNKH 638

Query:   592 QRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMG 651
              R  H   KP     Q  K    + R+         E   TC  C R F        HM 
Sbjct:   639 MR-THTGEKPFTCT-QCGKSFNRSSRLDQHIRIHTREKPFTCTECGRSFNRSSHLNHHMR 696

Query:   652 FHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQ 711
              H  ++   C  CG        L  H R H       C +C   + +  S   HM  H  
Sbjct:   697 IHTGEKPFTCTQCGKSFNRSSTLNQHIRIHTGEKPITCSQCGKSFRQSSSLYKHMRIHTG 756

Query:   712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCV-RNVISQVAQK 769
              E+ F CTQC  + S     N H  +H  E  F+C  C    +K S + R++    A+K
Sbjct:   757 -EKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPFTCTLCGKSFNKSSHLNRHMRIHTAEK 814

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-173 si:dkey-78k22.1 "si:dkey-78k22.1" [Danio rerio (taxid:7955)]

 Score = 555 (200.4 bits), Expect = 1.1e-52, P = 1.1e-52
 Identities = 185/762 (24%), Positives = 290/762 (38%)

Query:    27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDML 86
             IH  +  FMC  C  S   ++++  H+  HTG KP+ C+ C      S  LK HM +   
Sbjct:    47 IHTGEKPFMCTQCGKSFRQASSLNKHMRIHTGEKPFTCTQCGISFNCSSYLKQHMRIHTG 106

Query:    87 QYLY-----GASFDRFPHLSNXXXXXXXXXXXXXVKFDVCNGIINKIENTCSEHNDRIFY 141
             +  +     G SF+R  +L +              +   C    N+  N   + + RI  
Sbjct:   107 EKPFTCTQCGKSFNRSSNLDHHMRIHTGEKPFTCTQ---CGKSFNRSSNL--DQHIRI-- 159

Query:   142 ANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRK 201
              +   + +    C K    + S +  +++    E +   C  C            H+ R 
Sbjct:   160 -HTGEKPITCTLCGK-SFRQSSSLSKHMRIHTGE-KPFTCTQCGKSFSQSSNFNLHM-RI 215

Query:   202 HLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGIS-FTCDECHLCFNTFRRFDSHIRAH- 259
             H      ++C +C    +   +L  H +T H G   FTC +C   FN     + HIR H 
Sbjct:   216 HTGEK-PFTCTQCGKSFRQASSLNKHMRT-HTGEKPFTCTQCGKSFNRSSHLNQHIRIHT 273

Query:   260 -EYTEQCELCNEKVIGKNQIYFHYYHEHEGYD-FNCKQCSFTTKTPKKFIEHKE--AGHF 315
              E    C  C +     + +Y H    H G   F C QC  +      F  H     G  
Sbjct:   274 GEKPITCTQCGKSFRQSSSLYKHM-RIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEK 332

Query:   316 TWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVR 375
                C  C  S  + S L  H++ H    T  +  T  +          L+  ++   +  
Sbjct:   333 PITCTQCGKSFHQSSSLYKHMRIH----TGEKPFTCTQCGKSFHQASSLNKHMR---IHT 385

Query:   376 ETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQN 431
             E + +       C  C   F+  S L  HM+ +H+    F C +C       S L  H  
Sbjct:   386 EEKPIT------CTQCGKSFRQTSSLNKHMR-IHTGEKPFTCTQCGISFNCSSYLKQHMR 438

Query:   432 SHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSES 491
              H  +    P        C  C + F R+S ++ H+ + HTG+KP++C  C + F  S +
Sbjct:   439 IHTGEK---PFT------CTQCGRSFNRSSNLDHHMRI-HTGEKPFTCTQCGKSFNRSSN 488

Query:   492 LRTHMNSLHALLFPYSCNIC---FRRNSKYT-HLSRH------------KLLVHQKQIDG 535
             L  H+  +H    P +C +C   FR++S  + H+  H            K        + 
Sbjct:   489 LDQHIR-IHTGEKPITCTLCGKSFRQSSSLSKHMRTHTGEKPFTCTQCGKSFSQSSNFNL 547

Query:   536 VGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRR 594
                +  GEK ++CTQC        +L+ HM +H+ ++   C  C + F+R S  N H R 
Sbjct:   548 HMRIHTGEKPFTCTQCGKSFRQASSLNKHMRIHTGEKPFTCTQCGKSFNRSSHLNQHIR- 606

Query:   595 VHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHN 654
             +H   KP       +   Q +   K        E   TC  C++ F        HM  H 
Sbjct:   607 IHTGEKPITCTQCGKSFRQSSSLYKHHMRIHTGEKPFTCTQCEKSFNCSSNLNTHMRIHT 666

Query:   655 TKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQ 714
              ++   C  CG        L  H R H     F C +C   +        HM  H  +E+
Sbjct:   667 GEKPFTCTQCGKSFNFSSNLHQHMRIHTGEKPFTCPQCGKSFFHLSHLNRHMMIHT-REK 725

Query:   715 TFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD--FKCS 754
              F CTQC  + +    L+ H  +H  E  F+C  C+  F CS
Sbjct:   726 PFKCTQCGKSFNRSSDLHQHIRIHTGEKPFTCTQCEKSFNCS 767

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	771
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.94
KOG2462|consensus	279		99.93
KOG1074|consensus	958		99.93
KOG3608|consensus	467		99.92
KOG3623|consensus	1007		99.9
KOG3623|consensus	1007		99.89
KOG3576|consensus	267		99.71
KOG3576|consensus	267		99.67
PLN03086	567	PRLI-interacting factor K; Provisional	99.32
PHA00733	128	hypothetical protein	99.15
PLN03086	567	PRLI-interacting factor K; Provisional	99.12
PHA00733	128	hypothetical protein	99.05
KOG1146|consensus	1406		99.04
PHA02768	55	hypothetical protein; Provisional	98.98
PHA02768	55	hypothetical protein; Provisional	98.91
KOG3993|consensus	500		98.84
KOG1146|consensus	1406		98.76
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.76
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.63
PHA00616	44	hypothetical protein	98.57
KOG3993|consensus	500		98.51
PHA00616	44	hypothetical protein	98.3
PHA00732	79	hypothetical protein	98.2
PHA00732	79	hypothetical protein	98.1
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.86
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.77
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.66
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.59
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.44
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.33
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.29
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.28
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.28
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.12
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.02
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.98
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.76
KOG2231|consensus	669		96.56
PRK04860	160	hypothetical protein; Provisional	96.41
smart00355	26	ZnF_C2H2 zinc finger.	96.36
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.34
PRK04860	160	hypothetical protein; Provisional	96.23
KOG2785|consensus	390		96.2
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.2
smart00355	26	ZnF_C2H2 zinc finger.	96.19
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.13
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.12
KOG2231|consensus	669		96.12
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.96
KOG2482|consensus	423		95.83
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.64
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.6
KOG2785|consensus	390		94.95
KOG2482|consensus	423		94.56
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.49
COG5048	467	FOG: Zn-finger [General function prediction only]	94.12
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.65
COG5048	467	FOG: Zn-finger [General function prediction only]	92.15
KOG2893|consensus	341		92.01
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.84
KOG4173|consensus	253		91.79
KOG2893|consensus	341		91.37
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.35
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.54
KOG4173|consensus	253		89.29
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.15
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	88.12
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	87.79
COG4049	65	Uncharacterized protein containing archaeal-type C	87.1
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	80.39

>KOG1074|consensus

Probab=99.95  E-value=8.3e-30  Score=267.58  Aligned_cols=200  Identities=18%  Similarity=0.317  Sum_probs=162.8

Q ss_pred             ceecCCCCcccCChHHHHccccccCCCCCCCCcccccccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCcc
Q psy13090        544 KYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAF  623 (771)
Q Consensus       544 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~  623 (771)
                      +-+|-+|-++..-+++|+.|.++|+||+||+|.+||+.|.++.+|+.|+-. |....+.                     
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~v-Hka~p~~---------------------  662 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSV-HKAKPPA---------------------  662 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccc-cccCccc---------------------
Confidence            478999999999999999999999999999999999999999999999977 5432221                     


Q ss_pred             ccCCCCccccc---cchhhccChHHHHHHHhhccCC-C------------ccccccccccccChhHHHHHHHHhc-----
Q psy13090        624 EMQSESQLTCD---ICDRVFQTDKQWKLHMGFHNTK-R------------RLPCKLCGFRLKNHKQLKLHQRYHL-----  682 (771)
Q Consensus       624 ~~~~~~~~~C~---~C~~~f~~~~~L~~H~~~H~~~-~------------~~~C~~C~~~f~~~~~L~~H~~~H~-----  682 (771)
                          ..++.|+   +|.+.|.+...|..|+++|.+. .            .-+|..|.+.|.....+..++..|.     
T Consensus       663 ----R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~  738 (958)
T KOG1074|consen  663 ----RVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESE  738 (958)
T ss_pred             ----cccccCCchhhhcccccccccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccC
Confidence                2468899   9999999999999999999832 1            2469999999988888888876662     


Q ss_pred             -----------CCC----CccCCcCCccCCCchhHHHHHHHhc--C--------------------CC------------
Q psy13090        683 -----------SSN----LFRCEKCNLGYSRKDSFEYHMTSHN--Q--------------------KE------------  713 (771)
Q Consensus       683 -----------~~~----~~~C~~C~~~F~~~~~L~~H~~~H~--~--------------------~~------------  713 (771)
                                 ++.    +..+..|+..+.....+..+-..+.  .                    .+            
T Consensus       739 ~~~~~~~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~  818 (958)
T KOG1074|consen  739 PDEQMDERTETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEI  818 (958)
T ss_pred             CcccccccccccccccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcC
Confidence                       222    5678888888877666555432220  0                    00            


Q ss_pred             -----------------------------------------------------------CeeecccCCcccCChhHHHHH
Q psy13090        714 -----------------------------------------------------------QTFMCTQCDFTSSSKDTLNTH  734 (771)
Q Consensus       714 -----------------------------------------------------------~~~~C~~C~~~f~~~~~L~~H  734 (771)
                                                                                 ....|.+||+.|.+.++|+.|
T Consensus       819 ~~~~v~~~pvl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH  898 (958)
T KOG1074|consen  819 LAPSVNMDPVLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIH  898 (958)
T ss_pred             CccccccCchhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHh
Confidence                                                                       016799999999999999999


Q ss_pred             HhhccCCCccccCCCCCccchhhhhhhHHHHHhhhc
Q psy13090        735 AMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKT  770 (771)
Q Consensus       735 ~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  770 (771)
                      +++|++++||.|.+|++.|..+.+|+.||. -|+|+
T Consensus       899 ~rTHtg~KPF~C~fC~~aFttrgnLKvHMg-tH~w~  933 (958)
T KOG1074|consen  899 MRTHTGPKPFFCHFCEEAFTTRGNLKVHMG-THMWV  933 (958)
T ss_pred             hhcCCCCCCccchhhhhhhhhhhhhhhhhc-ccccc
Confidence            999999999999999999999999999999 55554

>KOG2462|consensus

Probab=99.94  E-value=4.7e-28  Score=224.87  Aligned_cols=136  Identities=24%  Similarity=0.486  Sum_probs=129.1

Q ss_pred             CCCccccccchhhccChHHHHHHHhhccC---CCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHH
Q psy13090        627 SESQLTCDICDRVFQTDKQWKLHMGFHNT---KRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFE  703 (771)
Q Consensus       627 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~---~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~  703 (771)
                      ....|+|+.||+.+.+.++|.+|..+|-.   .+.+.|++|||.|.+..+|+.|+|+|+  -+++|.+|||.|.+.-.|+
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhh
Confidence            35679999999999999999999999864   678999999999999999999999997  6899999999999999999


Q ss_pred             HHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHH
Q psy13090        704 YHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQ  765 (771)
Q Consensus       704 ~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~  765 (771)
                      -|+|+|+ |||||.|+.|++.|..+++|+.||++|++.++|+|..|+|.|+.++.|.+|...
T Consensus       205 GHiRTHT-GEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  205 GHIRTHT-GEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccccc-CCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999 699999999999999999999999999999999999999999999999999753

>KOG3608|consensus

Probab=99.94  E-value=8.7e-27  Score=220.64  Aligned_cols=231  Identities=20%  Similarity=0.412  Sum_probs=191.7

Q ss_pred             cccC--CCCccCCChhhhhhhHHhhhcc-ccCCCcccccCCc-eec--CCCCcccCChHHHHccccccCCCCCCCCcccc
Q psy13090        506 YSCN--ICFRRNSKYTHLSRHKLLVHQK-QIDGVGSVEIGEK-YSC--TQCSYQTYHKHALDNHMPLHSLDRKHQCPVCL  579 (771)
Q Consensus       506 ~~C~--~C~~~f~~~~~l~~H~~~~h~~-~~~~~~~~~~~~~-~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  579 (771)
                      |.|.  .|+..|.+...+.+|+..+-.- ..+.........+ +.|  ..|.+.+.++..|+.|++.|++++...|+.||
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg  214 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCG  214 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHH
Confidence            4443  3777777777777775433221 1110111111112 556  56999999999999999999999999999999


Q ss_pred             cccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCccccCCCCccccccchhhccChHHHHHHHhhccCCCcc
Q psy13090        580 RRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRL  659 (771)
Q Consensus       580 ~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  659 (771)
                      .-|.++..|..|+++....                            ...+|+|..|.+.|.+...|+.|+..|..  -|
T Consensus       215 ~~F~~~tkl~DH~rRqt~l----------------------------~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~y  264 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQTEL----------------------------NTNSFQCAQCFKRFATEKLLKSHVVRHVN--CY  264 (467)
T ss_pred             HHhccccHHHHHHHhhhhh----------------------------cCCchHHHHHHHHHhHHHHHHHHHHHhhh--cc
Confidence            9999999999999873221                            13479999999999999999999999975  59


Q ss_pred             ccccccccccChhHHHHHHH-HhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeeccc--CCcccCChhHHHHHHh
Q psy13090        660 PCKLCGFRLKNHKQLKLHQR-YHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQ--CDFTSSSKDTLNTHAM  736 (771)
Q Consensus       660 ~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~--C~~~f~~~~~L~~H~~  736 (771)
                      +|+.|+.+....++|..|++ .|...+||+|+.|++.|.+.+.|.+|+.+|.  +..|+|+.  |.++|.+...|.+|++
T Consensus       265 kCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS--~~~y~C~h~~C~~s~r~~~q~~~H~~  342 (467)
T KOG3608|consen  265 KCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS--KTVYQCEHPDCHYSVRTYTQMRRHFL  342 (467)
T ss_pred             cccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc--ccceecCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999999998 6888999999999999999999999999997  57899998  9999999999999998


Q ss_pred             hcc-C--CCccccCCCCCccchhhhhhhHHHHHhh
Q psy13090        737 VHA-D--ELKFSCQNCDFKCSKLSCVRNVISQVAQ  768 (771)
Q Consensus       737 ~H~-~--e~~~~C~~C~~~f~~~~~l~~H~~~~H~  768 (771)
                      .++ |  +.+|.|..|++.|++-.+|-.|++..|.
T Consensus       343 evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  343 EVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            544 4  4579999999999999999999998885

>KOG2462|consensus

Probab=99.93  E-value=3.3e-27  Score=219.26  Aligned_cols=138  Identities=25%  Similarity=0.552  Sum_probs=120.4

Q ss_pred             CCCCCCCcccccccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCccccCCCCccccccchhhccChHHHHH
Q psy13090        569 LDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKL  648 (771)
Q Consensus       569 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~  648 (771)
                      ....|+|+.||+.+.+.++|.+|... |-..                          ...+.+.|++||+.+.+...|+.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~-H~~~--------------------------~s~ka~~C~~C~K~YvSmpALkM  179 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQT-HRSL--------------------------DSKKAFSCKYCGKVYVSMPALKM  179 (279)
T ss_pred             cCCceeccccccccccccccchhhcc-cccc--------------------------cccccccCCCCCceeeehHHHhh
Confidence            34568888888888888889888877 4211                          11456889999999999999999


Q ss_pred             HHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCCh
Q psy13090        649 HMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSK  728 (771)
Q Consensus       649 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~  728 (771)
                      |+++|+  -+++|.+|||.|....-|+-|+|+|||||||.|+.|+++|.++++|+.||++|. +.|+|+|+.|+|+|..+
T Consensus       180 HirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS-~~K~~qC~~C~KsFsl~  256 (279)
T KOG2462|consen  180 HIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS-DVKKHQCPRCGKSFALK  256 (279)
T ss_pred             HhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhc-CCccccCcchhhHHHHH
Confidence            999997  679999999999999999999999999999999999999999999999999998 57899999999999999


Q ss_pred             hHHHHHHh
Q psy13090        729 DTLNTHAM  736 (771)
Q Consensus       729 ~~L~~H~~  736 (771)
                      +.|.+|..
T Consensus       257 SyLnKH~E  264 (279)
T KOG2462|consen  257 SYLNKHSE  264 (279)
T ss_pred             HHHHHhhh
Confidence            99999965

>KOG1074|consensus

Probab=99.93  E-value=9.1e-27  Score=244.88  Aligned_cols=254  Identities=19%  Similarity=0.380  Sum_probs=166.4

Q ss_pred             ccccccchhhccCHHHHHHHHhhccCCCCCcccCcchhhcCCHHHHHHHHHhhhcCC----CccccC---CCCccCCChh
Q psy13090        447 KRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALL----FPYSCN---ICFRRNSKYT  519 (771)
Q Consensus       447 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~----~~~~C~---~C~~~f~~~~  519 (771)
                      +-+|-+|-++..-+++|+.|++ .|+|++||+|.+|++.|+++.+|+.||- +|...    .++.|+   +|.+.|....
T Consensus       605 PNqCiiC~rVlSC~saLqmHyr-tHtGERPFkCKiCgRAFtTkGNLkaH~~-vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYR-THTGERPFKCKICGRAFTTKGNLKAHMS-VHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             ccceeeeeecccchhhhhhhhh-cccCcCccccccccchhccccchhhccc-ccccCccccccccCCchhhhcccccccc
Confidence            4579999999999999999999 7999999999999999999999999997 67543    468899   9999999999


Q ss_pred             hhhhhHHhhhccccCCCccc--ccCCceecCCCCcccCChHHHHcccccc----------------CCCC----CCCCcc
Q psy13090        520 HLSRHKLLVHQKQIDGVGSV--EIGEKYSCTQCSYQTYHKHALDNHMPLH----------------SLDR----KHQCPV  577 (771)
Q Consensus       520 ~l~~H~~~~h~~~~~~~~~~--~~~~~~~C~~C~~~f~~~~~l~~H~~~h----------------~~~~----~~~C~~  577 (771)
                      .|..|+++|-...+++.+..  ..+..-+|..|.+.|.....+..++..|                +++.    +..+..
T Consensus       683 ~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~  762 (958)
T KOG1074|consen  683 TLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENS  762 (958)
T ss_pred             cccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccc
Confidence            99999988775555443222  1222367999999997777776665544                2222    567888


Q ss_pred             cccccCCchhHHHHHHHh--cCCCCCCchhhhhhhhhhHHhhcCCCccccCCCCcc-ccccchhhccChH----------
Q psy13090        578 CLRRFSRQSDNNTHQRRV--HGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQL-TCDICDRVFQTDK----------  644 (771)
Q Consensus       578 C~~~f~~~~~L~~H~~~~--H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~C~~C~~~f~~~~----------  644 (771)
                      |+..+.....+..+-...  +...+.      .+..   ...........+++++. .+.+++..-...-          
T Consensus       763 ~~~~~~~e~~i~~~g~te~asa~~~~------vg~~---s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~  833 (958)
T KOG1074|consen  763 CGRELEGEMAISVRGSTEEASANLDE------VGTV---SAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQE  833 (958)
T ss_pred             cccccCcccccccccchhhhhcChhh------hcCc---cccchhhhhcccCCCCcccccCCCcCCccccccCchhhccc
Confidence            888888776665543221  100000      0000   00000000000111111 2222221111000          


Q ss_pred             ----------------------HHHHHHhhcc--------C--CCccccccccccccChhHHHHHHHHhcCCCCccCCcC
Q psy13090        645 ----------------------QWKLHMGFHN--------T--KRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKC  692 (771)
Q Consensus       645 ----------------------~L~~H~~~H~--------~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  692 (771)
                                            .+..--.+-.        +  .....|.+||+.|.+.++|..|+|+|+++|||.|.+|
T Consensus       834 ~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC  913 (958)
T KOG1074|consen  834 TSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFC  913 (958)
T ss_pred             ccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhh
Confidence                                  0000000000        0  1126799999999999999999999999999999999


Q ss_pred             CccCCCchhHHHHHHHhcC
Q psy13090        693 NLGYSRKDSFEYHMTSHNQ  711 (771)
Q Consensus       693 ~~~F~~~~~L~~H~~~H~~  711 (771)
                      ++.|..+.+|+.||.+|.+
T Consensus       914 ~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  914 EEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             hhhhhhhhhhhhhhccccc
Confidence            9999999999999999874

>KOG3608|consensus

Probab=99.92  E-value=8.4e-25  Score=207.26  Aligned_cols=237  Identities=22%  Similarity=0.435  Sum_probs=184.6

Q ss_pred             cccc--ccchhhccCHHHHHHHHhhccC-----------C-CCC-cccC--cchhhcCCHHHHHHHHHhhhcCCCccccC
Q psy13090        447 KRQC--EYCSQLFRRASAVEKHIALKHT-----------G-DKP-YSCY--LCEEKFENSESLRTHMNSLHALLFPYSCN  509 (771)
Q Consensus       447 ~~~C--~~C~~~f~~~~~L~~H~~~~H~-----------~-~~~-~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  509 (771)
                      .|.|  +.|+..|.+...+..|+. .|.           + ++| +.|.  .|-+.|.+++.|++|++ .|++++...|+
T Consensus       134 ~f~C~WedCe~~F~s~~ef~dHV~-~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r-~Hs~eKvvACp  211 (467)
T KOG3608|consen  134 NFRCGWEDCEREFVSIVEFQDHVV-KHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIR-THSNEKVVACP  211 (467)
T ss_pred             hhccChhhcCCcccCHHHHHHHHH-HhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHH-hcCCCeEEecc
Confidence            3556  458888888888888876 442           1 122 4564  58888999999999988 78888888888


Q ss_pred             CCCccCCChhhhhhhHHhhhccccCCCcccccCCceecCCCCcccCChHHHHccccccCCCCCCCCcccccccCCchhHH
Q psy13090        510 ICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNN  589 (771)
Q Consensus       510 ~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  589 (771)
                      .|+.-|++...|..|.+...                                     -....+|+|..|.+.|.++..|.
T Consensus       212 ~Cg~~F~~~tkl~DH~rRqt-------------------------------------~l~~n~fqC~~C~KrFaTeklL~  254 (467)
T KOG3608|consen  212 HCGELFRTKTKLFDHLRRQT-------------------------------------ELNTNSFQCAQCFKRFATEKLLK  254 (467)
T ss_pred             hHHHHhccccHHHHHHHhhh-------------------------------------hhcCCchHHHHHHHHHhHHHHHH
Confidence            88888888888888876321                                     11234788888888888888888


Q ss_pred             HHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCccccCCCCccccccchhhccChHHHHHHHhh-ccCCCccccccccccc
Q psy13090        590 THQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGF-HNTKRRLPCKLCGFRL  668 (771)
Q Consensus       590 ~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f  668 (771)
                      .|+.++-                                .-|+|+.|+.+....++|..|++. |...+||+|+.|++.|
T Consensus       255 ~Hv~rHv--------------------------------n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c  302 (467)
T KOG3608|consen  255 SHVVRHV--------------------------------NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRC  302 (467)
T ss_pred             HHHHHhh--------------------------------hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhh
Confidence            8888732                                238899999999999999999875 8888999999999999


Q ss_pred             cChhHHHHHHHHhcCCCCccCCc--CCccCCCchhHHHHHHHhcCC--CCeeecccCCcccCChhHHHHHHh-hcc----
Q psy13090        669 KNHKQLKLHQRYHLSSNLFRCEK--CNLGYSRKDSFEYHMTSHNQK--EQTFMCTQCDFTSSSKDTLNTHAM-VHA----  739 (771)
Q Consensus       669 ~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~--~~~~~C~~C~~~f~~~~~L~~H~~-~H~----  739 (771)
                      .+.+.|.+|..+|+ +..|.|+.  |.++|.+...|++|++.++.+  +-+|.|..|++.|++..+|.+|++ .|.    
T Consensus       303 ~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~P  381 (467)
T KOG3608|consen  303 VRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLP  381 (467)
T ss_pred             ccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCC
Confidence            99999999999987 77899987  999999999999999987633  457999999999999999999976 453    


Q ss_pred             -CCCccccCCCCCccch
Q psy13090        740 -DELKFSCQNCDFKCSK  755 (771)
Q Consensus       740 -~e~~~~C~~C~~~f~~  755 (771)
                       |-+.|.=.+|.-.|..
T Consensus       382 sGh~RFtYk~~edG~mR  398 (467)
T KOG3608|consen  382 SGHKRFTYKVDEDGFMR  398 (467)
T ss_pred             CCCCceeeeeccCceee
Confidence             3333444555555544

>KOG3623|consensus

Probab=99.90  E-value=1.9e-23  Score=215.74  Aligned_cols=113  Identities=28%  Similarity=0.575  Sum_probs=99.9

Q ss_pred             ccccccccccccChHHHHHHHhhcCC-----ccCCCCCCCCCCHHHHHHHHHhcCCCCCC----CCccCcCccccccchh
Q psy13090        385 NYKCNICDCFFKTHSILEDHMKALHS-----FPCDKCDYVGGNLSMLTSHQNSHNSQTEV----PPILSKNKRQCEYCSQ  455 (771)
Q Consensus       385 ~~~C~~C~~~f~~~~~L~~H~~~~h~-----~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----~~~~~~~~~~C~~C~~  455 (771)
                      ...|+.|+..+.....|+.|++..|.     |.|.+|.++|..+..|.+|+.+|......    +.....+.|+|..|+|
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            46899999999999999999987764     99999999999999999999999755432    2223347899999999


Q ss_pred             hccCHHHHHHHHhhccCCCCCcccCcchhhcCCHHHHHHHHHh
Q psy13090        456 LFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNS  498 (771)
Q Consensus       456 ~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  498 (771)
                      .|..+-.|+.|++ .|.|++||.|+.|+++|....++..||.+
T Consensus       290 AFKfKHHLKEHlR-IHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLR-IHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhHHHHHhhhe-eecCCCCcCCcccccccccCCcccccccc
Confidence            9999999999999 69999999999999999999999999853

>KOG3623|consensus

Probab=99.89  E-value=1.4e-23  Score=216.64  Aligned_cols=121  Identities=28%  Similarity=0.602  Sum_probs=97.5

Q ss_pred             CccccccchhhccCHHHHHHHHhhccCC-CCCcccCcchhhcCCHHHHHHHHHhhhcCCCccccCCCCccCCChhhhhhh
Q psy13090        446 NKRQCEYCSQLFRRASAVEKHIALKHTG-DKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRH  524 (771)
Q Consensus       446 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  524 (771)
                      ....|++|++.+.....|+.|++..|.. +..|.|.+|.++|+.+..|.+||. .|....+-           ...    
T Consensus       209 qlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~-~hkpg~dq-----------a~s----  272 (1007)
T KOG3623|consen  209 QLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQ-LHKPGGDQ-----------AIS----  272 (1007)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHH-hhcCCCcc-----------ccc----
Confidence            3467999999999999999999877754 456999999999999999999998 55432210           000    


Q ss_pred             HHhhhccccCCCcccccCCceecCCCCcccCChHHHHccccccCCCCCCCCcccccccCCchhHHHHHH
Q psy13090        525 KLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR  593 (771)
Q Consensus       525 ~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  593 (771)
                                 .......++|+|+.||+.|..+..|+.|+|+|.|++||.|+.|++.|.....+..||.
T Consensus       273 -----------ltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  273 -----------LTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             -----------ccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence                       0112334569999999999999999999999999999999999999999999988874

>KOG3576|consensus

Probab=99.71  E-value=3.2e-18  Score=150.07  Aligned_cols=118  Identities=22%  Similarity=0.545  Sum_probs=108.1

Q ss_pred             CCCccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHH
Q psy13090        627 SESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHM  706 (771)
Q Consensus       627 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~  706 (771)
                      +...|.|.+|++.|.-...|.+|++-|...++|.|..||+.|.....|++|+|+|+|.+||+|..|+++|+..-+|..|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            35679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcC----------CCCeeecccCCcccCChhHHHHHHhhccCCCcc
Q psy13090        707 TSHNQ----------KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       707 ~~H~~----------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      +.-+|          .++.|.|+.||++-.....+..|++.|+..-|+
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            87654          246799999999999999999999988776553

>KOG3576|consensus

Probab=99.67  E-value=1.5e-17  Score=145.87  Aligned_cols=112  Identities=17%  Similarity=0.463  Sum_probs=104.3

Q ss_pred             CCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHH
Q psy13090        655 TKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTH  734 (771)
Q Consensus       655 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H  734 (771)
                      +...|.|.+|+|.|.-..-|.+|++-|...+.|-|..||+.|.+--+|++|+|+|+ +.+||+|..|++.|+++-+|..|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rtht-gvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHT-GVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhcccc-CccccchhhhhHHHHhhccHHHH
Confidence            45679999999999999999999999999999999999999999999999999999 69999999999999999999999


Q ss_pred             Hh-hcc----------CCCccccCCCCCccchhhhhhhHHHHHh
Q psy13090        735 AM-VHA----------DELKFSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       735 ~~-~H~----------~e~~~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      ++ +|.          .++.|.|+.||+.-.....+..|+..+|
T Consensus       193 l~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             HHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence            87 554          2567999999999999999999999887

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.32  E-value=2.3e-12  Score=136.92  Aligned_cols=122  Identities=18%  Similarity=0.371  Sum_probs=102.6

Q ss_pred             ccccc--chhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHH
Q psy13090        631 LTCDI--CDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTS  708 (771)
Q Consensus       631 ~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~  708 (771)
                      -.|+.  ||..|. +..|..|         +.|+.|++.|. ...|..|+++|+  +++.|+ ||+.+ .+..|..|+++
T Consensus       434 V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~t  498 (567)
T PLN03086        434 VVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAS  498 (567)
T ss_pred             eeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhc
Confidence            35874  999883 4444444         59999999996 688999999985  899999 99755 67999999999


Q ss_pred             hcCCCCeeecccCCcccCC----------hhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHHHhhhc
Q psy13090        709 HNQKEQTFMCTQCDFTSSS----------KDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKT  770 (771)
Q Consensus       709 H~~~~~~~~C~~C~~~f~~----------~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  770 (771)
                      |. +++++.|+.|++.|..          .+.|..|..+. |.+++.|..||+.+..+. +..|+..+|+|+
T Consensus       499 hC-p~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlrd-m~~H~~~~h~~~  567 (567)
T PLN03086        499 TC-PLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLKE-MDIHQIAVHQKS  567 (567)
T ss_pred             cC-CCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeehh-HHHHHHHhhcCC
Confidence            98 5899999999999952          35899999986 999999999999998665 899999999885

>PHA00733 hypothetical protein

Probab=99.15  E-value=3e-11  Score=104.44  Aligned_cols=54  Identities=17%  Similarity=0.295  Sum_probs=37.9

Q ss_pred             CCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHHHhh
Q psy13090        713 EQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQ  768 (771)
Q Consensus       713 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H~  768 (771)
                      ++||.|+.||+.|.+...|..|++.|  +.+|.|++|++.|.....|..|+.+.|.
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            56777777777777777777777665  3467777777777777777777776663

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.12  E-value=1.5e-10  Score=123.28  Aligned_cols=144  Identities=22%  Similarity=0.430  Sum_probs=110.1

Q ss_pred             eecCCCCcccCChHHHHccccccCCCCCCCCcc--cccccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCc
Q psy13090        545 YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPV--CLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSA  622 (771)
Q Consensus       545 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~  622 (771)
                      -.|+-|...... ..|..|...- .-..-.|+.  |+..|.. ..|                                  
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C-~r~~V~Cp~~~Cg~v~~r-~el----------------------------------  450 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYC-SRHNVVCPHDGCGIVLRV-EEA----------------------------------  450 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhC-CCcceeCCcccccceeec-ccc----------------------------------
Confidence            568888766554 4555776433 223446774  8887732 222                                  


Q ss_pred             cccCCCCccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCC----
Q psy13090        623 FEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSR----  698 (771)
Q Consensus       623 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~----  698 (771)
                           +..+.|+.|++.|. ...|..|+..++  +++.|+ ||+.+ .+..|..|+++|.+++++.|+.|++.|..    
T Consensus       451 -----~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~  520 (567)
T PLN03086        451 -----KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSA  520 (567)
T ss_pred             -----ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccc
Confidence                 23467999999996 688999999985  789999 99765 67999999999999999999999999952    


Q ss_pred             ------chhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHh-hc
Q psy13090        699 ------KDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAM-VH  738 (771)
Q Consensus       699 ------~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~-~H  738 (771)
                            .+.|..|+...  +.+++.|..||+.|..+ .|..|+. .|
T Consensus       521 ~d~~d~~s~Lt~HE~~C--G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        521 MDVRDRLRGMSEHESIC--GSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             cchhhhhhhHHHHHHhc--CCcceEccccCCeeeeh-hHHHHHHHhh
Confidence                  35899999986  58999999999998655 5788865 44

>PHA00733 hypothetical protein

Probab=99.05  E-value=1.7e-10  Score=99.74  Aligned_cols=83  Identities=16%  Similarity=0.247  Sum_probs=54.3

Q ss_pred             CCCccccccccccccChhHHHHH--HH---HhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChh
Q psy13090        655 TKRRLPCKLCGFRLKNHKQLKLH--QR---YHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKD  729 (771)
Q Consensus       655 ~~~~~~C~~C~~~f~~~~~L~~H--~~---~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~  729 (771)
                      ..+++.|.+|++.|.....|..+  ++   .+.+++||.|+.|++.|.+...|..|++.|.   .+|.|++|++.|....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~---~~~~C~~CgK~F~~~~  113 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE---HSKVCPVCGKEFRNTD  113 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC---cCccCCCCCCccCCHH
Confidence            34556666666666665555554  11   2234667777777777777777777777652   3577777777777777


Q ss_pred             HHHHHHhhccC
Q psy13090        730 TLNTHAMVHAD  740 (771)
Q Consensus       730 ~L~~H~~~H~~  740 (771)
                      .|..|+...++
T Consensus       114 sL~~H~~~~h~  124 (128)
T PHA00733        114 STLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHhcC
Confidence            77777765443

>KOG1146|consensus

Probab=99.04  E-value=2.9e-11  Score=135.96  Aligned_cols=104  Identities=19%  Similarity=0.366  Sum_probs=84.8

Q ss_pred             cccccccccccchhhhhhhhhhcCCCCCcccCCCCCccccchhhhccccccccC-------------------------C
Q psy13090        180 KCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHK-------------------------G  234 (771)
Q Consensus       180 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~-------------------------~  234 (771)
                      .|.-|+..+.+...+..|+...+. -.+.|.|+.|+..|+....|..|||..|.                         +
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S-~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~  516 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHS-FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPG  516 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeec-ccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCC
Confidence            345566677777788888766776 45889999999999999999999999662                         2


Q ss_pred             cceecCCCCCcccchhhHHHHHHhc----C-----------------------------------------Ccccccccc
Q psy13090        235 ISFTCDECHLCFNTFRRFDSHIRAH----E-----------------------------------------YTEQCELCN  269 (771)
Q Consensus       235 ~~~~C~~C~~~F~~~~~L~~H~~~H----~-----------------------------------------~~~~C~~C~  269 (771)
                      ++|.|..|..++.++.+|..||+.-    +                                         ..+.|.+|+
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~  596 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCS  596 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhc
Confidence            6799999999999999999998632    0                                         145799999


Q ss_pred             ccccChhhhhhhhcc
Q psy13090        270 EKVIGKNQIYFHYYH  284 (771)
Q Consensus       270 ~~f~~~~~L~~H~~~  284 (771)
                      +...-..+|+.|+..
T Consensus       597 yetniarnlrihmts  611 (1406)
T KOG1146|consen  597 YETNIARNLRIHMTA  611 (1406)
T ss_pred             chhhhhhcccccccc
Confidence            999999999999754

>PHA02768 hypothetical protein; Provisional

Probab=98.98  E-value=1.6e-10  Score=80.61  Aligned_cols=45  Identities=16%  Similarity=0.209  Sum_probs=42.0

Q ss_pred             cccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhh
Q psy13090         33 KFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKY   79 (771)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~   79 (771)
                      -|+|++||+.|+.+++|..|+++|+  +||+|..|++.|+..+.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            4899999999999999999999999  79999999999999888763

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=5.6e-10  Score=77.88  Aligned_cols=44  Identities=16%  Similarity=0.256  Sum_probs=31.7

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhh
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVR  760 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~  760 (771)
                      .|+|+.||+.|++.++|..|+++|+  +||+|..|++.|++.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3677777777777777777777777  5777777777777666653

>KOG3993|consensus

Probab=98.84  E-value=5e-10  Score=110.50  Aligned_cols=141  Identities=16%  Similarity=0.299  Sum_probs=113.5

Q ss_pred             CccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcC-------------------------
Q psy13090        629 SQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLS-------------------------  683 (771)
Q Consensus       629 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-------------------------  683 (771)
                      .-|.|..|...|.+.-.|.+|.-.-.---.|+|+.|+|.|.-..+|..|.|+|--                         
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            3499999999999999999996322222349999999999999999999999831                         


Q ss_pred             --------CCCccCCcCCccCCCchhHHHHHHHhcCCCC-----------------------------------------
Q psy13090        684 --------SNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQ-----------------------------------------  714 (771)
Q Consensus       684 --------~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~-----------------------------------------  714 (771)
                              +..|.|.+|++.|.++..|++|+.+|+..+.                                         
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence                    1249999999999999999999988863211                                         


Q ss_pred             ----eeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHHHhhh
Q psy13090        715 ----TFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQK  769 (771)
Q Consensus       715 ----~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H~~  769 (771)
                          .-.|++|+-.+.++..-..+.+.=..+.-|.|.+|.-.|.+.-.|.+||..-|..
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence                1347778877777777666666666677799999999999999999999988864

>KOG1146|consensus

Probab=98.76  E-value=1.4e-08  Score=115.01  Aligned_cols=58  Identities=21%  Similarity=0.563  Sum_probs=50.9

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHh-h------------------------cCCCCccCCCCcccchhhHHHhhh
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMT-H------------------------TGSKPYNCSHCTFKGASSQALKYH   80 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~-H------------------------~~~~~~~C~~C~~~f~~~~~L~~H   80 (771)
                      -+|+..|-|.|+.|+..|+....|..|||. |                        -+-+||.|..|.+++..+.+|..|
T Consensus       458 ~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsih  537 (1406)
T KOG1146|consen  458 VLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIH  537 (1406)
T ss_pred             eeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHH
Confidence            367778999999999999999999999998 1                        123689999999999999999999


Q ss_pred             hhH
Q psy13090         81 MHV   83 (771)
Q Consensus        81 ~~~   83 (771)
                      |+.
T Consensus       538 lqS  540 (1406)
T KOG1146|consen  538 LQS  540 (1406)
T ss_pred             HHH
Confidence            974

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.76  E-value=3.5e-09  Score=63.17  Aligned_cols=25  Identities=44%  Similarity=0.885  Sum_probs=20.1

Q ss_pred             hHHHHHHhhcCCCCccCCCCcccch
Q psy13090         48 NMKNHIMTHTGSKPYNCSHCTFKGA   72 (771)
Q Consensus        48 ~l~~H~~~H~~~~~~~C~~C~~~f~   72 (771)
                      +|.+||++|+|++||+|++|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4778888888888888888888875

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.63  E-value=1.3e-08  Score=60.64  Aligned_cols=24  Identities=29%  Similarity=0.559  Sum_probs=15.1

Q ss_pred             HHHHHhhccCCCccccCCCCCccc
Q psy13090        731 LNTHAMVHADELKFSCQNCDFKCS  754 (771)
Q Consensus       731 L~~H~~~H~~e~~~~C~~C~~~f~  754 (771)
                      |.+|+++|+|++||.|++|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            566666666666666666666664

...

>PHA00616 hypothetical protein

Probab=98.57  E-value=2.6e-08  Score=65.94  Aligned_cols=40  Identities=8%  Similarity=0.070  Sum_probs=35.5

Q ss_pred             cccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccch
Q psy13090         33 KFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGA   72 (771)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~   72 (771)
                      ||+|+.||+.|...+.|+.|++.|+|++||.|+.==-.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f~   40 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYFR   40 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEEE
Confidence            7999999999999999999999999999999987544443

>KOG3993|consensus

Probab=98.51  E-value=1.4e-08  Score=100.45  Aligned_cols=109  Identities=21%  Similarity=0.387  Sum_probs=68.7

Q ss_pred             cccCCCCCcccCCchhHHHhhh--cCccceecCCCCccccchHHHHHHHhhccccccccccCCCCcccCCCCCCCCCCch
Q psy13090        290 DFNCKQCSFTTKTPKKFIEHKE--AGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPD  367 (771)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~--~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (771)
                      .|.|..|...|.+.-.|.+|.-  ..+..|+|+.|+|.|+-..+|..|.+.|..+........+       |....    
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~-------P~k~~----  335 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSP-------PPKQA----  335 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCC-------Chhhh----
Confidence            4677777777777777777754  5677899999999999999999999999765322210000       00000    


Q ss_pred             hhhHHHHHhh---hcccCCCccccccccccccChHHHHHHHhhcC
Q psy13090        368 LQKEELVRET---RSMKMYDNYKCNICDCFFKTHSILEDHMKALH  409 (771)
Q Consensus       368 ~~~~~~~~~~---~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h  409 (771)
                      ......+.+.   ........|.|.+|++.|.....|+.|..+.+
T Consensus       336 ~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  336 VETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence            0000111110   01122246999999999999999999974443

>PHA00616 hypothetical protein

Probab=98.30  E-value=2.1e-07  Score=61.69  Aligned_cols=33  Identities=15%  Similarity=0.310  Sum_probs=21.5

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      ||+|+.||+.|..++.|..|++.|+|+.||.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            466666666666666666666666666666654

>PHA00732 hypothetical protein

Probab=98.20  E-value=9.1e-07  Score=68.89  Aligned_cols=45  Identities=36%  Similarity=0.713  Sum_probs=21.4

Q ss_pred             cccccccccccChhHHHHHHHH-hcCCCCccCCcCCccCCCchhHHHHHHHh
Q psy13090        659 LPCKLCGFRLKNHKQLKLHQRY-HLSSNLFRCEKCNLGYSRKDSFEYHMTSH  709 (771)
Q Consensus       659 ~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~F~~~~~L~~H~~~H  709 (771)
                      |.|+.||+.|.+..+|+.|++. |.   ++.|+.||+.|.   .|..|+.+.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            4455555555555555555542 32   234555555554   344444443

>PHA00732 hypothetical protein

Probab=98.10  E-value=2.4e-06  Score=66.50  Aligned_cols=48  Identities=23%  Similarity=0.468  Sum_probs=32.8

Q ss_pred             CccCCcCCccCCCchhHHHHHHH-hcCCCCeeecccCCcccCChhHHHHHHhhccC
Q psy13090        686 LFRCEKCNLGYSRKDSFEYHMTS-HNQKEQTFMCTQCDFTSSSKDTLNTHAMVHAD  740 (771)
Q Consensus       686 ~~~C~~C~~~F~~~~~L~~H~~~-H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  740 (771)
                      ||.|+.|++.|.+..+|+.|++. |.    ++.|+.||++|.   .|..|+++..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~----~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT----LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC----CCccCCCCCEeC---ChhhhhcccCC
Confidence            56777777777777777777774 43    246777777776   46677766544

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.86  E-value=2.1e-05  Score=56.85  Aligned_cols=50  Identities=28%  Similarity=0.574  Sum_probs=33.2

Q ss_pred             cccccchhhccCHHHHHHHHhhccCCC-CCcccCcchhhcCCHHHHHHHHHhhh
Q psy13090        448 RQCEYCSQLFRRASAVEKHIALKHTGD-KPYSCYLCEEKFENSESLRTHMNSLH  500 (771)
Q Consensus       448 ~~C~~C~~~f~~~~~L~~H~~~~H~~~-~~~~C~~C~~~f~~~~~L~~H~~~~H  500 (771)
                      |.|++|++ ..+...|..|+...|..+ +.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            66777777 455667777777667664 4577777776544  37777776544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.77  E-value=1.3e-05  Score=57.99  Aligned_cols=51  Identities=18%  Similarity=0.367  Sum_probs=30.6

Q ss_pred             ccccccccccccchhhhhhhhhhcCCCCCcccCCCCCccccchhhhcccccccc
Q psy13090        179 LKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCH  232 (771)
Q Consensus       179 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h  232 (771)
                      |.|+.|++ ..+..+|..|+...|..+.+.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            66777777 44456677776666664445566666666433  26666665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.66  E-value=3e-05  Score=44.92  Aligned_cols=20  Identities=35%  Similarity=0.536  Sum_probs=8.6

Q ss_pred             ecccCCcccCChhHHHHHHh
Q psy13090        717 MCTQCDFTSSSKDTLNTHAM  736 (771)
Q Consensus       717 ~C~~C~~~f~~~~~L~~H~~  736 (771)
                      +|+.|++.|.++..|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHh
Confidence            34444444444444444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.59  E-value=3.1e-05  Score=44.86  Aligned_cols=22  Identities=27%  Similarity=0.756  Sum_probs=12.1

Q ss_pred             ccCCcCCccCCCchhHHHHHHH
Q psy13090        687 FRCEKCNLGYSRKDSFEYHMTS  708 (771)
Q Consensus       687 ~~C~~C~~~F~~~~~L~~H~~~  708 (771)
                      |+|++|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.44  E-value=6.4e-05  Score=63.24  Aligned_cols=73  Identities=15%  Similarity=0.282  Sum_probs=17.2

Q ss_pred             ccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhc
Q psy13090        660 PCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       660 ~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      +|..|+..|.+...|..|+...++-..   + ....+.....+..+++.-.  ...+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~~~~--~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLRKKV--KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccc---c-ccccccccccccccccccc--CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            477777777777777777764443211   1 1122223444444443322  23577777777777777777777743

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.33  E-value=0.00012  Score=42.91  Aligned_cols=23  Identities=35%  Similarity=0.612  Sum_probs=10.2

Q ss_pred             eecccCCcccCChhHHHHHHhhc
Q psy13090        716 FMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      |.|++|++.|.+...|+.|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555554443

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.29  E-value=6.9e-05  Score=71.86  Aligned_cols=75  Identities=17%  Similarity=0.441  Sum_probs=48.2

Q ss_pred             CCCCccCCc--CCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhh
Q psy13090        683 SSNLFRCEK--CNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVR  760 (771)
Q Consensus       683 ~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~  760 (771)
                      ++|||+|++  |+|.+.+...|+.||.--+...+...=+          +-..|.-.-...+||.|++|+|++..+..|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCccce
Confidence            469999976  9999999999999987432111111000          0001111123468888888888888888888


Q ss_pred             hHHHHHh
Q psy13090        761 NVISQVA  767 (771)
Q Consensus       761 ~H~~~~H  767 (771)
                      -|+...|
T Consensus       416 YHr~Hsh  422 (423)
T COG5189         416 YHRKHSH  422 (423)
T ss_pred             ecccccC
Confidence            8876555

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.28  E-value=0.00019  Score=41.98  Aligned_cols=24  Identities=21%  Similarity=0.348  Sum_probs=11.7

Q ss_pred             cccCCCCCccchhhhhhhHHHHHh
Q psy13090        744 FSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       744 ~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      |.|++|++.|.++..|+.|+.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            345555555555555555555544

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.28  E-value=0.00016  Score=60.78  Aligned_cols=73  Identities=18%  Similarity=0.303  Sum_probs=20.6

Q ss_pred             cccccccccccchhhhhhhhhhcCCCCCcccCCCCCccccchhhhccccccccCCcceecCCCCCcccchhhHHHHHHhc
Q psy13090        180 KCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAH  259 (771)
Q Consensus       180 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~C~~C~~~F~~~~~L~~H~~~H  259 (771)
                      +|.+|+..|.+...|..|+...|. -..+     ....+.....|..+++. -....+.|..|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~-~~~~-----~~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHG-FDIP-----DQKYLVDPNRLLNYLRK-KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccc-cccc-----ccccccccccccccccc-ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            488999999999999999877775 2211     12222344445455443 2224689999999999999999999864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.12  E-value=0.00032  Score=42.44  Aligned_cols=24  Identities=38%  Similarity=0.595  Sum_probs=13.1

Q ss_pred             eeecccCCcccCChhHHHHHHhhc
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      ||.|+.|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            355555555555555555555544

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.02  E-value=0.00031  Score=67.50  Aligned_cols=28  Identities=29%  Similarity=0.692  Sum_probs=23.1

Q ss_pred             ccccccccc--cccccccchhhhhhhhhhc
Q psy13090        175 EAEDLKCKL--CNYQAVNIKGIRAHVFRKH  202 (771)
Q Consensus       175 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  202 (771)
                      ++++|+|++  |++.+.+...|+.|++--|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH  375 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGH  375 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccc
Confidence            358999987  9999999999999985444

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.98  E-value=0.0003  Score=42.53  Aligned_cols=25  Identities=28%  Similarity=0.618  Sum_probs=14.2

Q ss_pred             CccCCcCCccCCCchhHHHHHHHhc
Q psy13090        686 LFRCEKCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       686 ~~~C~~C~~~F~~~~~L~~H~~~H~  710 (771)
                      ||+|+.|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3555555555555555555555553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.76  E-value=0.001  Score=45.21  Aligned_cols=41  Identities=20%  Similarity=0.224  Sum_probs=19.8

Q ss_pred             HHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCc
Q psy13090        703 EYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELK  743 (771)
Q Consensus       703 ~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~  743 (771)
                      ..+.+.+...+.|-.|++|+..+.+..+|++|+.++++.+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            44444454456666777777777777777777766655544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231|consensus

Probab=96.56  E-value=0.004  Score=68.16  Aligned_cols=47  Identities=28%  Similarity=0.545  Sum_probs=24.2

Q ss_pred             ccCcchhhcCCHHHHHHHHHhhhcCCCccccCCC------CccCCChhhhhhhHHhhh
Q psy13090        478 SCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC------FRRNSKYTHLSRHKLLVH  529 (771)
Q Consensus       478 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C------~~~f~~~~~l~~H~~~~h  529 (771)
                      .|..|...|-....|.+|++..|     |.|..|      +.-|.....|..|.+..|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            35555556666666655555333     334444      234555555666655444

>PRK04860 hypothetical protein; Provisional

Probab=96.41  E-value=0.0014  Score=59.11  Aligned_cols=41  Identities=17%  Similarity=0.319  Sum_probs=36.3

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHH
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQA   76 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~   76 (771)
                      -||.|. |+.   ...++.+|.++|+|+++|.|..|+..|.....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEecc
Confidence            489998 998   77889999999999999999999999876543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.36  E-value=0.0027  Score=37.78  Aligned_cols=19  Identities=32%  Similarity=0.592  Sum_probs=7.6

Q ss_pred             cccCCcccCChhHHHHHHh
Q psy13090        718 CTQCDFTSSSKDTLNTHAM  736 (771)
Q Consensus       718 C~~C~~~f~~~~~L~~H~~  736 (771)
                      |+.|++.|.+...|..|++
T Consensus         3 C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        3 CPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCcchhCCHHHHHHHHH
Confidence            3334444444444444433

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.34  E-value=0.0039  Score=60.88  Aligned_cols=135  Identities=26%  Similarity=0.478  Sum_probs=94.6

Q ss_pred             cccccc--ccccccChHHHHHHHhhcCC-ccCCCCC---CCCC------CHHHHHHHHHhcCCCCCCCCccCcCcccccc
Q psy13090        385 NYKCNI--CDCFFKTHSILEDHMKALHS-FPCDKCD---YVGG------NLSMLTSHQNSHNSQTEVPPILSKNKRQCEY  452 (771)
Q Consensus       385 ~~~C~~--C~~~f~~~~~L~~H~~~~h~-~~C~~C~---~~f~------~~~~l~~H~~~h~~~~~~~~~~~~~~~~C~~  452 (771)
                      .|.|+.  |.........|..|.+..|. +-|.+|-   +.|.      +...|+.|...-..+..+     +..-.|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GF-----KGHP~C~F  225 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGF-----KGHPLCIF  225 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCccccCc-----CCCchhhh
Confidence            477864  77777778899999998776 6788874   3343      345566665433322111     12235999


Q ss_pred             chhhccCHHHHHHHHhhccCCCCCcccCcchh-------hcCCHHHHHHHHHhhhcCCCccccCC--CC----ccCCChh
Q psy13090        453 CSQLFRRASAVEKHIALKHTGDKPYSCYLCEE-------KFENSESLRTHMNSLHALLFPYSCNI--CF----RRNSKYT  519 (771)
Q Consensus       453 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~-------~f~~~~~L~~H~~~~H~~~~~~~C~~--C~----~~f~~~~  519 (771)
                      |...|-+-..|.+|++..|.     .|-+|++       -|.+-.+|..|.+..|     |.|.+  |.    ..|....
T Consensus       226 C~~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-----y~ct~qtc~~~k~~vf~~~~  295 (493)
T COG5236         226 CKIYFYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH-----YCCTFQTCRVGKCYVFPYHT  295 (493)
T ss_pred             ccceecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcCc-----eEEEEEEEecCcEEEeccHH
Confidence            99999999999999998774     4777765       4888899999987555     44543  32    3688889


Q ss_pred             hhhhhHHhhhccccC
Q psy13090        520 HLSRHKLLVHQKQID  534 (771)
Q Consensus       520 ~l~~H~~~~h~~~~~  534 (771)
                      .|..|+...|.....
T Consensus       296 el~~h~~~~h~~~~~  310 (493)
T COG5236         296 ELLEHLTRFHKVNAR  310 (493)
T ss_pred             HHHHHHHHHhhcccc
Confidence            999999988876543

>PRK04860 hypothetical protein; Provisional

Probab=96.23  E-value=0.0026  Score=57.40  Aligned_cols=40  Identities=20%  Similarity=0.391  Sum_probs=31.7

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhh
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLS  757 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~  757 (771)
                      -+|.|. |+.   ....+++|.++|+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            468887 887   6677888888888888888888888876544

>KOG2785|consensus

Probab=96.20  E-value=0.015  Score=58.32  Aligned_cols=28  Identities=29%  Similarity=0.274  Sum_probs=21.4

Q ss_pred             CccccccccccccChHHHHHHHhhcCCc
Q psy13090        384 DNYKCNICDCFFKTHSILEDHMKALHSF  411 (771)
Q Consensus       384 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~  411 (771)
                      .|-.|-.|++.+.+...-..||...|+|
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~Hgf  192 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGF  192 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCC
Confidence            3467888888888888888888777764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.20  E-value=0.0032  Score=42.88  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=18.2

Q ss_pred             CCCcccccccccchhhhhhHHHHHHhhcCCCC
Q psy13090         30 HKDKFMCYACYYSTYISTNMKNHIMTHTGSKP   61 (771)
Q Consensus        30 ~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   61 (771)
                      .+.|-.||+|+..+++..+|.+|+.++.+.||
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45677777777777777777777766666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.19  E-value=0.0034  Score=37.29  Aligned_cols=23  Identities=26%  Similarity=0.488  Sum_probs=12.4

Q ss_pred             ccccccccchhhhhhHHHHHHhh
Q psy13090         34 FMCYACYYSTYISTNMKNHIMTH   56 (771)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~H   56 (771)
                      |+|+.|+++|.....|..|+++|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34555555555555555555544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.13  E-value=0.004  Score=36.29  Aligned_cols=23  Identities=17%  Similarity=0.570  Sum_probs=13.6

Q ss_pred             cccCCCCCccchhhhhhhHHHHHh
Q psy13090        744 FSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       744 ~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      |+|+.|++..+ ++.|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56666666666 666666666665

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.12  E-value=0.0041  Score=36.24  Aligned_cols=23  Identities=30%  Similarity=0.785  Sum_probs=11.8

Q ss_pred             eecccCCcccCChhHHHHHHhhcc
Q psy13090        716 FMCTQCDFTSSSKDTLNTHAMVHA  739 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~~~H~  739 (771)
                      |+|+.|++... +..|.+|+++|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666665555 555666655543

>KOG2231|consensus

Probab=96.12  E-value=0.012  Score=64.54  Aligned_cols=62  Identities=19%  Similarity=0.378  Sum_probs=40.5

Q ss_pred             cccccccccccChhhhhhhhccccCCCcccCCCCCcccCCchhHHHhhhcCccceecCCCCcc---------ccchHHHH
Q psy13090        263 EQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFS---------ASKKSVLL  333 (771)
Q Consensus       263 ~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~---------f~~~~~L~  333 (771)
                      +.|.+|+..|.-..            ..-.|..| -.|.+...|..|+...|..+.|.+|-..         ..+...|.
T Consensus       100 ~~C~~C~~~~~~~~------------~~~~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~  166 (669)
T KOG2231|consen  100 HSCHICDRRFRALY------------NKKECLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELN  166 (669)
T ss_pred             hhcCccccchhhhc------------ccCCCccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHH
Confidence            57888887664221            02257777 7778888888888877777778777331         23445666


Q ss_pred             HHHh
Q psy13090        334 SHLK  337 (771)
Q Consensus       334 ~H~~  337 (771)
                      .|+.
T Consensus       167 ~h~~  170 (669)
T KOG2231|consen  167 LHLM  170 (669)
T ss_pred             HHHh
Confidence            6654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.96  E-value=0.0075  Score=58.96  Aligned_cols=129  Identities=19%  Similarity=0.367  Sum_probs=92.3

Q ss_pred             cccccc--chhhccChHHHHHHHhhccCCCcccccccc---cccc------ChhHHHHHHHHhcCCCCc----cCCcCCc
Q psy13090        630 QLTCDI--CDRVFQTDKQWKLHMGFHNTKRRLPCKLCG---FRLK------NHKQLKLHQRYHLSSNLF----RCEKCNL  694 (771)
Q Consensus       630 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~---~~f~------~~~~L~~H~~~H~~~~~~----~C~~C~~  694 (771)
                      .|.|+.  |..+...-..|+.|.+.-++  .+.|.+|-   +.|.      ++..|+.|...-..+..|    .|..|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            377765  77776677889999887655  36777773   3443      466777776654333233    5999999


Q ss_pred             cCCCchhHHHHHHHhcCCCCeeecccCCc-------ccCChhHHHHHHhhccCCCccccC--CCC----Cccchhhhhhh
Q psy13090        695 GYSRKDSFEYHMTSHNQKEQTFMCTQCDF-------TSSSKDTLNTHAMVHADELKFSCQ--NCD----FKCSKLSCVRN  761 (771)
Q Consensus       695 ~F~~~~~L~~H~~~H~~~~~~~~C~~C~~-------~f~~~~~L~~H~~~H~~e~~~~C~--~C~----~~f~~~~~l~~  761 (771)
                      .|.+-..|..|+|.-+  |+   |-+|++       -|.+-.+|..|.+.-    -|.|.  .|-    +.|...-.|..
T Consensus       229 ~FYdDDEL~~HcR~~H--E~---ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~k~~vf~~~~el~~  299 (493)
T COG5236         229 YFYDDDELRRHCRLRH--EA---CHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVGKCYVFPYHTELLE  299 (493)
T ss_pred             eecChHHHHHHHHhhh--hh---hhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecCcEEEeccHHHHHH
Confidence            9999999999999876  44   666654       477888999997632    26663  342    56888889999


Q ss_pred             HHHHHhhh
Q psy13090        762 VISQVAQK  769 (771)
Q Consensus       762 H~~~~H~~  769 (771)
                      |+.+.|..
T Consensus       300 h~~~~h~~  307 (493)
T COG5236         300 HLTRFHKV  307 (493)
T ss_pred             HHHHHhhc
Confidence            99999863

>KOG2482|consensus

Probab=95.83  E-value=0.022  Score=55.87  Aligned_cols=188  Identities=19%  Similarity=0.294  Sum_probs=93.8

Q ss_pred             cccccccccccC-hhhhhhhhccccCCCcccCCCCCcccCCchhHHHhhhcCccceecCCCCccccchHHHHHHHhh--c
Q psy13090        263 EQCELCNEKVIG-KNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQ--H  339 (771)
Q Consensus       263 ~~C~~C~~~f~~-~~~L~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~~~f~~~~~L~~H~~~--h  339 (771)
                      .+|-.|+..+.. ++.+..|+...|+-..    .=+.....-..|..|++..-..++|-.|.+.|..+..|+.||+.  |
T Consensus       145 lqClFCn~e~lgnRs~~l~Hlf~~H~lni----GlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~H  220 (423)
T KOG2482|consen  145 LQCLFCNNEGLGNRSEILEHLFHVHGLNI----GLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRH  220 (423)
T ss_pred             eEEEEecchhcccHHHHHHHHHHHhhhcc----CCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccC
Confidence            468888877654 4667777766664220    00011122345677776555567899999999999999999864  3


Q ss_pred             cccccccccC---------------CCCcccCCCCCCCCCC-chhhhHHHHHhhhcccCCCccccccccccccChHHHHH
Q psy13090        340 VTRVTRTQHM---------------TPDEETNEIPIEPDLS-PDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILED  403 (771)
Q Consensus       340 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~  403 (771)
                      ....+....-               ++.......+...+.. .+..-.+...+.   .......|-.|.....+...|..
T Consensus       221 rrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~---a~a~~v~CLfC~~~~en~~~l~e  297 (423)
T KOG2482|consen  221 RRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD---AEALSVVCLFCTNFYENPVFLFE  297 (423)
T ss_pred             cccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC---CCccceEEEeeccchhhHHHHHH
Confidence            2211110000               0000000000000000 000000000000   00112689999999999999999


Q ss_pred             HHhhcCCccC--CCCC--CCCCCHHHHHHHHHhcCCCCCCCCccCcCccccccchhhccCHHHHHHHHh
Q psy13090        404 HMKALHSFPC--DKCD--YVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIA  468 (771)
Q Consensus       404 H~~~~h~~~C--~~C~--~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~  468 (771)
                      ||+.+|.|-=  ..=+  .-|...-.+..-++...           ..-.|..|+-.|.....|..||.
T Consensus       298 Hmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~-----------~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  298 HMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQK-----------KKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             HHHHHHHhhHHhhccccccchhhhhhHHHHHHHHh-----------hccccccccccccCcchhhhhcc
Confidence            9999886310  0001  11111111111111111           22357888888888888888875

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.64  E-value=0.0049  Score=36.36  Aligned_cols=20  Identities=30%  Similarity=0.587  Sum_probs=9.4

Q ss_pred             ecccCCcccCChhHHHHHHh
Q psy13090        717 MCTQCDFTSSSKDTLNTHAM  736 (771)
Q Consensus       717 ~C~~C~~~f~~~~~L~~H~~  736 (771)
                      .|++|++.|.+...|+.|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34444444444444444443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.60  E-value=0.0089  Score=35.22  Aligned_cols=21  Identities=33%  Similarity=0.839  Sum_probs=10.5

Q ss_pred             ccCCcCCccCCCchhHHHHHH
Q psy13090        687 FRCEKCNLGYSRKDSFEYHMT  707 (771)
Q Consensus       687 ~~C~~C~~~F~~~~~L~~H~~  707 (771)
                      |.|++|++.|.+...|+.|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555544

>KOG2785|consensus

Probab=94.95  E-value=0.021  Score=57.48  Aligned_cols=109  Identities=18%  Similarity=0.276  Sum_probs=57.5

Q ss_pred             CCCccccccccccccChHHHHHHHhhcCCccCCCCCCCCCCHHHHHHHHHhcCCCCC-CC-------CccCcCccccccc
Q psy13090        382 MYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTE-VP-------PILSKNKRQCEYC  453 (771)
Q Consensus       382 ~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~-------~~~~~~~~~C~~C  453 (771)
                      ...++.|.+|.+.|.+..+...|++.            ......+..|.+.-.+... ..       ..+..+.-.+..+
T Consensus        65 ~~~~~~c~~c~k~~~s~~a~~~hl~S------------k~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~  132 (390)
T KOG2785|consen   65 AESVVYCEACNKSFASPKAHENHLKS------------KKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKW  132 (390)
T ss_pred             cccceehHHhhccccChhhHHHHHHH------------hhcchhhhhhhccccccchhhhhccccCccccccCCCcccch
Confidence            34678999999999999999999953            2334445555542211111 00       0011111113333


Q ss_pred             hhhccCHHHHHHHHhh-----------ccCCCCCcccCcchhhcCCHHHHHHHHHhhhcC
Q psy13090        454 SQLFRRASAVEKHIAL-----------KHTGDKPYSCYLCEEKFENSESLRTHMNSLHAL  502 (771)
Q Consensus       454 ~~~f~~~~~L~~H~~~-----------~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  502 (771)
                      ............+...           .-....|-.|-.|+..+.+...-..||...|.-
T Consensus       133 ~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~Hgf  192 (390)
T KOG2785|consen  133 YEVDSDEDSSEEEEEDDEEEDIEEDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGF  192 (390)
T ss_pred             hhcccccccchhhccCcchhhhhhccchhcccCCcceeecCCCcccHHHHHHHHhhccCC
Confidence            3333332222222110           001123466888888888888888888766653

>KOG2482|consensus

Probab=94.56  E-value=0.079  Score=52.15  Aligned_cols=52  Identities=25%  Similarity=0.287  Sum_probs=38.3

Q ss_pred             cccCcchhhcCCHHHHHHHHHhhhcCC--------------------------CccccCCCCccCCChhhhhhhHHhh
Q psy13090        477 YSCYLCEEKFENSESLRTHMNSLHALL--------------------------FPYSCNICFRRNSKYTHLSRHKLLV  528 (771)
Q Consensus       477 ~~C~~C~~~f~~~~~L~~H~~~~H~~~--------------------------~~~~C~~C~~~f~~~~~l~~H~~~~  528 (771)
                      ..|-.|.....+...|..||..+|.-.                          ..-.|-.|...|.....|..|+...
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            467778777777888888887777311                          1235888889999999999998743

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.49  E-value=0.02  Score=34.48  Aligned_cols=22  Identities=32%  Similarity=0.534  Sum_probs=19.1

Q ss_pred             ccCCCCcccchhhHHHhhhhhH
Q psy13090         62 YNCSHCTFKGASSQALKYHMHV   83 (771)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~   83 (771)
                      |-|++|++.|.+..+|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7799999999999999999865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.12  E-value=0.026  Score=62.30  Aligned_cols=58  Identities=24%  Similarity=0.363  Sum_probs=53.6

Q ss_pred             CcccccccccchhhhhhHHHHHH--hhcCC--CCccCC--CCcccchhhHHHhhhhhHhHHHHH
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIM--THTGS--KPYNCS--HCTFKGASSQALKYHMHVDMLQYL   89 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~--~H~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~   89 (771)
                      .++.|..|...|+....|.+|.+  .|+++  +|+.|+  .|++.|.+...|..|..+|++-.+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            58999999999999999999999  89999  999999  799999999999999988876543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.65  E-value=0.038  Score=33.20  Aligned_cols=22  Identities=23%  Similarity=0.427  Sum_probs=14.4

Q ss_pred             ccCCCCCccccchhhhcccccc
Q psy13090        209 YSCKKCPFETQFKVTLGDHYKT  230 (771)
Q Consensus       209 ~~C~~C~~~f~~~~~L~~H~~~  230 (771)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.15  E-value=0.032  Score=61.54  Aligned_cols=123  Identities=17%  Similarity=0.291  Sum_probs=88.3

Q ss_pred             CccccccchhhccChHHHHHHHh--hccCC--Cccccc--cccccccChhHHHHHHHHhcCCCCccCCc--CCccCCCch
Q psy13090        629 SQLTCDICDRVFQTDKQWKLHMG--FHNTK--RRLPCK--LCGFRLKNHKQLKLHQRYHLSSNLFRCEK--CNLGYSRKD  700 (771)
Q Consensus       629 ~~~~C~~C~~~f~~~~~L~~H~~--~H~~~--~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~  700 (771)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....|..|...|++..++.+..  +...+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            46899999999999999999999  89999  999999  89999999999999999998877666633  334433332


Q ss_pred             h-----------------------------------HHHHHHHhcC-CCCeeecccCCcccCChhHHHHHHhhccCCCcc
Q psy13090        701 S-----------------------------------FEYHMTSHNQ-KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       701 ~-----------------------------------L~~H~~~H~~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      .                                   +..|...|-. +...+.+..|.+.|.....|..|++.|....++
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence            2                                   2222222210 011355677777777777777777777777766


Q ss_pred             ccCCCCC
Q psy13090        745 SCQNCDF  751 (771)
Q Consensus       745 ~C~~C~~  751 (771)
                      .|..++.
T Consensus       448 ~~~~~~~  454 (467)
T COG5048         448 LCSILKS  454 (467)
T ss_pred             eeccccc
Confidence            6654443

>KOG2893|consensus

Probab=92.01  E-value=0.054  Score=50.22  Aligned_cols=49  Identities=22%  Similarity=0.298  Sum_probs=38.4

Q ss_pred             cccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHHHhhhc
Q psy13090        718 CTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQKT  770 (771)
Q Consensus       718 C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  770 (771)
                      |=+|++.|.....|..|++.    +-|+|.+|-|+..+--.|..|..+||+-|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhket   61 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHKET   61 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhhhh
Confidence            77888888888888887663    34888888888888888888888888754

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.84  E-value=0.12  Score=30.27  Aligned_cols=19  Identities=26%  Similarity=0.380  Sum_probs=10.9

Q ss_pred             ccCCCCcccchhhHHHhhhh
Q psy13090         62 YNCSHCTFKGASSQALKYHM   81 (771)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~   81 (771)
                      ..|++|+++| ....|..|+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHH
Confidence            3566666666 455555554

>KOG4173|consensus

Probab=91.79  E-value=0.12  Score=47.02  Aligned_cols=80  Identities=24%  Similarity=0.460  Sum_probs=50.8

Q ss_pred             Ccccccc--chhhccCHHHHHHHHhhccCCCCCcccCcchhhcCCHHHHHHHHHhhhc---------CCCccccCC--CC
Q psy13090        446 NKRQCEY--CSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHA---------LLFPYSCNI--CF  512 (771)
Q Consensus       446 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~---------~~~~~~C~~--C~  512 (771)
                      ..+.|++  |...|.+....+.|....|+.    .|.+|.+.|.+...|..|+...|.         +...|+|-+  |+
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            4566765  667777777777776555543    477777777777777777766663         233455543  66


Q ss_pred             ccCCChhhhhhhHHhhh
Q psy13090        513 RRNSKYTHLSRHKLLVH  529 (771)
Q Consensus       513 ~~f~~~~~l~~H~~~~h  529 (771)
                      .+|.+...-..|+...|
T Consensus       154 ~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhHHHHhc
Confidence            66666666666665554

>KOG2893|consensus

Probab=91.37  E-value=0.08  Score=49.12  Aligned_cols=54  Identities=28%  Similarity=0.639  Sum_probs=36.2

Q ss_pred             cCcchhhcCCHHHHHHHHHhhhcCCCccccCCCCccCCChhhhhhhHHhhhccccCCCc
Q psy13090        479 CYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVG  537 (771)
Q Consensus       479 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  537 (771)
                      |-+|+..|.....|..|++..     -|+|.||.+..-+-..|..|...+|.+.++.+.
T Consensus        13 cwycnrefddekiliqhqkak-----hfkchichkkl~sgpglsihcmqvhketid~ip   66 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK-----HFKCHICHKKLFSGPGLSIHCMQVHKETIDKIP   66 (341)
T ss_pred             eeecccccchhhhhhhhhhhc-----cceeeeehhhhccCCCceeehhhhhhhhhhccc
Confidence            677777777777776666543     367777777666667777777777766655443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.35  E-value=0.16  Score=29.82  Aligned_cols=18  Identities=28%  Similarity=0.534  Sum_probs=8.7

Q ss_pred             ecccCCcccCChhHHHHHH
Q psy13090        717 MCTQCDFTSSSKDTLNTHA  735 (771)
Q Consensus       717 ~C~~C~~~f~~~~~L~~H~  735 (771)
                      .|+.||+.| ..+.|..|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            355555555 444444444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.54  E-value=0.26  Score=31.68  Aligned_cols=20  Identities=25%  Similarity=0.655  Sum_probs=9.7

Q ss_pred             eecccCCcccCChhHHHHHH
Q psy13090        716 FMCTQCDFTSSSKDTLNTHA  735 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~  735 (771)
                      |.|++|+..|.+...+..|+
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             eEccccCCccCCHHHHHHHH
Confidence            44555555554444444444

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=89.29  E-value=0.22  Score=45.37  Aligned_cols=82  Identities=29%  Similarity=0.643  Sum_probs=50.5

Q ss_pred             cccccc--ccccccChHHHHHHHhhcCCccCCCCCCCCCCHHHHHHHHHhcCCCCCCCCccCcCccccccchhhccCHHH
Q psy13090        385 NYKCNI--CDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASA  462 (771)
Q Consensus       385 ~~~C~~--C~~~f~~~~~L~~H~~~~h~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~C~~C~~~f~~~~~  462 (771)
                      .+.|++  |...|........|..+.|...                                     |.+|.+.|.+...
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~s-------------------------------------Cs~C~r~~Pt~hL  121 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGNS-------------------------------------CSFCKRAFPTGHL  121 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccch-------------------------------------hHHHHHhCCchhh
Confidence            356664  6667777666666665555444                                     5555555555555


Q ss_pred             HHHHHhhcc---------CCCCCcccC--cchhhcCCHHHHHHHHHhhhcCC
Q psy13090        463 VEKHIALKH---------TGDKPYSCY--LCEEKFENSESLRTHMNSLHALL  503 (771)
Q Consensus       463 L~~H~~~~H---------~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~  503 (771)
                      |..|+...|         .|..-|.|-  .|+..|.+...-+.||-..|.-.
T Consensus       122 Ld~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk~P  173 (253)
T KOG4173|consen  122 LDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHKYP  173 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhccCC
Confidence            555554333         344557774  48888888888888877666543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.15  E-value=0.3  Score=31.39  Aligned_cols=22  Identities=18%  Similarity=0.442  Sum_probs=14.2

Q ss_pred             cccCCCCCccchhhhhhhHHHH
Q psy13090        744 FSCQNCDFKCSKLSCVRNVISQ  765 (771)
Q Consensus       744 ~~C~~C~~~f~~~~~l~~H~~~  765 (771)
                      |.|++|++.|.....+..|+..
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             eEccccCCccCCHHHHHHHHCh
Confidence            5566666666666666666553

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=88.12  E-value=0.22  Score=31.56  Aligned_cols=25  Identities=24%  Similarity=0.615  Sum_probs=19.4

Q ss_pred             ccccccccchhhhhhHHHHHHhhcCCCCccCCCCccc
Q psy13090         34 FMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFK   70 (771)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~   70 (771)
                      |+|..||+.+....            .|+.||+|+..
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~~   26 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGAP   26 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCCc
Confidence            78999998876432            78999999753

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=87.79  E-value=0.37  Score=30.55  Aligned_cols=10  Identities=20%  Similarity=0.640  Sum_probs=5.1

Q ss_pred             CccccCCCCC
Q psy13090        742 LKFSCQNCDF  751 (771)
Q Consensus       742 ~~~~C~~C~~  751 (771)
                      .|+.|++||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4455555553

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.10  E-value=0.33  Score=33.77  Aligned_cols=30  Identities=10%  Similarity=0.158  Sum_probs=15.2

Q ss_pred             CCCccccCCCCCccchhhhhhhHHHHHhhh
Q psy13090        740 DELKFSCQNCDFKCSKLSCVRNVISQVAQK  769 (771)
Q Consensus       740 ~e~~~~C~~C~~~f~~~~~l~~H~~~~H~~  769 (771)
                      ||.-+.|+-||.-|....+..+|+...|.|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHhhh
Confidence            444455555555555555555555555443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=80.39  E-value=0.69  Score=39.22  Aligned_cols=26  Identities=23%  Similarity=0.672  Sum_probs=20.3

Q ss_pred             Ccccc----ccccccccChHHHHHHHhhcC
Q psy13090        384 DNYKC----NICDCFFKTHSILEDHMKALH  409 (771)
Q Consensus       384 ~~~~C----~~C~~~f~~~~~L~~H~~~~h  409 (771)
                      ..|.|    ..|+....+...+..|++..|
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            55888    888888888888888886655

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	771
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-11
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-10
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		9e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		5e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		6e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-04
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-04
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		7e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		7e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 78/210 (37%), Gaps = 43/210 (20%)
Query: 505 PYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNH 563
           PY+C  C +  S+  HL+ H+                GEK Y C +C      K  L  H
Sbjct: 21  PYACPECGKSFSRSDHLAEHQR------------THTGEKPYKCPECGKSFSDKKDLTRH 68
Query: 564 MPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAF 623
              H+ ++ ++CP C + FS++++   HQR  H   KP                      
Sbjct: 69  QRTHTGEKPYKCPECGKSFSQRANLRAHQR-THTGEKP---------------------- 105
Query: 624 EMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLS 683
                    C  C + F      + H   H  ++   C  CG        L  HQR H  
Sbjct: 106 -------YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG 158
Query: 684 SNLFRCEKCNLGYSRKDSFEYHMTSHNQKE 713
              ++C +C   +SR+D+   H  +H  K+
Sbjct: 159 EKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 77/206 (37%), Gaps = 36/206 (17%)
Query: 566 LHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEM 625
           L   ++ + CP C + FSR SD+    +R H   KP                        
Sbjct: 15  LEPGEKPYACPECGKSFSR-SDHLAEHQRTHTGEKP------------------------ 49
Query: 626 QSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSN 685
                  C  C + F   K    H   H  ++   C  CG        L+ HQR H    
Sbjct: 50  -----YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEK 104
Query: 686 LFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFS 745
            + C +C   +S+      H  +H   E+ + C +C  + S +D L+TH   H  E  + 
Sbjct: 105 PYACPECGKSFSQLAHLRAHQRTHT-GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK 163
Query: 746 CQNCDFKCSKLSCVRNVISQVAQKTH 771
           C  C    S+    R+ ++ V Q+TH
Sbjct: 164 CPECGKSFSR----RDALN-VHQRTH 184

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F R++ + +HI + HTG KP+ C +C   F  S+ L TH+ + H    P++C+I
Sbjct: 10  ESCDRRFSRSAELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRHKLLVHQKQID 534
           C R+ ++     RH   +H +Q D
Sbjct: 68  CGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F R++ + +HI + HTG KP+ C +C   F  S+ L TH+ + H    P++C+I
Sbjct: 10  ESCDRRFSRSADLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRHKLLVHQKQID 534
           C R+ ++     RH   +H +Q D
Sbjct: 68  CGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F R+  + +HI + HTG KP+ C +C   F  S+ L TH+ + H    P++C+I
Sbjct: 10  ESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRHKLLVHQKQID 534
           C R+ ++     RH   +H +Q D
Sbjct: 68  CGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F ++ ++ +HI + HTG KP+ C +C   F  S+ L TH+ + H    P++C+I
Sbjct: 10  ESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRHKLLVHQKQID 534
           C R+ ++     RH   +H +Q D
Sbjct: 68  CGRKFARSDERKRH-TKIHLRQKD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 683 SSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADEL 742
           SS   +CE C   +SRKD  + HM  H    + + C  CD+ ++   +LN H  +H+DE 
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDER 63
Query: 743 KFSCQNCDF 751
            F CQ C +
Sbjct: 64  PFKCQICPY 72

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F  +S + +HI + HTG KP+ C +C   F  S+ L TH+ + H    P++C+I
Sbjct: 10  ESCDRRFSDSSNLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRHKLLVHQKQID 534
           C R+ ++     RH   +H +Q D
Sbjct: 68  CGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F R+  + +HI + HTG KP+ C +C   F  S+ L TH+ + H    P++C+I
Sbjct: 9   ESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDI 66
Query: 511 CFRRNSKYTHLSRH 524
           C R+ ++     RH
Sbjct: 67  CGRKFARSDERKRH 80

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 450 CEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLF-PYSC 508
           CE C ++FR    + +H  L H+G+KPYSC +C  +F+  + +  H+ S    +  PY C
Sbjct: 10  CEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 509 NICFRRNSKYTHLSRHKLLVHQKQIDG 535
             C +  S+  HL+ H   VH     G
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVHSGPSSG 95

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 626 QSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSS- 684
              S + C+IC ++F+       H   H+ ++   C +CG R K   ++  H R H  S 
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 685 -NLFRCEKCNLGYSRKDSFEYHM 706
              + C+ C  G+SR D    H+
Sbjct: 63  GKPYICQSCGKGFSRPDHLNGHI 85

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 659 LPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQK-EQTFM 717
           + C++CG   ++   L  H+  H     + C  C L + RKD   YH+ SH+    + ++
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 718 CTQCDFTSSSKDTLNTH 734
           C  C    S  D LN H
Sbjct: 68  CQSCGKGFSRPDHLNGH 84

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSC 508
           +C  C + F ++S ++KH    HTG+KPY C  C + F  S  L+ H  + H    PY C
Sbjct: 6   KCPECGKSFSQSSNLQKHQRT-HTGEKPYKCPECGKSFSQSSDLQKHQRT-HTGEKPYKC 63
Query: 509 NICFRRNSKYTHLSRHK 525
             C +  S+  HLSRH+
Sbjct: 64  PECGKSFSRSDHLSRHQ 80

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 33/86 (38%)
Query: 628 ESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLF 687
           E    C  C + F      + H   H  ++   C  CG        L+ HQR H     +
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 688 RCEKCNLGYSRKDSFEYHMTSHNQKE 713
           +C +C   +SR D    H  +H  K+
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F R+  + +HI + HTG KP+ C +C   F  S+ L TH+ + H    P++C+I
Sbjct: 10  ESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRH 524
           C R+ ++     RH
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F + + ++ HI + HTG KP+ C +C   F    SL  H+ + H    P++C+I
Sbjct: 10  ESCDRRFSQKTNLDTHIRI-HTGQKPFQCRICMRNFSQQASLNAHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRHKLLVHQKQID 534
           C R+ +     +RH   +H +Q D
Sbjct: 68  CGRKFATLHTRTRH-TKIHLRQKD 90

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 453 CSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICF 512
           C + F   S  ++H+++ H G +PY C +C +KF+    L  HM  +H  + PY CNIC 
Sbjct: 15  CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICA 72
Query: 513 RR 514
           +R
Sbjct: 73  KR 74

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 674 LKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH--NQKEQTFMCTQCDFTSSSKDTL 731
           LK+H R H     F C KC   Y RK++   H   +  N+ EQ F C+ C  T   +  L
Sbjct: 23  LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL 82
Query: 732 NTHAMVHADELKFSCQNCD 750
             H + H  E+ + C +C 
Sbjct: 83  RLHMVSHTGEMPYKCSSCS 101

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 434 NSQTEVPPILSKNKRQCEY--CSQLFRRASAVEKHIALKHTGDKPYSCYL--CEEKFENS 489
           +S +  P +  +    C+Y  C++++ ++S ++ H+   HTG+KPY C    C+ +F  S
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARS 60
Query: 490 ESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRH 524
           + L  H    H    P+ C +C R  S+  HL+ H
Sbjct: 61  DELTRHYRK-HTGAKPFQCGVCNRSFSRSDHLALH 94

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 416 CDYVGGN-----LSMLTSHQNSHNSQTEVPPILSKNKRQCEY--CSQLFRRASAVEKHIA 468
           C Y G N     LS L  H   H  +            QC++  C + F R+  +++H  
Sbjct: 9   CAYPGCNKRYFKLSHLQMHSRKHTGEKPY---------QCDFKDCERRFSRSDQLKRH-Q 58
Query: 469 LKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI--CFRRNSKYTHLSRH 524
            +HTG KP+ C  C+ KF  S+ L+TH  + H    P+SC    C ++ ++   L RH
Sbjct: 59  RRHTGVKPFQCKTCQRKFSRSDHLKTHTRT-HTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           E C + F + + ++ HI + HTG KP+ C +C   F     L  H+ + H    P++C+I
Sbjct: 10  ESCDRRFSQKTNLDTHIRI-HTGQKPFQCRICMRNFSQHTGLNQHIRT-HTGEKPFACDI 67
Query: 511 CFRRNSKYTHLSRHKLLVHQKQID 534
           C R+ +      RH   +H +Q D
Sbjct: 68  CGRKFATLHTRDRH-TKIHLRQKD 90

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 410 SFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIAL 469
           SF C  C       S L++H   H+     P         C+YC + F + S ++KH  +
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYP---------CQYCGKRFHQKSDMKKHTFI 51
Query: 470 KHTGDKPYSCYLCEEKFENSESLRTH 495
            HTG+KP+ C +C + F  S +L TH
Sbjct: 52  -HTGEKPHKCQVCGKAFSQSSNLITH 76

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 654 NTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKE 713
            TK+   CK CG        L +H+R H     + C+ C+  + R+D    H   H+ KE
Sbjct: 13  KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS-KE 71
Query: 714 QTFMCTQCDFTSSSKDTLNTHAMVH 738
           + F C +C        TL  H  +H
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKTLH 96

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 395 FKTHSILEDHMKALHSFPCDKCDYVG-----GNLSMLTSHQNSHNSQTEVPPILSKNKRQ 449
           FK   +L  HM+        KC + G       L  L +H  SH  +    P + ++   
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEK---PYMCEH--- 102
Query: 450 CEYCSQLFRRASAVEKHIALKHTGDKPYSCYL--CEEKFENSESLRTHMNSLHA 501
            E CS+ F  AS   KH    H+ +KPY C L  C +++ +  SLR H+ ++H 
Sbjct: 103 -EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	771
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	3e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-04

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 62.5 bits (153), Expect = 6e-12
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 17/130 (13%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC---FRRNSKYTHLSRHKLL 527
            +G     C  C +KF +   L+ H    H    P+ C  C   + R           LL
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKE--------NLL 52

Query: 528 VHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQS 586
            H+ +      +   E+ ++C+ C      +  L  HM  H+ +  ++C  C ++F ++ 
Sbjct: 53  EHEAR----NCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKK 108

Query: 587 DNNTHQRRVH 596
           D  +H  ++H
Sbjct: 109 DLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 386 YKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNSHNSQTEVPP 441
            +C  C   F +   L+ H +  H+    F C KC         L  H+  +        
Sbjct: 8   VECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66

Query: 442 ILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLH 500
                   C  C + FRR   +  H+   HTG+ PY C  C ++F   + L++HM  LH
Sbjct: 67  F------TCSVCQETFRRRMELRLHMVS-HTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 661 CKLCG--FRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHN--QKEQTF 716
           C  C   F  K +  LK+H R H     F C KC   Y RK++   H   +   + EQ F
Sbjct: 10  CPTCHKKFLSKYY--LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 717 MCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD 750
            C+ C  T   +  L  H + H  E+ + C +C 
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCS 101

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.3 bits (153), Expect = 3e-10
 Identities = 83/607 (13%), Positives = 167/607 (27%), Gaps = 187/607 (30%)

Query: 109 DDGDDGDVKFDVCNGIINKIENTCSE--HNDRIFYANIKREHLDPDDCPKYKMTRESGIK 166
           ++    + KF     +++ I+    +     R++     R + D     KY ++R     
Sbjct: 84  EEVLRINYKF-----LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL 138

Query: 167 LNIKYDMNEAEDLKCKLCNYQAVNIKGIRAH---VFRKH-LQNTVTYSCKKCPFETQFK- 221
                       L+  L   +    K +         K  +   V   C     + +   
Sbjct: 139 -----------KLRQALLELR--PAKNVLIDGVLGSGKTWVALDV---CLSYKVQCKMDF 182

Query: 222 ----VTLGDHYKT----------CHKGISFTCDECHLCFNTFRRFDS-------HIRAHE 260
               + L +               ++             N   R  S        +++  
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 261 YTEQC-----ELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHF 315
           Y E C      + N K                 ++ +CK    TT+              
Sbjct: 243 Y-ENCLLVLLNVQNAKAW-------------NAFNLSCKIL-LTTR-------------- 273

Query: 316 TWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDE-----------ETNEIPIE-PD 363
                           L +    H++    +  +TPDE              ++P E   
Sbjct: 274 ---------FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 364 LSPDLQK--EELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGG 421
            +P       E +R+  +   +DN+K   CD   K  +I+E  +  L      K  +   
Sbjct: 325 TNPRRLSIIAESIRDGLA--TWDNWKHVNCD---KLTTIIESSLNVLEPAEYRKM-FD-- 376

Query: 422 NLSMLTSHQNSHNSQTEVPP-ILS-----KNKRQCEYCSQLFRRASAVEKHIALKHTGDK 475
            LS+     +       +P  +LS       K           + S VEK         K
Sbjct: 377 RLSVFPPSAH-------IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ-------PK 422

Query: 476 PYSCYLCEEKFENSESLRTHMNSLHA-LLFPYSCNICFRRNSK---------YTHLSRHK 525
             +  +     E    L  +  +LH  ++  Y+    F  +           Y+H+  H 
Sbjct: 423 ESTISIPSIYLELKVKLE-NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH- 480

Query: 526 LLVHQKQIDGVGSVE--------IGEK--YSCTQCS-----------YQTYHKHALDNHM 564
            L + +  + +            + +K  +  T  +            + Y  +  DN  
Sbjct: 481 -LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539

Query: 565 PLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFE 624
               L         +  F  + + N    +   +L             ++AL  +  A  
Sbjct: 540 KYERLVNA------ILDFLPKIEENLICSKYTDLL-------------RIALMAEDEAIF 580

Query: 625 MQSESQL 631
            ++  Q+
Sbjct: 581 EEAHKQV 587

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 2e-04
 Identities = 67/410 (16%), Positives = 120/410 (29%), Gaps = 105/410 (25%)

Query: 281 HYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVL----LSHL 336
           H++H H  ++    Q  +     K  +   E   F  N +  D     KS+L    + H+
Sbjct: 1   HHHHHHMDFETGEHQYQY-----KDILSVFEDA-FVDNFDCKDVQDMPKSILSKEEIDHI 54

Query: 337 KQHVTRVTRTQHM-----TPDEETNEIPIEPDLSPDLQ------KEELVRETRSMKMYDN 385
                 V+ T  +     +  EE  +  +E  L  + +      K E  + +   +MY  
Sbjct: 55  IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114

Query: 386 YK---CNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNS--HN-----S 435
            +    N    F K +         L              L  L   +N           
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQ-----------ALLELRPAKNVLIDGVLGSGK 163

Query: 436 QTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTH 495
                 +    K QC+   ++F         + LK+       C   E   E  + L   
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF--------WLNLKN-------CNSPETVLEMLQKLLYQ 208

Query: 496 MNSLHALLFPYSCNICFRRNSKYTHLSR------HK--LLVHQKQIDGVGSVEIGEKYSC 547
           ++        +S NI  R +S    L R      ++  LLV    +  V + +       
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV----LLNVQNAKAWN---- 260

Query: 548 TQCSYQTYHKHALDNHMPLHSLDRKHQCPVCL-RRFSRQSDNNTHQRRVHGVLKPTPLEM 606
                      A +             C + L  RF + +D  +     H  L    + +
Sbjct: 261 -----------AFN-----------LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 607 -QVEKRDQVA--LRMKPSAF--EMQSESQLTCDICDRVFQ----TDKQWK 647
              E +  +   L  +P     E+ + +     I     +    T   WK
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 57.5 bits (140), Expect = 1e-09
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 449 QCEYCSQLFRRASAVEKH--IALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPY 506
            C  C + F R+  + +H      HTG+KPY C  C + F + + L  H    H    PY
Sbjct: 23  ACPECGKSFSRSDHLAEHQRT---HTGEKPYKCPECGKSFSDKKDLTRHQR-THTGEKPY 78

Query: 507 SCNIC---FRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDN 562
            C  C   F + +         L  HQ+          GEK Y+C +C         L  
Sbjct: 79  KCPECGKSFSQRA--------NLRAHQR-------THTGEKPYACPECGKSFSQLAHLRA 123

Query: 563 HMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
           H   H+ ++ ++CP C + FSR+ + +THQR
Sbjct: 124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.8 bits (133), Expect = 1e-08
 Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 25/151 (16%)

Query: 449 QCEYCSQLFRRASAVEKH--IALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPY 506
           +C  C + F     + +H      HTG+KPY C  C + F    +LR H    H    PY
Sbjct: 51  KCPECGKSFSDKKDLTRHQRT---HTGEKPYKCPECGKSFSQRANLRAHQ-RTHTGEKPY 106

Query: 507 SCNIC---FRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDN 562
           +C  C   F + +         L  HQ+          GEK Y C +C      +  L  
Sbjct: 107 ACPECGKSFSQLAH--------LRAHQR-------THTGEKPYKCPECGKSFSREDNLHT 151

Query: 563 HMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
           H   H+ ++ ++CP C + FSR+   N HQR
Sbjct: 152 HQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.9 bits (110), Expect = 1e-05
 Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 26/149 (17%)

Query: 386 YKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNSHNSQTEVPP 441
           YKC  C   F     L  H +  H+    + C +C       + L +HQ +H    E P 
Sbjct: 50  YKCPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTG--EKP- 105

Query: 442 ILSKNKRQCEYCSQLFRRASAVEKH--IALKHTGDKPYSCYLCEEKFENSESLRTHMNSL 499
                   C  C + F + + +  H      HTG+KPY C  C + F   ++L TH    
Sbjct: 106 ------YACPECGKSFSQLAHLRAHQRT---HTGEKPYKCPECGKSFSREDNLHTHQ-RT 155

Query: 500 HALLFPYSCNIC---FRRNSKYTHLSRHK 525
           H    PY C  C   F R      L+ H+
Sbjct: 156 HTGEKPYKCPECGKSFSRRD---ALNVHQ 181

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 23/155 (14%)

Query: 386 YKCNICDCFFKTHSILEDHMKALHS------FPCDKCDYVGGN-----LSMLTSHQNSHN 434
            + + C   F +   L  H+ + H       F C                ML  H   H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 435 SQTEVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSC--YLCEEKFENSESL 492
              E P     +K   E C + + R   ++ H+   HTG+KPY C    C + F N+   
Sbjct: 64  G--EKP-----HKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMCEHEGCSKAFSNASDR 115

Query: 493 RTHMNSLHALLFPYSCNI--CFRRNSKYTHLSRHK 525
             H N  H+   PY C +  C +R +  + L +H 
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 35/160 (21%), Positives = 49/160 (30%), Gaps = 43/160 (26%)

Query: 449 QCEYCSQLFRRASAVEKHIALK--HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPY 506
           + + CSQ F     +  HI  +  H   K + C+                          
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------- 41

Query: 507 SCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCT--QCSYQTYHKHALDNH 563
            C+   R       L  H    H            GEK + CT   C         L  H
Sbjct: 42  -CSRELRPFKAQYMLVVHMR-RH-----------TGEKPHKCTFEGCRKSYSRLENLKTH 88

Query: 564 MPLHSLDRKHQC--PVCLRRFSRQSDNNTHQRRVHGVLKP 601
           +  H+ ++ + C    C + FS  SD   HQ R H   KP
Sbjct: 89  LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP 128

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 39.5 bits (93), Expect = 9e-04
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 17/97 (17%)

Query: 505 PYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKH----- 558
               + C +       L  H    H         +    K + C         +      
Sbjct: 3   DCRWDGCSQEFDSQEQLVHHINSEH---------IHGERKEFVCHWGGCSRELRPFKAQY 53

Query: 559 ALDNHMPLHSLDRKHQCPV--CLRRFSRQSDNNTHQR 593
            L  HM  H+ ++ H+C    C + +SR  +  TH R
Sbjct: 54  MLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR 90

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 542 GEK-YSCTQCSYQTYHKHALDNHMPLHSL---DRKHQCPVCLRRFSRQSDNNTHQRRVHG 597
           G     C  C +    K +L+ H   H+      +  C  C +RF +      H+ + H 
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63

Query: 598 VLKPTPLEM 606
            L   P E 
Sbjct: 64  ALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLF---PYSCNICFRRNSKYTHLSRHKLL 527
            +G     C +C        SL  H    HA       + C  C +R  K   ++ H+  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 528 VH 529
            H
Sbjct: 61  SH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 449 QCEYCSQLFRRASAVEKHIALKHT---GDKPYSCYLCEEKFENSESLRTHMNSLHALLFP 505
           QCE C    R+ +++  H   KH        + C  C ++FE  +S+  H +  H  L  
Sbjct: 9   QCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 506 YSCNIC 511
                 
Sbjct: 68  APQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 46.2 bits (110), Expect = 9e-07
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 2/65 (3%)

Query: 687 FRCEKCNLGYSRKDSFEYHMTSHNQK--EQTFMCTQCDFTSSSKDTLNTHAMVHADELKF 744
            +CE C     +K S  +H   H +      F C  C       D++  H       L  
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 745 SCQNC 749
           + Q  
Sbjct: 68  APQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 661 CKLCGFRLKNHKQLKLHQRYHLSSNL---FRCEKCNLGYSRKDSFEYHMTSHNQKEQTFM 717
           C++CGF  +    L  HQR H  +     F CE C   + + DS   H +  +       
Sbjct: 10  CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

Query: 718 CTQC 721
               
Sbjct: 70  QESS 73

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 50.6 bits (122), Expect = 3e-08
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSC 508
           QC  C + F R+  +  HI   HTG+KP++C +C  KF  S+  + H +  H L  P   
Sbjct: 5   QCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQHIL--PILE 61

Query: 509 NICFRRNSKYTHLSRHK 525
           +      SK  HL    
Sbjct: 62  DKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 41.3 bits (98), Expect = 6e-05
 Identities = 17/95 (17%), Positives = 26/95 (27%), Gaps = 16/95 (16%)

Query: 505 PYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNH 563
           P+ C IC R  S+  HL+ H    H            GEK ++C  C  +         H
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIR-THT-----------GEKPFACDICGRKFARSDERKRH 50

Query: 564 MPLHSLDRKHQCPVCLRRFSRQSDNNTHQR--RVH 596
             +                S+           +  
Sbjct: 51  RDIQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 18/100 (18%)

Query: 475 KPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQID 534
           KP+ C +C   F  S+ L TH+   H    P++C+IC R+ ++     RH+  +      
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHR-DIQ----- 54

Query: 535 GVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKH 573
                          +        + L+N +      +K 
Sbjct: 55  -------HILPILEDKVEELLSKNYHLENEVARL---KKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 38.6 bits (91), Expect = 5e-04
 Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 17/96 (17%)

Query: 386 YKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNSHNSQTEVPP 441
           ++C IC   F     L  H++  H+    F CD C            H++       +P 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQ---HILP- 58

Query: 442 ILSKNKRQCEYCSQLFRRASAVEKHIALK--HTGDK 475
                    +   +L  +   +E  +A      G++
Sbjct: 59  ------ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 37.9 bits (89), Expect = 9e-04
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 46 STNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM 81
          S ++  HI THTG KP+ C  C  K A S   K H 
Sbjct: 16 SDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHM-NSLHALLFPYSCNICFRRNSKYTHLSRHKLLVH 529
             G+  Y C +C   + +  +   H   S    +  Y C  CF+  ++  +++ H  ++H
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 530 Q 530
           +
Sbjct: 65  K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 449 QCEYCSQLFRRASAVEKHI-ALKHTGDKPYSCYLCEEKFENSESLRTHM 496
           +C+ CS+++   S   +H         K Y C  C ++F   +++  H+
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.3 bits (103), Expect = 8e-06
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 542 GEK-YSCTQCSYQTYHKHALDNHM--PLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGV 598
           GE  Y C  CS    H      H         + + CP C + F+R+ +   H + +H +
Sbjct: 7   GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.5 bits (124), Expect = 7e-08
 Identities = 31/160 (19%), Positives = 47/160 (29%), Gaps = 28/160 (17%)

Query: 457 FRRASAVEKHIALK--HTGDKPYSCYLCEEKFENSESLRTHMNSLH--------ALLFPY 506
                 +++ ++ K             C+  F     L TH+   H         + +  
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE 63

Query: 507 SCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCT--QCSYQTYHKHALDNH 563
            C    +       L  H   VH            GEK + C    C         L  H
Sbjct: 64  ECPREGKSFKAKYKLVNHI-RVHT-----------GEKPFPCPFPGCGKIFARSENLKIH 111

Query: 564 MPLHSLDRKHQCPV--CLRRFSRQSDNNTHQRRVHGVLKP 601
              H+ ++  +C    C RRF+  SD   H   VH   K 
Sbjct: 112 KRTHTGEKPFKCEFEGCDRRFANSSDRKKHM-HVHTSDKS 150

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.1 bits (118), Expect = 8e-08
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 542 GEK-YSCTQCSYQTYHKHALDNHMPLHS--LDRKHQCPVCLRRFSRQSDNNTHQRRVHGV 598
           GEK Y C  C  +      +  H+         K  CP C    +R+SD   H R+ H  
Sbjct: 12  GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71

Query: 599 LKP 601
             P
Sbjct: 72  SGP 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.4 bits (111), Expect = 7e-07
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLF-PYSCNICFRRNSKYTHLSRHKLLVH 529
           H+G+KPY CY+C  +F  S +++ H+   H      + C  C    ++ + L  H    H
Sbjct: 10  HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)

Query: 46 STNMKNHIMTHTG--SKPYNCSHCTFKGASSQALKYHM 81
          S  MK HI+         ++C HC    A    L  H+
Sbjct: 28 SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.9 bits (115), Expect = 6e-07
 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 472 TGDKPYSC--YLCEEKFENSESLRTHMNSLHALLFPYSCNI--CFRRNSKYTHLSRHKLL 527
           +  +P+ C    C +++     L+ H    H    PY C+   C RR S+   L RH+  
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQR- 59

Query: 528 VHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQC--PVCLRRFSR 584
            H            G K + C  C  +      L  H   H+ ++   C  P C ++F+R
Sbjct: 60  RH-----------TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR 108

Query: 585 QSDNNTHQR 593
             +   H  
Sbjct: 109 SDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)

Query: 449 QCEY--CSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPY 506
           QC++  C + F R+  +++H   +HTG KP+ C  C+ KF  S+ L+TH  + H    P+
Sbjct: 38  QCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRSDHLKTHTRT-HTGEKPF 95

Query: 507 SCNI--CFRRNSKYTHLSRHK 525
           SC    C ++ ++   L RH 
Sbjct: 96  SCRWPSCQKKFARSDELVRHH 116

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.8 bits (113), Expect = 6e-07
 Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 7/94 (7%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQ 530
            TG   + C  C   ++    L  HMN      +    +     N K     R + L+  
Sbjct: 14  FTGASKFRCKDCSAAYDTLVELTVHMNETGH--YRDDNHETDNNNPKRWSKPRKRSLLEM 71

Query: 531 KQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHM 564
           +  +    V       C  C +       L  HM
Sbjct: 72  EGKEDAQKV-----LKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 4/92 (4%)

Query: 647 KLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQR--YHLSSNLFRCEKCNLGYSRKDSFEY 704
           KL+        +  CK C        +L +H     H   +    +  N     K     
Sbjct: 8   KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRS 67

Query: 705 HMTSH--NQKEQTFMCTQCDFTSSSKDTLNTH 734
            +        ++   C  C  +  S   L+ H
Sbjct: 68  LLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 8e-04
 Identities = 12/95 (12%), Positives = 25/95 (26%), Gaps = 5/95 (5%)

Query: 625 MQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLP-----CKLCGFRLKNHKQLKLHQR 679
               S+  C  C   + T  +  +HM      R             +     + L   + 
Sbjct: 14  FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG 73

Query: 680 YHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQ 714
              +  + +C  C   +        HM      ++
Sbjct: 74  KEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 46.6 bits (112), Expect = 9e-07
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSC 508
           +CE C + F R   ++ H+   HTG KPY C  C+    +S SL  H+  +H+   P+ C
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKC 67

Query: 509 NIC---FRRNSKYTHLSRHK 525
            IC    R +S    L+ H 
Sbjct: 68  QICPYASRNSS---QLTVHL 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.6 bits (104), Expect = 1e-05
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 20/109 (18%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC---FRRNSKYTHLSRHKLL 527
                P+ C +C + F   + L+THM   H  + PY C  C      +S    L++H   
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSS---SLNKHLR- 57

Query: 528 VHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQC 575
           +H             E+ + C  C Y + +   L  H+  H+ D     
Sbjct: 58  IHS-----------DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 41.6 bits (99), Expect = 6e-05
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 15/98 (15%)

Query: 386 YKCNICDCFFKTHSILEDHMKALHS----FPCDKCDYVGGNLSMLTSHQNSHNSQTEVPP 441
           +KC +C   F     L+ HM+  H+    + C  CDY   + S L  H   H   ++  P
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIH---SDERP 64

Query: 442 ILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSC 479
                  +C+ C    R +S +  H+   HTGD   S 
Sbjct: 65  F------KCQICPYASRNSSQLTVHLRS-HTGDSGPSS 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 46.3 bits (111), Expect = 1e-06
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHA--LLFPY 506
            CE C ++FR    + +H    H+G+KPYSC +C  +F+  + +  H+ S H   +  PY
Sbjct: 9   ACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPY 66

Query: 507 SCNIC---FRRNSKYTHLSRHKLLVH 529
            C  C   F R     HL+ H   VH
Sbjct: 67  ICQSCGKGFSRPD---HLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.8 bits (107), Expect = 4e-06
 Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 21/98 (21%)

Query: 505 PYSCNIC---FRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHAL 560
             +C IC   FR      HL+RHKL  H            GEK YSC  C  +   K  +
Sbjct: 7   GVACEICGKIFRDVY---HLNRHKL-SHS-----------GEKPYSCPVCGLRFKRKDRM 51

Query: 561 DNHMPLHS--LDRKHQCPVCLRRFSRQSDNNTHQRRVH 596
             H+  H   + + + C  C + FSR    N H ++VH
Sbjct: 52  SYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 537 GSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
           GS         C++CSY    K AL  H  +H  DR  +C  C     + S+ + H +
Sbjct: 1   GSSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 43.6 bits (104), Expect = 6e-06
 Identities = 13/48 (27%), Positives = 20/48 (41%)

Query: 34 FMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM 81
            C  C YS      ++ H   H   +P+ C++C+F       L  HM
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 470 KHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHK 525
             +   P  C  C     +  +LR H   +H    P+ CN C     + ++LS+H 
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHM 57

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.7 bits (104), Expect = 6e-06
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 450 CEYCSQLFRRASAVEKHIALKHTGDKPYSC--YLCEEKFENSESLRTHMNSLHALLFPYS 507
              C ++F     +  H   +H   K +SC    C + F   + L+ HM  LH+    Y 
Sbjct: 12  FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYI 70

Query: 508 CNIC 511
           C   
Sbjct: 71  CEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 17/85 (20%), Positives = 24/85 (28%), Gaps = 17/85 (20%)

Query: 471 HTGDKPYSCYL--CEEKFENSESLRTHMNSLHALLFPYSCN--ICFRRNSKYTHLSRHKL 526
            +G     C    C   F N + L  H    H     +SC    C +  +   HL  H  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM- 60

Query: 527 LVHQKQIDGVGSVEIGEK-YSCTQC 550
            +H              + Y C   
Sbjct: 61  KLHS-----------DTRDYICEFS 74

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 43.6 bits (104), Expect = 9e-06
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHM 496
           QC  C + F R+  +  HI   HTG+KP++C +C  KF  S+  + H 
Sbjct: 36  QCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHT 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.3 bits (98), Expect = 5e-05
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 15/92 (16%)

Query: 505 PYSCNI--CFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALD 561
           PY+C +  C RR S+   L+RH   +H            G+K + C  C         L 
Sbjct: 4   PYACPVESCDRRFSQSGSLTRHIR-IHT-----------GQKPFQCRICMRNFSRSDHLT 51

Query: 562 NHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
            H+  H+ ++   C +C R+F+R  +   H +
Sbjct: 52  THIRTHTGEKPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 16/96 (16%)

Query: 475 KPYSCYL--CEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQ 532
           +PY+C +  C+ +F  S SL  H+   H    P+ C IC R  S+  HL+ H    H   
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIR-THT-- 58

Query: 533 IDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLH 567
                    GEK ++C  C  +         H  +H
Sbjct: 59  ---------GEKPFACDICGRKFARSDERKRHTKIH 85

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 13/104 (12%)

Query: 395 FKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQC--EY 452
             +     +  + +H      C  V    S L +H  +H    E P        +C  E 
Sbjct: 3   SGSSGPDLEKRR-IHYCDYPGCTKVYTKSSHLKAHLRTHTG--EKP-------YKCTWEG 52

Query: 453 CSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHM 496
           C   F R+  + +H   KHTG KP+ C +C   F  S+ L  HM
Sbjct: 53  CDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 24/106 (22%)

Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSC 508
            C+ C + F   S  ++H+++ H G +PY C +C +KF+    L  HM  +H  + PY C
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYEC 68

Query: 509 NIC---FRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQC 550
           NIC   F          RH   V               K Y   + 
Sbjct: 69  NICAKRFMWRD---SFHRH---VT-----------SCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 41.3 bits (98), Expect = 9e-05
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 23/120 (19%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC---FRRNSKYTHLSRHKLL 527
            +GDK Y C  C + F +      HM S+H  L PY C +C   F+            L+
Sbjct: 5   SSGDKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKH--------HLV 54

Query: 528 VHQKQIDGVGSVEIGEK-YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQS 586
            H K       +  G K Y C  C+ +   + +   H  + S  + ++     +  +  S
Sbjct: 55  GHMK-------IHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEAS 105

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 42.8 bits (100), Expect = 3e-05
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 4/81 (4%)

Query: 671 HKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTS---HNQKEQTFMCTQCDFTSSS 727
           H     +Q+       + C+ C       + F +H+ S   +     +++C +C+F +  
Sbjct: 3   HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62

Query: 728 KDTLNTH-AMVHADELKFSCQ 747
            D L+ H    H  E  F   
Sbjct: 63  YDALSEHNLKYHPGEENFKLT 83

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 27/157 (17%)

Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSC--YLCEEKFENSESLRTHMNSLHAL-LFPYS 507
           E C + F     + +H  L HTG+K ++C    C+ +F    +++ H N  H + +  Y 
Sbjct: 48  EGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYV 106

Query: 508 CNI-----CFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEK-YSCTQ--CSYQTYHKHA 559
           C+       F++++    L  H+   H             +  Y C    C  +      
Sbjct: 107 CHFENCGKAFKKHN---QLKVHQF-SH-----------TQQLPYECPHEGCDKRFSLPSR 151

Query: 560 LDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVH 596
           L  H  +H+     +   C       +    H    H
Sbjct: 152 LKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 18/155 (11%)

Query: 386 YKCNICDC--FFKTHSILEDHMKALHS----FPCD--KCDYVGGNLSMLTSHQNSHNSQT 437
           + C    C   F +   L  H    H+    F CD   CD      + +  H N  ++  
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK 101

Query: 438 EVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSC--YLCEEKFENSESLRTH 495
                        E C + F++ + ++ H    HT   PY C    C+++F     L+ H
Sbjct: 102 ICV-----YVCHFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRH 155

Query: 496 MNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQ 530
              +HA       + C      +T   +H    HQ
Sbjct: 156 E-KVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.4 bits (101), Expect = 3e-05
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 20/84 (23%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC---FRRNSKYTHLSRHKLL 527
               K + C  C   F  S +L  H    H    PY+C+IC   FRR     HL  H+  
Sbjct: 12  SKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQD---HLRDHR-Y 66

Query: 528 VHQKQIDGVGSVEIGEK-YSCTQC 550
           +H             EK + C +C
Sbjct: 67  IH-----------SKEKPFKCQEC 79

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.3 bits (98), Expect = 4e-05
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC---FRRNSKYTHLSRHK 525
              DKPY C  C+  F    +L +H  ++H    PY CNIC   F R +   +L  H 
Sbjct: 12  THSDKPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPA---NLKTHT 65

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 470 KHTGDKPYSCYL--CEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHK 525
                +PY+C +  C+ +F  S+ L  H+   H    P+ C IC R  S+  HL+ H 
Sbjct: 13  VVPKMRPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 451 EYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHM 496
           E C + F R+  + +HI   HTG KP+ C +C   F  S+ L TH+
Sbjct: 25  ESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 542 GEK-YSCT--QCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRR 594
             + Y+C    C  +      L  H+ +H+  +  QC +C+R FSR     TH R 
Sbjct: 16  KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 22/87 (25%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNS---LHALLFPYSCNIC---FRRNSKYTHLSRH 524
           HTG+KPY+C  C++ F   + L  H       + +   + C+ C   F R +    ++RH
Sbjct: 10  HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN---TMARH 66

Query: 525 KLLVHQKQIDGVGSVEIGEK-YSCTQC 550
                            G         
Sbjct: 67  A-DNCA-----------GPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.9 bits (89), Expect = 9e-04
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 674 LKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH---NQKEQTFMCTQCDFTSSSKDT 730
                R H     + C  C+  + +K   + H   +   N     F+C++C  T + ++T
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 731 LNTHAMVHADELKFSCQNC 749
           +  HA   A       +N 
Sbjct: 63  MARHADNCAGPDGVEGENS 81

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 7e-05
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 33 KFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM 81
          K++C  C       + +K HI THT  +PY+C++C F   +   L  HM
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 12/54 (22%), Positives = 20/54 (37%)

Query: 544 KYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHG 597
           KY C +C  +      L  H+  H+  R + C  C   F  + +   H +    
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.0 bits (97), Expect = 8e-05
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 12/90 (13%)

Query: 409 HSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQC--EYCSQLFRRASAVEKH 466
           H+     C       S L +H  +H    E P         C  + C   F R+  + +H
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRTHTG--EKP-------YHCDWDGCGWKFARSDELTRH 56

Query: 467 IALKHTGDKPYSCYLCEEKFENSESLRTHM 496
              KHTG +P+ C  C+  F  S+ L  HM
Sbjct: 57  YR-KHTGHRPFQCQKCDRAFSRSDHLALHM 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 25/127 (19%), Positives = 37/127 (29%), Gaps = 42/127 (33%)

Query: 470 KHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI--CFRRNSKYTHLSRHKLL 527
           K T         C + +  S  L+ H+ + H    PY C+   C  + ++   L+RH   
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRH--- 56

Query: 528 VHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSD 587
                                                  H+  R  QC  C R FSR   
Sbjct: 57  ------------------------------------YRKHTGHRPFQCQKCDRAFSRSDH 80

Query: 588 NNTHQRR 594
              H +R
Sbjct: 81  LALHMKR 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.7 bits (99), Expect = 8e-05
 Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 21/126 (16%)

Query: 475 KPYSCYL--CEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQ 532
           +  +C    C + F ++ ++R H+++ H     + C  C +   + + L RH+L VH   
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHT-HGPR-VHVCAECGKAFVESSKLKRHQL-VHT-- 58

Query: 533 IDGVGSVEIGEK-YSCT--QCSYQTYHKHALDNHMPLHSLDRKHQCPV--CLRRFSRQSD 587
                    GEK + CT   C  +      L  H+ +H+ DR + CP   C ++F++ ++
Sbjct: 59  ---------GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN 109

Query: 588 NNTHQR 593
             +H  
Sbjct: 110 LKSHIL 115

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 450 CEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKF 486
           C+ C + F R   +  HI   HT ++P+ C +     
Sbjct: 15  CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC 511
            +  KPY C  C + F   + L  H+  +H    P+ C + 
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 5e-04
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 13/97 (13%)

Query: 404 HMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTEVPPILSKNKRQCEYCSQLFRRASAV 463
            ++    + C  C+    +L    SH+              +N   C YCS  F      
Sbjct: 10  PVENKEVYQCRLCNAKLSSLLEQGSHERLC-----------RNAAVCPYCSLRFFSPELK 58

Query: 464 EKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLH 500
           ++H +      K  +C  C   F++S S+  H   +H
Sbjct: 59  QEHES--KCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 7/80 (8%)

Query: 450 CEYCSQLFRRASAVEKHIALKHTGDKPYSC--YLCEEKFENSESLRTHMNSLH---ALLF 504
            E C + F++ + ++ H    HT   PY C    C+++F     L+ H    H       
Sbjct: 6   FENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAGYPCKK 63

Query: 505 PYSCNICFRRNSKYTHLSRH 524
             SC+   +  + Y      
Sbjct: 64  DDSCSFVGKTWTLYLKHVAE 83

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 37.8 bits (89), Expect = 7e-04
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC---FRRNSKYTHLSRHK 525
           H+G+KPY C  C + F  S  L  H   +H    PY C  C   F +NS    L  H+
Sbjct: 9   HSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNS---GLINHQ 62

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.8 bits (89), Expect = 8e-04
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNIC---FRRNSKYTHLSRHK 525
               + Y C  C + F +S  L  H    H    PY C+ C   F + S   HL  H 
Sbjct: 13  QRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRS---HLIGHH 66

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	771
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.66
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.66
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.66
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.64
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.58
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.57
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.56
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.55
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.55
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.53
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.52
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.52
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.48
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.48
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.46
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.43
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.42
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.4
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.39
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.39
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.38
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.38
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.37
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.37
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.37
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.36
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.35
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.34
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.33
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.31
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.3
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.28
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.28
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.25
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.25
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.25
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.24
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.23
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.23
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.21
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.21
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.19
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.19
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.18
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.1
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.07
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.06
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.06
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.03
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.99
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.97
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.96
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.95
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.95
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.93
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.9
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.9
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.87
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.84
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.83
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.79
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.73
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.69
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.67
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.65
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.64
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.61
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.54
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.54
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.54
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.53
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.48
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.35
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.33
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.29
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.29
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.27
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.27
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.26
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.25
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.2
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.19
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.19
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.15
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.15
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.44
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.14
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.43
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.13
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.12
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.12
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.11
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.09
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.06
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.05
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.03
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.26
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.0
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.99
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.23
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.16
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.9
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.9
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.11
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.69
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.61
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.39
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.95
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.87
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.21
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.13
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.13
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.38
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.4
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.14
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.69
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.73
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.81

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.4e-36  Score=288.64  Aligned_cols=135  Identities=24%  Similarity=0.528  Sum_probs=70.9

Q ss_pred             ccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHh
Q psy13090        630 QLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH  709 (771)
Q Consensus       630 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H  709 (771)
                      +|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|
T Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  128 (190)
T 2i13_A           49 PYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH  128 (190)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHh
Confidence            45555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             cCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHH
Q psy13090        710 NQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQ  765 (771)
Q Consensus       710 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~  765 (771)
                      + +++||.|++|++.|.+...|..|+++|++++||.|++||+.|..++.|+.|++.
T Consensus       129 ~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  183 (190)
T 2i13_A          129 T-GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT  183 (190)
T ss_dssp             H-CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTT
T ss_pred             C-CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHh
Confidence            4 345555555555555555555555555555555555555555555555555443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=8.2e-36  Score=285.98  Aligned_cols=170  Identities=27%  Similarity=0.595  Sum_probs=145.4

Q ss_pred             ceecCCCCcccCChHHHHccccccCCCCCCCCcccccccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCcc
Q psy13090        544 KYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAF  623 (771)
Q Consensus       544 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~  623 (771)
                      +|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.+++                          
T Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------------------------   74 (190)
T 2i13_A           21 PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG--------------------------   74 (190)
T ss_dssp             ----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHC--------------------------
T ss_pred             CCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC--------------------------
Confidence            488999999999999999999999999999999999999999999999998553                          


Q ss_pred             ccCCCCccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHH
Q psy13090        624 EMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFE  703 (771)
Q Consensus       624 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~  703 (771)
                          +++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.++..|.
T Consensus        75 ----~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  150 (190)
T 2i13_A           75 ----EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLH  150 (190)
T ss_dssp             ----CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             ----CCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHH
Confidence                4679999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcc
Q psy13090        704 YHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       704 ~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      .|+++|+ +++||.|++|++.|.++..|..|+++|+|++||
T Consensus       151 ~H~~~H~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          151 THQRTHT-GEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHH-CCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHhcC-CCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            9999999 689999999999999999999999999999987

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=2.6e-30  Score=247.56  Aligned_cols=165  Identities=21%  Similarity=0.530  Sum_probs=105.4

Q ss_pred             CCCCCCC--cccccccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCccccCCCCcccc--ccchhhccChH
Q psy13090        569 LDRKHQC--PVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTC--DICDRVFQTDK  644 (771)
Q Consensus       569 ~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~  644 (771)
                      +.++|.|  +.|++.|.+...|..|++.+++                              +++|.|  ++|++.|.+..
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~------------------------------~~~~~C~~~~C~~~f~~~~   58 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTG------------------------------EKPFPCKEEGCEKGFTSLH   58 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHC------------------------------CCSSCCSSTTCCCCCSSHH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCC------------------------------CCCccCCCCCCChhhCCHH
Confidence            3455666  4566666666666666655322                              345666  56666666666


Q ss_pred             HHHHHHhhccCCCccccc--cccccccChhHHHHHH-HHh-cCCCCccC--CcCCccCCCchhHHHHHHHhcCCCCeeec
Q psy13090        645 QWKLHMGFHNTKRRLPCK--LCGFRLKNHKQLKLHQ-RYH-LSSNLFRC--EKCNLGYSRKDSFEYHMTSHNQKEQTFMC  718 (771)
Q Consensus       645 ~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~-~~H-~~~~~~~C--~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  718 (771)
                      .|..|+++|.++++|.|+  .|++.|.+...|..|+ +.| .++++|.|  ++|++.|.+...|..|+++|+ +++||.|
T Consensus        59 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-~~~~~~C  137 (190)
T 1tf6_A           59 HLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT-QQLPYEC  137 (190)
T ss_dssp             HHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS-SSCSSBC
T ss_pred             HHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC-CCCCccC
Confidence            666666666666666666  6666666666666666 445 34566666  666666666666666666666 4666666


Q ss_pred             cc--CCcccCChhHHHHHHhhccCCCccccCC---CCCccchhhhhhhHHHHHh
Q psy13090        719 TQ--CDFTSSSKDTLNTHAMVHADELKFSCQN---CDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       719 ~~--C~~~f~~~~~L~~H~~~H~~e~~~~C~~---C~~~f~~~~~l~~H~~~~H  767 (771)
                      ++  |+++|.+...|..|+++|++   |.|.+   |++.|.+++.|..|++.+|
T Consensus       138 ~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          138 PHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             CSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            55  66666666666666666666   66666   6666666666666665544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=4.1e-30  Score=246.22  Aligned_cols=166  Identities=26%  Similarity=0.505  Sum_probs=152.3

Q ss_pred             CCceec--CCCCcccCChHHHHccccccCCCCCCCC--cccccccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhh
Q psy13090        542 GEKYSC--TQCSYQTYHKHALDNHMPLHSLDRKHQC--PVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALR  617 (771)
Q Consensus       542 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~  617 (771)
                      ..+|.|  +.|++.|.+...|..|+++|.++++|.|  +.|++.|.+...|..|++.+++                    
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------   69 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG--------------------   69 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT--------------------
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC--------------------
Confidence            345999  7899999999999999999999999999  8899999999999999987432                    


Q ss_pred             cCCCccccCCCCccccc--cchhhccChHHHHHHH-hhc-cCCCcccc--ccccccccChhHHHHHHHHhcCCCCccCCc
Q psy13090        618 MKPSAFEMQSESQLTCD--ICDRVFQTDKQWKLHM-GFH-NTKRRLPC--KLCGFRLKNHKQLKLHQRYHLSSNLFRCEK  691 (771)
Q Consensus       618 ~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~-~~H-~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  691 (771)
                                +++|.|+  +|++.|.+...|..|+ +.| .++++|.|  ++|++.|.+...|..|+++|++++||.|++
T Consensus        70 ----------~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  139 (190)
T 1tf6_A           70 ----------EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH  139 (190)
T ss_dssp             ----------CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCS
T ss_pred             ----------CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCC
Confidence                      4679999  8999999999999999 667 47889999  999999999999999999999999999988


Q ss_pred             --CCccCCCchhHHHHHHHhcCCCCeeeccc---CCcccCChhHHHHHHhhccCC
Q psy13090        692 --CNLGYSRKDSFEYHMTSHNQKEQTFMCTQ---CDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       692 --C~~~F~~~~~L~~H~~~H~~~~~~~~C~~---C~~~f~~~~~L~~H~~~H~~e  741 (771)
                        |+++|.+.+.|..|+++|++    |.|++   |++.|.+...|..|+++|++|
T Consensus       140 ~~C~k~F~~~~~L~~H~~~H~~----~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          140 EGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             SSCCCBCSSHHHHHHHHTSSCS----CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CCCCchhcCHHHHHHHHHHhCC----CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence              99999999999999999984    99999   999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2.2e-27  Score=219.15  Aligned_cols=139  Identities=24%  Similarity=0.499  Sum_probs=131.3

Q ss_pred             CCccccccchhhccChHHHHHHHh---hccCCCccccccc-----cccccChhHHHHHHHHhcCCCCccCCc--CCccCC
Q psy13090        628 ESQLTCDICDRVFQTDKQWKLHMG---FHNTKRRLPCKLC-----GFRLKNHKQLKLHQRYHLSSNLFRCEK--CNLGYS  697 (771)
Q Consensus       628 ~~~~~C~~C~~~f~~~~~L~~H~~---~H~~~~~~~C~~C-----~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~  697 (771)
                      |.+|.|++|++.|.+...|..|++   +|.++++|.|++|     ++.|.+...|..|+++|++++||.|++  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            357999999999999999999998   6889999998753     499999999999999999999999985  999999


Q ss_pred             CchhHHHHHHHhcCCCCeeeccc--CCcccCChhHHHHHH-hhccCCCccccCC--CCCccchhhhhhhHHHHHh
Q psy13090        698 RKDSFEYHMTSHNQKEQTFMCTQ--CDFTSSSKDTLNTHA-MVHADELKFSCQN--CDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       698 ~~~~L~~H~~~H~~~~~~~~C~~--C~~~f~~~~~L~~H~-~~H~~e~~~~C~~--C~~~f~~~~~l~~H~~~~H  767 (771)
                      +...|..|+++|+ ++++|.|++  |++.|.+...|..|+ ++|++++||.|++  ||+.|.+++.|+.|++.+|
T Consensus        81 ~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           81 RLENLKTHLRSHT-GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             SHHHHHHHHHHTT-TCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHcC-CCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            9999999999998 689999999  999999999999999 8999999999999  9999999999999999876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=6e-26  Score=209.54  Aligned_cols=146  Identities=21%  Similarity=0.374  Sum_probs=123.0

Q ss_pred             CCCCCCcccccccCCchhHHHHHHHh--cCCCCCCchhhhhhhhhhHHhhcCCCccccCCCCccccccchhhccChHHHH
Q psy13090        570 DRKHQCPVCLRRFSRQSDNNTHQRRV--HGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWK  647 (771)
Q Consensus       570 ~~~~~C~~C~~~f~~~~~L~~H~~~~--H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~  647 (771)
                      |.+|.|+.|++.|.+...|..|++..  |.+.+++.|..                        -.|+.|++.|.+...|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~------------------------c~C~~c~~~f~~~~~l~   56 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHW------------------------GGCSRELRPFKAQYMLV   56 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCB------------------------TTCTTTTCCCSSHHHHH
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCC------------------------CCccchhhhhhhHHHHH
Confidence            34677888888888888888887753  33222222211                        02455669999999999


Q ss_pred             HHHhhccCCCcccccc--ccccccChhHHHHHHHHhcCCCCccCCc--CCccCCCchhHHHHH-HHhcCCCCeeeccc--
Q psy13090        648 LHMGFHNTKRRLPCKL--CGFRLKNHKQLKLHQRYHLSSNLFRCEK--CNLGYSRKDSFEYHM-TSHNQKEQTFMCTQ--  720 (771)
Q Consensus       648 ~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~-~~H~~~~~~~~C~~--  720 (771)
                      .|+++|.++++|.|++  |++.|.+...|..|+++|++++||.|++  |+++|.+...|..|+ ++|+ +++||.|++  
T Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-~~~~~~C~~~~  135 (155)
T 2gli_A           57 VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS-NEKPYVCKLPG  135 (155)
T ss_dssp             HHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTC-SCCCEECCSTT
T ss_pred             HHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC-CCCCeeCCCCC
Confidence            9999999999999985  9999999999999999999999999998  999999999999999 7887 689999998  


Q ss_pred             CCcccCChhHHHHHHhhccC
Q psy13090        721 CDFTSSSKDTLNTHAMVHAD  740 (771)
Q Consensus       721 C~~~f~~~~~L~~H~~~H~~  740 (771)
                      |++.|.++..|..|+++|+|
T Consensus       136 C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          136 CTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TCCEESSHHHHHHHHHHSCC
T ss_pred             CccccCCHHHHHHHHHhhcC
Confidence            99999999999999999876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=2.7e-24  Score=190.19  Aligned_cols=113  Identities=25%  Similarity=0.510  Sum_probs=65.9

Q ss_pred             CCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHh--cCCCCeeecccCCcccCChhHHH
Q psy13090        655 TKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH--NQKEQTFMCTQCDFTSSSKDTLN  732 (771)
Q Consensus       655 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H--~~~~~~~~C~~C~~~f~~~~~L~  732 (771)
                      ++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++.|  +.++++|.|++|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            4455555555555555555555555555555555555555555555555555542  12355566666666666666666


Q ss_pred             HHHhhccCCCccccCCCCCccchhhhhhhHHHHHh
Q psy13090        733 THAMVHADELKFSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       733 ~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      .|+++|++++||.|++|++.|.+++.|+.|++.+|
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            66666666666666666666666666666665554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=4.1e-25  Score=195.27  Aligned_cols=108  Identities=13%  Similarity=0.199  Sum_probs=90.0

Q ss_pred             HHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCC
Q psy13090        648 LHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSS  727 (771)
Q Consensus       648 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~  727 (771)
                      .|..+|.|+++|.|++||+.|.+...|..|+++|++++||.|++|+++|.+++.|..|+++|+ +++||.|++||++|.+
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHT-GERRYQCLACGKSFIN   90 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHH-TCCCEEESSSCCEESS
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccC-CCccccCCCCCCCcCC
Confidence            345667888888888888888888888888888888888888888888888888888888888 5888888888888888


Q ss_pred             hhHHHHHHhhccCCC------ccccCCCCCccchh
Q psy13090        728 KDTLNTHAMVHADEL------KFSCQNCDFKCSKL  756 (771)
Q Consensus       728 ~~~L~~H~~~H~~e~------~~~C~~C~~~f~~~  756 (771)
                      +..|..|+++|++++      +|+|.+|++.|...
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            888888888887654      48888888887654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=8.6e-24  Score=185.34  Aligned_cols=111  Identities=28%  Similarity=0.561  Sum_probs=81.3

Q ss_pred             cCCCcccccc--ccccccChhHHHHHHHHhcCCCCccCC--cCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChh
Q psy13090        654 NTKRRLPCKL--CGFRLKNHKQLKLHQRYHLSSNLFRCE--KCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKD  729 (771)
Q Consensus       654 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~  729 (771)
                      +++++|.|++  |++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+++|+ ++++|.|++|++.|.+..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT-GVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH-CCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcC-CCCCccCCccCchhCCHH
Confidence            3566777775  777777777777777777777777777  57777777777777777776 467777777777777777


Q ss_pred             HHHHHHhhccCCCcccc--CCCCCccchhhhhhhHHHH
Q psy13090        730 TLNTHAMVHADELKFSC--QNCDFKCSKLSCVRNVISQ  765 (771)
Q Consensus       730 ~L~~H~~~H~~e~~~~C--~~C~~~f~~~~~l~~H~~~  765 (771)
                      .|..|+++|++++||.|  ++||+.|.+++.|..|++.
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            77777777777777777  6777777777777777653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=2.1e-23  Score=184.37  Aligned_cols=116  Identities=24%  Similarity=0.510  Sum_probs=109.5

Q ss_pred             CCCCccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHH---hcCCCCccCCcCCccCCCchhH
Q psy13090        626 QSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRY---HLSSNLFRCEKCNLGYSRKDSF  702 (771)
Q Consensus       626 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~---H~~~~~~~C~~C~~~F~~~~~L  702 (771)
                      .++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.   |.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            3578899999999999999999999999999999999999999999999999996   5789999999999999999999


Q ss_pred             HHHHHHhcCCCCeeecccCCcccCChhHHHHHHh-hccCCC
Q psy13090        703 EYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAM-VHADEL  742 (771)
Q Consensus       703 ~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~e~  742 (771)
                      ..|+++|+ +++||.|++|++.|.++..|..|++ .|.++.
T Consensus        83 ~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHT-GEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHS-SSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcC-CCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            99999999 6899999999999999999999997 677764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=2.6e-24  Score=190.08  Aligned_cols=103  Identities=15%  Similarity=0.372  Sum_probs=97.1

Q ss_pred             CCCCccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHH
Q psy13090        626 QSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYH  705 (771)
Q Consensus       626 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H  705 (771)
                      .|+++|.|++||++|.+...|..|+++|++++||.|++||+.|.+...|..|+++|++++||.|++||++|.+++.|..|
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   97 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSH   97 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCC-----CCeeecccCCcccCCh
Q psy13090        706 MTSHNQK-----EQTFMCTQCDFTSSSK  728 (771)
Q Consensus       706 ~~~H~~~-----~~~~~C~~C~~~f~~~  728 (771)
                      +++|+++     .++|+|.+|++.|...
T Consensus        98 ~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           98 IKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             hHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            9999842     3579999999998654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=8.3e-24  Score=186.89  Aligned_cols=116  Identities=22%  Similarity=0.495  Sum_probs=97.3

Q ss_pred             CCccccc--cchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCc--CCccCCCchhHH
Q psy13090        628 ESQLTCD--ICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEK--CNLGYSRKDSFE  703 (771)
Q Consensus       628 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~  703 (771)
                      +++|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|+++|+++++|.|++  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            5678998  8999999999999999988 7889999999999999999999999999999999975  999999999999


Q ss_pred             HHHHHhcCCCCeeecc--cCCcccCChhHHHHHHhhccCCCccc
Q psy13090        704 YHMTSHNQKEQTFMCT--QCDFTSSSKDTLNTHAMVHADELKFS  745 (771)
Q Consensus       704 ~H~~~H~~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~e~~~~  745 (771)
                      .|+++|+ ++++|.|+  .|++.|.+...|..|+++|+++++++
T Consensus        82 ~H~~~h~-~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVRIHT-GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHH-CCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHhC-CCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            9999998 58899995  49999999999999999999988764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=1.2e-23  Score=193.93  Aligned_cols=121  Identities=23%  Similarity=0.393  Sum_probs=114.4

Q ss_pred             CCCCccccccchhhccChHHHHHHHhh-ccCCCc--------cccccccccccChhHHHHHHHHhcCCCCccCCc--CCc
Q psy13090        626 QSESQLTCDICDRVFQTDKQWKLHMGF-HNTKRR--------LPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEK--CNL  694 (771)
Q Consensus       626 ~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~--------~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~  694 (771)
                      ..+.+|.|++|++.|.+...|..|++. |.++.+        |.|++|++.|.+...|..|+++|+++++|.|++  |++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            456789999999999999999999998 777655        899999999999999999999999999999998  999


Q ss_pred             cCCCchhHHHHHHHhcCCCCeeeccc--CCcccCChhHHHHHHhhccCCCccccC
Q psy13090        695 GYSRKDSFEYHMTSHNQKEQTFMCTQ--CDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       695 ~F~~~~~L~~H~~~H~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      .|.+...|..|+++|+ ++++|.|++  |++.|.+...|..|+++|++++||.|.
T Consensus       101 ~f~~~~~L~~H~~~h~-~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          101 IFARSENLKIHKRTHT-GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             EESCHHHHHHHHTTTC-SSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCHHHHHHHHHhhC-CCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999 689999997  999999999999999999999999996

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=2.2e-23  Score=182.79  Aligned_cols=111  Identities=27%  Similarity=0.574  Sum_probs=107.4

Q ss_pred             CCCcccccc--chhhccChHHHHHHHhhccCCCccccc--cccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhH
Q psy13090        627 SESQLTCDI--CDRVFQTDKQWKLHMGFHNTKRRLPCK--LCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSF  702 (771)
Q Consensus       627 ~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L  702 (771)
                      ++++|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            578899997  999999999999999999999999999  7999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCeeec--ccCCcccCChhHHHHHHhhc
Q psy13090        703 EYHMTSHNQKEQTFMC--TQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       703 ~~H~~~H~~~~~~~~C--~~C~~~f~~~~~L~~H~~~H  738 (771)
                      ..|+++|+ ++++|.|  ++||+.|.+...|..|+++|
T Consensus        83 ~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHT-GEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHH-TCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhc-CCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999 5899999  89999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=1.5e-22  Score=178.80  Aligned_cols=111  Identities=22%  Similarity=0.474  Sum_probs=103.7

Q ss_pred             CCCccccc--cccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeeccc--CCcccCChhH
Q psy13090        655 TKRRLPCK--LCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQ--CDFTSSSKDT  730 (771)
Q Consensus       655 ~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~--C~~~f~~~~~  730 (771)
                      ++++|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|+++|+ ++++|.|++  |++.|.+...
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT-GEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTS-CCCCEECCSTTCCCEESCHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcC-CCCCeeCCCCCCcCccCCHHH
Confidence            45789999  8999999999999999999 8999999999999999999999999998 689999986  9999999999


Q ss_pred             HHHHHhhccCCCccccC--CCCCccchhhhhhhHHHHHh
Q psy13090        731 LNTHAMVHADELKFSCQ--NCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       731 L~~H~~~H~~e~~~~C~--~C~~~f~~~~~l~~H~~~~H  767 (771)
                      |..|+++|++++||.|+  .||+.|.+++.|..|++.++
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~  118 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA  118 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHc
Confidence            99999999999999996  59999999999999998865

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=2.4e-22  Score=185.14  Aligned_cols=131  Identities=21%  Similarity=0.342  Sum_probs=116.1

Q ss_pred             cCCCCCCCCcccccccCCchhHHHHHHHhcCCCCCCchhhhhhhhhhHHhhcCCCccccCCCCccccccchhhccChHHH
Q psy13090        567 HSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQW  646 (771)
Q Consensus       567 h~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L  646 (771)
                      ..++.+|.|+.|++.|.+...|..|++.+|.+..+....                     ...+|.|++|++.|.+...|
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~---------------------~~~~~~C~~C~~~f~~~~~l   78 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH---------------------VCYWEECPREGKSFKAKYKL   78 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSC---------------------CCCBTTCTTSSCCCSSHHHH
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCc---------------------cccccCCCCcccccCCHHHH
Confidence            456788999999999999999999999877654321110                     12358999999999999999


Q ss_pred             HHHHhhccCCCcccccc--ccccccChhHHHHHHHHhcCCCCccCCc--CCccCCCchhHHHHHHHhcCCCCeeecc
Q psy13090        647 KLHMGFHNTKRRLPCKL--CGFRLKNHKQLKLHQRYHLSSNLFRCEK--CNLGYSRKDSFEYHMTSHNQKEQTFMCT  719 (771)
Q Consensus       647 ~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~C~  719 (771)
                      ..|+++|.++++|.|++  |++.|.+...|..|+++|++++||.|++  |++.|.+...|..|+++|+ +++||.|+
T Consensus        79 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-~~k~~~c~  154 (155)
T 2rpc_A           79 VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT-SDKSGPSS  154 (155)
T ss_dssp             HHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTT-SCCCSCSC
T ss_pred             HHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhc-CCCCCCCC
Confidence            99999999999999998  9999999999999999999999999997  9999999999999999999 68999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=2.3e-19  Score=153.24  Aligned_cols=89  Identities=27%  Similarity=0.581  Sum_probs=48.0

Q ss_pred             CCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHH
Q psy13090        656 KRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHA  735 (771)
Q Consensus       656 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~  735 (771)
                      +++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|..|+
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS-KEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSC-CCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhC-CCCCeECCCcCCcccCHHHHHHHH
Confidence            3445555555555555555555555555555555555555555555555555554 345555555555555555555555


Q ss_pred             hhccCCCccc
Q psy13090        736 MVHADELKFS  745 (771)
Q Consensus       736 ~~H~~e~~~~  745 (771)
                      ++|++++||.
T Consensus        94 ~~H~~~~~~~  103 (106)
T 2ee8_A           94 TLHMQTSSPT  103 (106)
T ss_dssp             HHTTSCCCCC
T ss_pred             HHhCCCCCCc
Confidence            5555555554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=3e-19  Score=149.37  Aligned_cols=91  Identities=23%  Similarity=0.542  Sum_probs=72.4

Q ss_pred             ccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHH
Q psy13090        653 HNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLN  732 (771)
Q Consensus       653 H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~  732 (771)
                      +.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS-DERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSC-CCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC-CCCCccCCCCCCccCCHHHHH
Confidence            4566778888888888888888888888888888888888888888888888888877 577888888888888888888


Q ss_pred             HHHhhccCCCcc
Q psy13090        733 THAMVHADELKF  744 (771)
Q Consensus       733 ~H~~~H~~e~~~  744 (771)
                      .|+++|+++++.
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            888888877654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=2.7e-19  Score=147.66  Aligned_cols=87  Identities=26%  Similarity=0.548  Sum_probs=67.7

Q ss_pred             CCCccccc--cccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHH
Q psy13090        655 TKRRLPCK--LCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLN  732 (771)
Q Consensus       655 ~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~  732 (771)
                      |++||.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT-GEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH-CCCCEECTTTCCEESSHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcC-CCCCccCCCCCchhCCHHHHH
Confidence            35778887  588888888888888888888888888888888888888888888887 577888888888888888888


Q ss_pred             HHHhhccCCC
Q psy13090        733 THAMVHADEL  742 (771)
Q Consensus       733 ~H~~~H~~e~  742 (771)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            8888888775

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.8e-19  Score=154.00  Aligned_cols=95  Identities=20%  Similarity=0.310  Sum_probs=86.1

Q ss_pred             HHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCCh
Q psy13090        649 HMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSK  728 (771)
Q Consensus       649 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~  728 (771)
                      +++.|.++++|.|++|++.|.+...|..|+++|  +++|.|++|++.|.+...|..|++ |+ +++||+|++|++.|.+.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~-~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KC-EYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HC-STGGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cC-CCCCccCccccchhCCH
Confidence            456788999999999999999999999999998  478999999999999999999996 87 68999999999999999


Q ss_pred             hHHHHHHh-hccCCCccccC
Q psy13090        729 DTLNTHAM-VHADELKFSCQ  747 (771)
Q Consensus       729 ~~L~~H~~-~H~~e~~~~C~  747 (771)
                      ..|..|++ +|++++||.|.
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            99999997 99999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=3.9e-20  Score=160.64  Aligned_cols=103  Identities=17%  Similarity=0.230  Sum_probs=67.7

Q ss_pred             hHHHHHHHhhccCCCccccccccccccChhHHHHHHHH--hcCCCCcc-CCcCCccC--CCchhHHHHHHHhcCCCCeee
Q psy13090        643 DKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRY--HLSSNLFR-CEKCNLGY--SRKDSFEYHMTSHNQKEQTFM  717 (771)
Q Consensus       643 ~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~--H~~~~~~~-C~~C~~~F--~~~~~L~~H~~~H~~~~~~~~  717 (771)
                      ...|..|+++|++++||.|++|++.|.+...|..|+++  |.+++++. |++|++.|  .+...|..|+++|+ +++||.
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~-~~~~~~   82 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED-AQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC-CCSSCB
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC-CCcceE
Confidence            34556666677777777777777777777777777776  55555543 67777666  66666667766666 466677


Q ss_pred             cccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        718 CTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       718 C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      |++|++.|.+...|..|+++|+.......
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            77777777777777777666665554444

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=1.1e-18  Score=149.05  Aligned_cols=93  Identities=20%  Similarity=0.533  Sum_probs=88.4

Q ss_pred             cCCCCccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHH
Q psy13090        625 MQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEY  704 (771)
Q Consensus       625 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~  704 (771)
                      ...+++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCeeec
Q psy13090        705 HMTSHNQKEQTFMC  718 (771)
Q Consensus       705 H~~~H~~~~~~~~C  718 (771)
                      |+++|+ +++||.+
T Consensus        92 H~~~H~-~~~~~~~  104 (106)
T 2ee8_A           92 HKTLHM-QTSSPTA  104 (106)
T ss_dssp             HHHHTT-SCCCCCC
T ss_pred             HHHHhC-CCCCCcC
Confidence            999999 5888864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=3.7e-20  Score=160.80  Aligned_cols=99  Identities=15%  Similarity=0.210  Sum_probs=90.8

Q ss_pred             ChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHH--hcCCCCe-eecccCCccc--CChhHHHHHHhhccCCCcc
Q psy13090        670 NHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTS--HNQKEQT-FMCTQCDFTS--SSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       670 ~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~--H~~~~~~-~~C~~C~~~f--~~~~~L~~H~~~H~~e~~~  744 (771)
                      +...|..|+++|++++||.|++|++.|.+...|..|+++  |.+ +++ +.|++|++.|  .+...|..|+++|++++||
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~-~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR-DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCB-CSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccc-cCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            456788999999999999999999999999999999999  764 555 4599999999  9999999999999999999


Q ss_pred             ccCCCCCccchhhhhhhHHHHHhhh
Q psy13090        745 SCQNCDFKCSKLSCVRNVISQVAQK  769 (771)
Q Consensus       745 ~C~~C~~~f~~~~~l~~H~~~~H~~  769 (771)
                      .|++||+.|..++.|+.|++.+|..
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCc
Confidence            9999999999999999999988753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=7.6e-19  Score=142.11  Aligned_cols=82  Identities=26%  Similarity=0.515  Sum_probs=46.5

Q ss_pred             ccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhh
Q psy13090        658 RLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMV  737 (771)
Q Consensus       658 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~  737 (771)
                      ||.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT-GEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHH-TCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhc-CCCCCcCCCcchhhCChHHHHHHHHh
Confidence            35555555555555555555555555555555555555555555555555555 35555555555555555555555555


Q ss_pred             ccC
Q psy13090        738 HAD  740 (771)
Q Consensus       738 H~~  740 (771)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.2e-18  Score=143.82  Aligned_cols=88  Identities=28%  Similarity=0.628  Sum_probs=56.7

Q ss_pred             cCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCC-CCeeecccCCcccCChhHHH
Q psy13090        654 NTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQK-EQTFMCTQCDFTSSSKDTLN  732 (771)
Q Consensus       654 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~-~~~~~C~~C~~~f~~~~~L~  732 (771)
                      .++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++. +++|.|++|++.|.++..|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            35566666666666666666666666666666666666666666666666666666632 25666666666666666666


Q ss_pred             HHHh-hccCC
Q psy13090        733 THAM-VHADE  741 (771)
Q Consensus       733 ~H~~-~H~~e  741 (771)
                      .|++ +|+++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            6664 56554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.8e-18  Score=144.58  Aligned_cols=88  Identities=24%  Similarity=0.570  Sum_probs=84.2

Q ss_pred             CCCCccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHH
Q psy13090        626 QSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYH  705 (771)
Q Consensus       626 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H  705 (771)
                      .++++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            35788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCC
Q psy13090        706 MTSHNQKEQ  714 (771)
Q Consensus       706 ~~~H~~~~~  714 (771)
                      +++|++ ++
T Consensus        84 ~~~h~~-~~   91 (96)
T 2dmd_A           84 LRSHTG-DS   91 (96)
T ss_dssp             HTTCCS-CC
T ss_pred             HHHhcC-CC
Confidence            999995 44

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=2.7e-19  Score=132.20  Aligned_cols=59  Identities=19%  Similarity=0.360  Sum_probs=56.2

Q ss_pred             CCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHHHH
Q psy13090         30 HKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQY   88 (771)
Q Consensus        30 ~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   88 (771)
                      .||||.|++||++|...+.|..|+++|+|++||+|++|+++|.++++|+.|+++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            38999999999999999999999999999999999999999999999999999998753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=1.7e-18  Score=140.07  Aligned_cols=82  Identities=24%  Similarity=0.617  Sum_probs=79.6

Q ss_pred             ccccccchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHh
Q psy13090        630 QLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH  709 (771)
Q Consensus       630 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H  709 (771)
                      ||.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q psy13090        710 NQ  711 (771)
Q Consensus       710 ~~  711 (771)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            73

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.8e-18  Score=147.46  Aligned_cols=85  Identities=21%  Similarity=0.445  Sum_probs=42.5

Q ss_pred             ccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHH
Q psy13090        653 HNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLN  732 (771)
Q Consensus       653 H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~  732 (771)
                      |+++++|.| .|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|.
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT-GIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTC-CCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcC-CCCCeeCCCCcchhcCHHHHH
Confidence            444455555 455555555555555555555555555555555555555555555444 344455555555555555555


Q ss_pred             HHHhhcc
Q psy13090        733 THAMVHA  739 (771)
Q Consensus       733 ~H~~~H~  739 (771)
                      .|+++|+
T Consensus        83 ~H~~~~~   89 (110)
T 2csh_A           83 RHVTSCT   89 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHcc
Confidence            5544443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.7e-18  Score=142.38  Aligned_cols=84  Identities=25%  Similarity=0.443  Sum_probs=50.8

Q ss_pred             CCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCC--CccccCCCCCccchhhhhh
Q psy13090        683 SSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADE--LKFSCQNCDFKCSKLSCVR  760 (771)
Q Consensus       683 ~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e--~~~~C~~C~~~f~~~~~l~  760 (771)
                      ++++|.|++|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|..|+++|+++  +||.|++|++.|..++.|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHS-GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSC-SSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcC-CCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            4555666666666666666666666655 355666666666666666666666666554  5666666666666666666


Q ss_pred             hHHHHHh
Q psy13090        761 NVISQVA  767 (771)
Q Consensus       761 ~H~~~~H  767 (771)
                      .|++.+|
T Consensus        83 ~H~~~~H   89 (95)
T 2yt9_A           83 GHIKQVH   89 (95)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHhc
Confidence            6665544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=2.2e-18  Score=142.13  Aligned_cols=86  Identities=24%  Similarity=0.562  Sum_probs=80.9

Q ss_pred             CCccccc--cchhhccChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHH
Q psy13090        628 ESQLTCD--ICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYH  705 (771)
Q Consensus       628 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H  705 (771)
                      +++|.|+  .|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5789998  59999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCC
Q psy13090        706 MTSHNQKEQ  714 (771)
Q Consensus       706 ~~~H~~~~~  714 (771)
                      +++|++ ++
T Consensus        82 ~~~H~~-~k   89 (90)
T 1a1h_A           82 TKIHLR-QK   89 (90)
T ss_dssp             HGGGGC---
T ss_pred             HHHhcc-cC
Confidence            999984 54

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=7.5e-18  Score=144.79  Aligned_cols=87  Identities=17%  Similarity=0.376  Sum_probs=70.1

Q ss_pred             HhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhh
Q psy13090        680 YHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCV  759 (771)
Q Consensus       680 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l  759 (771)
                      .|+++++|.| .|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|..|+++|++++||.|++|++.|..++.|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHL-GLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHS-CCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcC-CCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            4677788888 78888888888888888887 477888888888888888888888888888888888888888888888


Q ss_pred             hhHHHHHhh
Q psy13090        760 RNVISQVAQ  768 (771)
Q Consensus       760 ~~H~~~~H~  768 (771)
                      ..|++.+|.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            888877764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=3.1e-18  Score=146.25  Aligned_cols=88  Identities=15%  Similarity=0.222  Sum_probs=82.8

Q ss_pred             HHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchh
Q psy13090        677 HQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKL  756 (771)
Q Consensus       677 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~  756 (771)
                      ++++|+++++|.|++|++.|.+...|..|+++|.   ++|.|++|++.|.+...|..|++ |++++||.|++|++.|..+
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH---HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC---CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            4567899999999999999999999999999984   68999999999999999999996 9999999999999999999


Q ss_pred             hhhhhHHHHHhh
Q psy13090        757 SCVRNVISQVAQ  768 (771)
Q Consensus       757 ~~l~~H~~~~H~  768 (771)
                      +.|+.|++.+|.
T Consensus        83 ~~L~~H~~~~H~   94 (107)
T 1wjp_A           83 FSIWRHQVEVHN   94 (107)
T ss_dssp             HHHHHHHHHTSC
T ss_pred             HHHHHHHHHHcC
Confidence            999999987764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=1e-17  Score=123.73  Aligned_cols=58  Identities=21%  Similarity=0.398  Sum_probs=41.5

Q ss_pred             CCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCC
Q psy13090        684 SNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       684 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      |+||+|++||++|.+.+.|..|+++|+ +++||+|++||++|.+.+.|..|+++|+||+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht-~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL-GYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH-TCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC-CCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            667777777777777777777777776 4677777777777777777777777777663

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=3.6e-18  Score=139.97  Aligned_cols=84  Identities=21%  Similarity=0.373  Sum_probs=59.7

Q ss_pred             CCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHH
Q psy13090        684 SNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVI  763 (771)
Q Consensus       684 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~  763 (771)
                      ++||.|++|++.|.+...|..|+++|+ +++||.|++|++.|.+...|..|+++|++ .+|.|+.|++.|...+.|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT-GEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH-CCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC-CCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            456777777777777777777777776 46677777777777777777777776664 6677777777777777777777


Q ss_pred             HHHhhh
Q psy13090        764 SQVAQK  769 (771)
Q Consensus       764 ~~~H~~  769 (771)
                      +.+|.-
T Consensus        79 ~~~h~~   84 (88)
T 1llm_C           79 ARLKKL   84 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.66  E-value=7.3e-17  Score=132.63  Aligned_cols=81  Identities=28%  Similarity=0.608  Sum_probs=41.7

Q ss_pred             Ccccccc--ccccccChhHHHHHHHHhcCCCCccCC--cCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHH
Q psy13090        657 RRLPCKL--CGFRLKNHKQLKLHQRYHLSSNLFRCE--KCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLN  732 (771)
Q Consensus       657 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~  732 (771)
                      ++|.|++  |++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT-GHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH-CCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC-CCCCccCCCCCcccCCHHHHH
Confidence            3455555  555555555555555555555555554  35555555555555555554 344555555555555555555


Q ss_pred             HHHhhc
Q psy13090        733 THAMVH  738 (771)
Q Consensus       733 ~H~~~H  738 (771)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            555544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.66  E-value=1.2e-16  Score=134.72  Aligned_cols=83  Identities=29%  Similarity=0.644  Sum_probs=45.6

Q ss_pred             CCcccccc--chhhccChHHHHHHHhhccCCCccccc--cccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHH
Q psy13090        628 ESQLTCDI--CDRVFQTDKQWKLHMGFHNTKRRLPCK--LCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFE  703 (771)
Q Consensus       628 ~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~  703 (771)
                      +++|.|++  |++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            44555554  555555555555555555555555553  35555555555555555555555555555555555555555


Q ss_pred             HHHHHhc
Q psy13090        704 YHMTSHN  710 (771)
Q Consensus       704 ~H~~~H~  710 (771)
                      .|+++|+
T Consensus        93 ~H~~~H~   99 (100)
T 2ebt_A           93 LHMKRHQ   99 (100)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            5555553

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.66  E-value=1.7e-16  Score=133.62  Aligned_cols=85  Identities=26%  Similarity=0.541  Sum_probs=80.8

Q ss_pred             CCCcccccc--ccccccChhHHHHHHHHhcCCCCccCC--cCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhH
Q psy13090        655 TKRRLPCKL--CGFRLKNHKQLKLHQRYHLSSNLFRCE--KCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDT  730 (771)
Q Consensus       655 ~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~  730 (771)
                      ..++|.|++  |++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+++|+ ++++|.|++|++.|.+...
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT-GAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHT-SCCSCBCSSSCCBCSSHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhC-CCCCeECCCCcCccCCHHH
Confidence            467899997  999999999999999999999999996  69999999999999999999 6899999999999999999


Q ss_pred             HHHHHhhccC
Q psy13090        731 LNTHAMVHAD  740 (771)
Q Consensus       731 L~~H~~~H~~  740 (771)
                      |..|+++|++
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=1.3e-16  Score=131.06  Aligned_cols=83  Identities=29%  Similarity=0.678  Sum_probs=79.7

Q ss_pred             CCcccccc--chhhccChHHHHHHHhhccCCCccccc--cccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHH
Q psy13090        628 ESQLTCDI--CDRVFQTDKQWKLHMGFHNTKRRLPCK--LCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFE  703 (771)
Q Consensus       628 ~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~  703 (771)
                      ..+|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  69999999999999999999999999999999999999999


Q ss_pred             HHHHHhc
Q psy13090        704 YHMTSHN  710 (771)
Q Consensus       704 ~H~~~H~  710 (771)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999883

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=8.7e-17  Score=131.19  Aligned_cols=81  Identities=19%  Similarity=0.371  Sum_probs=69.8

Q ss_pred             HHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCC---CeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        673 QLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKE---QTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       673 ~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~---~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      +|..|+++|++++||.|++|++.|.+...|..|+++|+..+   ++|.|++|++.|.+...|..|+++|++++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            35678888888889999999999999999999988877543   789999999999999999999999999999999999


Q ss_pred             CCcc
Q psy13090        750 DFKC  753 (771)
Q Consensus       750 ~~~f  753 (771)
                      +.+|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=1.9e-17  Score=135.57  Aligned_cols=82  Identities=17%  Similarity=0.331  Sum_probs=70.1

Q ss_pred             CCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHH
Q psy13090        656 KRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHA  735 (771)
Q Consensus       656 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~  735 (771)
                      ++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++  .+|.|+.|++.|.+...|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHH
Confidence            46888888888888888888888888888888888888888888888888888873  7888888888888888888888


Q ss_pred             hhcc
Q psy13090        736 MVHA  739 (771)
Q Consensus       736 ~~H~  739 (771)
                      +.++
T Consensus        79 ~~~h   82 (88)
T 1llm_C           79 ARLK   82 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.6e-16  Score=124.50  Aligned_cols=71  Identities=21%  Similarity=0.447  Sum_probs=55.9

Q ss_pred             cCCCCccCCc--CCccCCCchhHHHHHH-HhcCCCCeeeccc--CCcccCChhHHHHHHhhccCCCccccCCCCCcc
Q psy13090        682 LSSNLFRCEK--CNLGYSRKDSFEYHMT-SHNQKEQTFMCTQ--CDFTSSSKDTLNTHAMVHADELKFSCQNCDFKC  753 (771)
Q Consensus       682 ~~~~~~~C~~--C~~~F~~~~~L~~H~~-~H~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f  753 (771)
                      +++++|.|+.  |++.|.++..|..|++ .|. ++++|.|++  |++.|.++..|..|+++|++++||.|++||++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4667777776  8888888888888887 566 577888877  888888888888888888888888888888877

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=7.6e-16  Score=125.27  Aligned_cols=76  Identities=26%  Similarity=0.540  Sum_probs=38.1

Q ss_pred             ccc--ccccccccChhHHHHHHHHhcCCCCccCCc--CCccCCCchhHHHHHHHhcCCCCeeeccc---CCcccCChhHH
Q psy13090        659 LPC--KLCGFRLKNHKQLKLHQRYHLSSNLFRCEK--CNLGYSRKDSFEYHMTSHNQKEQTFMCTQ---CDFTSSSKDTL  731 (771)
Q Consensus       659 ~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~C~~---C~~~f~~~~~L  731 (771)
                      |.|  +.||+.|.+...|..|+++|++++||.|++  |+++|.+...|..|+++|++    |.|++   |++.|.+...|
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHHH
Confidence            445  445555555555555555555555555544  55555555555555555442    44554   55555555555


Q ss_pred             HHHHhhc
Q psy13090        732 NTHAMVH  738 (771)
Q Consensus       732 ~~H~~~H  738 (771)
                      ..|+++|
T Consensus        78 ~~H~~~h   84 (85)
T 2j7j_A           78 LKHVAEC   84 (85)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhc
Confidence            5554444

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=5.2e-16  Score=126.24  Aligned_cols=78  Identities=23%  Similarity=0.597  Sum_probs=74.9

Q ss_pred             CccC--CcCCccCCCchhHHHHHHHhcCCCCeeeccc--CCcccCChhHHHHHHhhccCCCccccCC---CCCccchhhh
Q psy13090        686 LFRC--EKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQ--CDFTSSSKDTLNTHAMVHADELKFSCQN---CDFKCSKLSC  758 (771)
Q Consensus       686 ~~~C--~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~e~~~~C~~---C~~~f~~~~~  758 (771)
                      ||.|  +.|++.|.+...|..|+++|+ +++||+|++  |++.|.+...|..|+++|++   |.|+.   |++.|...+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-TTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            6899  999999999999999999999 589999998  99999999999999999999   99999   9999999999


Q ss_pred             hhhHHHHHh
Q psy13090        759 VRNVISQVA  767 (771)
Q Consensus       759 l~~H~~~~H  767 (771)
                      |..|++.+|
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999998876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=5e-16  Score=121.54  Aligned_cols=65  Identities=25%  Similarity=0.414  Sum_probs=62.3

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHHH
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQ   87 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (771)
                      .+.++|++++||.|++|++.|.....|..|+++|++++||+|++|++.|..+..|+.|+++|+++
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999864

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.7e-15  Score=121.07  Aligned_cols=70  Identities=24%  Similarity=0.617  Sum_probs=43.8

Q ss_pred             CCCcccccc--ccccccChhHHHHHHH-HhcCCCCccCCc--CCccCCCchhHHHHHHHhcCCCCeeecccCCccc
Q psy13090        655 TKRRLPCKL--CGFRLKNHKQLKLHQR-YHLSSNLFRCEK--CNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTS  725 (771)
Q Consensus       655 ~~~~~~C~~--C~~~f~~~~~L~~H~~-~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f  725 (771)
                      ++++|.|..  |++.|.+...|..|++ .|+++++|.|++  |++.|.++..|..|+++|+ +++||.|++|+++|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS-DTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH-TSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC-CCCCeeCCCCCCCC
Confidence            455666654  6666666666666666 466666666666  6666666666666666666 35666666666665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=8.6e-16  Score=125.23  Aligned_cols=80  Identities=15%  Similarity=0.301  Sum_probs=74.0

Q ss_pred             HHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCC----CCccCCcCCccCCCchhHHHHHHHhcCCCCeeeccc
Q psy13090        645 QWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSS----NLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQ  720 (771)
Q Consensus       645 ~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~----~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  720 (771)
                      +|.+|+++|.+++||.|++|++.|.+...|..|+++|+++    ++|.|++|++.|.+...|..|+++|+ +++++.|+.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~~~~~   80 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA-GPDGVEGEN   80 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC-CCCSCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc-CCCCcccCC
Confidence            3567999999999999999999999999999999987765    78999999999999999999999999 589999999


Q ss_pred             CCccc
Q psy13090        721 CDFTS  725 (771)
Q Consensus       721 C~~~f  725 (771)
                      |+..|
T Consensus        81 ~~~~~   85 (86)
T 1x6h_A           81 SGPSS   85 (86)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.8e-15  Score=119.01  Aligned_cols=66  Identities=20%  Similarity=0.429  Sum_probs=52.9

Q ss_pred             HhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        680 YHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       680 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      .+.++++|.|++|++.|.+...|..|+++|+ +++||.|++|++.|.+...|..|+++|++++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHT-GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC-CSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcC-CCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3556778888888888888888888888877 47788888888888888888888888888888877

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.9e-15  Score=125.13  Aligned_cols=69  Identities=22%  Similarity=0.533  Sum_probs=54.1

Q ss_pred             cCCCCccCCcCCccCCCchhHHHHHHH-hcC--CCCeeecccCCcccCChhHHHHH-HhhccCCCccccCCCC
Q psy13090        682 LSSNLFRCEKCNLGYSRKDSFEYHMTS-HNQ--KEQTFMCTQCDFTSSSKDTLNTH-AMVHADELKFSCQNCD  750 (771)
Q Consensus       682 ~~~~~~~C~~C~~~F~~~~~L~~H~~~-H~~--~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~e~~~~C~~C~  750 (771)
                      +|++||.|++|++.|.+++.|..|+++ |++  +++||.|++||+.|.++..|..| +++|+|++||.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            577788888888888888888888874 631  47788888888888888888888 6788888888887754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=1.2e-15  Score=127.44  Aligned_cols=82  Identities=18%  Similarity=0.206  Sum_probs=64.8

Q ss_pred             cccChhHHHHHHHHhcCCCCccCCcCCccCC-CchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccc
Q psy13090        667 RLKNHKQLKLHQRYHLSSNLFRCEKCNLGYS-RKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFS  745 (771)
Q Consensus       667 ~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~-~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~  745 (771)
                      .+.....+..|+++|+++++|.|++|++.|. ++..|..|+++|++.+++|.|++|++.|.++..|..|+++|++++|+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4556667778888888888888888888888 888888888888733778888888888888888888888888888765


Q ss_pred             cCC
Q psy13090        746 CQN  748 (771)
Q Consensus       746 C~~  748 (771)
                      -..
T Consensus        85 ~~~   87 (98)
T 2gqj_A           85 AEA   87 (98)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.55  E-value=6.5e-16  Score=136.84  Aligned_cols=109  Identities=15%  Similarity=0.183  Sum_probs=63.0

Q ss_pred             CCCccccccchhhccChHHHHHHHhh---ccCCCcccccccccccc------ChhHHHHHHHHhcCCCCccCCcCCccCC
Q psy13090        627 SESQLTCDICDRVFQTDKQWKLHMGF---HNTKRRLPCKLCGFRLK------NHKQLKLHQRYHLSSNLFRCEKCNLGYS  697 (771)
Q Consensus       627 ~~~~~~C~~C~~~f~~~~~L~~H~~~---H~~~~~~~C~~C~~~f~------~~~~L~~H~~~H~~~~~~~C~~C~~~F~  697 (771)
                      +.++|.|...+....  ..+..+.+.   ...++++.|++|++.|.      ....|..|+ .|++++||.|++||+.|.
T Consensus         9 ~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~   85 (129)
T 2wbt_A            9 GSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFS   85 (129)
T ss_dssp             TCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEES
T ss_pred             cccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccC
Confidence            456676666443322  123333222   23345677777776665      344444444 466666666666666666


Q ss_pred             CchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        698 RKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       698 ~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +...|..|+++|   ++||.|++||+.|.+...|..|+++|+++
T Consensus        86 ~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           86 SSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             SHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            666666666665   45666666666666666666666666654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.9e-15  Score=119.00  Aligned_cols=65  Identities=28%  Similarity=0.493  Sum_probs=61.3

Q ss_pred             hhhcccccCCCCCcccccccccchhhhhhHHHHHH-hhcCC-CCccCCCCcccchhhHHHhhhhhHh
Q psy13090         20 ACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIM-THTGS-KPYNCSHCTFKGASSQALKYHMHVD   84 (771)
Q Consensus        20 ~~~~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~-~~~~C~~C~~~f~~~~~L~~H~~~h   84 (771)
                      +|..|+++|++++||.|++|++.|.....|..|++ .|+++ +||+|++|++.|.+++.|..|++++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   68 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ   68 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHh
Confidence            57899999999999999999999999999999997 78875 8999999999999999999999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.53  E-value=4.7e-16  Score=137.79  Aligned_cols=112  Identities=13%  Similarity=0.185  Sum_probs=91.2

Q ss_pred             hhccCCCccccccccccccChhHHHHHHHHh---cCCCCccCCcCCccCC------CchhHHHHHHHhcCCCCeeecccC
Q psy13090        651 GFHNTKRRLPCKLCGFRLKNHKQLKLHQRYH---LSSNLFRCEKCNLGYS------RKDSFEYHMTSHNQKEQTFMCTQC  721 (771)
Q Consensus       651 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H---~~~~~~~C~~C~~~F~------~~~~L~~H~~~H~~~~~~~~C~~C  721 (771)
                      .++.|.++|.|...+....  ..+..+.+.+   .+++++.|++|++.|.      ....|..|+ .|+ +++||.|++|
T Consensus         5 ~~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~-~~~~~~C~~C   80 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASK-AISQFVCPLC   80 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHH-HHCSEECTTT
T ss_pred             hhcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhC-CCCCeECCCC
Confidence            3578899999988665443  2344554433   3456788999887776      667777777 577 5899999999


Q ss_pred             CcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHHHhh
Q psy13090        722 DFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVAQ  768 (771)
Q Consensus       722 ~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H~  768 (771)
                      |+.|.+...|..|+++|  ++||.|++||+.|..++.|+.|++.+|-
T Consensus        81 ~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           81 LMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             CCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             CcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            99999999999999999  8999999999999999999999998874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=1.7e-15  Score=119.21  Aligned_cols=65  Identities=26%  Similarity=0.465  Sum_probs=61.0

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHHHHHh
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYLY   90 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   90 (771)
                      -.+++++||.|+.|++.|...+.|..|+++|++++||+|++|++.|.+++.|..|+++|++++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            47889999999999999999999999999999999999999999999999999999999877653

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1e-14  Score=120.45  Aligned_cols=71  Identities=23%  Similarity=0.359  Sum_probs=36.9

Q ss_pred             hccChHHHHHHHhhccCCCccccccccccc-cChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHH-HHHhc
Q psy13090        639 VFQTDKQWKLHMGFHNTKRRLPCKLCGFRL-KNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYH-MTSHN  710 (771)
Q Consensus       639 ~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f-~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H-~~~H~  710 (771)
                      +|.....|..|++.|.++++|.|++|++.| .+...|..|+++| +++||.|++|++.|.++..|..| +++|+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            344445555555555555555555555555 5555555555555 55555555555555555555555 44444

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.1e-14  Score=114.44  Aligned_cols=63  Identities=24%  Similarity=0.572  Sum_probs=45.3

Q ss_pred             hcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcc
Q psy13090        681 HLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       681 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      +.++++|.|++|++.|.+...|..|+++|+ ++++|+|++|++.|.+...|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHT-GEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHC-CCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcC-CCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            456667777777777777777777777776 467777777777777777777777777777765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=3.3e-15  Score=116.09  Aligned_cols=63  Identities=21%  Similarity=0.371  Sum_probs=60.5

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHHHHH
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQYL   89 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   89 (771)
                      .|++++||.|++|++.|.....|.+|+++|++++||+|++|++.|..++.|..|+++|.+++|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999999999999999999999999999987655

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=3.1e-15  Score=119.21  Aligned_cols=65  Identities=15%  Similarity=0.240  Sum_probs=60.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhh-hHhHHH
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHM-HVDMLQ   87 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~   87 (771)
                      ..+.+++++++|.|++|+++|..++.|.+|+++|++++||+|++|++.|.++++|+.|+ ++|++|
T Consensus        18 ~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           18 GVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            34678999999999999999999999999999999999999999999999999999997 567643

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.2e-14  Score=115.39  Aligned_cols=64  Identities=20%  Similarity=0.492  Sum_probs=31.8

Q ss_pred             cCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeec
Q psy13090        654 NTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMC  718 (771)
Q Consensus       654 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  718 (771)
                      .++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|+++|+ +++||+|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~-~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT-GSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSC-CCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhC-CCCCCCC
Confidence            344445555555555555555555555555555555555555555555555555554 3444444

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.1e-14  Score=120.49  Aligned_cols=68  Identities=24%  Similarity=0.482  Sum_probs=39.5

Q ss_pred             cCCCccccccccccccChhHHHHHHH-Hh---cCCCCccCCcCCccCCCchhHHHH-HHHhcCCCCeeecccCC
Q psy13090        654 NTKRRLPCKLCGFRLKNHKQLKLHQR-YH---LSSNLFRCEKCNLGYSRKDSFEYH-MTSHNQKEQTFMCTQCD  722 (771)
Q Consensus       654 ~~~~~~~C~~C~~~f~~~~~L~~H~~-~H---~~~~~~~C~~C~~~F~~~~~L~~H-~~~H~~~~~~~~C~~C~  722 (771)
                      .|++||.|++||+.|.+++.|..|++ +|   ++++||.|++||++|.+++.|..| +++|+ +++||.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht-gekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP-GEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST-TCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC-CCCCeeCCccc
Confidence            34555666666666666666666655 35   345566666666666666666666 55555 45666665533

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=4.2e-15  Score=114.07  Aligned_cols=61  Identities=18%  Similarity=0.313  Sum_probs=57.4

Q ss_pred             cccCCCCCcccccccccchhhhhhHHHHHHh-h-cCCCCccCCCCcccchhhHHHhhhhhHhH
Q psy13090         25 PRIHPHKDKFMCYACYYSTYISTNMKNHIMT-H-TGSKPYNCSHCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        25 ~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~-H-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (771)
                      +++|+|++||.|++|+++|...+.|..|+++ | ++++||+|++|++.|.++++|..|+++|.
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            5899999999999999999999999999998 7 69999999999999999999999998874

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.7e-14  Score=117.98  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=73.5

Q ss_pred             cccccChhHHHHHHHHhcCCCCccCCcCCccC-CCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHH-HhhccCCC
Q psy13090        665 GFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGY-SRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTH-AMVHADEL  742 (771)
Q Consensus       665 ~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F-~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~e~  742 (771)
                      ...|.....|..|++.|.++++|.|++|++.| .++..|..|+++|  +++||.|++|++.|.++..|..| +++|+++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC--KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH--CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH--CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            45778899999999999999999999999999 9999999999999  48999999999999999999999 88998766


Q ss_pred             cccc
Q psy13090        743 KFSC  746 (771)
Q Consensus       743 ~~~C  746 (771)
                      .|.+
T Consensus        91 ~~~~   94 (96)
T 2ctd_A           91 SGPS   94 (96)
T ss_dssp             SCSC
T ss_pred             CCCC
Confidence            5554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=6.4e-15  Score=122.90  Aligned_cols=80  Identities=13%  Similarity=0.239  Sum_probs=72.4

Q ss_pred             hccChHHHHHHHhhccCCCcccccccccccc-ChhHHHHHHHHhcC-CCCccCCcCCccCCCchhHHHHHHHhcCCCCee
Q psy13090        639 VFQTDKQWKLHMGFHNTKRRLPCKLCGFRLK-NHKQLKLHQRYHLS-SNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTF  716 (771)
Q Consensus       639 ~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~-~~~~L~~H~~~H~~-~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~  716 (771)
                      ++.....+..|+++|.++++|.|++|++.|. +...|..|+++|++ +++|.|++|++.|.++..|..|+++|+ +++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~-~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH-SAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS-CSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc-CCCCC
Confidence            3455667889999999999999999999999 99999999999999 999999999999999999999999999 57775


Q ss_pred             ecc
Q psy13090        717 MCT  719 (771)
Q Consensus       717 ~C~  719 (771)
                      .-.
T Consensus        84 ~~~   86 (98)
T 2gqj_A           84 DAE   86 (98)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.6e-14  Score=112.84  Aligned_cols=62  Identities=23%  Similarity=0.483  Sum_probs=36.9

Q ss_pred             HHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        679 RYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       679 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ++|++++||.|++|++.|.+...|..|+++|+ +++||+|++|++.|.+...|..|+++|+++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHT-GEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGG-CSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcC-CCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            34555566666666666666666666666655 355666666666666666666666666554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=1.2e-14  Score=107.79  Aligned_cols=56  Identities=29%  Similarity=0.559  Sum_probs=50.8

Q ss_pred             CCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhH
Q psy13090         30 HKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        30 ~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (771)
                      |++||.|++|+++|...+.|..|+++|++++||+|++|++.|..+++|..|+++|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            68999999999999999999999999999999999999999999999999998874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.7e-14  Score=110.14  Aligned_cols=63  Identities=21%  Similarity=0.446  Sum_probs=40.8

Q ss_pred             hcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcc
Q psy13090        681 HLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       681 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      |+++++|.|++|++.|.+...|..|+++|+ ++++|.|++|++.|.+...|..|+++|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHC-TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGC-CSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcC-CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            455666666666666666666666666665 456666666666666666666666666666553

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.4e-14  Score=114.92  Aligned_cols=63  Identities=21%  Similarity=0.487  Sum_probs=39.0

Q ss_pred             HHHHHHhcCCCCccCCcCCccCCCchhHHHHHH-HhcCCCCeeecccCCcccCChhHHHHHHhh
Q psy13090        675 KLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMT-SHNQKEQTFMCTQCDFTSSSKDTLNTHAMV  737 (771)
Q Consensus       675 ~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~  737 (771)
                      ..|+++|++++||.|++|++.|.+...|..|++ .|.+++++|+|++|++.|.+...|..|+++
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            345666666666666666666666666666665 344223566666666666666666666664

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3.7e-16  Score=122.89  Aligned_cols=71  Identities=20%  Similarity=0.344  Sum_probs=58.1

Q ss_pred             hhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        671 HKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       671 ~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      ...|..|+++|++++||.|++|++.|.+...|..        +++|.|++||+.|.+...|..|+++|++++||.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4566777888888888888888888888777765        5788888888888888888888888888888888887

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=5.9e-14  Score=111.83  Aligned_cols=61  Identities=26%  Similarity=0.413  Sum_probs=39.0

Q ss_pred             HhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHH-hhccCC
Q psy13090        680 YHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHA-MVHADE  741 (771)
Q Consensus       680 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~e  741 (771)
                      .+.+.++|.|++|++.|.++..|..|+++|+ +++||.|++|+++|.++..|.+|+ ++|++|
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLH-AAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTS-CSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhcc-CCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3445566666666666666666666666666 466666666666666666666665 356655

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.42  E-value=8.7e-14  Score=103.04  Aligned_cols=55  Identities=20%  Similarity=0.419  Sum_probs=31.8

Q ss_pred             CCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHHHHh
Q psy13090        713 EQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       713 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      ++||.|++|++.|.+...|..|+++|++++||.|++|++.|..++.|..|++.+|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4556666666666666666666666666666666666666666666666665554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2.8e-14  Score=113.52  Aligned_cols=62  Identities=11%  Similarity=0.227  Sum_probs=57.2

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHHhhcC---CCCccCCCCcccchhhHHHhhhh-hHhHHHH
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTG---SKPYNCSHCTFKGASSQALKYHM-HVDMLQY   88 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~---~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~   88 (771)
                      +|+|++||+|++|++.|...+.|..|+++|++   ++||+|++|++.|..++.|..|+ ..|.++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            58999999999999999999999999999996   89999999999999999999999 4565443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=8.3e-14  Score=109.21  Aligned_cols=61  Identities=26%  Similarity=0.498  Sum_probs=58.0

Q ss_pred             cccCCCCCccccc--ccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhH
Q psy13090         25 PRIHPHKDKFMCY--ACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        25 ~r~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (771)
                      ..+|++++||.|+  .|+++|...+.|..|+++|++++||+|++|++.|..++.|..|+++|+
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            5789999999997  599999999999999999999999999999999999999999998873

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.40  E-value=1.3e-13  Score=96.88  Aligned_cols=45  Identities=22%  Similarity=0.283  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.40  E-value=1.3e-13  Score=96.91  Aligned_cols=45  Identities=22%  Similarity=0.259  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.3e-13  Score=96.83  Aligned_cols=45  Identities=22%  Similarity=0.268  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.40  E-value=1.3e-13  Score=96.84  Aligned_cols=45  Identities=18%  Similarity=0.254  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            589999999999999999999999999999999999999999998

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.3e-13  Score=105.54  Aligned_cols=55  Identities=15%  Similarity=0.344  Sum_probs=29.3

Q ss_pred             CCeeecccCCcccCChhHHHHHHhh-c-cCCCccccCCCCCccchhhhhhhHHHHHh
Q psy13090        713 EQTFMCTQCDFTSSSKDTLNTHAMV-H-ADELKFSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       713 ~~~~~C~~C~~~f~~~~~L~~H~~~-H-~~e~~~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      ++||.|++|++.|.+...|..|+++ | ++++||.|++||+.|..++.|..|++.+|
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            4555555555555555555555554 4 34555555555555555555555555544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=97.11  Aligned_cols=45  Identities=13%  Similarity=0.126  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|+|++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            699999999999999999999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.2e-13  Score=97.10  Aligned_cols=45  Identities=22%  Similarity=0.256  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=96.77  Aligned_cols=45  Identities=18%  Similarity=0.232  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|+|++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=96.73  Aligned_cols=45  Identities=24%  Similarity=0.252  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.5e-13  Score=96.51  Aligned_cols=45  Identities=20%  Similarity=0.268  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.39  E-value=1.4e-13  Score=96.68  Aligned_cols=45  Identities=20%  Similarity=0.296  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.3e-13  Score=96.85  Aligned_cols=45  Identities=20%  Similarity=0.253  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.6e-13  Score=96.33  Aligned_cols=45  Identities=24%  Similarity=0.282  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.5e-13  Score=96.54  Aligned_cols=45  Identities=22%  Similarity=0.287  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.4e-13  Score=95.56  Aligned_cols=44  Identities=20%  Similarity=0.184  Sum_probs=43.1

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      |+++|+|++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78999999999999999999999999999999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.5e-13  Score=96.53  Aligned_cols=45  Identities=20%  Similarity=0.210  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.39  E-value=1.4e-13  Score=96.64  Aligned_cols=45  Identities=20%  Similarity=0.261  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|+|++||.|++|+++|...+.|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.8e-13  Score=96.05  Aligned_cols=45  Identities=18%  Similarity=0.174  Sum_probs=43.8

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.6e-13  Score=96.38  Aligned_cols=45  Identities=22%  Similarity=0.263  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.5e-13  Score=96.60  Aligned_cols=45  Identities=22%  Similarity=0.350  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|+|++||.|++|+++|...+.|.+|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=96.22  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.6e-13  Score=96.44  Aligned_cols=45  Identities=22%  Similarity=0.300  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|+|++||.|++|+++|...+.|.+|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=96.63  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.6e-13  Score=96.34  Aligned_cols=45  Identities=22%  Similarity=0.308  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2e-13  Score=95.91  Aligned_cols=45  Identities=18%  Similarity=0.211  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.6e-13  Score=96.42  Aligned_cols=45  Identities=22%  Similarity=0.303  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.38  E-value=4e-13  Score=99.39  Aligned_cols=56  Identities=23%  Similarity=0.593  Sum_probs=36.0

Q ss_pred             CccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCC
Q psy13090        686 LFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       686 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      ||.|++|++.|.+...|..|+++|+ +++||.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-SCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-CCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            4666666666666666666666665 4566666666666666666666666666654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.5e-13  Score=96.52  Aligned_cols=45  Identities=20%  Similarity=0.295  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-13  Score=96.15  Aligned_cols=45  Identities=20%  Similarity=0.217  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.6e-13  Score=96.37  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.9e-13  Score=96.01  Aligned_cols=45  Identities=22%  Similarity=0.294  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.9e-13  Score=95.96  Aligned_cols=45  Identities=22%  Similarity=0.256  Sum_probs=43.8

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            489999999999999999999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.9e-13  Score=95.98  Aligned_cols=45  Identities=20%  Similarity=0.251  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.4e-13  Score=96.64  Aligned_cols=45  Identities=20%  Similarity=0.273  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=2e-13  Score=95.85  Aligned_cols=45  Identities=22%  Similarity=0.338  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.9e-13  Score=96.08  Aligned_cols=45  Identities=16%  Similarity=0.140  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2e-13  Score=95.89  Aligned_cols=45  Identities=20%  Similarity=0.287  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.6e-13  Score=107.04  Aligned_cols=66  Identities=23%  Similarity=0.403  Sum_probs=45.3

Q ss_pred             hcCCCCccCCcCCccCCCchhHHHHHHHhcC--CCCeeecccCCcccCChhHHHHHH-hhccCCCcccc
Q psy13090        681 HLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQ--KEQTFMCTQCDFTSSSKDTLNTHA-MVHADELKFSC  746 (771)
Q Consensus       681 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~--~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~e~~~~C  746 (771)
                      |++++||.|++|++.|.+...|..|+++|++  ++++|.|++|++.|.+...|..|+ +.|.+++|..-
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            5667777777777777777777777777763  266777777777777777777776 45666665544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.3e-13  Score=95.60  Aligned_cols=45  Identities=16%  Similarity=0.187  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.37  E-value=2.3e-13  Score=95.62  Aligned_cols=45  Identities=20%  Similarity=0.252  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.4e-13  Score=95.45  Aligned_cols=45  Identities=18%  Similarity=0.234  Sum_probs=43.8

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.1e-13  Score=95.80  Aligned_cols=45  Identities=16%  Similarity=0.104  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.2e-13  Score=95.68  Aligned_cols=45  Identities=22%  Similarity=0.262  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.3e-13  Score=95.61  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|+|++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.37  E-value=2.8e-13  Score=95.10  Aligned_cols=45  Identities=20%  Similarity=0.152  Sum_probs=43.7

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.36  E-value=9.3e-14  Score=104.48  Aligned_cols=57  Identities=11%  Similarity=0.192  Sum_probs=53.1

Q ss_pred             hhcccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhh
Q psy13090         21 CVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYH   80 (771)
Q Consensus        21 ~~~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H   80 (771)
                      |..|+++|+|++||.|++|+++|...+.|.   ++|+|++||+|++|++.|....++..+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            678999999999999999999999999887   899999999999999999998887755

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.1e-13  Score=95.83  Aligned_cols=45  Identities=20%  Similarity=0.252  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.8e-13  Score=95.10  Aligned_cols=45  Identities=18%  Similarity=0.174  Sum_probs=43.8

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-13  Score=96.25  Aligned_cols=45  Identities=24%  Similarity=0.287  Sum_probs=44.0

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.8e-13  Score=95.17  Aligned_cols=45  Identities=22%  Similarity=0.257  Sum_probs=43.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999986

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.1e-13  Score=94.26  Aligned_cols=45  Identities=22%  Similarity=0.321  Sum_probs=43.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999986

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.1e-13  Score=94.80  Aligned_cols=45  Identities=24%  Similarity=0.294  Sum_probs=43.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHH-hhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIM-THTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~~~C~~C   67 (771)
                      .|+++|+|++||.|++|+++|...+.|..|++ +|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999 9999999999998

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.35  E-value=7.2e-13  Score=98.00  Aligned_cols=54  Identities=31%  Similarity=0.651  Sum_probs=42.7

Q ss_pred             ccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcC
Q psy13090        658 RLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQ  711 (771)
Q Consensus       658 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  711 (771)
                      ||.|++|++.|.+...|..|+++|++++||.|++|++.|.+.+.|..|+++|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            577888888888888888888888888888888888888888888888887774

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3e-15  Score=117.65  Aligned_cols=72  Identities=15%  Similarity=0.215  Sum_probs=65.9

Q ss_pred             ChHHHHHHHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccC
Q psy13090        642 TDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQC  721 (771)
Q Consensus       642 ~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  721 (771)
                      +...|..|+++|.+++||.|++||+.|.+...|..       +++|.|++|++.|.+...|..|+++|+ +++||.|++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNES-GKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCC-CCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhc-CCCCCCCCCC
Confidence            34567889999999999999999999999998887       789999999999999999999999998 6899999988

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=6.5e-13  Score=99.44  Aligned_cols=56  Identities=29%  Similarity=0.654  Sum_probs=42.7

Q ss_pred             CCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHH-hhccCC
Q psy13090        685 NLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHA-MVHADE  741 (771)
Q Consensus       685 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~e  741 (771)
                      +||.|++|++.|.+...|..|+++|+ +++||.|++|++.|.+...|..|+ ++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT-NEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT-SSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhC-CCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46778888888888888888887777 477788888888888888888886 567665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.32  E-value=7.7e-13  Score=92.82  Aligned_cols=44  Identities=30%  Similarity=0.372  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.6e-12  Score=97.22  Aligned_cols=53  Identities=26%  Similarity=0.592  Sum_probs=31.3

Q ss_pred             ccccccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHHHH-HHhc
Q psy13090        658 RLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHM-TSHN  710 (771)
Q Consensus       658 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~-~~H~  710 (771)
                      ||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+ ++|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            5556666666666666666666666666666666666666666666664 3443

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=9.4e-13  Score=92.37  Aligned_cols=44  Identities=20%  Similarity=0.288  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.30  E-value=1.1e-12  Score=90.03  Aligned_cols=42  Identities=14%  Similarity=0.196  Sum_probs=40.9

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      |+++|+|++||.|++|+++|...+.|.+|+++|+|++||+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            789999999999999999999999999999999999999996

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.2e-12  Score=91.81  Aligned_cols=44  Identities=23%  Similarity=0.324  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999985

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=92.07  Aligned_cols=44  Identities=20%  Similarity=0.306  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=92.02  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.2e-12  Score=91.85  Aligned_cols=44  Identities=25%  Similarity=0.326  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.2e-12  Score=91.83  Aligned_cols=44  Identities=20%  Similarity=0.299  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=91.82  Aligned_cols=44  Identities=23%  Similarity=0.330  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.3e-12  Score=91.65  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=91.88  Aligned_cols=44  Identities=20%  Similarity=0.253  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.3e-12  Score=91.66  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.3e-12  Score=91.70  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=91.80  Aligned_cols=44  Identities=18%  Similarity=0.341  Sum_probs=42.4

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.5e-12  Score=91.36  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=91.67  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=42.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.6e-12  Score=91.22  Aligned_cols=44  Identities=18%  Similarity=0.261  Sum_probs=42.4

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      +|+++|++++||.|++|+++|...+.|.+|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.7e-12  Score=89.08  Aligned_cols=42  Identities=12%  Similarity=0.106  Sum_probs=40.7

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      |+++|++++||.|++|+++|...+.|.+|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            789999999999999999999999999999999999999995

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=91.45  Aligned_cols=44  Identities=23%  Similarity=0.358  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=91.44  Aligned_cols=44  Identities=23%  Similarity=0.354  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58999999999999999999999999999999999999999985

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.2e-12  Score=102.59  Aligned_cols=57  Identities=28%  Similarity=0.540  Sum_probs=26.1

Q ss_pred             hcCCCCccCC--cCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhc
Q psy13090        681 HLSSNLFRCE--KCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       681 H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      |.++++|.|+  .|++.|.++..|..|+++|+ ++++|.|++||+.|.+...|..|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHT-GQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHH-CCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhC-CCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            3444444443  24444444444444444444 244444444444444444444444444

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.5e-12  Score=91.30  Aligned_cols=44  Identities=27%  Similarity=0.350  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.6e-12  Score=91.23  Aligned_cols=44  Identities=23%  Similarity=0.297  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=90.71  Aligned_cols=43  Identities=14%  Similarity=0.213  Sum_probs=41.8

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      +|+++|++++||.|++|+++|...+.|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999999999996

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.9e-12  Score=90.75  Aligned_cols=44  Identities=27%  Similarity=0.337  Sum_probs=42.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.7e-12  Score=91.11  Aligned_cols=44  Identities=23%  Similarity=0.285  Sum_probs=42.8

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      ++++|++++||.|++|+++|...+.|.+|+++|++++||+|++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999999999999999999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.3e-12  Score=99.74  Aligned_cols=57  Identities=16%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC-CCcccchhhHHHhhhhhHhH
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS-HCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~   85 (771)
                      ...+++||.|++|+++|. .+.|..|+++ ++++||+|+ +|+++|..++.|..|+++|.
T Consensus         4 ~~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            4 GSSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             SCCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             ccCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            357899999999999999 9999999999 999999999 99999999999999998874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.9e-12  Score=90.81  Aligned_cols=44  Identities=16%  Similarity=0.221  Sum_probs=42.3

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|.+|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999973

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=90.90  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=42.4

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=89.83  Aligned_cols=43  Identities=16%  Similarity=0.202  Sum_probs=41.7

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|+|++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5899999999999999999999999999999999999999996

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=91.30  Aligned_cols=44  Identities=25%  Similarity=0.250  Sum_probs=42.6

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .+++|++++||.|++|+++|...+.|..|+++|++++||+|++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999998

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.2e-12  Score=89.54  Aligned_cols=43  Identities=19%  Similarity=0.264  Sum_probs=41.7

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|+|++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999999999999999999999999999996

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2e-12  Score=90.69  Aligned_cols=44  Identities=16%  Similarity=0.197  Sum_probs=42.4

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999974

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=4.4e-12  Score=105.16  Aligned_cols=59  Identities=20%  Similarity=0.212  Sum_probs=33.5

Q ss_pred             cCCcCCccCCCchhHHHHHHH-hcCCCCe--------eecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        688 RCEKCNLGYSRKDSFEYHMTS-HNQKEQT--------FMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       688 ~C~~C~~~F~~~~~L~~H~~~-H~~~~~~--------~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      .|++|++.|.+...|..|+++ |. ++++        |.|++|++.|.++..|..|+++|++++||.|+
T Consensus        27 ~C~~C~k~f~~~~~L~~H~~~~H~-~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           27 PKKSCDRTFSTMHELVTHVTMEHV-GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SCCCCCCCCSSHHHHHHHHHHTTT-CCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccccccccCCHHHHHHHHHHhcc-CCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344444444444444444444 33 2333        66777777777777777777777777777664

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.4e-12  Score=89.25  Aligned_cols=43  Identities=12%  Similarity=0.246  Sum_probs=41.7

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            6899999999999999999999999999999999999999996

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=2.5e-12  Score=93.60  Aligned_cols=49  Identities=18%  Similarity=0.333  Sum_probs=46.3

Q ss_pred             cccCCCCCcccccccccchhhhhhHHHHHH-hhcCCCCccCCCCcccchh
Q psy13090         25 PRIHPHKDKFMCYACYYSTYISTNMKNHIM-THTGSKPYNCSHCTFKGAS   73 (771)
Q Consensus        25 ~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~~~C~~C~~~f~~   73 (771)
                      ...|++++||.|++|++.|.....|.+|++ +|++++||+|++|++.|++
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            4 GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            357899999999999999999999999997 9999999999999999986

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=88.77  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=40.7

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNC   64 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   64 (771)
                      .|+++|+|++||.|++|+++|...+.|..|+++|+|++||+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            489999999999999999999999999999999999999998

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.5e-12  Score=89.20  Aligned_cols=43  Identities=14%  Similarity=0.145  Sum_probs=41.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5899999999999999999999999999999999999999995

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=90.24  Aligned_cols=44  Identities=20%  Similarity=0.183  Sum_probs=42.4

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcC-CCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTG-SKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~-~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++ ++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999 99999985

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=89.92  Aligned_cols=44  Identities=20%  Similarity=0.341  Sum_probs=42.4

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.5e-12  Score=88.19  Aligned_cols=42  Identities=19%  Similarity=0.364  Sum_probs=40.6

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNC   64 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   64 (771)
                      .|+++|+|++||.|++|+++|...+.|..|+++|++++||+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            1 GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999999998

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.2e-12  Score=89.59  Aligned_cols=44  Identities=18%  Similarity=0.294  Sum_probs=42.1

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48899999999999999999999999999999999999999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=90.55  Aligned_cols=44  Identities=18%  Similarity=0.248  Sum_probs=42.2

Q ss_pred             hcccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         22 VAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        22 ~~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      ..|+++|++++||.|++|+++|...+.|..|+++|++++||+|+
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            1 GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            36899999999999999999999999999999999999999996

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.23  E-value=3.7e-12  Score=87.33  Aligned_cols=41  Identities=15%  Similarity=0.156  Sum_probs=40.2

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNC   64 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   64 (771)
                      |+++|++++||.|++|+++|...++|..|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            78999999999999999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=3.7e-12  Score=88.76  Aligned_cols=43  Identities=16%  Similarity=0.217  Sum_probs=41.8

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCc
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCT   68 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~   68 (771)
                      .+|++++||.|++|+++|...+.|.+|+++|++++||.|++|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5899999999999999999999999999999999999999996

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.2e-12  Score=87.63  Aligned_cols=41  Identities=22%  Similarity=0.299  Sum_probs=40.2

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNC   64 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   64 (771)
                      |+++|++++||.|++|+++|...+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            88999999999999999999999999999999999999998

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.23  E-value=4.4e-12  Score=98.87  Aligned_cols=62  Identities=29%  Similarity=0.484  Sum_probs=57.3

Q ss_pred             cccccCCCCCcccccc--cccchhhhhhHHHHHHhhcCCCCccCCC--CcccchhhHHHhhhhhHh
Q psy13090         23 AMPRIHPHKDKFMCYA--CYYSTYISTNMKNHIMTHTGSKPYNCSH--CTFKGASSQALKYHMHVD   84 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h   84 (771)
                      .....++++++|.|++  |+++|.....|..|+++|++++||+|++  |++.|..+..|..|+++|
T Consensus         7 ~~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3456788999999998  9999999999999999999999999976  999999999999999775

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=1.1e-11  Score=102.64  Aligned_cols=60  Identities=18%  Similarity=0.271  Sum_probs=32.6

Q ss_pred             cccccccccccChhHHHHHHHH-hcCCCC--------ccCCcCCccCCCchhHHHHHHHhcCCCCeeecc
Q psy13090        659 LPCKLCGFRLKNHKQLKLHQRY-HLSSNL--------FRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCT  719 (771)
Q Consensus       659 ~~C~~C~~~f~~~~~L~~H~~~-H~~~~~--------~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  719 (771)
                      |.|++|++.|.+...|..|+++ |.++++        |.|++|++.|.++..|..|+++|+ +++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~-~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT-GEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHH-TCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcC-CCCCCCCC
Confidence            3444444444444444444444 444444        566666666666666666666665 35566654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=6e-12  Score=96.05  Aligned_cols=58  Identities=16%  Similarity=0.317  Sum_probs=32.8

Q ss_pred             CCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecc-cCCcccCChhHHHHHHhhccCCCc
Q psy13090        683 SSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCT-QCDFTSSSKDTLNTHAMVHADELK  743 (771)
Q Consensus       683 ~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~-~C~~~f~~~~~L~~H~~~H~~e~~  743 (771)
                      +++||.|++|++.|. ...|..|+++ + +++||.|+ .||+.|..++.|..|+++|.+.+|
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~-~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-C-PRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-C-SSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-c-CCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            345555555555555 5555555555 4 45555555 555555555555555555555443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.3e-12  Score=89.05  Aligned_cols=45  Identities=22%  Similarity=0.333  Sum_probs=43.2

Q ss_pred             cccccCCCCCccccc--ccccchhhhhhHHHHHHhhcCCCCccCCCC
Q psy13090         23 AMPRIHPHKDKFMCY--ACYYSTYISTNMKNHIMTHTGSKPYNCSHC   67 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   67 (771)
                      .|.++|++++||.|+  .|+++|...+.|..|+++|++++||+|++|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999998  899999999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.7e-12  Score=86.97  Aligned_cols=43  Identities=16%  Similarity=0.115  Sum_probs=41.3

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4789999999999999999999999999999999999999995

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=8.5e-12  Score=87.36  Aligned_cols=43  Identities=23%  Similarity=0.221  Sum_probs=41.3

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .+++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            5789999999999999999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.2e-12  Score=88.02  Aligned_cols=43  Identities=12%  Similarity=0.125  Sum_probs=41.5

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6899999999999999999999999999999999999999984

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.9e-12  Score=87.36  Aligned_cols=44  Identities=25%  Similarity=0.248  Sum_probs=41.7

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .+.++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 s~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            36789999999999999999999999999999999999999985

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.1e-12  Score=86.24  Aligned_cols=43  Identities=14%  Similarity=0.157  Sum_probs=41.3

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            6899999999999999999999999999999999999999983

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=1.2e-11  Score=85.15  Aligned_cols=42  Identities=17%  Similarity=0.248  Sum_probs=40.1

Q ss_pred             cccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         25 PRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        25 ~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      .++|++++||.|++|+++|...+.|..|+++|++++||+|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            2 SSGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            378999999999999999999999999999999999999985

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=1.1e-11  Score=87.72  Aligned_cols=44  Identities=18%  Similarity=0.329  Sum_probs=42.1

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcc
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTF   69 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~   69 (771)
                      ..|++++||.|++|+++|...+.|.+|+++|++++||+|++|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            46899999999999999999999999999999999999999986

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.6e-12  Score=86.68  Aligned_cols=44  Identities=27%  Similarity=0.337  Sum_probs=30.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+++.|..|+++|++++||.|++|
T Consensus         1 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSS-GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCS-SCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcC-CCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445565 46677777777777777777777777777777777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.6e-12  Score=87.35  Aligned_cols=44  Identities=25%  Similarity=0.348  Sum_probs=34.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGT-GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSS-SSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccC-CCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566776 57788888888888888888888888888888888776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.5e-12  Score=87.16  Aligned_cols=44  Identities=18%  Similarity=0.323  Sum_probs=32.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||+|++||+.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGT-GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCS-SCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcC-CCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            566666 46777777777777777777777777777777777766

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.15  E-value=1e-11  Score=86.99  Aligned_cols=44  Identities=20%  Similarity=0.325  Sum_probs=32.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGT-GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCT-TSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCC-CCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            566676 47777777777777777777777777777777777766

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=9.1e-12  Score=87.27  Aligned_cols=44  Identities=23%  Similarity=0.202  Sum_probs=33.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGT-GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSC-CCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCC-CCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566776 47778888888888888888888878888888888776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=86.67  Aligned_cols=44  Identities=16%  Similarity=0.324  Sum_probs=31.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGT-GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTS-SCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCC-CCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566666 46777777777777777777777777777777777765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.6e-12  Score=87.14  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=32.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+++.|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGT-GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSS-CCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcC-CCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566666 46777777777777777777777777777777777776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.2e-12  Score=87.22  Aligned_cols=44  Identities=18%  Similarity=0.291  Sum_probs=32.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+++.|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGT-GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCC-CSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCC-CCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            566676 47777777777777777777777777777777777776

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.1e-12  Score=87.24  Aligned_cols=44  Identities=16%  Similarity=0.275  Sum_probs=30.6

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGT-GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCS-CCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCC-CCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            555666 46677777777777777777777777777777777666

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.14  E-value=9.3e-12  Score=87.20  Aligned_cols=44  Identities=27%  Similarity=0.360  Sum_probs=30.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGM-GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSC-CCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccC-CCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            555666 46677777777777777777777777777777777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.9e-12  Score=87.07  Aligned_cols=44  Identities=18%  Similarity=0.322  Sum_probs=33.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGT-GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTT-CCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCC-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566676 47777777777777777777777777777777777776

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.8e-12  Score=87.10  Aligned_cols=44  Identities=16%  Similarity=0.274  Sum_probs=32.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCC-CCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCC-CCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566666 46777777777777777777777777777777777766

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.14  E-value=9.2e-12  Score=87.19  Aligned_cols=44  Identities=25%  Similarity=0.356  Sum_probs=25.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGT-GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCC-CCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555 35555555555555555555555555555555555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.1e-11  Score=86.93  Aligned_cols=44  Identities=25%  Similarity=0.337  Sum_probs=33.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGT-GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSS-CCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCC-CCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566676 57778888888888888888888888888888888776

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=87.06  Aligned_cols=44  Identities=20%  Similarity=0.261  Sum_probs=27.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGT-GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSS-CCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCC-CCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            455555 45666666666666666666666666666666666655

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.5e-12  Score=87.15  Aligned_cols=44  Identities=23%  Similarity=0.355  Sum_probs=30.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGT-GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSS-CCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccC-CCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556666 46667777777777777777777777777777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=86.70  Aligned_cols=44  Identities=20%  Similarity=0.335  Sum_probs=31.7

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGT-GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSS-CCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCC-CCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566666 46777777777777777777777777777777777766

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=86.39  Aligned_cols=44  Identities=18%  Similarity=0.261  Sum_probs=32.3

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGS-GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTC-CCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCC-CCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            566666 46777777777777777777777777777777777766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=87.00  Aligned_cols=44  Identities=25%  Similarity=0.280  Sum_probs=30.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||+|++||+.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGT-GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-SSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCC-CCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            556666 46677777777777777777777777777777777666

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9.8e-12  Score=87.05  Aligned_cols=44  Identities=20%  Similarity=0.288  Sum_probs=33.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGS-STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-CSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCC-CCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566676 47777777777777777777777777777777777776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=86.69  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=29.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 h~~~h~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGS-VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCC-CCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCC-CCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455665 46667777777777777777777777777777777665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.1e-11  Score=86.87  Aligned_cols=44  Identities=25%  Similarity=0.299  Sum_probs=29.7

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGT-GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCC-CCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcC-CCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455665 46667777777777777777777777777777777665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.1e-11  Score=86.91  Aligned_cols=44  Identities=18%  Similarity=0.298  Sum_probs=30.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+++.|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGS-GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSS-SSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCC-CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            555666 46677777777777777777777777777777777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.1e-11  Score=86.84  Aligned_cols=44  Identities=27%  Similarity=0.396  Sum_probs=28.6

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGT-GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSS-SSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCC-CCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455565 46666666666666666666666666666666666665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.6e-12  Score=87.10  Aligned_cols=44  Identities=18%  Similarity=0.206  Sum_probs=30.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGS-GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCS-CCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCC-CCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            556666 46677777777777777777777777777777777665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=86.59  Aligned_cols=44  Identities=25%  Similarity=0.281  Sum_probs=29.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|.+|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGA-GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSS-CCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcC-CCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            455665 46667777777777777777777777777777777665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=86.64  Aligned_cols=44  Identities=18%  Similarity=0.284  Sum_probs=30.5

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGS-GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSC-CCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccC-CCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            555666 46677777777777777777777777777777777666

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.4e-11  Score=86.25  Aligned_cols=45  Identities=22%  Similarity=0.328  Sum_probs=35.4

Q ss_pred             HHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        704 YHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       704 ~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      .|+++|+ +++||.|++||+.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGS-GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCC-CCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCC-CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667777 57788888888888888888888888888888888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.13  E-value=1.3e-11  Score=86.46  Aligned_cols=44  Identities=20%  Similarity=0.250  Sum_probs=32.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGT-GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCC-CCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCC-CCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            566676 46777777777777777777777777777777777776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1e-11  Score=86.96  Aligned_cols=44  Identities=20%  Similarity=0.343  Sum_probs=29.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGT-GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCS-CCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCC-CCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            555665 46667777777777777777777777777777777665

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=86.56  Aligned_cols=44  Identities=23%  Similarity=0.256  Sum_probs=30.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGT-GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCC-CCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            555665 46667777777777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=86.66  Aligned_cols=44  Identities=20%  Similarity=0.233  Sum_probs=29.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGT-GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCC-CCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccC-CCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455565 46666666666666666666666666666666666665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.2e-11  Score=86.56  Aligned_cols=44  Identities=20%  Similarity=0.226  Sum_probs=33.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGS-GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCC-CCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566676 47777777777777777777777777777777777776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.12  E-value=1.7e-11  Score=85.84  Aligned_cols=44  Identities=20%  Similarity=0.245  Sum_probs=21.7

Q ss_pred             HHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcC
Q psy13090        649 HMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKC  692 (771)
Q Consensus       649 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  692 (771)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444555555555555555555555555554455554444

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.8e-12  Score=87.08  Aligned_cols=44  Identities=18%  Similarity=0.276  Sum_probs=30.3

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCC-CCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            555666 46677777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.5e-11  Score=86.14  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=30.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGS-GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCC-CCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCC-CCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            455666 46777777777777777777777777777777777766

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=86.54  Aligned_cols=44  Identities=25%  Similarity=0.319  Sum_probs=35.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGT-GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCS-SCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCC-CCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            566776 57788888888888888888888888888888888776

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2.5e-11  Score=82.58  Aligned_cols=40  Identities=23%  Similarity=0.253  Sum_probs=38.7

Q ss_pred             cccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccC
Q psy13090         25 PRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNC   64 (771)
Q Consensus        25 ~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   64 (771)
                      .++|++++||.|++|+++|...+.|..|+++|++++||+|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CSSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4799999999999999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.3e-11  Score=86.53  Aligned_cols=44  Identities=20%  Similarity=0.317  Sum_probs=27.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGT-GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCS-SCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCC-CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455555 45666666666666666666666666666666666655

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=4.1e-11  Score=87.06  Aligned_cols=44  Identities=30%  Similarity=0.409  Sum_probs=36.5

Q ss_pred             CCCeeecccCCcccCChhHHHHHHh-hccCCCccccCCCCCccch
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAM-VHADELKFSCQNCDFKCSK  755 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~e~~~~C~~C~~~f~~  755 (771)
                      +++||.|++|++.|.+...|..|++ +|++++||.|++|++.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            5778888888888888888888886 8888888888888888875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.4e-11  Score=86.28  Aligned_cols=44  Identities=25%  Similarity=0.329  Sum_probs=32.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGS-GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCC-SSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccC-CCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            556666 46777777777777777777777777777777777766

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.6e-11  Score=85.96  Aligned_cols=44  Identities=16%  Similarity=0.218  Sum_probs=29.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++||+.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGS-REKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSS-CCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccC-CCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455665 46667777777777777777777777777777777665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-11  Score=86.87  Aligned_cols=44  Identities=23%  Similarity=0.324  Sum_probs=34.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGT-GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCS-SCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566776 57778888888888888888888888888888888776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.11  E-value=1.9e-11  Score=85.52  Aligned_cols=44  Identities=23%  Similarity=0.261  Sum_probs=31.7

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 h~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGA-GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSC-CCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455666 46777777777777777777777777777777777766

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.2e-11  Score=85.29  Aligned_cols=44  Identities=14%  Similarity=0.298  Sum_probs=21.9

Q ss_pred             HHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccC
Q psy13090        677 HQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQC  721 (771)
Q Consensus       677 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  721 (771)
                      |+++|++++||.|++|++.|.+++.|..|+++|+ +++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT-GERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHS-CCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcC-CCCCCCCCCC
Confidence            4444455555555555555555555555555554 3445555444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=85.56  Aligned_cols=44  Identities=20%  Similarity=0.337  Sum_probs=31.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGT-GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSS-CCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCC-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566666 46777777777777777777777777777777777664

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.10  E-value=3.4e-12  Score=95.80  Aligned_cols=56  Identities=14%  Similarity=0.283  Sum_probs=43.6

Q ss_pred             HHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhh
Q psy13090        702 FEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRN  761 (771)
Q Consensus       702 L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~  761 (771)
                      |..|+++|+ +++||.|++||+.|.+...|.   ++|++++||.|++||+.|...+++..
T Consensus         2 L~~h~~~H~-~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            2 IETDERDST-NRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCCCSSSCC-SSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhhHHHHcC-CCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            345777777 578888888888888877776   78888888888888888887776653

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=85.67  Aligned_cols=44  Identities=20%  Similarity=0.271  Sum_probs=30.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 h~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGS-GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCC-SCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCC-CCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            455565 46677777777777777777777777777777777666

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.2e-11  Score=84.35  Aligned_cols=43  Identities=16%  Similarity=0.201  Sum_probs=20.7

Q ss_pred             HhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcC
Q psy13090        650 MGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKC  692 (771)
Q Consensus       650 ~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  692 (771)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444444444444444444444444444444444444444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3e-11  Score=84.54  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=30.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGS-GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCC-CCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCC-CCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455666 46677777777777777777777777777777777654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.8e-11  Score=85.16  Aligned_cols=44  Identities=16%  Similarity=0.192  Sum_probs=30.6

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHh-hccCCCccccCCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAM-VHADELKFSCQNC  749 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~e~~~~C~~C  749 (771)
                      |+++|+ +++||.|++|++.|.+...|..|++ +|++++||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGT-GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCC-CCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccC-CCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            555666 4667777777777777777777777 7777777777666

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=2.4e-11  Score=94.79  Aligned_cols=66  Identities=17%  Similarity=0.183  Sum_probs=60.5

Q ss_pred             hhhhcccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHHH
Q psy13090         19 RACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQ   87 (771)
Q Consensus        19 ~~~~~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (771)
                      ..|..|+++|++++||.|+.|++.|. .+.|..|+ +|.+++||.|+.|++.|. ...|..|+++|+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            46889999999999999999999995 89999999 999999999999999987 59999999888653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.06  E-value=2.7e-11  Score=88.07  Aligned_cols=45  Identities=18%  Similarity=0.196  Sum_probs=33.9

Q ss_pred             hhhhcccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCcc
Q psy13090         19 RACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYN   63 (771)
Q Consensus        19 ~~~~~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   63 (771)
                      .+|..|+++|+|++||.|++|+++|...+.|..|+++|+|++||.
T Consensus        10 ~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           10 PGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             SCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            346777777777777777777777777777777777777777763

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.05  E-value=3.9e-11  Score=87.22  Aligned_cols=52  Identities=13%  Similarity=0.040  Sum_probs=39.3

Q ss_pred             CccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccc
Q psy13090        693 NLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFS  745 (771)
Q Consensus       693 ~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~  745 (771)
                      ++.|.....|..|+++|+ +++||.|++||+.|.+.+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-SEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-SSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcC-CCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            356777777777777777 4777888888888888888888877787777763

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.05  E-value=1.3e-10  Score=90.46  Aligned_cols=49  Identities=22%  Similarity=0.499  Sum_probs=21.2

Q ss_pred             Ceeeccc--CCcccCChhHHHHHHhhccCCCccccCC--CCCccchhhhhhhH
Q psy13090        714 QTFMCTQ--CDFTSSSKDTLNTHAMVHADELKFSCQN--CDFKCSKLSCVRNV  762 (771)
Q Consensus       714 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~e~~~~C~~--C~~~f~~~~~l~~H  762 (771)
                      ++|.|++  |++.|.+...|..|+++|++++||.|++  |++.|..+..|..|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H   68 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH   68 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHH
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhH
Confidence            3444444  4444444444444444444444444432  44444444444444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.03  E-value=6.1e-11  Score=81.10  Aligned_cols=42  Identities=26%  Similarity=0.389  Sum_probs=30.3

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||+|++|++.|.+...|..|+++|++++||.|+
T Consensus         1 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSS-GENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSS-SCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCC-CCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455666 467777777777777777777777777777777774

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.5e-10  Score=81.72  Aligned_cols=40  Identities=20%  Similarity=0.296  Sum_probs=35.2

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCC
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDF  751 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~  751 (771)
                      ++++|.|++|++.|.+...|..|+++|++++||.|++|||
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            5788999999999999999999998999899999998886

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.02  E-value=6.3e-11  Score=82.85  Aligned_cols=43  Identities=26%  Similarity=0.363  Sum_probs=29.5

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGT-GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCC-CCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCC-CCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556666 4667777777777777777777777777777777653

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=7.4e-11  Score=82.49  Aligned_cols=42  Identities=19%  Similarity=0.284  Sum_probs=28.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||+|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGT-GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCC-CSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccC-CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            555665 466666666777776666676776666666666665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.8e-11  Score=82.40  Aligned_cols=43  Identities=19%  Similarity=0.344  Sum_probs=29.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGT-GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSC-CCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCC-CCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            555666 4667777777777777777777777777777777653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8e-11  Score=82.32  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=31.5

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGT-GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSC-CCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcC-CCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566666 4677777777777777777777777777777777753

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.8e-11  Score=82.38  Aligned_cols=43  Identities=21%  Similarity=0.300  Sum_probs=29.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGT-GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCS-SCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCC-CCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555666 4667777777777777777777777777777777653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.6e-11  Score=82.44  Aligned_cols=42  Identities=19%  Similarity=0.301  Sum_probs=27.6

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||+|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCC-CCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCC-CCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            455565 466666666666666666666666666666666665

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.2e-11  Score=82.03  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=30.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ ++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGT-GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCS-SCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccC-CCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            556666 4677777777777777777777777777777777753

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.7e-11  Score=80.30  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=25.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      |+++|+ +++||.|++|++.|.+.+.|..|+++|++++||.|
T Consensus         1 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSS-GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSC-SCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcC-CCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344555 45666666666666666666666666666666665

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.2e-11  Score=82.28  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=28.6

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGT-GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCC-SCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCC-CCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555665 466677777777777777777777777777777665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.1e-11  Score=82.31  Aligned_cols=42  Identities=21%  Similarity=0.312  Sum_probs=27.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGT-GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSS-SSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555665 466666666666666666666666666666666665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.9e-11  Score=82.10  Aligned_cols=43  Identities=23%  Similarity=0.396  Sum_probs=32.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGT-GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCC-SCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCC-CCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            566776 4777888888888888888888888888888887764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.9e-11  Score=82.09  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=30.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGT-GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSC-CCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCC-CCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556666 4677777777777777777777777777777777753

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.3e-11  Score=81.97  Aligned_cols=42  Identities=24%  Similarity=0.376  Sum_probs=30.3

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGS-GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCC-CSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCC-CCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            556666 467777777777777777777777777777777775

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.2e-11  Score=82.03  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=26.7

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGT-GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCS-SCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCC-CCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555 456666666666666666666666666666666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8.5e-11  Score=82.21  Aligned_cols=43  Identities=19%  Similarity=0.306  Sum_probs=28.7

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGT-GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSS-CCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcC-CCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            555665 4666777777777777777777777777777776653

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.5e-11  Score=81.95  Aligned_cols=42  Identities=19%  Similarity=0.316  Sum_probs=31.0

Q ss_pred             HHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        707 TSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       707 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      ++|+ +++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         5 ~~h~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGT-GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSST-TCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCC-CCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4555 46777777777777777777777777777777777776

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8.8e-11  Score=82.08  Aligned_cols=43  Identities=21%  Similarity=0.271  Sum_probs=30.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||+|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 h~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGT-GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCS-SCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCC-CCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            455666 4677777777777777777777777777777777753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.7e-11  Score=81.89  Aligned_cols=42  Identities=26%  Similarity=0.309  Sum_probs=28.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGM-GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCC-CCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455665 466677777777777777777776677777777665

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.8e-11  Score=81.88  Aligned_cols=43  Identities=21%  Similarity=0.345  Sum_probs=31.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|++
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGT-GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCC-CCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCC-CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566676 4777777777777777777777777777777777753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8e-11  Score=82.32  Aligned_cols=42  Identities=19%  Similarity=0.316  Sum_probs=27.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCS-CCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCC-CCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            455555 466666666666666666666666666666666664

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=2.1e-10  Score=79.66  Aligned_cols=41  Identities=20%  Similarity=0.379  Sum_probs=28.7

Q ss_pred             hcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCC
Q psy13090        709 HNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD  750 (771)
Q Consensus       709 H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~  750 (771)
                      |+ +++||+|++|++.|.++..|..|+++|++++||.|++||
T Consensus         5 h~-~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SS-GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CS-SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cC-CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44 466777777777777777777777777777777777765

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.7e-11  Score=81.91  Aligned_cols=42  Identities=21%  Similarity=0.390  Sum_probs=28.5

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGT-GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCC-CSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccC-CCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555665 466677777777777777777777777777777665

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1e-10  Score=81.70  Aligned_cols=42  Identities=24%  Similarity=0.292  Sum_probs=30.7

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGT-GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCS-SCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCC-CCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566666 467777777777777777777777777777777775

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1e-10  Score=80.90  Aligned_cols=42  Identities=26%  Similarity=0.354  Sum_probs=30.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGT-GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSS-SCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccC-CCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566666 467777777777777777777777777777777764

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=80.44  Aligned_cols=42  Identities=24%  Similarity=0.351  Sum_probs=29.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||+|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGT-GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCS-CCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCC-CCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            556666 467777777777777777777777777777777763

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=1.6e-11  Score=98.84  Aligned_cols=62  Identities=8%  Similarity=0.083  Sum_probs=52.6

Q ss_pred             hhhcccccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhH
Q psy13090         20 ACVAMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        20 ~~~~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (771)
                      .++.+.++|++++||.|++|+++|...+.|..|+++|++++||+|..|.    ....|..|.++|.
T Consensus        12 ~~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~   73 (88)
T 1x6f_A           12 FIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYAD   73 (88)
T ss_dssp             CCCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCC
T ss_pred             eeeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccc
Confidence            3456678999999999999999999999999999999999999998764    4566777766653

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=81.28  Aligned_cols=42  Identities=21%  Similarity=0.339  Sum_probs=30.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||+|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGT-GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCC-SCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccC-CCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            566666 467777777777777777777777777777777775

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=80.63  Aligned_cols=42  Identities=24%  Similarity=0.303  Sum_probs=28.4

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGT-GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSS-SSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCC-CCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            555665 466677777777777777777777777777777663

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.3e-10  Score=81.21  Aligned_cols=43  Identities=26%  Similarity=0.373  Sum_probs=32.7

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccC-CCccccCC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHAD-ELKFSCQN  748 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-e~~~~C~~  748 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++ ++||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQ-KEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCC-CSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccC-CCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566676 57778888888888888888888888887 78887764

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.5e-10  Score=80.02  Aligned_cols=42  Identities=26%  Similarity=0.369  Sum_probs=28.8

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGA-GENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCS-CCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccC-CCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            556665 466777777777777777777777777777777663

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.6e-10  Score=79.86  Aligned_cols=43  Identities=21%  Similarity=0.296  Sum_probs=34.0

Q ss_pred             HHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        704 YHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       704 ~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      .|+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGH-TRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCC-CCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccC-CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3667777 578888888888888888888888888888888874

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.4e-10  Score=79.29  Aligned_cols=41  Identities=22%  Similarity=0.287  Sum_probs=31.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      |+++|+ +++||.|++|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSG-GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCS-SSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccC-CCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            455666 57778888888888888888888778887777776

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.95  E-value=1.7e-10  Score=78.77  Aligned_cols=41  Identities=20%  Similarity=0.298  Sum_probs=28.9

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      |+++|+ +++||.|++|++.|.+++.|..|+++|++++||.|
T Consensus         2 H~~~H~-~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSG-GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCC-SSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCC-CCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            445566 46777777777777777777777777777777766

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.1e-10  Score=79.71  Aligned_cols=41  Identities=29%  Similarity=0.344  Sum_probs=30.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      |+++|+ +++||.|++||+.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSG-GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCC-SCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccC-CCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            556666 46777777777777777777777777777777776

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=80.52  Aligned_cols=42  Identities=24%  Similarity=0.324  Sum_probs=29.0

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 h~~~h~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGT-GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCC-CSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcC-CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445566 466777777777777777777777777777777765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.3e-10  Score=79.91  Aligned_cols=41  Identities=15%  Similarity=0.161  Sum_probs=19.3

Q ss_pred             hccCCCccccccccccccChhHHHHHHHHhcCCCCccCCcC
Q psy13090        652 FHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKC  692 (771)
Q Consensus       652 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  692 (771)
                      +|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.9e-10  Score=79.42  Aligned_cols=42  Identities=19%  Similarity=0.249  Sum_probs=20.8

Q ss_pred             HHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCC
Q psy13090        649 HMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCE  690 (771)
Q Consensus       649 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  690 (771)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444455555555555555555555555555555555443

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=79.45  Aligned_cols=41  Identities=20%  Similarity=0.313  Sum_probs=29.3

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSG-GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCC-SSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccC-CCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            455666 46777777777777777777777777777777766

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=80.53  Aligned_cols=42  Identities=24%  Similarity=0.383  Sum_probs=30.6

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGT-GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSC-CCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCC-CCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666 467777777777777777777777777777777775

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=4.6e-10  Score=82.08  Aligned_cols=41  Identities=17%  Similarity=0.286  Sum_probs=37.4

Q ss_pred             ccCCCCCcccccc--cccchhhhhhHHHHH-HhhcCCCCccCCC
Q psy13090         26 RIHPHKDKFMCYA--CYYSTYISTNMKNHI-MTHTGSKPYNCSH   66 (771)
Q Consensus        26 r~H~~~k~~~C~~--C~~~f~~~~~l~~H~-~~H~~~~~~~C~~   66 (771)
                      -..+|||||.|++  |+++|..+++|.+|+ ++|+++|||-|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3689999999975  999999999999998 6899999999975

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.6e-10  Score=74.66  Aligned_cols=37  Identities=19%  Similarity=0.195  Sum_probs=34.6

Q ss_pred             cccCCCCCcccccccccchhhhhhHHHHHHhhcCCCC
Q psy13090         25 PRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKP   61 (771)
Q Consensus        25 ~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   61 (771)
                      +++|++++||.|++|+++|...+.|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.2e-10  Score=79.17  Aligned_cols=42  Identities=19%  Similarity=0.203  Sum_probs=20.9

Q ss_pred             HHhhccCCCccccccccccccChhHHHHHHHHhcCCCCccCC
Q psy13090        649 HMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCE  690 (771)
Q Consensus       649 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  690 (771)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444555555555555555555555555555555555443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.8e-10  Score=79.63  Aligned_cols=42  Identities=17%  Similarity=0.267  Sum_probs=31.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGT-DSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCC-CCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCC-CCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566676 477777777777777777777777777777777763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.8e-10  Score=80.53  Aligned_cols=42  Identities=21%  Similarity=0.236  Sum_probs=27.1

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccC
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQ  747 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~  747 (771)
                      |+++|+ +++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGT-GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSC-CCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccC-CCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455565 466666666666666666666666666666666664

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.90  E-value=6.6e-10  Score=73.37  Aligned_cols=37  Identities=22%  Similarity=0.157  Sum_probs=32.8

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      .|+++|+|++||.|++|+++|...+.|..|+++|+|+
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            4788999999999999999999999999999999875

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.6e-10  Score=79.62  Aligned_cols=42  Identities=19%  Similarity=0.457  Sum_probs=21.3

Q ss_pred             HHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecc
Q psy13090        677 HQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCT  719 (771)
Q Consensus       677 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  719 (771)
                      |+++|++++||.|++|++.|.+...|..|+++|+ +++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS-REKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHH-HTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhC-CCCCCCCC
Confidence            3444555555555555555555555555555554 34555553

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.90  E-value=5.4e-10  Score=74.80  Aligned_cols=38  Identities=11%  Similarity=0.129  Sum_probs=35.0

Q ss_pred             CCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCC
Q psy13090         28 HPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCS   65 (771)
Q Consensus        28 H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   65 (771)
                      |++++||.|++|+++|...+.|..|+++|+|++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            78999999999999999999999999999999999763

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.6e-10  Score=77.47  Aligned_cols=41  Identities=24%  Similarity=0.255  Sum_probs=29.2

Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      |+++|+ +++||.|++|++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGS-GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCC-CCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccC-CCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            556666 46777777777777777777777777777777766

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=6.5e-10  Score=76.73  Aligned_cols=40  Identities=20%  Similarity=0.212  Sum_probs=19.9

Q ss_pred             HhhccCCCccccccccccccChhHHHHHHHHhcCCCCccC
Q psy13090        650 MGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRC  689 (771)
Q Consensus       650 ~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  689 (771)
                      +++|.+++||.|++|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3444445555555555555555555555555555555544

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.5e-10  Score=78.84  Aligned_cols=43  Identities=26%  Similarity=0.352  Sum_probs=32.2

Q ss_pred             HHHhcCCCCeeecc--cCCcccCChhHHHHHHhhccCCCccccCCC
Q psy13090        706 MTSHNQKEQTFMCT--QCDFTSSSKDTLNTHAMVHADELKFSCQNC  749 (771)
Q Consensus       706 ~~~H~~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C  749 (771)
                      .++|+ +++||+|+  .|++.|.++..|..|+++|++++||.|++|
T Consensus         4 ~~~H~-~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGT-GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSC-CCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcC-CCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34566 47777776  788888888888888778887788887776

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.8e-10  Score=77.43  Aligned_cols=41  Identities=27%  Similarity=0.429  Sum_probs=31.1

Q ss_pred             HHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        707 TSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       707 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      ++|+ +++||+|++|++.|.+...|..|+++|++++||.|++
T Consensus         5 ~~h~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGT-GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCC-SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCC-CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4565 5777888888888888888888888888888887763

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=1.8e-09  Score=74.02  Aligned_cols=38  Identities=18%  Similarity=0.227  Sum_probs=19.9

Q ss_pred             ccCCCccccccccccccChhHHHHHHHHhcCCCCccCC
Q psy13090        653 HNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCE  690 (771)
Q Consensus       653 H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  690 (771)
                      |++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44455555555555555555555555555555555554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.8e-10  Score=89.75  Aligned_cols=65  Identities=23%  Similarity=0.304  Sum_probs=35.2

Q ss_pred             HHHHHHHHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        673 QLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       673 ~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      .|..|+++|.+++|+.|+.|++.|. ...|..|+ .|. +++||.|+.|++.|. ...|..|+++|+++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c-~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYC-GARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHH-HHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHc-CCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            3444555555555555555555552 55555555 554 355555555555544 35555555555544

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.5e-09  Score=73.53  Aligned_cols=38  Identities=18%  Similarity=0.363  Sum_probs=30.3

Q ss_pred             HhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        708 SHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       708 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      +|+ +++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         4 ~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSS-GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCC-CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccC-CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            455 57788888888888888888888888888888877

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.7e-09  Score=75.44  Aligned_cols=39  Identities=18%  Similarity=0.213  Sum_probs=20.0

Q ss_pred             hccCCCccccccccccccChhHHHHHHHHhcCCCCccCC
Q psy13090        652 FHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCE  690 (771)
Q Consensus       652 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  690 (771)
                      +|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555555555555555555555543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.80  E-value=2e-09  Score=69.94  Aligned_cols=35  Identities=17%  Similarity=0.328  Sum_probs=31.5

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHHhhcCCCC
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKP   61 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   61 (771)
                      +|+|++||.|++|+++|...+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            58899999999999999999999999999998875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.79  E-value=2.3e-09  Score=69.66  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=31.5

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHHhhcCCCC
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKP   61 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   61 (771)
                      +|+|++||.|++|+++|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            58899999999999999999999999999998876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=1.5e-10  Score=93.19  Aligned_cols=57  Identities=14%  Similarity=0.299  Sum_probs=34.3

Q ss_pred             HHhcCCCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccC
Q psy13090        679 RYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHAD  740 (771)
Q Consensus       679 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  740 (771)
                      ++|++++||.|++|++.|.+...|..|+++|+ +++||+|..|.    ....|..|.++|.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht-~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN-EEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHH-HHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC-CCCCcccchhh----hHHHHHhhhccccc
Confidence            34666666666666666666666666666666 45666665443    34455556666655

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=3.7e-09  Score=69.62  Aligned_cols=35  Identities=23%  Similarity=0.444  Sum_probs=30.9

Q ss_pred             cccCCCCCcccccccccchhhhhhHHHH-HHhhcCC
Q psy13090         25 PRIHPHKDKFMCYACYYSTYISTNMKNH-IMTHTGS   59 (771)
Q Consensus        25 ~r~H~~~k~~~C~~C~~~f~~~~~l~~H-~~~H~~~   59 (771)
                      +++|+|++||.|++|+++|...+.|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            5789999999999999999999999999 8888875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.6e-09  Score=68.79  Aligned_cols=33  Identities=24%  Similarity=0.317  Sum_probs=27.9

Q ss_pred             cCCCCCcccccc--cccchhhhhhHHHHHHhhcCC
Q psy13090         27 IHPHKDKFMCYA--CYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        27 ~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      .++||+||.|++  |+++|..++.|++|+++|+|+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467888888876  888888888888888888876

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4.6e-09  Score=69.23  Aligned_cols=35  Identities=20%  Similarity=0.404  Sum_probs=29.7

Q ss_pred             ccCCCCCcccccccccchhhh-hhHHHHHHhhcCCC
Q psy13090         26 RIHPHKDKFMCYACYYSTYIS-TNMKNHIMTHTGSK   60 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~-~~l~~H~~~H~~~~   60 (771)
                      ++|++++||.|++|+++|... +.|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            678888888888888888888 88888888888764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=5.9e-09  Score=69.13  Aligned_cols=36  Identities=14%  Similarity=0.275  Sum_probs=31.6

Q ss_pred             CCCCCccccc--ccccchhhhhhHHHHHHhhcCCCCcc
Q psy13090         28 HPHKDKFMCY--ACYYSTYISTNMKNHIMTHTGSKPYN   63 (771)
Q Consensus        28 H~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~   63 (771)
                      |+|++||.|+  .|+++|...++|.+|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6889999999  59999999999999999999998873

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.67  E-value=2.6e-09  Score=70.46  Aligned_cols=35  Identities=31%  Similarity=0.515  Sum_probs=33.1

Q ss_pred             HHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHH
Q psy13090         52 HIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDML   86 (771)
Q Consensus        52 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   86 (771)
                      |+++|+|++||+|++|++.|..++.|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            78899999999999999999999999999999864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.67  E-value=8.7e-09  Score=65.77  Aligned_cols=33  Identities=24%  Similarity=0.252  Sum_probs=30.3

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCCCccC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSKPYNC   64 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   64 (771)
                      +||.|++|+++|...++|..|+++|+|++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            689999999999999999999999999999863

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.1e-08  Score=66.89  Aligned_cols=35  Identities=29%  Similarity=0.507  Sum_probs=30.4

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +.|++++||+|++|+++|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            57889999999999999999999999999998864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1e-08  Score=67.03  Aligned_cols=35  Identities=11%  Similarity=0.129  Sum_probs=30.2

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +.|++++||.|++|+++|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            56888999999999999999999999999888864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.65  E-value=1.5e-08  Score=67.52  Aligned_cols=35  Identities=20%  Similarity=0.319  Sum_probs=28.8

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCCCcccc
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSC  746 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C  746 (771)
                      +++||.|++||+.|.+.+.|..|+++|++++||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            57788888888888888888888888888888875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.64  E-value=5.5e-09  Score=73.05  Aligned_cols=41  Identities=20%  Similarity=0.314  Sum_probs=34.3

Q ss_pred             hhhcccccCCCCCccccc--ccccchhhhhhHHHHHHhhcCCC
Q psy13090         20 ACVAMPRIHPHKDKFMCY--ACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        20 ~~~~h~r~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +++.|+.+|+|++||.|+  .|+++|...++|.+|+++|+|++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            456667789999999995  79999999999999999998874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.6e-08  Score=66.07  Aligned_cols=35  Identities=29%  Similarity=0.580  Sum_probs=30.2

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      .+|++++||.|++|+++|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            46888999999999999999999999999998874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.61  E-value=9.4e-09  Score=66.12  Aligned_cols=32  Identities=28%  Similarity=0.624  Sum_probs=28.6

Q ss_pred             CCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         28 HPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        28 H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      ++|||||.|++|+++|+.+++|.+|+       ||.|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            57899999999999999999999998       888875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.1e-08  Score=64.64  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=29.9

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      .+|++++||.|++|++.|...+.|..|+++|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            36888889999999999998889999998888874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=1.8e-08  Score=66.29  Aligned_cols=35  Identities=17%  Similarity=0.409  Sum_probs=20.2

Q ss_pred             HhcCCCCeeecccCCcccCChhHHHHHHhhccCCCc
Q psy13090        708 SHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELK  743 (771)
Q Consensus       708 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~  743 (771)
                      +|+ +++||.|++|++.|.+...|..|+++|++++|
T Consensus         3 ~h~-~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGS-SGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCC-CCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCC-CCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            344 35566666666666666666666666665543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.54  E-value=3.7e-08  Score=62.74  Aligned_cols=32  Identities=22%  Similarity=0.300  Sum_probs=22.7

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCCCccc
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADELKFS  745 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~  745 (771)
                      +||.|++||+.|.+.+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36777777777777777777777777777764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.54  E-value=1.1e-08  Score=64.83  Aligned_cols=32  Identities=25%  Similarity=0.235  Sum_probs=28.9

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCCCcc
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSKPYN   63 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   63 (771)
                      +||.|++|+++|...+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            68999999999999999999999999999873

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.54  E-value=2.2e-08  Score=70.26  Aligned_cols=34  Identities=12%  Similarity=0.212  Sum_probs=24.0

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHH-hhcCCC
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIM-THTGSK   60 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~~   60 (771)
                      +|+|++||.|++|+++|....+|..|++ +|+|+.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            5777777777777777777777777777 777754

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=4.3e-08  Score=71.73  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=24.5

Q ss_pred             CCCeeeccc--CCcccCChhHHHHHH-hhccCCCccccC
Q psy13090        712 KEQTFMCTQ--CDFTSSSKDTLNTHA-MVHADELKFSCQ  747 (771)
Q Consensus       712 ~~~~~~C~~--C~~~f~~~~~L~~H~-~~H~~e~~~~C~  747 (771)
                      +++||+|+.  |+++|.+.+.|..|+ ++|++++||.|.
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            467777754  777777777777775 467777777664

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=5.2e-08  Score=63.55  Aligned_cols=34  Identities=21%  Similarity=0.340  Sum_probs=28.9

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      .|++++||.|++|++.|...+.|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5788888888888888888888888888888764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.48  E-value=7.2e-08  Score=62.34  Aligned_cols=32  Identities=16%  Similarity=0.202  Sum_probs=20.1

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCCCc
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELK  743 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~  743 (771)
                      +++||.|++|++.|.+...|..|+++|++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            45666666666666666666666666666554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.48  E-value=7.9e-08  Score=62.16  Aligned_cols=32  Identities=28%  Similarity=0.508  Sum_probs=21.6

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCCCc
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELK  743 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~  743 (771)
                      +++||.|++|++.|.+...|..|+++|++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            46667777777777777777777766666654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.46  E-value=5.5e-08  Score=63.84  Aligned_cols=34  Identities=21%  Similarity=0.370  Sum_probs=25.6

Q ss_pred             cCCCCCcccccc--cccchhhhhhHHHHHHhhcCCC
Q psy13090         27 IHPHKDKFMCYA--CYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        27 ~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      .|+|++||.|++  |+++|...+.|.+|+++|+|++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367778888874  8888887888888887777764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=3.1e-08  Score=65.11  Aligned_cols=34  Identities=15%  Similarity=0.293  Sum_probs=31.6

Q ss_pred             HhhcCCCCccCCCCcccchhh-HHHhhhhhHhHHH
Q psy13090         54 MTHTGSKPYNCSHCTFKGASS-QALKYHMHVDMLQ   87 (771)
Q Consensus        54 ~~H~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~   87 (771)
                      ++|++++||+|++|++.|.++ +.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            479999999999999999999 9999999999864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=2.1e-07  Score=61.45  Aligned_cols=33  Identities=33%  Similarity=0.657  Sum_probs=24.6

Q ss_pred             CCCeeecc--cCCcccCChhHHHHHHhhccCCCcc
Q psy13090        712 KEQTFMCT--QCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       712 ~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      +++||.|+  .|++.|.+.+.|..|+++|++++||
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            46777777  4777777777777777777777776

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=2.9e-07  Score=60.12  Aligned_cols=29  Identities=24%  Similarity=0.532  Sum_probs=15.3

Q ss_pred             cCCCCccCCc--CCccCCCchhHHHHHHHhc
Q psy13090        682 LSSNLFRCEK--CNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       682 ~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~  710 (771)
                      ++++||+|++  |+++|.+++.|..|+++|+
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            4455555543  5555555555555555554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.33  E-value=7.2e-08  Score=67.58  Aligned_cols=35  Identities=23%  Similarity=0.452  Sum_probs=29.9

Q ss_pred             hhcCCCCccCCCCcccchhhHHHhhhhh-HhHHHHH
Q psy13090         55 THTGSKPYNCSHCTFKGASSQALKYHMH-VDMLQYL   89 (771)
Q Consensus        55 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~   89 (771)
                      +|+|++||+|++|++.|..+++|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 8986543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=1.9e-07  Score=61.20  Aligned_cols=33  Identities=27%  Similarity=0.612  Sum_probs=17.9

Q ss_pred             HhcCCCCeeecccCCcccCChhHHHHH-HhhccCC
Q psy13090        708 SHNQKEQTFMCTQCDFTSSSKDTLNTH-AMVHADE  741 (771)
Q Consensus       708 ~H~~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~e  741 (771)
                      +|+ +++||+|+.|++.|.+++.|..| +++|+++
T Consensus         3 ~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGS-SGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSS-SSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccC-CCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            344 35555555555555555555555 5555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.8e-07  Score=59.95  Aligned_cols=30  Identities=20%  Similarity=0.423  Sum_probs=19.3

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +++||+|++|++.|.+.+.|..|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            456666666666666666666666666655

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=4.5e-07  Score=67.51  Aligned_cols=43  Identities=9%  Similarity=0.030  Sum_probs=32.5

Q ss_pred             cccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCc
Q psy13090         25 PRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCT   68 (771)
Q Consensus        25 ~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~   68 (771)
                      ...|+++|||.|.+|+++|...+.|..|+++|+++. ..+.+++
T Consensus         5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            346778888888888888888888888888888763 4555554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=4e-08  Score=68.59  Aligned_cols=40  Identities=13%  Similarity=0.286  Sum_probs=34.9

Q ss_pred             hHHHHHHhhcCCCCccCC--CCcccchhhHHHhhhhhHhHHH
Q psy13090         48 NMKNHIMTHTGSKPYNCS--HCTFKGASSQALKYHMHVDMLQ   87 (771)
Q Consensus        48 ~l~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~   87 (771)
                      .+..|+.+|+|++||+|+  .|++.|..+++|+.|+++|+++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            345566789999999996  7999999999999999999864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.27  E-value=4.1e-07  Score=58.37  Aligned_cols=30  Identities=37%  Similarity=0.753  Sum_probs=22.1

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      +++||+|++||++|.+++.|.+|+       ||.|..
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            577777777777777777777776       677654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.27  E-value=4e-08  Score=62.08  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=24.4

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCCCcc
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      +||+|++||+.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4677888888888888888888888888776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.26  E-value=2.3e-07  Score=60.83  Aligned_cols=33  Identities=15%  Similarity=0.156  Sum_probs=30.5

Q ss_pred             hhcCCCCccCCC--CcccchhhHHHhhhhhHhHHH
Q psy13090         55 THTGSKPYNCSH--CTFKGASSQALKYHMHVDMLQ   87 (771)
Q Consensus        55 ~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   87 (771)
                      .|++++||+|++  |++.|.+++.|..|+++|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            488999999995  999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=3.4e-07  Score=56.56  Aligned_cols=30  Identities=27%  Similarity=0.316  Sum_probs=24.8

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      ++||.|++|+++|...+.|..|+++|+|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            578888888888888888888888888764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=5.8e-07  Score=58.36  Aligned_cols=30  Identities=20%  Similarity=0.538  Sum_probs=16.1

Q ss_pred             hcCCCCccCCcCCccCCCchhHHHHHHHhc
Q psy13090        681 HLSSNLFRCEKCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       681 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~  710 (771)
                      |++++||.|++|++.|.....|..|+++|+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            445555555555555555555555555554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=5.3e-07  Score=58.56  Aligned_cols=30  Identities=27%  Similarity=0.563  Sum_probs=16.5

Q ss_pred             hcCCCCccCCcCCccCCCchhHHHHHHHhc
Q psy13090        681 HLSSNLFRCEKCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       681 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~  710 (771)
                      |++++||+|++|++.|.+...|..|+++|+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            445555555555555555555555555554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=8.2e-07  Score=57.64  Aligned_cols=30  Identities=27%  Similarity=0.558  Sum_probs=18.0

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +++||.|++|++.|.....|..|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            355666666666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.20  E-value=4.3e-07  Score=55.62  Aligned_cols=29  Identities=31%  Similarity=0.470  Sum_probs=22.0

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57777777777777777777777777764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=8.9e-07  Score=57.43  Aligned_cols=30  Identities=20%  Similarity=0.408  Sum_probs=16.1

Q ss_pred             hcCCCCccCCcCCccCCCchhHHHHHHHhc
Q psy13090        681 HLSSNLFRCEKCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       681 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~  710 (771)
                      |++++||.|++|++.|.+...|..|+++|+
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            444555555555555555555555555554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.19  E-value=6.3e-07  Score=54.80  Aligned_cols=29  Identities=28%  Similarity=0.511  Sum_probs=22.7

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +||.|++|+++|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47888888888888888888888887764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.19  E-value=6e-07  Score=56.46  Aligned_cols=30  Identities=13%  Similarity=0.304  Sum_probs=23.4

Q ss_pred             CCccccc--ccccchhhhhhHHHHHHhhcCCC
Q psy13090         31 KDKFMCY--ACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        31 ~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      ++||.|+  .|+++|...+.|..|+++|+|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4678887  78888888888888888887764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=1.3e-06  Score=53.86  Aligned_cols=28  Identities=18%  Similarity=0.393  Sum_probs=19.6

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +||.|++||+.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777777777777777777777665

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.15  E-value=7.8e-07  Score=55.45  Aligned_cols=29  Identities=38%  Similarity=0.545  Sum_probs=23.8

Q ss_pred             Cccccc--ccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCY--ACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~--~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +||.|+  .|+++|...+.|..|+++|+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            578887  88888888888888888888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.44  E-value=2.8e-07  Score=56.52  Aligned_cols=28  Identities=21%  Similarity=0.417  Sum_probs=17.9

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      +||+|++|+++|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4566666666666666666666666654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=6.9e-07  Score=54.58  Aligned_cols=29  Identities=31%  Similarity=0.528  Sum_probs=20.1

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46777777777777777777777776653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.14  E-value=1.3e-06  Score=53.33  Aligned_cols=28  Identities=25%  Similarity=0.570  Sum_probs=18.8

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +||.|++||+.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566777777777777777776666665

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=2.9e-07  Score=56.93  Aligned_cols=29  Identities=21%  Similarity=0.471  Sum_probs=18.6

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      ++||.|+.|+++|...+.|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            35666666666666666666666666654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=8.1e-07  Score=54.25  Aligned_cols=29  Identities=21%  Similarity=0.329  Sum_probs=20.5

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +||.|++|+++|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46777777777777777777777777653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.13  E-value=8.5e-07  Score=54.67  Aligned_cols=30  Identities=27%  Similarity=0.534  Sum_probs=23.6

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSKP   61 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   61 (771)
                      +||.|++|+++|...+.|..|+++|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            578888888888888888888888877654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=7.4e-07  Score=53.99  Aligned_cols=28  Identities=25%  Similarity=0.479  Sum_probs=18.3

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcC
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      ++||.|++|+++|...+.|..|+++|+|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4566666666666666666666666653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=8.2e-07  Score=53.27  Aligned_cols=26  Identities=27%  Similarity=0.471  Sum_probs=14.9

Q ss_pred             CCcccccccccchhhhhhHHHHHHhh
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTH   56 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H   56 (771)
                      |+||.|++|+++|...+.|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35555555555555555555555555

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=6.1e-07  Score=53.88  Aligned_cols=27  Identities=19%  Similarity=0.370  Sum_probs=16.0

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhc
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHT   57 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~   57 (771)
                      ++||.|++|+++|...+.|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            356666666666666666666665553

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.09  E-value=1.7e-06  Score=52.74  Aligned_cols=27  Identities=26%  Similarity=0.605  Sum_probs=14.6

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ||.|++|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=2.4e-06  Score=53.59  Aligned_cols=28  Identities=21%  Similarity=0.482  Sum_probs=17.5

Q ss_pred             Ceeecc--cCCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCT--QCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +||.|+  .||+.|.+...|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456666  5666666666666666666654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=2.1e-06  Score=51.86  Aligned_cols=26  Identities=31%  Similarity=0.566  Sum_probs=16.1

Q ss_pred             CeeecccCCcccCChhHHHHHHhhcc
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHA  739 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~  739 (771)
                      +||.|++|++.|.+...|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666666654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=2e-06  Score=52.45  Aligned_cols=27  Identities=22%  Similarity=0.550  Sum_probs=17.9

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ||.|++|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566666666666666666666666665

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.05  E-value=2.2e-06  Score=52.72  Aligned_cols=28  Identities=29%  Similarity=0.621  Sum_probs=14.9

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCCC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      ||.|++||+.|.+.+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4555555555555555555555555443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.9e-06  Score=51.65  Aligned_cols=25  Identities=20%  Similarity=0.445  Sum_probs=15.8

Q ss_pred             CeeecccCCcccCChhHHHHHHhhc
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      +||+|++||+.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666666655

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=2.5e-06  Score=51.05  Aligned_cols=25  Identities=24%  Similarity=0.526  Sum_probs=13.2

Q ss_pred             CeeecccCCcccCChhHHHHHHhhc
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      +||.|++||+.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4455555555555555555555544

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.03  E-value=2.6e-06  Score=53.01  Aligned_cols=27  Identities=37%  Similarity=0.663  Sum_probs=17.4

Q ss_pred             eeecc--cCCcccCChhHHHHHHhhccCC
Q psy13090        715 TFMCT--QCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       715 ~~~C~--~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ||.|+  .||+.|.+.+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56665  6666666666666666666655

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.26  E-value=7.7e-07  Score=54.44  Aligned_cols=27  Identities=22%  Similarity=0.411  Sum_probs=16.1

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ||+|++||+.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            556666666666666666666665554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=1.6e-06  Score=53.40  Aligned_cols=29  Identities=17%  Similarity=0.306  Sum_probs=22.2

Q ss_pred             CcccccccccchhhhhhHHHH-HHhhcCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNH-IMTHTGSK   60 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H-~~~H~~~~   60 (771)
                      +||.|+.|+++|...+.|..| +++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            477888888888888888888 67777764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.00  E-value=2.5e-06  Score=51.94  Aligned_cols=27  Identities=22%  Similarity=0.506  Sum_probs=13.2

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ||.|+.|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            444555555555555555554444443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.00  E-value=2e-06  Score=51.44  Aligned_cols=26  Identities=19%  Similarity=0.333  Sum_probs=17.0

Q ss_pred             cccccccccchhhhhhHHHHHHhhcC
Q psy13090         33 KFMCYACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      ||.|++|+++|...+.|..|+++|+|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            56666666666666666666666665

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.99  E-value=3.1e-06  Score=50.59  Aligned_cols=26  Identities=27%  Similarity=0.540  Sum_probs=15.3

Q ss_pred             eeecccCCcccCChhHHHHHHhhccC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHAD  740 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~  740 (771)
                      ||+|++||+.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35566666666666666666666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=8.9e-07  Score=54.62  Aligned_cols=28  Identities=21%  Similarity=0.605  Sum_probs=16.5

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +||.|++||+.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4556666666666666666666655554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.16  E-value=1.3e-06  Score=51.79  Aligned_cols=25  Identities=28%  Similarity=0.526  Sum_probs=13.3

Q ss_pred             CcccccccccchhhhhhHHHHHHhh
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTH   56 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H   56 (771)
                      |||.|++|+++|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3555555555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.90  E-value=4.9e-06  Score=51.14  Aligned_cols=27  Identities=22%  Similarity=0.570  Sum_probs=17.3

Q ss_pred             eeecccCCcccCChhHHHHH-HhhccCC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTH-AMVHADE  741 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H-~~~H~~e  741 (771)
                      ||.|+.||+.|.+.+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4566655

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.90  E-value=9.3e-06  Score=60.37  Aligned_cols=29  Identities=14%  Similarity=0.441  Sum_probs=14.8

Q ss_pred             cCCCCccCCcCCccCCCchhHHHHHHHhc
Q psy13090        682 LSSNLFRCEKCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       682 ~~~~~~~C~~C~~~F~~~~~L~~H~~~H~  710 (771)
                      .+++||+|++|++.|.++..|..|+++|+
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            34455555555555555555555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.11  E-value=1.7e-06  Score=51.30  Aligned_cols=26  Identities=31%  Similarity=0.545  Sum_probs=24.2

Q ss_pred             CCccCCCCcccchhhHHHhhhhhHhH
Q psy13090         60 KPYNCSHCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (771)
                      +||+|++|++.|.+++.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999998874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.69  E-value=1.2e-05  Score=48.83  Aligned_cols=27  Identities=26%  Similarity=0.406  Sum_probs=17.0

Q ss_pred             Cccccc--ccccchhhhhhHHHHHHhhcC
Q psy13090         32 DKFMCY--ACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        32 k~~~C~--~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      +||.|+  .|+++|...+.|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            356666  666666666666666666653

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.61  E-value=3.1e-05  Score=46.88  Aligned_cols=26  Identities=23%  Similarity=0.657  Sum_probs=16.5

Q ss_pred             eeecc--cCCcccCChhHHHHHHhhccC
Q psy13090        715 TFMCT--QCDFTSSSKDTLNTHAMVHAD  740 (771)
Q Consensus       715 ~~~C~--~C~~~f~~~~~L~~H~~~H~~  740 (771)
                      ||.|+  .|++.|.+.+.|..|+++|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            56666  666666666666666666653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.39  E-value=0.00018  Score=53.15  Aligned_cols=47  Identities=26%  Similarity=0.418  Sum_probs=26.3

Q ss_pred             CCcccCChhHHHHHH-hhccCCC------ccccC--CCCCccchhhhhhhHHHHHh
Q psy13090        721 CDFTSSSKDTLNTHA-MVHADEL------KFSCQ--NCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       721 C~~~f~~~~~L~~H~-~~H~~e~------~~~C~--~C~~~f~~~~~l~~H~~~~H  767 (771)
                      |++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|.+||+..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            555555555555554 2454433      56664  66666666666666666544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.95  E-value=0.00014  Score=62.43  Aligned_cols=32  Identities=9%  Similarity=0.194  Sum_probs=22.4

Q ss_pred             hccCCCccccCCCCCccchhhhhhhHHH-HHhh
Q psy13090        737 VHADELKFSCQNCDFKCSKLSCVRNVIS-QVAQ  768 (771)
Q Consensus       737 ~H~~e~~~~C~~C~~~f~~~~~l~~H~~-~~H~  768 (771)
                      .+.+...|-|.+|++.|.+...|..|+. ..|+
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~gk~H~  119 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYIGKTHI  119 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHTSHHHH
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHCCHHHH
Confidence            3556667778888888888888888865 3443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.87  E-value=0.00093  Score=49.28  Aligned_cols=47  Identities=19%  Similarity=0.455  Sum_probs=27.3

Q ss_pred             chhhccCHHHHHHHHhhccCCCC------CcccC--cchhhcCCHHHHHHHHHhh
Q psy13090        453 CSQLFRRASAVEKHIALKHTGDK------PYSCY--LCEEKFENSESLRTHMNSL  499 (771)
Q Consensus       453 C~~~f~~~~~L~~H~~~~H~~~~------~~~C~--~C~~~f~~~~~L~~H~~~~  499 (771)
                      |++.|.+...|..|+...|.+.+      +|.|.  .|+..+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            55566666666666544454443      56664  5666666666666666543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.21  E-value=0.0013  Score=54.92  Aligned_cols=35  Identities=20%  Similarity=0.131  Sum_probs=29.0

Q ss_pred             HHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHH
Q psy13090         52 HIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDML   86 (771)
Q Consensus        52 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   86 (771)
                      +...|+|++||.|.+|++.|.+.++|..|+++..-
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~H   75 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDH   75 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCHHH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhhhh
Confidence            44568899999999999999999999999876543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.13  E-value=0.0008  Score=57.62  Aligned_cols=27  Identities=26%  Similarity=0.491  Sum_probs=20.8

Q ss_pred             CccccccchhhccChHHHHHHH--hhccC
Q psy13090        629 SQLTCDICDRVFQTDKQWKLHM--GFHNT  655 (771)
Q Consensus       629 ~~~~C~~C~~~f~~~~~L~~H~--~~H~~  655 (771)
                      +++.|.+|+..|.+...+..|.  +.|..
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~   59 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHAN   59 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHH
Confidence            4578888888888888888887  45543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.13  E-value=0.00085  Score=55.94  Aligned_cols=33  Identities=27%  Similarity=0.313  Sum_probs=29.9

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhh
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTH   56 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H   56 (771)
                      .-..|||++||.|..|++.|.+.+.|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            456899999999999999999999999998744

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.38  E-value=0.0094  Score=54.27  Aligned_cols=104  Identities=15%  Similarity=0.328  Sum_probs=70.5

Q ss_pred             ccccchhhccChH-----HHHHHHhhccCCCcccc--ccccccccChhHHHHHHHHhcCCCCccCCcCCccCCCchhHHH
Q psy13090        632 TCDICDRVFQTDK-----QWKLHMGFHNTKRRLPC--KLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEY  704 (771)
Q Consensus       632 ~C~~C~~~f~~~~-----~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~  704 (771)
                      .|+.|...+....     .+..-+    ......|  .-|+..+. ...|..|... =.-++..|+.|+..+ .+..|..
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~  127 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREI----LSLMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINI  127 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHH----HTSEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHH----hhcccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHH
Confidence            6888877765431     122222    2345677  46877664 5677888642 234678899999988 6778999


Q ss_pred             HHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCcc
Q psy13090        705 HMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKF  744 (771)
Q Consensus       705 H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~  744 (771)
                      |+...- ..++-.|+.|+..+. ...|..|..+++|+.++
T Consensus       128 H~~~~C-~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          128 HILKDC-PRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHHTC-TTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             HhhhhC-CCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            987666 478889999998874 56789999999998775

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.40  E-value=0.081  Score=47.97  Aligned_cols=128  Identities=19%  Similarity=0.257  Sum_probs=84.5

Q ss_pred             CCccccccchhhccChHH-----------HHHHHhhccCCCccccccccccccChhHHH-HHHHHhcCCCCccC--CcCC
Q psy13090        628 ESQLTCDICDRVFQTDKQ-----------WKLHMGFHNTKRRLPCKLCGFRLKNHKQLK-LHQRYHLSSNLFRC--EKCN  693 (771)
Q Consensus       628 ~~~~~C~~C~~~f~~~~~-----------L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~-~H~~~H~~~~~~~C--~~C~  693 (771)
                      +..+.|++|...|.....           +...+..    ....|+.|...+.....+. .-+..-..+-...|  ..|+
T Consensus        16 ~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~   91 (170)
T 3hcs_A           16 ESKYECPICLMALREAVQTPCGHRFCKACIIKSIRD----AGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCL   91 (170)
T ss_dssp             CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH----HCSBCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCC
T ss_pred             CCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHh----CCCCCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCC
Confidence            445788888777765422           2222221    1238999988876532100 00111122456778  5688


Q ss_pred             ccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCccchhhhhhhHHH
Q psy13090        694 LGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFKCSKLSCVRNVIS  764 (771)
Q Consensus       694 ~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~f~~~~~l~~H~~  764 (771)
                      .... ...|..|+..=  .-++..|+.|+..+ .+..|..|+...-..++-.|+.|+..+. ...|..|..
T Consensus        92 ~~~~-~~~l~~H~~~C--~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~  157 (170)
T 3hcs_A           92 HKME-LRHLEDHQAHC--EFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQ  157 (170)
T ss_dssp             CEEE-GGGHHHHHTTC--TTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHT
T ss_pred             ceec-HhHHHHHHhcC--CceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHH
Confidence            7765 56788887532  35788999999988 6788999998888889999999999886 455777753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.14  E-value=0.028  Score=36.90  Aligned_cols=23  Identities=17%  Similarity=0.429  Sum_probs=16.4

Q ss_pred             CeeecccCCcccCChhHHHHHHh
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAM  736 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~  736 (771)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45677777777777777777766

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.69  E-value=0.039  Score=36.23  Aligned_cols=25  Identities=20%  Similarity=0.416  Sum_probs=17.8

Q ss_pred             CCccCCcCCccCCCchhHHHHHHHh
Q psy13090        685 NLFRCEKCNLGYSRKDSFEYHMTSH  709 (771)
Q Consensus       685 ~~~~C~~C~~~F~~~~~L~~H~~~H  709 (771)
                      .+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            4577777777777777777777643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.79  E-value=0.27  Score=30.25  Aligned_cols=25  Identities=20%  Similarity=0.577  Sum_probs=13.8

Q ss_pred             cccCcchhhcCCHHHHHHHHHhhhc
Q psy13090        477 YSCYLCEEKFENSESLRTHMNSLHA  501 (771)
Q Consensus       477 ~~C~~C~~~f~~~~~L~~H~~~~H~  501 (771)
                      |.|++|-+.|.+...|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            5555555555555555555554444

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.73  E-value=0.24  Score=30.47  Aligned_cols=24  Identities=17%  Similarity=0.239  Sum_probs=14.4

Q ss_pred             cccCCCCCccchhhhhhhHHHHHh
Q psy13090        744 FSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       744 ~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      |.|++|.+.|.+...|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            556666666666666666655555

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.81  E-value=0.45  Score=28.01  Aligned_cols=24  Identities=21%  Similarity=0.328  Sum_probs=20.1

Q ss_pred             cccCCCCCccchhhhhhhHHHHHh
Q psy13090        744 FSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       744 ~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      -.|.+|.++++.-.+|..|++..|
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            458888888888888888888776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	771
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSC 479
            C+ C + F R   +  HI   HT ++P+ C
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 472 TGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
           +  KPY C  C + F   + L  H+  +H    P+ C +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLH 500
           H+G+KPY CY+C  +F  S +++ H+   H
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKH 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	771
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.59
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.41
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.41
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.39
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.33
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.28
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.26
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.25
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.21
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.2
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.12
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.11
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.09
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.0
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.98
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.85
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.85
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.84
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.82
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.69
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.6
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.59
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.5
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.39
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.26
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.26
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.24
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.22
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.17
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.17
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.08
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.97
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.84
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.83
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.71
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.68
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.67
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.62
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.62
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.61
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.5
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.34
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.33
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.32
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.25
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.23
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.22
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.17
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.12
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.08
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.0
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.0
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.99
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.96
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.96
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.92
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.88
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.85
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.76
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.72
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.44
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.4
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.4
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.38
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.01
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.91
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.87
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.79
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.77
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.43
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.27
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.86
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.73
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.56
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.68
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.5
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.37
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.23
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.87
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.46
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.87
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.29
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.45
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	89.88
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	88.28
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.76
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	87.04
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.61
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.56
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	85.16
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.0
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.94
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	84.51
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	84.39
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	84.16
d1y0jb1	36	U-shaped transcription factor, different fingers {	83.75
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	83.4
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.71
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.56
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.24

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.2e-17  Score=118.25  Aligned_cols=53  Identities=26%  Similarity=0.480  Sum_probs=51.5

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcccchhhHHHhhhhhHh
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVD   84 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h   84 (771)
                      ||||.| +||++|...++|..|+++|+|++||+|++|+++|.+++.|..||++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            799999 59999999999999999999999999999999999999999999887

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.5e-16  Score=110.53  Aligned_cols=53  Identities=25%  Similarity=0.533  Sum_probs=27.1

Q ss_pred             CCCccCCcCCccCCCchhHHHHHHHhcCCCCeeecccCCcccCChhHHHHHHhhc
Q psy13090        684 SNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       684 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      |+||+|+ ||++|..+.+|..|+++|+ +++||.|++||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht-~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL-GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS-CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc-cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3455552 5555555555555555554 345555555555555555555555544

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.3e-14  Score=90.65  Aligned_cols=37  Identities=24%  Similarity=0.387  Sum_probs=34.9

Q ss_pred             cccccCCCCCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         23 AMPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        23 ~h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      .|+++|++||||.|++||++|...++|.+|+++||||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5899999999999999999999999999999999997

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.6e-14  Score=89.94  Aligned_cols=38  Identities=21%  Similarity=0.500  Sum_probs=35.4

Q ss_pred             CCCCcccccccccchhhhhhHHHHHH-hhcCCCCccCCC
Q psy13090         29 PHKDKFMCYACYYSTYISTNMKNHIM-THTGSKPYNCSH   66 (771)
Q Consensus        29 ~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~~~C~~   66 (771)
                      +-+|||+|++||++|+.+++|++|++ +|+|||||+|++
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            35899999999999999999999986 899999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=5.4e-14  Score=85.33  Aligned_cols=33  Identities=27%  Similarity=0.430  Sum_probs=29.3

Q ss_pred             cCCCCCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        27 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      ||||||||+|.+||++|...++|..|+++||||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            688999999999999999999999999999886

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=2.3e-13  Score=85.95  Aligned_cols=35  Identities=23%  Similarity=0.170  Sum_probs=30.6

Q ss_pred             ccccCCCCCcccccccccchhhhhhHHHHHHhhcC
Q psy13090         24 MPRIHPHKDKFMCYACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        24 h~r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      |.|+|||||||+|++|+++|+.+++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            77889999999999999999988999999888875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.6e-13  Score=85.03  Aligned_cols=34  Identities=15%  Similarity=0.265  Sum_probs=30.9

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      |+|||||||.|++||++|..+++|+.|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            7899999999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=9.7e-13  Score=83.28  Aligned_cols=37  Identities=32%  Similarity=0.563  Sum_probs=30.9

Q ss_pred             CCCeeecccCCcccCChhHHHHHHh-hccCCCccccCC
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAM-VHADELKFSCQN  748 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~e~~~~C~~  748 (771)
                      .++||+|++||++|.+.+.|.+|++ +|+||+||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3688888888888888888888875 788888888874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.3e-13  Score=87.87  Aligned_cols=37  Identities=16%  Similarity=0.256  Sum_probs=35.1

Q ss_pred             HHHHhhcCCCCccCCCCcccchhhHHHhhhhhHhHHH
Q psy13090         51 NHIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDMLQ   87 (771)
Q Consensus        51 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (771)
                      +|+++|+++|||+|++|+++|.++++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5899999999999999999999999999999999874

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=4.6e-13  Score=81.17  Aligned_cols=33  Identities=33%  Similarity=0.549  Sum_probs=31.5

Q ss_pred             hhcCCCCccCCCCcccchhhHHHhhhhhHhHHH
Q psy13090         55 THTGSKPYNCSHCTFKGASSQALKYHMHVDMLQ   87 (771)
Q Consensus        55 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   87 (771)
                      +|||+|||+|++|+++|.++++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999874

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2e-12  Score=80.66  Aligned_cols=33  Identities=30%  Similarity=0.522  Sum_probs=27.1

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcC
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      |+|||||||+|++|+++|+.+++|++|++.+.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            688899999999999999988999999755443

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.4e-12  Score=82.26  Aligned_cols=34  Identities=29%  Similarity=0.491  Sum_probs=32.6

Q ss_pred             HHHhhcCCCCccCCCCcccchhhHHHhhhhhHhH
Q psy13090         52 HIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        52 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (771)
                      |+|+|||||||+|++|+++|+++++|+.|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            7899999999999999999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=2.2e-12  Score=79.29  Aligned_cols=32  Identities=25%  Similarity=0.476  Sum_probs=26.0

Q ss_pred             CCCCCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         28 HPHKDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        28 H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      |||||||+|++|+++|+.+++|++|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67888888888888888888888888888765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=2.5e-12  Score=80.46  Aligned_cols=33  Identities=42%  Similarity=0.615  Sum_probs=31.3

Q ss_pred             HhhcCCCCccCCCCcccchhhHHHhhhhhHhHH
Q psy13090         54 MTHTGSKPYNCSHCTFKGASSQALKYHMHVDML   86 (771)
Q Consensus        54 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   86 (771)
                      |+|||||||+|++|+++|.++++|+.|+++|++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            689999999999999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.13  E-value=7.4e-12  Score=73.55  Aligned_cols=29  Identities=28%  Similarity=0.511  Sum_probs=25.8

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      |||+|++|+++|+.+++|++|+++|||||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999886

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=6.4e-12  Score=72.69  Aligned_cols=28  Identities=36%  Similarity=0.630  Sum_probs=19.9

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcC
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      ||||+|++|+++|+.+++|++|+++|||
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5677777777777777777777777765

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.11  E-value=6e-12  Score=83.80  Aligned_cols=39  Identities=21%  Similarity=0.278  Sum_probs=31.4

Q ss_pred             hhcccccCCCCCcccccc--cccchhhhhhHHHHHHhhcCCC
Q psy13090         21 CVAMPRIHPHKDKFMCYA--CYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        21 ~~~h~r~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      |..|+ .|+||+||+|++  |+++|+.+++|+.|+++|||||
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44555 488888888877  8888888888888888888875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=1.1e-11  Score=76.07  Aligned_cols=31  Identities=19%  Similarity=0.417  Sum_probs=29.7

Q ss_pred             hcCCCCccCCCCcccchhhHHHhhhhhHhHH
Q psy13090         56 HTGSKPYNCSHCTFKGASSQALKYHMHVDML   86 (771)
Q Consensus        56 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   86 (771)
                      |||||||+|++|++.|.++++|+.|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            8999999999999999999999999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.7e-11  Score=71.72  Aligned_cols=29  Identities=34%  Similarity=0.548  Sum_probs=25.6

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      |||.|++|+++|..+++|.+|+++|||||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68899999999999999999999999885

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.1e-11  Score=75.65  Aligned_cols=33  Identities=27%  Similarity=0.614  Sum_probs=31.2

Q ss_pred             ccccc--cccchhhhhhHHHHHHhhcCCCCccCCC
Q psy13090         34 FMCYA--CYYSTYISTNMKNHIMTHTGSKPYNCSH   66 (771)
Q Consensus        34 ~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~   66 (771)
                      |.|++  |+++|.++++|++|+++|+|+|||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78987  9999999999999999999999999974

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=3.2e-11  Score=75.15  Aligned_cols=32  Identities=19%  Similarity=0.347  Sum_probs=20.3

Q ss_pred             hhccCCCccccCCCCCccchhhhhhhHHHHHh
Q psy13090        736 MVHADELKFSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       736 ~~H~~e~~~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      |+|+||+||+|++||++|+++++|++|++.+|
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            35666666666666666666666666666555

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=3.4e-11  Score=69.59  Aligned_cols=28  Identities=25%  Similarity=0.466  Sum_probs=27.0

Q ss_pred             CCCccCCCCcccchhhHHHhhhhhHhHH
Q psy13090         59 SKPYNCSHCTFKGASSQALKYHMHVDML   86 (771)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~   86 (771)
                      ||||+|++|+++|+++++|+.|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999999985

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.00  E-value=8.1e-11  Score=69.03  Aligned_cols=29  Identities=24%  Similarity=0.557  Sum_probs=20.6

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCCC
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      +||+|++||++|.+++.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=9.5e-12  Score=82.84  Aligned_cols=42  Identities=12%  Similarity=0.286  Sum_probs=37.6

Q ss_pred             hhhHHHHHHhhcCCCCccCCC--CcccchhhHHHhhhhhHhHHHH
Q psy13090         46 STNMKNHIMTHTGSKPYNCSH--CTFKGASSQALKYHMHVDMLQY   88 (771)
Q Consensus        46 ~~~l~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~   88 (771)
                      ++.|.+|++ |+|++||+|++  |+++|+.+++|+.|+++|+|++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456778885 99999999988  9999999999999999999864

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.8e-10  Score=67.36  Aligned_cols=29  Identities=24%  Similarity=0.512  Sum_probs=19.0

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCCC
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      +||.|++||++|.+++.|.+|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46666666666666666666666666664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2e-10  Score=71.21  Aligned_cols=33  Identities=27%  Similarity=0.619  Sum_probs=26.8

Q ss_pred             eeccc--CCcccCChhHHHHHHhhccCCCccccCC
Q psy13090        716 FMCTQ--CDFTSSSKDTLNTHAMVHADELKFSCQN  748 (771)
Q Consensus       716 ~~C~~--C~~~f~~~~~L~~H~~~H~~e~~~~C~~  748 (771)
                      |.|+.  ||++|.++..|++|+++|+||+||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67876  8888888888888888888888888863

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=2.2e-10  Score=64.18  Aligned_cols=26  Identities=23%  Similarity=0.427  Sum_probs=13.4

Q ss_pred             CcccccccccchhhhhhHHHHHHhhc
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHT   57 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~   57 (771)
                      |||+|.+||++|..+++|..|+++||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            45555555555555555555555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.4e-10  Score=66.05  Aligned_cols=28  Identities=32%  Similarity=0.492  Sum_probs=22.9

Q ss_pred             Ccccccc--cccchhhhhhHHHHHHhhcCC
Q psy13090         32 DKFMCYA--CYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        32 k~~~C~~--C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      |||.|++  |+++|+.+++|++|+++||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6888877  888888888888888888876

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.8e-10  Score=62.74  Aligned_cols=26  Identities=27%  Similarity=0.547  Sum_probs=25.2

Q ss_pred             CCccCCCCcccchhhHHHhhhhhHhH
Q psy13090         60 KPYNCSHCTFKGASSQALKYHMHVDM   85 (771)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (771)
                      |||+|++||++|++++.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=3.8e-10  Score=66.50  Aligned_cols=28  Identities=29%  Similarity=0.567  Sum_probs=21.5

Q ss_pred             Ccccccc--cccchhhhhhHHHHHHhhcCC
Q psy13090         32 DKFMCYA--CYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        32 k~~~C~~--C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      |||.|++  |+++|+.+++|++|+++||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5777766  777777777777777777775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=5.8e-10  Score=66.36  Aligned_cols=29  Identities=38%  Similarity=0.545  Sum_probs=25.6

Q ss_pred             Cccccc--ccccchhhhhhHHHHHHhhcCCC
Q psy13090         32 DKFMCY--ACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        32 k~~~C~--~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      |||.|+  .|+++|+.+++|++|+++|||||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689995  59999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.9e-09  Score=61.94  Aligned_cols=28  Identities=32%  Similarity=0.498  Sum_probs=16.9

Q ss_pred             Ceeeccc--CCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCTQ--CDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      |||+|++  ||++|.+.+.|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3566655  666666666666666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.8e-09  Score=62.15  Aligned_cols=28  Identities=32%  Similarity=0.532  Sum_probs=18.7

Q ss_pred             Ceeeccc--CCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCTQ--CDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      |||+|++  ||++|.+.+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4666665  666666666666666666665

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=7.7e-09  Score=61.43  Aligned_cols=29  Identities=34%  Similarity=0.611  Sum_probs=19.3

Q ss_pred             Ceeecc--cCCcccCChhHHHHHHhhccCCC
Q psy13090        714 QTFMCT--QCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       714 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      +||.|+  .||++|.+.+.|.+|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466674  37777777777777777777664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=4.7e-09  Score=60.96  Aligned_cols=27  Identities=30%  Similarity=0.534  Sum_probs=17.0

Q ss_pred             Ccccccc--cccchhhhhhHHHHHHhhcC
Q psy13090         32 DKFMCYA--CYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        32 k~~~C~~--C~~~f~~~~~l~~H~~~H~~   58 (771)
                      |||+|++  |+++|+++++|++|+++|||
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666655  66666666666666666664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.59  E-value=8.3e-09  Score=61.52  Aligned_cols=28  Identities=14%  Similarity=0.313  Sum_probs=21.5

Q ss_pred             CCcccccc--cccchhhhhhHHHHHHhhcC
Q psy13090         31 KDKFMCYA--CYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        31 ~k~~~C~~--C~~~f~~~~~l~~H~~~H~~   58 (771)
                      ||||.|++  |+++|+++++|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57777776  77777777777777777775

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.2e-08  Score=58.34  Aligned_cols=26  Identities=38%  Similarity=0.654  Sum_probs=18.8

Q ss_pred             Ccccccc--cccchhhhhhHHHHHHhhc
Q psy13090         32 DKFMCYA--CYYSTYISTNMKNHIMTHT   57 (771)
Q Consensus        32 k~~~C~~--C~~~f~~~~~l~~H~~~H~   57 (771)
                      |||.|++  |+++|+++++|++|+++||
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5777766  7777777777777777775

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=2e-08  Score=58.23  Aligned_cols=27  Identities=26%  Similarity=0.568  Sum_probs=25.8

Q ss_pred             CCccCCC--CcccchhhHHHhhhhhHhHH
Q psy13090         60 KPYNCSH--CTFKGASSQALKYHMHVDML   86 (771)
Q Consensus        60 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~   86 (771)
                      |||+|++  |+++|.++++|+.|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999999  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.39  E-value=9.1e-08  Score=56.94  Aligned_cols=26  Identities=23%  Similarity=0.659  Sum_probs=12.2

Q ss_pred             CCccCCc--CCccCCCchhHHHHHHHhc
Q psy13090        685 NLFRCEK--CNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       685 ~~~~C~~--C~~~F~~~~~L~~H~~~H~  710 (771)
                      +||.|++  |+++|++.++|.+|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4444444  4444444444444444444

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.3e-07  Score=48.52  Aligned_cols=24  Identities=38%  Similarity=0.569  Sum_probs=11.5

Q ss_pred             eecccCCcccCChhHHHHHHhhcc
Q psy13090        716 FMCTQCDFTSSSKDTLNTHAMVHA  739 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~~~H~  739 (771)
                      .+|++|++.|+.+..|..||+.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            344444444444444444444444

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.4e-07  Score=49.35  Aligned_cols=26  Identities=27%  Similarity=0.444  Sum_probs=17.3

Q ss_pred             cccccccccchhhhhhHHHHHHhhcC
Q psy13090         33 KFMCYACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      |..|+.|++.|+++..|+.|||.|||
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45666666666666666666666665

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=2.2e-07  Score=53.04  Aligned_cols=24  Identities=21%  Similarity=0.629  Sum_probs=11.6

Q ss_pred             CccCCc--CCccCCCchhHHHHHHHh
Q psy13090        686 LFRCEK--CNLGYSRKDSFEYHMTSH  709 (771)
Q Consensus       686 ~~~C~~--C~~~F~~~~~L~~H~~~H  709 (771)
                      ||.|+.  ||++|++.++|+.|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            444444  444444444444444444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=2.1e-07  Score=50.61  Aligned_cols=27  Identities=26%  Similarity=0.338  Sum_probs=18.2

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhc
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHT   57 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~   57 (771)
                      ||||.|.+||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            566777777777766666666666663

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.8e-07  Score=50.75  Aligned_cols=29  Identities=24%  Similarity=0.472  Sum_probs=25.9

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      ||||+|++|...|.++..+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999873

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=2.9e-07  Score=49.48  Aligned_cols=29  Identities=31%  Similarity=0.671  Sum_probs=22.3

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcCC
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      |+||+|..|+++-..++.|..|++.|||+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57788888887777777788888777774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=2.8e-07  Score=52.08  Aligned_cols=32  Identities=25%  Similarity=0.515  Sum_probs=29.6

Q ss_pred             CcccccccccchhhhhhHHHHHHhhcCCCCcc
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHTGSKPYN   63 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   63 (771)
                      |...|..||+.|....+|.+|...|+|||||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            56689999999999999999999999999984

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=5.7e-07  Score=48.88  Aligned_cols=27  Identities=26%  Similarity=0.543  Sum_probs=18.6

Q ss_pred             CCeeecccCCcccCChhHHHHHHhhcc
Q psy13090        713 EQTFMCTQCDFTSSSKDTLNTHAMVHA  739 (771)
Q Consensus       713 ~~~~~C~~C~~~f~~~~~L~~H~~~H~  739 (771)
                      |+||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            466777777777777777777776663

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=9.8e-07  Score=49.82  Aligned_cols=32  Identities=25%  Similarity=0.430  Sum_probs=26.9

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCCCccc
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADELKFS  745 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~  745 (771)
                      +...|++||+.|.....|.+|...|+||+||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45678889999988888889988899988884

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.2e-06  Score=47.02  Aligned_cols=29  Identities=28%  Similarity=0.649  Sum_probs=20.6

Q ss_pred             CCeeecccCCcccCChhHHHHHHhhccCC
Q psy13090        713 EQTFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       713 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ++||+|.+|.+.....+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46777777777777777777777777763

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.6e-06  Score=47.73  Aligned_cols=28  Identities=36%  Similarity=0.854  Sum_probs=16.2

Q ss_pred             CCCccCCcCCccCCCchhHHHHHHHhcC
Q psy13090        684 SNLFRCEKCNLGYSRKDSFEYHMTSHNQ  711 (771)
Q Consensus       684 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~  711 (771)
                      |+||.|++|+..|.++..+..|+++|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3555666666666666666666665553

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.3e-06  Score=46.68  Aligned_cols=26  Identities=31%  Similarity=0.568  Sum_probs=22.9

Q ss_pred             ccccccccchhhhhhHHHHHHhhcCC
Q psy13090         34 FMCYACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      ..|.+||++|..++.|++|..+||||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            47899999999999999999999886

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.6e-06  Score=44.22  Aligned_cols=27  Identities=26%  Similarity=0.596  Sum_probs=22.0

Q ss_pred             eeecccCCcccCChhHHHHHHhhccCC
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ...|..||+.|...+.|++|..+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            356888888888888888888888875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4e-06  Score=45.40  Aligned_cols=28  Identities=32%  Similarity=0.598  Sum_probs=23.6

Q ss_pred             cccccccccchhhhhhHHHHHHhhcCCC
Q psy13090         33 KFMCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      .|.|++|+......+.|+.|++.||+++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            4788888888888888888888888875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.1e-05  Score=43.63  Aligned_cols=27  Identities=22%  Similarity=0.609  Sum_probs=16.6

Q ss_pred             eecccCCcccCChhHHHHHHhhccCCC
Q psy13090        716 FMCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      |.|++||.....++.|+.|++.|++|+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            556666666666666666666666653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=6.9e-06  Score=45.37  Aligned_cols=26  Identities=19%  Similarity=0.448  Sum_probs=19.2

Q ss_pred             CccccCC--CCCccchhhhhhhHHHHHh
Q psy13090        742 LKFSCQN--CDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       742 ~~~~C~~--C~~~f~~~~~l~~H~~~~H  767 (771)
                      +||.|.+  |+|+++..++|+.|++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4777755  7777777777777777766

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=9e-06  Score=42.71  Aligned_cols=26  Identities=31%  Similarity=0.399  Sum_probs=22.6

Q ss_pred             cccccccchhhhhhHHHHHHhhcCCC
Q psy13090         35 MCYACYYSTYISTNMKNHIMTHTGSK   60 (771)
Q Consensus        35 ~C~~C~~~f~~~~~l~~H~~~H~~~~   60 (771)
                      +||.|.++|.++.-|+.|-+.||||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68889999988888899988888875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1e-05  Score=43.02  Aligned_cols=26  Identities=23%  Similarity=0.626  Sum_probs=18.1

Q ss_pred             CcccccccccchhhhhhHHHHHHhhc
Q psy13090         32 DKFMCYACYYSTYISTNMKNHIMTHT   57 (771)
Q Consensus        32 k~~~C~~C~~~f~~~~~l~~H~~~H~   57 (771)
                      |||.|..|+++...+++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56777777777777777777777664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.9e-05  Score=42.01  Aligned_cols=26  Identities=27%  Similarity=0.830  Sum_probs=18.3

Q ss_pred             CeeecccCCcccCChhHHHHHHhhcc
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHA  739 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~  739 (771)
                      +||+|..|++.....++|..|+|+|+
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56777777777777777777777765

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=1.8e-05  Score=41.55  Aligned_cols=26  Identities=31%  Similarity=0.378  Sum_probs=17.6

Q ss_pred             ecccCCcccCChhHHHHHHhhccCCC
Q psy13090        717 MCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       717 ~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      +|+.|.++|.++..|+.|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46667777777777777766676664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.9e-05  Score=42.17  Aligned_cols=28  Identities=25%  Similarity=0.572  Sum_probs=22.0

Q ss_pred             CccccCCCCCccchhhhhhhHHHHHhhh
Q psy13090        742 LKFSCQNCDFKCSKLSCVRNVISQVAQK  769 (771)
Q Consensus       742 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  769 (771)
                      +||.|..|.++....++|+.|+.+.|-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5788888888888888888888877754

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5.4e-05  Score=41.04  Aligned_cols=27  Identities=19%  Similarity=0.453  Sum_probs=23.2

Q ss_pred             CccccCCCCCccchhhhhhhHHHHHhh
Q psy13090        742 LKFSCQNCDFKCSKLSCVRNVISQVAQ  768 (771)
Q Consensus       742 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  768 (771)
                      +||+|.+|.+--.+.|+|..|+.++|-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            588899998888889999999888874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.33  E-value=5.1e-05  Score=40.84  Aligned_cols=24  Identities=38%  Similarity=0.732  Sum_probs=13.7

Q ss_pred             CccCCC--CcccchhhHHHhhhhhHh
Q psy13090         61 PYNCSH--CTFKGASSQALKYHMHVD   84 (771)
Q Consensus        61 ~~~C~~--C~~~f~~~~~L~~H~~~h   84 (771)
                      ||+|+.  |++.|+..+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            555555  555555555555555554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=7.1e-05  Score=41.30  Aligned_cols=25  Identities=20%  Similarity=0.535  Sum_probs=12.4

Q ss_pred             CccCCc--CCccCCCchhHHHHHHHhc
Q psy13090        686 LFRCEK--CNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       686 ~~~C~~--C~~~F~~~~~L~~H~~~H~  710 (771)
                      ||.|.+  |+++++..++|++|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455543  5555555555555555443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.25  E-value=9.9e-05  Score=38.01  Aligned_cols=24  Identities=29%  Similarity=0.605  Sum_probs=15.9

Q ss_pred             eecccCCcccCChhHHHHHHhhcc
Q psy13090        716 FMCTQCDFTSSSKDTLNTHAMVHA  739 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~~~H~  739 (771)
                      |+|.+|..+|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            566666666666666666666663

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=0.00012  Score=39.43  Aligned_cols=27  Identities=30%  Similarity=0.539  Sum_probs=13.5

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccC
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHAD  740 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  740 (771)
                      +.|.|.+|...|..+-.|+.||..|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            344455555555555555555555544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=5.2e-05  Score=40.97  Aligned_cols=23  Identities=35%  Similarity=0.769  Sum_probs=20.2

Q ss_pred             CccCCCCcccchhhHHHhhhhhH
Q psy13090         61 PYNCSHCTFKGASSQALKYHMHV   83 (771)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~   83 (771)
                      ||.|..|+.+|..+++|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999854

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0001  Score=44.14  Aligned_cols=27  Identities=7%  Similarity=0.213  Sum_probs=19.4

Q ss_pred             cCCCccccCCCCCccchhhhhhhHHHH
Q psy13090        739 ADELKFSCQNCDFKCSKLSCVRNVISQ  765 (771)
Q Consensus       739 ~~e~~~~C~~C~~~f~~~~~l~~H~~~  765 (771)
                      +|-+||.|.+|+|+|..+.++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            356777777777777777777777653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.12  E-value=9.1e-05  Score=39.86  Aligned_cols=25  Identities=20%  Similarity=0.369  Sum_probs=23.4

Q ss_pred             Ccccccc--cccchhhhhhHHHHHHhh
Q psy13090         32 DKFMCYA--CYYSTYISTNMKNHIMTH   56 (771)
Q Consensus        32 k~~~C~~--C~~~f~~~~~l~~H~~~H   56 (771)
                      .||.|++  |+++|+..+.|++|-++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5999986  999999999999999987

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00029  Score=38.23  Aligned_cols=23  Identities=13%  Similarity=0.603  Sum_probs=10.0

Q ss_pred             CccCCcCCccCCCchhHHHHHHH
Q psy13090        686 LFRCEKCNLGYSRKDSFEYHMTS  708 (771)
Q Consensus       686 ~~~C~~C~~~F~~~~~L~~H~~~  708 (771)
                      ||.|..|.+.....++|+.|+++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            34444444444444444444443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00013  Score=40.63  Aligned_cols=27  Identities=22%  Similarity=0.548  Sum_probs=15.3

Q ss_pred             Ceeeccc--CCcccCChhHHHHHH-hhccC
Q psy13090        714 QTFMCTQ--CDFTSSSKDTLNTHA-MVHAD  740 (771)
Q Consensus       714 ~~~~C~~--C~~~f~~~~~L~~H~-~~H~~  740 (771)
                      +||.|++  |.|.|++.++-..|+ |+|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            3555655  666666666555664 55554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.00027  Score=38.02  Aligned_cols=26  Identities=31%  Similarity=0.750  Sum_probs=14.1

Q ss_pred             CCccCCcCCccCCCchhHHHHHHHhc
Q psy13090        685 NLFRCEKCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       685 ~~~~C~~C~~~F~~~~~L~~H~~~H~  710 (771)
                      ..|.|..|...|.+.-.|+.||..|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeeccc
Confidence            34555555555555555555555555

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.99  E-value=0.00026  Score=42.43  Aligned_cols=30  Identities=23%  Similarity=0.465  Sum_probs=20.8

Q ss_pred             CCeeecccCCcccCChhHHHHHHhhccCCC
Q psy13090        713 EQTFMCTQCDFTSSSKDTLNTHAMVHADEL  742 (771)
Q Consensus       713 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~  742 (771)
                      .+.|+|.+|++.|.+..+|--||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            355777777777777777777777776543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.96  E-value=0.00019  Score=36.97  Aligned_cols=23  Identities=30%  Similarity=0.528  Sum_probs=17.3

Q ss_pred             ccCCCCcccchhhHHHhhhhhHh
Q psy13090         62 YNCSHCTFKGASSQALKYHMHVD   84 (771)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~h   84 (771)
                      |+|..|.++|..+++|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            67777777777777777777765

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.96  E-value=0.00014  Score=39.33  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=21.4

Q ss_pred             Ccccccc--cccchhhhhhHHHHHHhhcCC
Q psy13090         32 DKFMCYA--CYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        32 k~~~C~~--C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      +||.|.+  |++.|.+..+|.+|..+||||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5777764  788888888888888888775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.0002  Score=38.18  Aligned_cols=24  Identities=33%  Similarity=0.774  Sum_probs=19.8

Q ss_pred             CccCCCCcccchhhHHHhhhhhHh
Q psy13090         61 PYNCSHCTFKGASSQALKYHMHVD   84 (771)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h   84 (771)
                      |-+|+.|.++.+++.+|+.|.++|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            567888888888888888888776

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00024  Score=42.50  Aligned_cols=24  Identities=25%  Similarity=0.638  Sum_probs=14.7

Q ss_pred             CCCCccCCcCCccCCCchhHHHHH
Q psy13090        683 SSNLFRCEKCNLGYSRKDSFEYHM  706 (771)
Q Consensus       683 ~~~~~~C~~C~~~F~~~~~L~~H~  706 (771)
                      |-+||.|.+|++.|.+..++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            455666666666666666666664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00031  Score=37.92  Aligned_cols=23  Identities=22%  Similarity=0.717  Sum_probs=20.3

Q ss_pred             ceecCCCCCcccchhhHHHHHHh
Q psy13090        236 SFTCDECHLCFNTFRRFDSHIRA  258 (771)
Q Consensus       236 ~~~C~~C~~~F~~~~~L~~H~~~  258 (771)
                      ||.|..|+.+|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68899999999999999999875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00018  Score=40.04  Aligned_cols=27  Identities=22%  Similarity=0.437  Sum_probs=17.7

Q ss_pred             Ccccccc--cccchhhhhhHHHHH-HhhcC
Q psy13090         32 DKFMCYA--CYYSTYISTNMKNHI-MTHTG   58 (771)
Q Consensus        32 k~~~C~~--C~~~f~~~~~l~~H~-~~H~~   58 (771)
                      |||.|+.  |.++|+..++-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5677765  777777666666665 66654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.72  E-value=0.00043  Score=37.37  Aligned_cols=28  Identities=29%  Similarity=0.628  Sum_probs=19.5

Q ss_pred             Ceeeccc--CCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCTQ--CDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +||.|..  |.+.|.+...|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666654  777777777777777777765

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.44  E-value=0.00062  Score=37.83  Aligned_cols=27  Identities=33%  Similarity=0.744  Sum_probs=19.6

Q ss_pred             CcccCcchhhcCCHHHHHHHHHhhhcC
Q psy13090        476 PYSCYLCEEKFENSESLRTHMNSLHAL  502 (771)
Q Consensus       476 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  502 (771)
                      ||.|.+|++.|+.+..|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            577777777777777777777766654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.40  E-value=0.001  Score=39.81  Aligned_cols=23  Identities=22%  Similarity=0.608  Sum_probs=8.6

Q ss_pred             ccCCcCCccCCCchhHHHHHHHh
Q psy13090        687 FRCEKCNLGYSRKDSFEYHMTSH  709 (771)
Q Consensus       687 ~~C~~C~~~F~~~~~L~~H~~~H  709 (771)
                      |+|.+|++.|.+-..|--||+.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            33333333333333333333333

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.40  E-value=0.00045  Score=38.40  Aligned_cols=25  Identities=8%  Similarity=0.316  Sum_probs=13.6

Q ss_pred             ccccCCCCCccchhhhhhhHHHHHh
Q psy13090        743 KFSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       743 ~~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      ||.|.+|++.|+.+.-|.+|..+.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            4555555555555555555554433

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.001  Score=35.98  Aligned_cols=24  Identities=25%  Similarity=0.638  Sum_probs=16.1

Q ss_pred             CeeecccCCcccCChhHHHHHHhh
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMV  737 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~  737 (771)
                      +||+|+.|.+-..+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            466777777666677777777654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.01  E-value=0.0015  Score=33.55  Aligned_cols=21  Identities=24%  Similarity=0.597  Sum_probs=12.8

Q ss_pred             eeecccCCcccCChhHHHHHH
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHA  735 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~  735 (771)
                      ||+|..|...|.++.+|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0027  Score=37.57  Aligned_cols=28  Identities=25%  Similarity=0.613  Sum_probs=20.2

Q ss_pred             CCCeeec--ccCCcccCChhHHHHHHhhcc
Q psy13090        712 KEQTFMC--TQCDFTSSSKDTLNTHAMVHA  739 (771)
Q Consensus       712 ~~~~~~C--~~C~~~f~~~~~L~~H~~~H~  739 (771)
                      +++||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4677777  457777777777777777664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.87  E-value=0.0024  Score=32.76  Aligned_cols=26  Identities=8%  Similarity=0.391  Sum_probs=17.5

Q ss_pred             CccccCCCCCccchhhhhhhHHHHHh
Q psy13090        742 LKFSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       742 ~~~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      -||+|.-|...|.++..|..|+...|
T Consensus         1 mpykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhcC
Confidence            05777777777777777777765543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.0021  Score=38.02  Aligned_cols=28  Identities=18%  Similarity=0.339  Sum_probs=20.7

Q ss_pred             CCCcccc--cccccchhhhhhHHHHHHhhc
Q psy13090         30 HKDKFMC--YACYYSTYISTNMKNHIMTHT   57 (771)
Q Consensus        30 ~~k~~~C--~~C~~~f~~~~~l~~H~~~H~   57 (771)
                      .+|||.|  +=|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4677887  457778887777777777775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0042  Score=33.03  Aligned_cols=23  Identities=35%  Similarity=0.769  Sum_probs=13.0

Q ss_pred             eecccCCcccCChhHHHHHHhhc
Q psy13090        716 FMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      -+|+.|.++.+++..|+.|.|+|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            34555555555555555555555

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.43  E-value=0.0027  Score=33.51  Aligned_cols=20  Identities=25%  Similarity=0.511  Sum_probs=10.5

Q ss_pred             CccCCCCcccchhhHHHhhh
Q psy13090         61 PYNCSHCTFKGASSQALKYH   80 (771)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H   80 (771)
                      ||+|..||+.+..+.+|..|
T Consensus         1 pf~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHH
Confidence            45555555555555555555

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.27  E-value=0.0069  Score=31.94  Aligned_cols=22  Identities=36%  Similarity=0.677  Sum_probs=12.8

Q ss_pred             CccCCcCCccCCCchhHHHHHH
Q psy13090        686 LFRCEKCNLGYSRKDSFEYHMT  707 (771)
Q Consensus       686 ~~~C~~C~~~F~~~~~L~~H~~  707 (771)
                      ||+|..||+.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4556666666666666655543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.0044  Score=35.90  Aligned_cols=23  Identities=17%  Similarity=0.073  Sum_probs=18.4

Q ss_pred             cccccchhhhhhHHHHHHhhcCC
Q psy13090         37 YACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        37 ~~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      +.=++.|.....|..|||+||||
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCcchhHHHHHHHHhhcCCC
Confidence            33356688899999999999986

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.0084  Score=31.74  Aligned_cols=25  Identities=20%  Similarity=0.582  Sum_probs=18.5

Q ss_pred             cccCcchhhcCCHHHHHHHHHhhhc
Q psy13090        477 YSCYLCEEKFENSESLRTHMNSLHA  501 (771)
Q Consensus       477 ~~C~~C~~~f~~~~~L~~H~~~~H~  501 (771)
                      |+|+.|+...+.+++|+.|++..|+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            6777777777777777777776553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.0081  Score=31.81  Aligned_cols=24  Identities=21%  Similarity=0.412  Sum_probs=12.7

Q ss_pred             cccCCCCCccchhhhhhhHHHHHh
Q psy13090        744 FSCQNCDFKCSKLSCVRNVISQVA  767 (771)
Q Consensus       744 ~~C~~C~~~f~~~~~l~~H~~~~H  767 (771)
                      |+|+.|+-.-..+|.|+.|+++.|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            455555555555555555555443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.68  E-value=0.02  Score=29.43  Aligned_cols=24  Identities=25%  Similarity=0.807  Sum_probs=14.4

Q ss_pred             cccCcchhhcCCHHHHHHHHHhhh
Q psy13090        477 YSCYLCEEKFENSESLRTHMNSLH  500 (771)
Q Consensus       477 ~~C~~C~~~f~~~~~L~~H~~~~H  500 (771)
                      |.|+.|-+.|+.+.++..|++.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            556666666666666666655444

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.50  E-value=0.021  Score=35.33  Aligned_cols=26  Identities=15%  Similarity=0.503  Sum_probs=20.4

Q ss_pred             CCccCCcCCccCCCchhHHHHHHHhc
Q psy13090        685 NLFRCEKCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       685 ~~~~C~~C~~~F~~~~~L~~H~~~H~  710 (771)
                      ..|.|..|+|.|.....|++|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35778888888888888888887773

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.025  Score=35.05  Aligned_cols=22  Identities=18%  Similarity=0.327  Sum_probs=12.2

Q ss_pred             cccCCCCCccchhhhhhhHHHH
Q psy13090        744 FSCQNCDFKCSKLSCVRNVISQ  765 (771)
Q Consensus       744 ~~C~~C~~~f~~~~~l~~H~~~  765 (771)
                      |.|.+|||.|.....|++|-.+
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQ   28 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQ   28 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHHh
Confidence            5555555555555555555444

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.23  E-value=0.031  Score=28.75  Aligned_cols=21  Identities=24%  Similarity=0.490  Sum_probs=14.1

Q ss_pred             eecccCCcccCChhHHHHHHh
Q psy13090        716 FMCTQCDFTSSSKDTLNTHAM  736 (771)
Q Consensus       716 ~~C~~C~~~f~~~~~L~~H~~  736 (771)
                      |.|++|-+.|..+.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            566666666666666666665

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.87  E-value=0.024  Score=31.13  Aligned_cols=28  Identities=21%  Similarity=0.549  Sum_probs=22.8

Q ss_pred             Cccccc--ccccchhhhhhHHHHHHhhcCC
Q psy13090         32 DKFMCY--ACYYSTYISTNMKNHIMTHTGS   59 (771)
Q Consensus        32 k~~~C~--~C~~~f~~~~~l~~H~~~H~~~   59 (771)
                      |.|.|+  .|+.+|.....|..|+-.||||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            567775  5888888888888888888886

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.46  E-value=0.03  Score=32.32  Aligned_cols=20  Identities=20%  Similarity=0.054  Sum_probs=12.8

Q ss_pred             CcccCChhHHHHHHhhccCC
Q psy13090        722 DFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       722 ~~~f~~~~~L~~H~~~H~~e  741 (771)
                      ++.|..+..|..|||+|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34466666666676666665

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.87  E-value=0.055  Score=29.64  Aligned_cols=28  Identities=21%  Similarity=0.534  Sum_probs=21.5

Q ss_pred             Ceeecc--cCCcccCChhHHHHHHhhccCC
Q psy13090        714 QTFMCT--QCDFTSSSKDTLNTHAMVHADE  741 (771)
Q Consensus       714 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~e  741 (771)
                      +.|.|.  .|+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            357774  4888888888888888888876

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.29  E-value=0.079  Score=29.92  Aligned_cols=24  Identities=29%  Similarity=0.620  Sum_probs=16.4

Q ss_pred             eeecccCCcccCChhHHHHHHhhc
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~~~H  738 (771)
                      .|.|..||++|..+..+.+|-..-
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            467777777777777777775443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.45  E-value=0.07  Score=28.39  Aligned_cols=18  Identities=28%  Similarity=0.484  Sum_probs=14.4

Q ss_pred             CcccchhhHHHhhhhhHh
Q psy13090         67 CTFKGASSQALKYHMHVD   84 (771)
Q Consensus        67 C~~~f~~~~~L~~H~~~h   84 (771)
                      |++.|...+++++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            788888888888887765

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.88  E-value=0.064  Score=30.30  Aligned_cols=26  Identities=23%  Similarity=0.404  Sum_probs=20.4

Q ss_pred             cccccccccchhhhhhHHHHHHhhcC
Q psy13090         33 KFMCYACYYSTYISTNMKNHIMTHTG   58 (771)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~H~~   58 (771)
                      .|.|+.|+++|+++..+.+|--.=+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888888888888888888765554

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.28  E-value=0.11  Score=31.26  Aligned_cols=27  Identities=26%  Similarity=0.684  Sum_probs=21.7

Q ss_pred             CCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCccc
Q psy13090         31 KDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFK   70 (771)
Q Consensus        31 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~   70 (771)
                      ++-|.|+.||+.+             .|+-|-+|++|+..
T Consensus         3 ~~~~~C~vCG~i~-------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICGYTA-------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTCCEE-------------ESCCCSBCTTTCCB
T ss_pred             CcEEECCCCCCEe-------------cCCCCCcCCCCCCc
Confidence            5678999999874             47789999999754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.76  E-value=0.13  Score=29.20  Aligned_cols=30  Identities=13%  Similarity=0.295  Sum_probs=21.1

Q ss_pred             CCCccccCCCCCccchhhhhhhHHHHHhhh
Q psy13090        740 DELKFSCQNCDFKCSKLSCVRNVISQVAQK  769 (771)
Q Consensus       740 ~e~~~~C~~C~~~f~~~~~l~~H~~~~H~~  769 (771)
                      |+..|.|.+|.+.++.-+++-+|..+-|++
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            445677777777777777777777776654

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.04  E-value=0.15  Score=30.29  Aligned_cols=28  Identities=25%  Similarity=0.534  Sum_probs=22.2

Q ss_pred             CCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCccc
Q psy13090         30 HKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTFK   70 (771)
Q Consensus        30 ~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~   70 (771)
                      .++-|.|+.||+.             |.|+-|-+|++|+..
T Consensus         2 ~~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           2 DDKFHLCPICGYI-------------HKGEDFEKCPICFRP   29 (36)
T ss_dssp             SCCEEECSSSCCE-------------EESSCCSBCTTTCCB
T ss_pred             CCCEEECCCCCCE-------------eeCCCCCcCCCCCCc
Confidence            4577899999986             457788999999754

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.61  E-value=0.28  Score=26.22  Aligned_cols=26  Identities=15%  Similarity=0.609  Sum_probs=18.6

Q ss_pred             cccc--CCCCCccchhhhhhhHHHHHhh
Q psy13090        743 KFSC--QNCDFKCSKLSCVRNVISQVAQ  768 (771)
Q Consensus       743 ~~~C--~~C~~~f~~~~~l~~H~~~~H~  768 (771)
                      .|.|  +.|+..|+.+.+.+.|...+|.
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhcc
Confidence            3556  4677788888888888777764

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.56  E-value=0.25  Score=25.76  Aligned_cols=18  Identities=22%  Similarity=0.488  Sum_probs=8.9

Q ss_pred             CCcccCChhHHHHHHhhc
Q psy13090        721 CDFTSSSKDTLNTHAMVH  738 (771)
Q Consensus       721 C~~~f~~~~~L~~H~~~H  738 (771)
                      |++.|..-..|+.|+-+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555554444

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.16  E-value=0.21  Score=29.91  Aligned_cols=27  Identities=26%  Similarity=0.727  Sum_probs=21.6

Q ss_pred             CCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCc
Q psy13090        713 EQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFK  752 (771)
Q Consensus       713 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~  752 (771)
                      ++.|.|.+||..+             .|+.|-.|++||..
T Consensus         3 ~~~~~C~vCG~i~-------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICGYTA-------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTCCEE-------------ESCCCSBCTTTCCB
T ss_pred             CcEEECCCCCCEe-------------cCCCCCcCCCCCCc
Confidence            4679999999754             56788999999865

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.00  E-value=0.3  Score=26.14  Aligned_cols=22  Identities=32%  Similarity=0.525  Sum_probs=13.5

Q ss_pred             ccccccccchhhhhhHHHHHHh
Q psy13090         34 FMCYACYYSTYISTNMKNHIMT   55 (771)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~   55 (771)
                      |.|.+||+-..+...++-|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5566666666666666666543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.94  E-value=0.25  Score=33.53  Aligned_cols=34  Identities=21%  Similarity=0.452  Sum_probs=15.7

Q ss_pred             CeeecccCCcccCChhHHHHHHhhccCCCccccCCCC
Q psy13090        714 QTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCD  750 (771)
Q Consensus       714 ~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~  750 (771)
                      ..|+|+.|+++|+....++.   .-...-.|.|.+|+
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~   46 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCH   46 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSC
T ss_pred             CceECCCCCCCcchhhHHHh---cCcCCCeEEecCCC
Confidence            34555555555544443322   22222345555554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.64  E-value=0.26  Score=33.45  Aligned_cols=41  Identities=15%  Similarity=0.297  Sum_probs=29.9

Q ss_pred             ccCCCCCcccccccccchhhhhhHHHHHHhhcCCCCccCCCCcc
Q psy13090         26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSKPYNCSHCTF   69 (771)
Q Consensus        26 r~H~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~   69 (771)
                      |--+...-|.||.|+++|+.-..+.-   .-.....|.|.+|+-
T Consensus         7 rd~~~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_           7 RDSTNRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCC
T ss_pred             hccccCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCC
Confidence            44456678999999999997665543   344456799999954

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=84.51  E-value=0.32  Score=27.08  Aligned_cols=21  Identities=43%  Similarity=0.787  Sum_probs=14.7

Q ss_pred             eeecccCCcccCChhHHHHHH
Q psy13090        715 TFMCTQCDFTSSSKDTLNTHA  735 (771)
Q Consensus       715 ~~~C~~C~~~f~~~~~L~~H~  735 (771)
                      .|.|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            467777777777777777774

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=84.39  E-value=0.27  Score=29.18  Aligned_cols=28  Identities=21%  Similarity=0.488  Sum_probs=21.9

Q ss_pred             CCCeeecccCCcccCChhHHHHHHhhccCCCccccCCCCCc
Q psy13090        712 KEQTFMCTQCDFTSSSKDTLNTHAMVHADELKFSCQNCDFK  752 (771)
Q Consensus       712 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~e~~~~C~~C~~~  752 (771)
                      .++.|.|.+||..             |.|+.|-+|++||..
T Consensus         2 ~~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           2 DDKFHLCPICGYI-------------HKGEDFEKCPICFRP   29 (36)
T ss_dssp             SCCEEECSSSCCE-------------EESSCCSBCTTTCCB
T ss_pred             CCCEEECCCCCCE-------------eeCCCCCcCCCCCCc
Confidence            3567999999965             456778899999864

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.16  E-value=0.34  Score=25.73  Aligned_cols=18  Identities=17%  Similarity=0.543  Sum_probs=9.1

Q ss_pred             CCccCCCchhHHHHHHHh
Q psy13090        692 CNLGYSRKDSFEYHMTSH  709 (771)
Q Consensus       692 C~~~F~~~~~L~~H~~~H  709 (771)
                      |++.|.+.+.+++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            455555555555554444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.75  E-value=0.28  Score=27.35  Aligned_cols=22  Identities=23%  Similarity=0.448  Sum_probs=20.1

Q ss_pred             ccccCCCCCccchhhhhhhHHH
Q psy13090        743 KFSCQNCDFKCSKLSCVRNVIS  764 (771)
Q Consensus       743 ~~~C~~C~~~f~~~~~l~~H~~  764 (771)
                      .|.|.-||-.|++.+.|..|..
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4999999999999999999964

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.40  E-value=0.52  Score=25.21  Aligned_cols=18  Identities=22%  Similarity=0.449  Sum_probs=7.4

Q ss_pred             ecccCCcccCChhHHHHH
Q psy13090        717 MCTQCDFTSSSKDTLNTH  734 (771)
Q Consensus       717 ~C~~C~~~f~~~~~L~~H  734 (771)
                      .|..||+...+...++-|
T Consensus         4 tc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           4 TCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCSSSCCCCSSHHHHHHH
T ss_pred             echhHHHHHhhccCceEE
Confidence            344444444444444444

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.71  E-value=0.45  Score=31.57  Aligned_cols=31  Identities=26%  Similarity=0.580  Sum_probs=26.8

Q ss_pred             CCCccCCCCcccchhhHHHhhhhhHhHHHHH
Q psy13090         59 SKPYNCSHCTFKGASSQALKYHMHVDMLQYL   89 (771)
Q Consensus        59 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   89 (771)
                      ...|+|..|+-.|.+...|..|+..|..+..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hneefq   46 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   46 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHHHH
Confidence            3569999999999999999999999987643

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.56  E-value=0.34  Score=25.26  Aligned_cols=20  Identities=20%  Similarity=0.594  Sum_probs=11.9

Q ss_pred             cCCccCCCchhHHHHHHHhc
Q psy13090        691 KCNLGYSRKDSFEYHMTSHN  710 (771)
Q Consensus       691 ~C~~~F~~~~~L~~H~~~H~  710 (771)
                      -|++.|..-..|+.|.-+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            46666666666666665554

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.24  E-value=0.21  Score=34.56  Aligned_cols=26  Identities=23%  Similarity=0.376  Sum_probs=20.7

Q ss_pred             CCCccccccchhhccChHHHHHHHhh
Q psy13090        627 SESQLTCDICDRVFQTDKQWKLHMGF  652 (771)
Q Consensus       627 ~~~~~~C~~C~~~f~~~~~L~~H~~~  652 (771)
                      +...|.|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            45668888888888888888888753