Psyllid ID: psy13147

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Protein Sequence
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE
Secondary Structure (PSIPRED)
ccEEEcccccccccccccccccccccEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEcccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccEEccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEEEcccccEEEEcccccccccccccccccEEcccccccHHHHcccccccccccccccEEEEEEccccEEEcccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccEEccccccccHHHcccccc
Coil and Loop (DISEMBL)
mftaylppypsndslackpnpcdpysscsvysehvamcdpcsgpqapwlphcrpeclcnsdcpfnmaclgqkcrdpcqgtcgvnalctvvhhtpacycpqgtignpyehcatplapvpppnpcdhvycgsnavckhtngivtceclptyygngalgcrpecvlntdcpnsaacinnsiie
Flexible Loop (DISEMBL)
mftaylppypsndslackPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE
Low Complexity Region (SEG)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATplapvpppnpCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE
Disordered region (IsUnstruct)
*********************CDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACIN*****
Disordered Region (DISOPRED)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE
Disordered Region (DISEMBL)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE
Disordered Region (DISPRO)
*FTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSII*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
328714521	16577	PREDICTED: hypothetical protein LOC10016	0.938	0.010	0.594	2e-49
270013391	21117	hypothetical protein TcasGA2_TC011986 [T	0.966	0.008	0.556	8e-48
442625922	14825	dumpy, isoform X [Drosophila melanogaste	0.911	0.011	0.539	9e-44
386769088	15105	dumpy, isoform J [Drosophila melanogaste	0.911	0.010	0.539	1e-43
386769086	15638	dumpy, isoform I [Drosophila melanogaste	0.911	0.010	0.539	1e-43
442625920	18014	dumpy, isoform W [Drosophila melanogaste	0.911	0.009	0.539	1e-43
442625928	19560	dumpy, isoform AA [Drosophila melanogast	0.911	0.008	0.539	2e-43
442625916	21657	dumpy, isoform U [Drosophila melanogaste	0.911	0.007	0.539	2e-43
195342490	14551	GM18084 [Drosophila sechellia] gi|194132	0.911	0.011	0.545	3e-43
442625906	20710	dumpy, isoform P [Drosophila melanogaste	0.911	0.007	0.539	3e-43

>gi|328714521|ref|XP_003245382.1| PREDICTED: hypothetical protein LOC100166039 [Acyrthosiphon pisum]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 101/170 (59%), Positives = 120/170 (70%), Gaps = 1/170 (0%)

Query: 11   SNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLG 70
             N +L C P+PCDPYSSC+VY   +AMCDPCS  +  W P C P+CL NSDCPFN+AC+G
Sbjct: 4644 KNMTLPCAPSPCDPYSSCNVYGGQIAMCDPCSSIEQQWNPQCHPQCLYNSDCPFNLACVG 4703

Query: 71   QKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLA-PVPPPNPCDHVYCG 129
            QKC DPC G+CG+ A CTVV+H P C C  G IGNPYEHC+TP    V  P  CD V CG
Sbjct: 4704 QKCIDPCPGSCGIQAECTVVYHNPICSCQSGLIGNPYEHCSTPKQNDVAKPISCDQVQCG 4763

Query: 130  SNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSII 179
            +NAVCK +NG+  C C   YYGN  L CRPECV+NTDC  + +CINN  +
Sbjct: 4764 ANAVCKKSNGMTICVCRQQYYGNPYLSCRPECVINTDCGQTLSCINNKCV 4813

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum]

 Score =  195 bits (495), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 98/176 (55%), Positives = 121/176 (68%), Gaps = 2/176 (1%)

Query: 7    PPYP--SNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPF 64
            PP P  +N S  C P+PC     C+ Y   VA+CDPC GP APW P CRPECL N+DCPF
Sbjct: 7701 PPVPPVANVSKPCLPSPCGTNIECNNYGGQVAICDPCLGPDAPWNPQCRPECLTNADCPF 7760

Query: 65   NMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD 124
            N ACLG  C DPC G+CGVNALCTV++HTPAC CPQG +GNP+EHC+ P  P    + C+
Sbjct: 7761 NKACLGSVCADPCPGSCGVNALCTVINHTPACSCPQGLVGNPFEHCSVPTKPQDRTDTCE 7820

Query: 125  HVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
            +V CG+NA+CK  N  + C C   +YGN  + CRPECV+N DCP   ACIN+  ++
Sbjct: 7821 NVRCGANALCKQQNRALACVCKKGFYGNPWIACRPECVINPDCPLDKACINSKCVD 7876

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625922|ref|NP_001260039.1| dumpy, isoform X [Drosophila melanogaster] gi|440213324|gb|AGB92575.1| dumpy, isoform X [Drosophila melanogaster]

 Score =  181 bits (460), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 8882 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 8941

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 8942 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9001

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 9002 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9046

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769088|ref|NP_001245876.1| dumpy, isoform J [Drosophila melanogaster] gi|383291324|gb|AFH03552.1| dumpy, isoform J [Drosophila melanogaster]

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 9162 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 9221

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 9222 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9281

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 9282 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9326

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769086|ref|NP_001245875.1| dumpy, isoform I [Drosophila melanogaster] gi|383291323|gb|AFH03551.1| dumpy, isoform I [Drosophila melanogaster]

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 9162 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 9221

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 9222 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9281

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 9282 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9326

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625920|ref|NP_001260038.1| dumpy, isoform W [Drosophila melanogaster] gi|440213323|gb|AGB92574.1| dumpy, isoform W [Drosophila melanogaster]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 8882 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 8941

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 8942 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9001

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 9002 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9046

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625928|ref|NP_001260042.1| dumpy, isoform AA [Drosophila melanogaster] gi|440213327|gb|AGB92578.1| dumpy, isoform AA [Drosophila melanogaster]

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 9162 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 9221

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 9222 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9281

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 9282 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9326

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625916|ref|NP_001260036.1| dumpy, isoform U [Drosophila melanogaster] gi|440213321|gb|AGB92572.1| dumpy, isoform U [Drosophila melanogaster]

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 9162 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 9221

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 9222 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9281

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 9282 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9326

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195342490|ref|XP_002037833.1| GM18084 [Drosophila sechellia] gi|194132683|gb|EDW54251.1| GM18084 [Drosophila sechellia]

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 90/165 (54%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC PY  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 4525 CAPSPCGPYDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 4584

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 4585 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 4644

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 4645 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 4689

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625906|ref|NP_001260031.1| dumpy, isoform P [Drosophila melanogaster] gi|440213316|gb|AGB92567.1| dumpy, isoform P [Drosophila melanogaster]

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 17   CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
            C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct: 9162 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 9221

Query: 77   CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDHVYCGSNAVCK 135
            C G+CG NA+C V  H P C CP G  GNPYE C T      PP P C  ++CG+NA CK
Sbjct: 9222 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9281

Query: 136  HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
              +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct: 9282 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9326

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
FB|FBgn0053196	22	dp "dumpy" [Drosophila melanog	0.911	7.454	0.521	1.3e-48
UNIPROTKB|D4AA94	1193	Megf6 "Multiple epidermal grow	0.788	0.119	0.297	2.5e-08
UNIPROTKB|D4A2S7	287	D4A2S7 "Uncharacterized protei	0.716	0.449	0.278	3.2e-08
RGD|1561983	3799	Muc5b "mucin 5B, oligomeric mu	0.694	0.032	0.295	5.6e-08
WB|WBGene00013416	1714	Y64G10A.7 [Caenorhabditis eleg	0.772	0.081	0.276	6.3e-08
MGI|MGI:3779677	236	Gm7137 "predicted gene 7137" [	0.844	0.644	0.262	6.4e-08
UNIPROTKB|A5A8X3	1994	NOTCH4 "Uncharacterized protei	0.8	0.072	0.265	7.4e-08
WB|WBGene00022816	2687	fbn-1 [Caenorhabditis elegans	0.755	0.050	0.289	8.1e-08
ZFIN|ZDB-GENE-090312-12	1513	megf6a "multiple EGF-like-doma	0.7	0.083	0.283	8.3e-08
RGD|621188	1574	Megf6 "multiple EGF-like-domai	0.766	0.087	0.308	1.5e-07

FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)]

 Score = 534 (193.0 bits), Expect = 1.3e-48, P = 1.3e-48
 Identities = 86/165 (52%), Positives = 107/165 (64%)

Query:    17 CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP 76
             C P+PC P+  CSVY + VA+CDPC GP A   P CRPEC+ NSDCPF+ ACLGQ+C DP
Sbjct:  9162 CAPSPCGPHDVCSVYGDGVALCDPCFGPNAQQNPRCRPECVGNSDCPFDRACLGQRCLDP 9221

Query:    77 CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATXXXXXXXXX-XCDHVYCGSNAVCK 135
             C G+CG NA+C V  H P C CP G  GNPYE C T           C  ++CG+NA CK
Sbjct:  9222 CPGSCGRNAICNVYEHNPVCACPTGLFGNPYEQCTTKSVVETPPQPSCAKLHCGANAECK 9281

Query:   136 HTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINNSIIE 180
               +  + C C   Y+G+  +GCRPECVLN+DCP   AC+N+  +E
Sbjct:  9282 RQHSGLACVCRKGYFGDPHIGCRPECVLNSDCPAEKACLNSKCVE 9326

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|D4AA94 Megf6 "Multiple epidermal growth factor-like domains protein 6" [Rattus norvegicus (taxid:10116)]

 Score = 141 (54.7 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 47/158 (29%), Positives = 58/158 (36%)

Query:    14 SLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKC 73
             SLAC      P  +        A CDP SG  A      +    C   CP +    G+ C
Sbjct:  1011 SLACPQGRFGPSCAHVCACRQGAACDPVSG--ACICSPGKTGVRCEHGCPQDR--FGKGC 1066

Query:    74 RDPCQGTCGVNALCTVVHHTP-ACYCPQGTIGNPYEH-CATXXXXXXXXXXCDHVYCGSN 131
                C   C    LC   H T  +C CP G +G   EH C            C   +C +N
Sbjct:  1067 ELKC--ACRNGGLC---HATNGSCSCPLGWMGPHCEHACPAGRYGAACLLEC---FCQNN 1118

Query:   132 AVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPN 169
               C+ T G   C C P +YG     C   C L   CP+
Sbjct:  1119 GSCEPTTG--ACLCGPGFYGQACEHCEWGCPLPLSCPS 1154

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|D4A2S7 D4A2S7 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 131 (51.2 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 46/165 (27%), Positives = 67/165 (40%)

Query:    17 CKPNPCDPYSSCSVYSEHVAMCDP-CSGPQAPWLPHCRPECLCNSDC-PF--NMACLGQK 72
             C+P+ C P  SC + S     C P C  P       CRP C  +S C P   + +C G  
Sbjct:   122 CRPSCCRP--SCCISS----CCRPSCCRPSCCVSSCCRPSCCISSCCRPCCGSSSCCGSS 175

Query:    73 CRDPCQGTCGVNALCTVVHHTPACYCPQGTI-GNPYEHCATXXXXXXXXXXCDHVYCGSN 131
             C   C+ TC +++ C      P+C CP   + G    HC            C    C  +
Sbjct:   176 C---CRPTCCISSCCR-----PSCCCPSCCVSGCCRPHCCVSS--------CCRPQCCQS 219

Query:   132 AVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINN 176
               C+ T    +C C P+        CRP C + + C  S  C+++
Sbjct:   220 VCCQPTCCRPSC-CRPSC-------CRPSCCVPSCCRPSC-CVSS 255

GO:0045095 "keratin filament" evidence=IEA

RGD|1561983 Muc5b "mucin 5B, oligomeric mucus/gel-forming" [Rattus norvegicus (taxid:10116)]

 Score = 143 (55.4 bits), Expect = 5.6e-08, P = 5.6e-08
 Identities = 42/142 (29%), Positives = 55/142 (38%)

Query:    16 ACKPNPCD-PYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCR 74
             AC  + C  P   C+ ++E+   C    G    W    R   LCN  CPFNM    Q+C 
Sbjct:   290 ACVQDLCRCPTCPCATFAEYSRQCAHAGGHPQNW----RRSDLCNWTCPFNMEY--QECS 343

Query:    75 DPCQGTCGV---NALCTVVHHTPACYCPQGTIGNPYEHCATXXXXXXXXXXCDHVYC-GS 130
              PC  TC     + LC   H    C+CP GT+ +   H               H+Y  G 
Sbjct:   344 SPCVDTCSNPQRSQLCED-HCMDGCFCPPGTVLDDVRHLGCLPLEQCHCTHGGHIYAPGE 402

Query:   131 --NAVCKHTN---GIVTCECLP 147
               N  C       G+  C+ LP
Sbjct:   403 SFNTTCSSCTCFGGLWQCQDLP 424

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00013416 Y64G10A.7 [Caenorhabditis elegans (taxid:6239)]

 Score = 139 (54.0 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 45/163 (27%), Positives = 64/163 (39%)

Query:    22 CDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTC 81
             C+    C    E+ A+CDP SG      P  R +  CN  C       G+ C   C+  C
Sbjct:  1273 CEETCEC----ENGALCDPISG-HCSCQPGWRGK-KCNRPCL--KGYFGRHCSQSCR--C 1322

Query:    82 GVNALCTVVHHTPACYCPQGTIGNPY-EHCATXXXXXXXXXXCDHVYCGSNAVCKHTNGI 140
               +  C   H +  C CP+G  G+   E C            CD   CG N++C   +G 
Sbjct:  1323 ANSKSCD--HISGRCQCPKGYAGHSCTELCPDGTFGESCSQKCD---CGENSMCDAISG- 1376

Query:   141 VTCECLPTYYGNGALGCRPECV---LNTDCPNSAACINNSIIE 180
               C C P + G+    C+  CV      DC    +C N  + +
Sbjct:  1377 -KCFCKPGHSGSD---CKSGCVQGRFGPDCNQLCSCENGGVCD 1415

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:3779677 Gm7137 "predicted gene 7137" [Mus musculus (taxid:10090)]

 Score = 126 (49.4 bits), Expect = 6.4e-08, P = 6.4e-08
 Identities = 43/164 (26%), Positives = 63/164 (38%)

Query:    17 CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCR-D 75
             C+P+ C P S C+       +C P S   +P    C+  C C   C    +C    C   
Sbjct:    49 CQPSCCQP-SCCAPAPCLTLVCTPVSCVSSPC---CQSSC-CTPSCCQQSSCQPACCTCS 103

Query:    76 PCQGTCGVNALCTVVHHTPACY---CPQGTIGNPYEHCATXXXXXXXXXXCDHVYCGSNA 132
             PCQ +C V   C  V  TP C    C Q +  +                 C  +  GS++
Sbjct:   104 PCQPSCCVTLCCKPVCCTPICSGPCCQQSSCQSSCCQSPCCVPICCKPVCCTPICSGSSS 163

Query:   133 VCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINN 176
              C+ +     C C P    + +L CRP C      P S+ C ++
Sbjct:   164 CCQPSCCAPVC-CKPC--SSLSLLCRPVCRPACCVPTSSCCASS 204

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005882 "intermediate filament" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|A5A8X3 NOTCH4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 139 (54.0 bits), Expect = 7.4e-08, P = 7.4e-08
 Identities = 44/166 (26%), Positives = 58/166 (34%)

Query:    17 CK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKC-- 73
             C+ P+PC     C       A+     G  +P  P   P   C   CPF     G++C  
Sbjct:    61 CQFPDPCQDAQLCQNGGSCQALLPTLPGSTSPPSP-LTPSFFCT--CPFGFT--GERCQA 115

Query:    74 --RDPCQGTCGVNALCTV-VHHTPACYCPQGTIGNPYEHCATXXXXXXXXXXCDHVYCGS 130
               +DPC   C     C +     P C C  G  G   +H             C    C +
Sbjct:   116 QVKDPCSSFCSKMGRCHIEASGRPRCTCMPGWTGEQCQH----------RDFCSANPCVN 165

Query:   131 NAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTD-CPNSAACIN 175
               VC  T   + C C P + G+       EC LN   CP   +C N
Sbjct:   166 GGVCLATYPQIQCHCPPGFEGHTCEHDVNECFLNPGPCPKGTSCYN 211

GO:0030879 "mammary gland development" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0050793 "regulation of developmental process" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

WB|WBGene00022816 fbn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 140 (54.3 bits), Expect = 8.1e-08, P = 8.1e-08
 Identities = 44/152 (28%), Positives = 54/152 (35%)

Query:    31 YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQK---CRDPCQGTCGVNALC 87
             +     +C   S P    + +    C    DC  N A   +    C   CQ TC     C
Sbjct:    50 FDTSTVICQHSSDPTDLHIHNMSSLCDGKQDCFVNPAMHDEVFPYCEHKCQSTCSGKGAC 109

Query:    88 TVVHHTPACYCPQGTIGNPYEHCATXXXXXXXXXXCDHVYCGSNAVCKHTNGIVTCECLP 147
                   P CYC  G  G+  E              C    C   A C++T G   C CLP
Sbjct:   110 LYDGAKPQCYCDSGFSGSACE--------LQDKNECLEHPCHMMAQCQNTLGSYECRCLP 161

Query:   148 TYYGNGALGCRP--ECV--LNTDCPNSAACIN 175
              Y GNG   C    EC   L + CP  + CIN
Sbjct:   162 GYEGNGH-ECTDIDECSDKLTSRCPEHSKCIN 192

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0002119 "nematode larval development" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

ZFIN|ZDB-GENE-090312-12 megf6a "multiple EGF-like-domains 6a" [Danio rerio (taxid:7955)]

 Score = 130 (50.8 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
 Identities = 44/155 (28%), Positives = 56/155 (36%)

Query:    33 EHVAMCDPCSGP---QAPWL-PHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCT 88
             +H A C   +G     A W   HC   CL  S         G++C   CQ  C     C 
Sbjct:  1085 DHNAACHHITGTCLCPAGWRGTHCEKVCLPGS--------YGKRCAHRCQ--CPHGTSCN 1134

Query:    89 VVHHTPACYCPQGTIGNPYEH-CATXXXXXXXXXXCDHVYCGS-NAVCKHTNGIVTCECL 146
               H T  C CP G  G+  E  C +          C    C   N +C    G+  C C 
Sbjct:  1135 --HVTGQCGCPAGLTGSGCERMCQSGTFGVNCNQVCQ---CSELNQLCHPVTGV--CYCA 1187

Query:   147 PTYYGNGALGCRPECVLNT---DCPNSAACINNSI 178
             P YYG+    C  EC       +C     C+NN +
Sbjct:  1188 PGYYGSK---CETECEAGRYGPNCEQECQCLNNGV 1219

GO:0005509 "calcium ion binding" evidence=IEA

RGD|621188 Megf6 "multiple EGF-like-domains 6" [Rattus norvegicus (taxid:10116)]

 Score = 135 (52.6 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 53/172 (30%), Positives = 64/172 (37%)

Query:    15 LACKPNPCDP--YSS-CSVYSE--HVAMCDPCSGP---QAPWLPHCRPECLCNSDCPFNM 66
             LAC+ N C P  Y++ C +     H  +CD  +G     A W         C S C    
Sbjct:  1074 LACE-NECLPGHYAAGCQLNCSCLHGGICDRLTGHCLCPAGWTGD-----KCQSSCV--S 1125

Query:    67 ACLGQKCRDPCQGTCGVNALCTVVHH-TPACYCPQGTIGNPYEHCATXXXXXXXXXXC-D 124
                G  C + C   C   A C   HH T AC+CP G  G P  HC            C  
Sbjct:  1126 GTFGVHCEEHC--ACRKGASC---HHVTGACFCPPGWRG-P--HCEQACPRGWFGEACAQ 1177

Query:   125 HVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNT---DCPNSAAC 173
                C +NA C H  G   C C P + G   L C   C   T   DC +   C
Sbjct:  1178 RCLCPTNASCHHVTG--ECRCPPGFTG---LSCEQACQPGTFGKDCEHLCQC 1224

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	180
KOG1214|consensus	1289		99.65
KOG1219|consensus	4289		99.5
KOG1214|consensus	1289		99.11
KOG1219|consensus	4289		99.1
KOG4289|consensus	2531		98.93
KOG4289|consensus	2531		98.62
KOG1217|consensus	487		98.53
KOG4260|consensus	350		98.4
KOG1217|consensus	487		98.36
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.32
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.26
KOG1225|consensus	525		98.09
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	98.07
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	98.06
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	98.04
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	98.02
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	98.0
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.82
KOG4260|consensus	350		97.58
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.58
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.38
cd00053	36	EGF Epidermal growth factor domain, found in epide	97.35
KOG1225|consensus	525		97.24
cd00053	36	EGF Epidermal growth factor domain, found in epide	97.19
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	97.18
smart00181	35	EGF Epidermal growth factor-like domain.	97.08
smart00181	35	EGF Epidermal growth factor-like domain.	96.92
PF12662	24	cEGF: Complement Clr-like EGF-like	96.57
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.46
PF12662	24	cEGF: Complement Clr-like EGF-like	95.95
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.65
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	94.76
KOG1226|consensus	783		94.49
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	94.46
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	94.12
KOG0994|consensus	1758		93.81
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	93.23
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	93.22
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	92.96
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	92.69
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	88.43
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	84.73

>KOG1214|consensus

Probab=99.65  E-value=4.3e-16  Score=134.73  Aligned_cols=148  Identities=27%  Similarity=0.624  Sum_probs=116.1

Q ss_pred             CccCCCCCCC----CCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC--CCCCCC-CCCCCCCcccC--
Q psy13147          2 FTAYLPPYPS----NDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR--PECLCN-SDCPFNMACLG--   70 (180)
Q Consensus         2 ~~~~~~~~~~----~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~--~~C~~~-~~C~~~~~C~~--   70 (180)
                      |+..++|+..    ..+++|.  ++-|+.++.|....+..|+|. |..||.|++..|.  +||... ..|..+..|++  
T Consensus       676 ~Sn~igpV~E~S~~~~~npCy~gsh~cdt~a~C~pg~~~~~tce-cs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~p  754 (1289)
T KOG1214|consen  676 VSNQIGPVKEDSDPTPVNPCYDGSHMCDTTARCHPGTGVDYTCE-CSSGYQGDGRNCVDENECATGFHRCGPNSVCINLP  754 (1289)
T ss_pred             hhhcccceecCCCCcccccceecCcccCCCccccCCCCcceEEE-EeeccCCCCCCCCChhhhccCCCCCCCCceeecCC
Confidence            3445566532    4577786  788999999998877669999 9999999999886  577654 45888888865  


Q ss_pred             --C---------------ccc--------CCCc---cCCCCCCeEe--ecC-CCceeeCCCCCccCCCCCccCCCCCCCC
Q psy13147         71 --Q---------------KCR--------DPCQ---GTCGVNALCT--VVH-HTPACYCPQGTIGNPYEHCATPLAPVPP  119 (180)
Q Consensus        71 --~---------------~C~--------~~C~---~~C~~~~~C~--~~~-g~~~C~C~~g~~g~~~~~C~~~~~~~~~  119 (180)
                        +               +|+        +.|.   ..|..++.++  ... +.|+|.|.+||.|++. .|.+       
T Consensus       755 g~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~-~c~d-------  826 (1289)
T KOG1214|consen  755 GSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGH-QCTD-------  826 (1289)
T ss_pred             CceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCcc-cccc-------
Confidence              2               232        4563   3577666554  333 6799999999999998 8887       


Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCCCCccCCcCCCcc
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRP  159 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~d  159 (180)
                      +|+|.++.|+..|+|.+++|+|.|+|.+||.|+++ .|++
T Consensus       827 vDeC~psrChp~A~CyntpgsfsC~C~pGy~GDGf-~CVP  865 (1289)
T KOG1214|consen  827 VDECSPSRCHPAATCYNTPGSFSCRCQPGYYGDGF-QCVP  865 (1289)
T ss_pred             ccccCccccCCCceEecCCCcceeecccCccCCCc-eecC
Confidence            49999999999999999999999999999999998 5754

>KOG1219|consensus

Probab=99.50  E-value=5.1e-14  Score=131.00  Aligned_cols=109  Identities=25%  Similarity=0.660  Sum_probs=95.0

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCC-ccCCCCCCeEeecCCC
Q psy13147         15 LACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPC-QGTCGVNALCTVVHHT   93 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C-~~~C~~~~~C~~~~g~   93 (180)
                      ++|..+||+++|+|...+++.|+|. |++.|+|..  |          ...        +++| .++|..+++|+...++
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~Ck-CpsqysG~~--C----------Ei~--------~epC~snPC~~GgtCip~~n~ 3923 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCK-CPSQYSGNH--C----------EID--------LEPCASNPCLTGGTCIPFYNG 3923 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEe-CcccccCcc--c----------ccc--------cccccCCCCCCCCEEEecCCC
Confidence            8999999999999999987769999 999999852  2          111        2556 3589999999999999


Q ss_pred             ceeeCCCCCccCCCCCccCCCCCCCC-CCCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         94 PACYCPQGTIGNPYEHCATPLAPVPP-PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        94 ~~C~C~~g~~g~~~~~C~~~~~~~~~-~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      |.|.|+.||+|.   .|+.      . +++|..++|+.++.|+|.+|+|.|.|-+||.|..
T Consensus      3924 f~CnC~~gyTG~---~Ce~------~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~~gr~ 3975 (4289)
T KOG1219|consen 3924 FLCNCPNGYTGK---RCEA------RGISECSKNVCGTGGQCINIPGSFHCNCTPGILGRT 3975 (4289)
T ss_pred             eeEeCCCCccCc---eeec------ccccccccccccCCceeeccCCceEeccChhHhccc
Confidence            999999999999   8975      3 5899989999999999999999999999999864

>KOG1214|consensus

Probab=99.11  E-value=5.5e-10  Score=97.59  Aligned_cols=142  Identities=20%  Similarity=0.397  Sum_probs=99.4

Q ss_pred             CCCCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCc--CCCCCCC--------CCCCCC-CCCCCCCccc--C----
Q psy13147         10 PSNDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQA--PWLPHCR--------PECLCN-SDCPFNMACL--G----   70 (180)
Q Consensus        10 ~~~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~--g~~~~C~--------~~C~~~-~~C~~~~~C~--~----   70 (180)
                      .+.|+++|+  ...|+++++|++.+++ |+|. |..||.  +++.+|+        +.|.+. .+|.....++  .    
T Consensus       730 ~c~d~~eca~~~~~CGp~s~Cin~pg~-~rce-C~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs  807 (1289)
T KOG1214|consen  730 NCVDENECATGFHRCGPNSVCINLPGS-YRCE-CRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGS  807 (1289)
T ss_pred             CCCChhhhccCCCCCCCCceeecCCCc-eeEE-EeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCc
Confidence            456888998  5789999999999999 9998 888875  5556664        245444 3454433331  0    


Q ss_pred             -Cc-------------c--cCCC-ccCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-----CCCC
Q psy13147         71 -QK-------------C--RDPC-QGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-----HVYC  128 (180)
Q Consensus        71 -~~-------------C--~~~C-~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-----~~~C  128 (180)
                       ++             |  +|+| .+.|.+++.|.++++++.|+|.+||.|++. .|+...++   ...|.     +..|
T Consensus       808 ~y~C~CLPGfsGDG~~c~dvDeC~psrChp~A~CyntpgsfsC~C~pGy~GDGf-~CVP~~~~---~T~C~~er~hpl~c  883 (1289)
T KOG1214|consen  808 TYSCACLPGFSGDGHQCTDVDECSPSRCHPAATCYNTPGSFSCRCQPGYYGDGF-QCVPDTSS---LTPCEQERFHPLQC  883 (1289)
T ss_pred             eEEEeecCCccCCccccccccccCccccCCCceEecCCCcceeecccCccCCCc-eecCCCcc---CCccccccccceee
Confidence             12             2  3889 468999999999999999999999999988 78652111   13453     2336


Q ss_pred             CCCCeee--ecCCceeeecCCCCccCCcCCC
Q psy13147        129 GSNAVCK--HTNGIVTCECLPTYYGNGALGC  157 (180)
Q Consensus       129 ~~~~~C~--~~~g~~~C~C~~G~~g~~~~~C  157 (180)
                      +.++.|.  ..+.+|.+.|.++-.|++...|
T Consensus       884 hg~t~~~~~~Dp~~~e~p~~~~ppG~~~~~c  914 (1289)
T KOG1214|consen  884 HGSTGFCWCVDPDGHEVPGTQTPPGSTPPHC  914 (1289)
T ss_pred             ccccceeEeeCCCcccCCCCCCCCCCCCCCC
Confidence            6555444  4577789988888777765445

>KOG1219|consensus

Probab=99.10  E-value=1.9e-10  Score=108.11  Aligned_cols=92  Identities=28%  Similarity=0.612  Sum_probs=81.0

Q ss_pred             CCCc-cCCCCCCeEeecC-CCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147         75 DPCQ-GTCGVNALCTVVH-HTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus        75 ~~C~-~~C~~~~~C~~~~-g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      +.|. .+|+.++.|..++ ++|.|.|++-|.|.   +|+.      .+.+|.++||..++.|+...++|.|.|+.||+|.
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~---~CEi------~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~ 3935 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGN---HCEI------DLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGK 3935 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCc---cccc------ccccccCCCCCCCCEEEecCCCeeEeCCCCccCc
Confidence            6674 5899999999887 78999999999999   9986      4689999999999999999999999999999998


Q ss_pred             CcCCC-ccCCcCCCCCCCCCcccCC
Q psy13147        153 GALGC-RPECVLNTDCPNSAACINN  176 (180)
Q Consensus       153 ~~~~C-~deC~~~~~C~~~~~C~n~  176 (180)
                      ....- ++||+. ++|..++.|+|+
T Consensus      3936 ~Ce~~Gi~eCs~-n~C~~gg~C~n~ 3959 (4289)
T KOG1219|consen 3936 RCEARGISECSK-NVCGTGGQCINI 3959 (4289)
T ss_pred             eeeccccccccc-ccccCCceeecc
Confidence            54333 679998 699999999996

>KOG4289|consensus

Probab=98.93  E-value=1e-09  Score=100.05  Aligned_cols=108  Identities=27%  Similarity=0.595  Sum_probs=84.4

Q ss_pred             CCCCCCCCCCCCCCCeee----------------------ecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCccc
Q psy13147         12 NDSLACKPNPCDPYSSCS----------------------VYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACL   69 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~----------------------~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~   69 (180)
                      .|.+.|...||.+..+|+                      +..++ +.|. |++||+|+-  |+          ..    
T Consensus      1177 fdDniClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvng-lrCr-CPpGFTgd~--Ce----------Te---- 1238 (2531)
T KOG4289|consen 1177 FDDNICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNG-LRCR-CPPGFTGDY--CE----------TE---- 1238 (2531)
T ss_pred             ccCchhhcchhHHHHhhhhheeecccCccccccceeeeeccccCc-eeEe-CCCCCCccc--cc----------ch----
Confidence            466778888898888886                      22344 8999 999999963  21          00    


Q ss_pred             CCcccCCC-ccCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeec-CCceeeecCC
Q psy13147         70 GQKCRDPC-QGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHT-NGIVTCECLP  147 (180)
Q Consensus        70 ~~~C~~~C-~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~-~g~~~C~C~~  147 (180)
                          +|+| .++|+++++|...+|+|.|.|.+||+|.   +|+-.   . ....|.+..|.+++.|++. .|+|.|.|+.
T Consensus      1239 ----iDlCYs~pC~nng~C~srEggYtCeCrpg~tGe---hCEvs---~-~agrCvpGvC~nggtC~~~~nggf~c~Cp~ 1307 (2531)
T KOG4289|consen 1239 ----IDLCYSGPCGNNGRCRSREGGYTCECRPGFTGE---HCEVS---A-RAGRCVPGVCKNGGTCVNLLNGGFCCHCPY 1307 (2531)
T ss_pred             ----hHhhhcCCCCCCCceEEecCceeEEecCCcccc---ceeee---c-ccCccccceecCCCEEeecCCCceeccCCC
Confidence                2556 5689999999999999999999999999   88630   0 1245778899999999976 6899999999


Q ss_pred             C
Q psy13147        148 T  148 (180)
Q Consensus       148 G  148 (180)
                      |
T Consensus      1308 g 1308 (2531)
T KOG4289|consen 1308 G 1308 (2531)
T ss_pred             c
Confidence            8

>KOG4289|consensus

Probab=98.62  E-value=3.6e-08  Score=90.44  Aligned_cols=78  Identities=32%  Similarity=0.677  Sum_probs=61.7

Q ss_pred             eecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccCCcCCCc--cCCcCCC
Q psy13147         88 TVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCR--PECVLNT  165 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~--deC~~~~  165 (180)
                      ++..++++|.|++||+|+   .|+.      .+|.|-+.||+++++|....|+|+|.|.+||+|+..+...  --|.- +
T Consensus      1216 i~pvnglrCrCPpGFTgd---~CeT------eiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvp-G 1285 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGFTGD---YCET------EIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVP-G 1285 (2531)
T ss_pred             ccccCceeEeCCCCCCcc---cccc------hhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeecccCcccc-c
Confidence            345588999999999999   8987      5699999999999999999999999999999998542111  13444 4


Q ss_pred             CCCCCCcccC
Q psy13147        166 DCPNSAACIN  175 (180)
Q Consensus       166 ~C~~~~~C~n  175 (180)
                      .|.++++|+|
T Consensus      1286 vC~nggtC~~ 1295 (2531)
T KOG4289|consen 1286 VCKNGGTCVN 1295 (2531)
T ss_pred             eecCCCEEee
Confidence            6666666665

>KOG1217|consensus

Probab=98.53  E-value=9.9e-07  Score=74.23  Aligned_cols=150  Identities=21%  Similarity=0.564  Sum_probs=97.1

Q ss_pred             CCCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC---CCCCCCCCCCCCCcccCCcccCCCc---cCCC
Q psy13147         11 SNDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR---PECLCNSDCPFNMACLGQKCRDPCQ---GTCG   82 (180)
Q Consensus        11 ~~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~---~~C~~~~~C~~~~~C~~~~C~~~C~---~~C~   82 (180)
                      ..+.++|.  ..+|.+.+.|.+..++ |.|. |++||.+......   ..|.....|.....   +. .+.|.   ..+.
T Consensus       166 ~~~~~~C~~~~~~c~~~~~C~~~~~~-~~C~-c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g---~~-~~~c~~~~~~~~  239 (487)
T KOG1217|consen  166 ETDLDECIQYSSPCQNGGTCVNTGGS-YLCS-CPPGYTGSTCETTGNGGTCVDSVACSCPPG---AR-GPECEVSIVECA  239 (487)
T ss_pred             cccccccccCCCCcCCCcccccCCCC-eeEe-CCCCccCCcCcCCCCCceEecceeccCCCC---CC-CCCccccccccc
Confidence            33446887  5569999999999988 9999 9999998642111   11111100000000   00 11221   1233


Q ss_pred             CC-CeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCC-CCCCCCeeeecCCceeeecCCCCccCCcCCCc--
Q psy13147         83 VN-ALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHV-YCGSNAVCKHTNGIVTCECLPTYYGNGALGCR--  158 (180)
Q Consensus        83 ~~-~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~--  158 (180)
                      .+ ++|++..+.|.|.|++||.+.....+.+       +++|... +|..+++|++..+.|.|.|++||.|.....+.  
T Consensus       240 ~~~~~c~~~~~~~~C~~~~g~~~~~~~~~~~-------~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~  312 (487)
T KOG1217|consen  240 SGDGTCVNTVGSYTCRCPEGYTGDACVTCVD-------VDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDV  312 (487)
T ss_pred             CCCCcccccCCceeeeCCCCccccccceeee-------ccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCCcccccc
Confidence            33 8899999999999999999885114555       4888654 38889999999999999999999987641232  


Q ss_pred             cCCcC---CCCCCCCCcc
Q psy13147        159 PECVL---NTDCPNSAAC  173 (180)
Q Consensus       159 deC~~---~~~C~~~~~C  173 (180)
                      ++|..   ...|..+.+|
T Consensus       313 ~~C~~~~~~~~c~~g~~C  330 (487)
T KOG1217|consen  313 DECSPRNAGGPCANGGTC  330 (487)
T ss_pred             ccccccccCCcCCCCccc
Confidence            46652   2456665555

>KOG4260|consensus

Probab=98.40  E-value=2.3e-07  Score=72.22  Aligned_cols=114  Identities=24%  Similarity=0.489  Sum_probs=70.8

Q ss_pred             CCCCCCCCeeeec---CCCeeecCCCCCCCcCCC-CCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecCCCc
Q psy13147         19 PNPCDPYSSCSVY---SEHVAMCDPCSGPQAPWL-PHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTP   94 (180)
Q Consensus        19 ~~~C~~~~~C~~~---~~~~~~C~~C~~G~~g~~-~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~   94 (180)
                      ..||..+++|.--   .|+ -+|. |.+||+|.. ..|-++=-+...=..+.+|      ..|...|.  +.|... +..
T Consensus       149 er~C~GnG~C~GdGsR~Gs-GkCk-C~~GY~Gp~C~~Cg~eyfes~Rne~~lvC------t~Ch~~C~--~~Csg~-~~k  217 (350)
T KOG4260|consen  149 ERPCFGNGSCHGDGSREGS-GKCK-CETGYTGPLCRYCGIEYFESSRNEQHLVC------TACHEGCL--GVCSGE-SSK  217 (350)
T ss_pred             cCCcCCCCcccCCCCCCCC-Cccc-ccCCCCCccccccchHHHHhhcccccchh------hhhhhhhh--cccCCC-CCC
Confidence            3689889999732   234 6999 999999865 2332100000000001111      01111221  123222 333


Q ss_pred             ee-eCCCCCccCCCCCccCCCCCCCCCCCCC--CCCCCCCCeeeecCCceeeecCCCCcc
Q psy13147         95 AC-YCPQGTIGNPYEHCATPLAPVPPPNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYG  151 (180)
Q Consensus        95 ~C-~C~~g~~g~~~~~C~~~~~~~~~~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g  151 (180)
                      .| .|+.||..+.. .|.|      | |||.  +.+|..+..|+|+.|+|.|...+||.+
T Consensus       218 ~C~kCkkGW~lde~-gCvD------v-nEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  218 GCSKCKKGWKLDEE-GCVD------V-NECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             Chhhhcccceeccc-cccc------H-HHHhcCCCCCChhheeecCCCceEecccccccC
Confidence            44 58999988755 7998      4 9994  688999999999999999999999987

>KOG1217|consensus

Probab=98.36  E-value=2.4e-06  Score=71.88  Aligned_cols=118  Identities=22%  Similarity=0.492  Sum_probs=84.3

Q ss_pred             CCCCCCCCCC-CCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeE--
Q psy13147         11 SNDSLACKPN-PCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALC--   87 (180)
Q Consensus        11 ~~d~~~C~~~-~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C--   87 (180)
                      .+++++|... +|.++++|++..+. |.|. |++||.|...   .++.....|....          ....|..++.|  
T Consensus       268 ~~~~~~C~~~~~c~~~~~C~~~~~~-~~C~-C~~g~~g~~~---~~~~~~~~C~~~~----------~~~~c~~g~~C~~  332 (487)
T KOG1217|consen  268 CVDVDSCALIASCPNGGTCVNVPGS-YRCT-CPPGFTGRLC---TECVDVDECSPRN----------AGGPCANGGTCNT  332 (487)
T ss_pred             eeeccccCCCCccCCCCeeecCCCc-ceee-CCCCCCCCCC---ccccccccccccc----------cCCcCCCCccccc
Confidence            4578999854 39989999999988 9999 9999998753   1122112221100          01246666666  


Q ss_pred             eecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeee-cCCceeeecCCCCccC
Q psy13147         88 TVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKH-TNGIVTCECLPTYYGN  152 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~-~~g~~~C~C~~G~~g~  152 (180)
                      ....+.+.|.|..+|.|.   .|+.      ..++|...++..++.|++ ..+.|.|.|+.+|.+.
T Consensus       333 ~~~~~~~~C~c~~~~~g~---~C~~------~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~~~  389 (487)
T KOG1217|consen  333 LGSFGGFRCACGPGFTGR---RCED------SNDECASSPCCPGGTCVNETPGSYRCACPAGFAGK  389 (487)
T ss_pred             CCCCCCCCcCCCCCCCCC---cccc------CCccccCCccccCCEeccCCCCCeEecCCCccccC
Confidence            233357889999998777   8886      324887777888999999 7999999999999874

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.32  E-value=2.2e-07  Score=52.90  Aligned_cols=33  Identities=21%  Similarity=0.480  Sum_probs=30.0

Q ss_pred             CCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcC
Q psy13147         13 DSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAP   47 (180)
Q Consensus        13 d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g   47 (180)
                      |||||.  .+.|..++.|+|+.|+ |.|. |++||..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gs-y~C~-C~~Gy~~   35 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGS-YSCS-CPPGYEL   35 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTE-EEEE-ESTTEEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCC-EEee-CCCCcEE
Confidence            689998  5689989999999999 9999 9999983

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.26  E-value=7.1e-07  Score=50.74  Aligned_cols=32  Identities=31%  Similarity=0.707  Sum_probs=28.3

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeeecCCCCcc
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYG  151 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g  151 (180)
                      +|||.  .+.|..++.|+|+.|+|.|.|++||..
T Consensus         2 idEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~   35 (42)
T PF07645_consen    2 IDECAEGPHNCPENGTCVNTEGSYSCSCPPGYEL   35 (42)
T ss_dssp             SSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEE
T ss_pred             ccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEE
Confidence            38995  367988999999999999999999984

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1225|consensus

Probab=98.09  E-value=1.8e-05  Score=67.78  Aligned_cols=11  Identities=18%  Similarity=0.181  Sum_probs=7.7

Q ss_pred             ecCCCCCCCcCC
Q psy13147         37 MCDPCSGPQAPW   48 (180)
Q Consensus        37 ~C~~C~~G~~g~   48 (180)
                      +|. |++||+|+
T Consensus       266 ~CI-C~~Gf~G~  276 (525)
T KOG1225|consen  266 RCI-CPPGFTGD  276 (525)
T ss_pred             eEe-CCCCCcCC
Confidence            677 77777765

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=98.07  E-value=2.1e-06  Score=47.01  Aligned_cols=29  Identities=45%  Similarity=0.882  Sum_probs=24.3

Q ss_pred             CCCCCCCeeeecCCceeeecCCCCccCCc
Q psy13147        126 VYCGSNAVCKHTNGIVTCECLPTYYGNGA  154 (180)
Q Consensus       126 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  154 (180)
                      ..|+.+|.|+++.++|+|+|++||.|++.
T Consensus         6 ~~C~~nA~C~~~~~~~~C~C~~Gy~GdG~   34 (36)
T PF12947_consen    6 GGCHPNATCTNTGGSYTCTCKPGYEGDGF   34 (36)
T ss_dssp             GGS-TTCEEEE-TTSEEEEE-CEEECCST
T ss_pred             CCCCCCcEeecCCCCEEeECCCCCccCCc
Confidence            57899999999999999999999999986

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=98.06  E-value=1.3e-06  Score=47.88  Aligned_cols=32  Identities=19%  Similarity=0.404  Sum_probs=25.3

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCC
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHC   52 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C   52 (180)
                      ...|+.+|+|+++.++ |.|. |++||.|++..|
T Consensus         5 ~~~C~~nA~C~~~~~~-~~C~-C~~Gy~GdG~~C   36 (36)
T PF12947_consen    5 NGGCHPNATCTNTGGS-YTCT-CKPGYEGDGFFC   36 (36)
T ss_dssp             GGGS-TTCEEEE-TTS-EEEE-E-CEEECCSTCE
T ss_pred             CCCCCCCcEeecCCCC-EEeE-CCCCCccCCcCC
Confidence            3579999999999998 9999 999999998543

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=98.04  E-value=1.7e-06  Score=46.20  Aligned_cols=30  Identities=23%  Similarity=0.575  Sum_probs=26.5

Q ss_pred             CCCCCCCCCCeeeecC-CCeeecCCCCCCCcCC
Q psy13147         17 CKPNPCDPYSSCSVYS-EHVAMCDPCSGPQAPW   48 (180)
Q Consensus        17 C~~~~C~~~~~C~~~~-~~~~~C~~C~~G~~g~   48 (180)
                      |.++||.++|+|++.. +. |+|. |++||+|.
T Consensus         1 C~~~~C~n~g~C~~~~~~~-y~C~-C~~G~~G~   31 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGG-YTCE-CPPGYTGK   31 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSE-EEEE-EBTTEEST
T ss_pred             CCCCcCCCCeEEEeCCCCC-EEeE-CCCCCccC
Confidence            5677999999999998 55 9999 99999985

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=98.02  E-value=3.6e-06  Score=44.88  Aligned_cols=30  Identities=37%  Similarity=0.822  Sum_probs=26.5

Q ss_pred             CCCCCCCCCCeeeecC-CceeeecCCCCccC
Q psy13147        123 CDHVYCGSNAVCKHTN-GIVTCECLPTYYGN  152 (180)
Q Consensus       123 C~~~~C~~~~~C~~~~-g~~~C~C~~G~~g~  152 (180)
                      |.+++|.++++|++.. ++|+|.|++||.|.
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            3456899999999998 99999999999885

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=98.00  E-value=9.7e-06  Score=44.72  Aligned_cols=32  Identities=25%  Similarity=0.558  Sum_probs=29.1

Q ss_pred             CCCCCCC-CCCCCCCeeeecCCCeeecCCCCCCCc
Q psy13147         13 DSLACKP-NPCDPYSSCSVYSEHVAMCDPCSGPQA   46 (180)
Q Consensus        13 d~~~C~~-~~C~~~~~C~~~~~~~~~C~~C~~G~~   46 (180)
                      |+++|.. .+|.++++|+++.++ |.|. |++||+
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~-~~C~-C~~g~~   33 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGS-YRCE-CPPGYT   33 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCC-eEeE-CCCCCc
Confidence            5789986 799988999999998 9999 999998

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.82  E-value=3.2e-05  Score=42.58  Aligned_cols=31  Identities=32%  Similarity=0.738  Sum_probs=27.9

Q ss_pred             CCCCCC-CCCCCCCeeeecCCceeeecCCCCc
Q psy13147        120 PNPCDH-VYCGSNAVCKHTNGIVTCECLPTYY  150 (180)
Q Consensus       120 ~d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~  150 (180)
                      +++|.. .+|..++.|+++.++|.|.|+.||.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence            378876 7898889999999999999999998

>KOG4260|consensus

Probab=97.58  E-value=3.3e-05  Score=60.41  Aligned_cols=71  Identities=24%  Similarity=0.466  Sum_probs=55.0

Q ss_pred             CCCCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCC-CCCCe
Q psy13147         10 PSNDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTC-GVNAL   86 (180)
Q Consensus        10 ~~~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C-~~~~~   86 (180)
                      .+.|||||.  +.||..+..|+|+.|+ |.|. +.+||.+.    .|+|+.                  |...| ..+..
T Consensus       232 gCvDvnEC~~ep~~c~~~qfCvNteGS-f~C~-dk~Gy~~g----~d~C~~------------------~~d~~~~kn~~  287 (350)
T KOG4260|consen  232 GCVDVNECQNEPAPCKAHQFCVNTEGS-FKCE-DKEGYKKG----VDECQF------------------CADVCASKNRP  287 (350)
T ss_pred             ccccHHHHhcCCCCCChhheeecCCCc-eEec-ccccccCC----hHHhhh------------------hhhhcccCCCC
Confidence            468999998  7899999999999999 9999 99999874    333321                  01112 34677


Q ss_pred             EeecCCCceeeCCCCCcc
Q psy13147         87 CTVVHHTPACYCPQGTIG  104 (180)
Q Consensus        87 C~~~~g~~~C~C~~g~~g  104 (180)
                      |.++.++|+|.|..|+.-
T Consensus       288 c~ni~~~~r~v~f~~~~~  305 (350)
T KOG4260|consen  288 CMNIDGQYRCVCFSGLII  305 (350)
T ss_pred             cccCCccEEEEeccccee
Confidence            899999999999988743

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.58  E-value=9.1e-05  Score=40.22  Aligned_cols=34  Identities=24%  Similarity=0.473  Sum_probs=29.6

Q ss_pred             CCCCCCC-CCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         13 DSLACKP-NPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        13 d~~~C~~-~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      ++++|.. .+|.+++.|++..+. |.|. |++||.|.
T Consensus         1 ~~~~C~~~~~C~~~~~C~~~~~~-~~C~-C~~g~~g~   35 (38)
T cd00054           1 DIDECASGNPCQNGGTCVNTVGS-YRCS-CPPGYTGR   35 (38)
T ss_pred             CcccCCCCCCcCCCCEeECCCCC-eEeE-CCCCCcCC
Confidence            4678886 799988999999988 9999 99999873

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.38  E-value=0.00027  Score=38.30  Aligned_cols=32  Identities=31%  Similarity=0.778  Sum_probs=28.3

Q ss_pred             CCCCC-CCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDH-VYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ++|.. .+|..++.|++..++|.|.|+.||.|.
T Consensus         3 ~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~   35 (38)
T cd00054           3 DECASGNPCQNGGTCVNTVGSYRCSCPPGYTGR   35 (38)
T ss_pred             ccCCCCCCcCCCCEeECCCCCeEeECCCCCcCC
Confidence            77866 789888999999999999999999884

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=97.35  E-value=0.00033  Score=37.30  Aligned_cols=28  Identities=32%  Similarity=0.765  Sum_probs=25.1

Q ss_pred             CCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        125 HVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       125 ~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ..+|..++.|+++.++|.|.|+.||.|+
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCCCccc
Confidence            4678778999999999999999999887

>KOG1225|consensus

Probab=97.24  E-value=0.002  Score=55.54  Aligned_cols=105  Identities=27%  Similarity=0.732  Sum_probs=67.3

Q ss_pred             ecCCCCCCCcCCC---CCCCCCCCCCCCCCCCCcccCCccc-------CC-----CccCCCCCCeEeecCCCceeeCCCC
Q psy13147         37 MCDPCSGPQAPWL---PHCRPECLCNSDCPFNMACLGQKCR-------DP-----CQGTCGVNALCTVVHHTPACYCPQG  101 (180)
Q Consensus        37 ~C~~C~~G~~g~~---~~C~~~C~~~~~C~~~~~C~~~~C~-------~~-----C~~~C~~~~~C~~~~g~~~C~C~~g  101 (180)
                      .|. |+.+|++..   ..|..-      |.....|+.++|+       +.     |...|..++.+++  +  .|.|.+|
T Consensus       235 ic~-c~~~~~g~~c~~~~C~~~------c~~~g~c~~G~CIC~~Gf~G~dC~e~~Cp~~cs~~g~~~~--g--~CiC~~g  303 (525)
T KOG1225|consen  235 ICE-CPEGYFGPLCSTIYCPGG------CTGRGQCVEGRCICPPGFTGDDCDELVCPVDCSGGGVCVD--G--ECICNPG  303 (525)
T ss_pred             eee-cCCceeCCccccccCCCC------CcccceEeCCeEeCCCCCcCCCCCcccCCcccCCCceecC--C--EeecCCC
Confidence            688 888888753   123221      2222345555554       22     3333554454443  2  8999999


Q ss_pred             CccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccCCcCCCccCCcCCCCCCCCCcccCC
Q psy13147        102 TIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINN  176 (180)
Q Consensus       102 ~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~deC~~~~~C~~~~~C~n~  176 (180)
                      |.|.   .|+.        -.| +..|..+++|+  .|  +|.|.+||+|..       |.... |+..+.|+|.
T Consensus       304 ~~G~---dCs~--------~~c-padC~g~G~Ci--~G--~C~C~~Gy~G~~-------C~~~~-C~~~g~cv~g  354 (525)
T KOG1225|consen  304 YSGK---DCSI--------RRC-PADCSGHGKCI--DG--ECLCDEGYTGEL-------CIQRA-CSGGGQCVNG  354 (525)
T ss_pred             cccc---cccc--------ccC-CccCCCCCccc--CC--ceEeCCCCcCCc-------ccccc-cCCCceeccC
Confidence            9998   7863        334 46788999998  44  799999999873       44433 8777888887

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=97.19  E-value=0.00049  Score=36.61  Aligned_cols=30  Identities=23%  Similarity=0.481  Sum_probs=26.0

Q ss_pred             CC-CCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         17 CK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        17 C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      |. ..+|.++++|++..+. |.|. |+.||.|.
T Consensus         2 C~~~~~C~~~~~C~~~~~~-~~C~-C~~g~~g~   32 (36)
T cd00053           2 CAASNPCSNGGTCVNTPGS-YRCV-CPPGYTGD   32 (36)
T ss_pred             CCCCCCCCCCCEEecCCCC-eEeE-CCCCCccc
Confidence            44 5789888999999888 9999 99999885

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=97.18  E-value=5.4e-05  Score=56.15  Aligned_cols=127  Identities=24%  Similarity=0.432  Sum_probs=73.3

Q ss_pred             CCCCCCCeeeecCCCeeecCCCCCCCcCCC-CCCC--CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecC-----
Q psy13147         20 NPCDPYSSCSVYSEHVAMCDPCSGPQAPWL-PHCR--PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVH-----   91 (180)
Q Consensus        20 ~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~-~~C~--~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~-----   91 (180)
                      ..|. +|.-+....+ |.|. |.+||.... .+|+  .+|...      .      -+   ..+|+.-+.|++..     
T Consensus         6 T~CK-NG~LiQMSNH-fEC~-Cnegfvl~~EntCE~kv~C~~~------e------~~---~K~Cgdya~C~~~~~~~~~   67 (197)
T PF06247_consen    6 TICK-NGYLIQMSNH-FECK-CNEGFVLKNENTCEEKVECDKL------E------NV---NKPCGDYAKCINQANKGEE   67 (197)
T ss_dssp             ---B-TEEEEEESSE-EEEE-ESTTEEEEETTEEEE----SG-------G------GT---TSEEETTEEEEE-SSTTSS
T ss_pred             cccc-CCEEEEccCc-eEEE-cCCCcEEccccccccceecCcc------c------cc---CccccchhhhhcCCCcccc
Confidence            4564 6788888888 9999 999998753 2332  223210      0      00   12577788998765     


Q ss_pred             CCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeec---CCceeeecCCCCccCCcCCCc----cCCcCC
Q psy13147         92 HTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHT---NGIVTCECLPTYYGNGALGCR----PECVLN  164 (180)
Q Consensus        92 g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~---~g~~~C~C~~G~~g~~~~~C~----deC~~~  164 (180)
                      ..|.|.|.+||+.... .|..        ++|....|+ .+.|+-.   +....|+|.-|++.+....|.    .+|.+ 
T Consensus        68 ~~~~C~C~~gY~~~~~-vCvp--------~~C~~~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G~T~C~L-  136 (197)
T PF06247_consen   68 RAYKCDCINGYILKQG-VCVP--------NKCNNKDCG-SGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTGETKCSL-  136 (197)
T ss_dssp             TSEEEEE-TTEEESSS-SEEE--------GGGSS---T-TEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE-------
T ss_pred             eeEEEecccCceeeCC-eEch--------hhcCceecC-CCeEEecCCCCCCceeEeeeceEeccCCcccCCCccceee-
Confidence            5799999999988755 6753        677777887 6899933   445699999999944333452    26776 


Q ss_pred             CCCCCCCcccCC
Q psy13147        165 TDCPNSAACINN  176 (180)
Q Consensus       165 ~~C~~~~~C~n~  176 (180)
                       .|..+..|..+
T Consensus       137 -KCk~nE~CK~~  147 (197)
T PF06247_consen  137 -KCKENEECKLV  147 (197)
T ss_dssp             ---TTTEEEEEE
T ss_pred             -ecCCCcceeee
Confidence             46666666543

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.08  E-value=0.00086  Score=35.92  Aligned_cols=26  Identities=38%  Similarity=0.862  Sum_probs=23.3

Q ss_pred             CCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        126 VYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       126 ~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      .+|..+ +|+++.++|+|.|++||.|+
T Consensus         6 ~~C~~~-~C~~~~~~~~C~C~~g~~g~   31 (35)
T smart00181        6 GPCSNG-TCINTPGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCCC-EEECCCCCeEeECCCCCccC
Confidence            578777 99999999999999999884

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.92  E-value=0.0011  Score=35.50  Aligned_cols=30  Identities=20%  Similarity=0.480  Sum_probs=24.8

Q ss_pred             CCCC-CCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         16 ACKP-NPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        16 ~C~~-~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +|.. .+|.++ .|++..++ |.|. |++||.|.
T Consensus         1 ~C~~~~~C~~~-~C~~~~~~-~~C~-C~~g~~g~   31 (35)
T smart00181        1 ECASGGPCSNG-TCINTPGS-YTCS-CPPGYTGD   31 (35)
T ss_pred             CCCCcCCCCCC-EEECCCCC-eEeE-CCCCCccC
Confidence            3555 689877 99999888 9999 99999884

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=96.57  E-value=0.0025  Score=31.46  Aligned_cols=20  Identities=30%  Similarity=0.702  Sum_probs=15.7

Q ss_pred             CceeeCCCCCccCC-CCCccC
Q psy13147         93 TPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        93 ~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      +|+|+|++||...+ ...|++
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~D   21 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCED   21 (24)
T ss_pred             CEEeeCCCCCcCCCCCCcccc
Confidence            58999999998643 238988

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.46  E-value=0.00097  Score=49.58  Aligned_cols=106  Identities=25%  Similarity=0.671  Sum_probs=64.8

Q ss_pred             CCCCCCCeeeecCC----CeeecCCCCCCCcCCCCCCC-CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecC---
Q psy13147         20 NPCDPYSSCSVYSE----HVAMCDPCSGPQAPWLPHCR-PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVH---   91 (180)
Q Consensus        20 ~~C~~~~~C~~~~~----~~~~C~~C~~G~~g~~~~C~-~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~---   91 (180)
                      .+|+..+.|++.+.    ..|.|. |.+||......|. ++|..                    -.|+ .+.|+..+   
T Consensus        50 K~Cgdya~C~~~~~~~~~~~~~C~-C~~gY~~~~~vCvp~~C~~--------------------~~Cg-~GKCI~d~~~~  107 (197)
T PF06247_consen   50 KPCGDYAKCINQANKGEERAYKCD-CINGYILKQGVCVPNKCNN--------------------KDCG-SGKCILDPDNP  107 (197)
T ss_dssp             SEEETTEEEEE-SSTTSSTSEEEE-E-TTEEESSSSEEEGGGSS-----------------------T-TEEEEEEEGGG
T ss_pred             ccccchhhhhcCCCcccceeEEEe-cccCceeeCCeEchhhcCc--------------------eecC-CCeEEecCCCC
Confidence            68999999998874    349999 9999998765554 33432                    1344 46776543   


Q ss_pred             CCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         92 HTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        92 g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ....|+|.-|+..+....|...     -..+|. .-|-.+..|..+.+-|+|.+..||.+++
T Consensus       108 ~~~~CSC~IGkV~~dn~kCtk~-----G~T~C~-LKCk~nE~CK~~~~~Y~C~~~~~~~~~~  163 (197)
T PF06247_consen  108 NNPTCSCNIGKVPDDNKKCTKT-----GETKCS-LKCKENEECKLVDGYYKCVCKEGFPGDG  163 (197)
T ss_dssp             SEEEEEE-TEEETTTTTESEEE-----E---------TTTEEEEEETTEEEEEE-TT-EEET
T ss_pred             CCceeEeeeceEeccCCcccCC-----Ccccee-eecCCCcceeeeCcEEEeecCCCCCCCC
Confidence            3459999999984333356420     013453 3467788999999999999999998654

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=95.95  E-value=0.0071  Score=29.84  Aligned_cols=13  Identities=38%  Similarity=0.759  Sum_probs=11.3

Q ss_pred             ceeeecCCCCccC
Q psy13147        140 IVTCECLPTYYGN  152 (180)
Q Consensus       140 ~~~C~C~~G~~g~  152 (180)
                      +|+|+|++||+..
T Consensus         1 sy~C~C~~Gy~l~   13 (24)
T PF12662_consen    1 SYTCSCPPGYQLS   13 (24)
T ss_pred             CEEeeCCCCCcCC
Confidence            6999999999854

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.65  E-value=0.0097  Score=32.41  Aligned_cols=22  Identities=32%  Similarity=0.697  Sum_probs=17.9

Q ss_pred             CeeeecCCceeeecCCCCccCC
Q psy13147        132 AVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       132 ~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ..|++++++|+|.|++||....
T Consensus        10 h~C~~~~g~~~C~C~~Gy~L~~   31 (36)
T PF14670_consen   10 HICVNTPGSYRCSCPPGYKLAE   31 (36)
T ss_dssp             SEEEEETTSEEEE-STTEEE-T
T ss_pred             CCCccCCCceEeECCCCCEECc
Confidence            4899999999999999998653

...

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=94.76  E-value=0.021  Score=31.17  Aligned_cols=30  Identities=33%  Similarity=0.640  Sum_probs=21.5

Q ss_pred             CCCCCCCCeeeecC-CceeeecCCCCccCCc
Q psy13147        125 HVYCGSNAVCKHTN-GIVTCECLPTYYGNGA  154 (180)
Q Consensus       125 ~~~C~~~~~C~~~~-g~~~C~C~~G~~g~~~  154 (180)
                      ...|..+|.|++.. |++.|+|..||..++.
T Consensus         4 ~~~cP~NA~C~~~~dG~eecrCllgyk~~~~   34 (37)
T PF12946_consen    4 DTKCPANAGCFRYDDGSEECRCLLGYKKVGG   34 (37)
T ss_dssp             SS---TTEEEEEETTSEEEEEE-TTEEEETT
T ss_pred             CccCCCCcccEEcCCCCEEEEeeCCccccCC
Confidence            34677899999775 9999999999987654

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>KOG1226|consensus

Probab=94.49  E-value=0.52  Score=42.38  Aligned_cols=116  Identities=22%  Similarity=0.559  Sum_probs=63.0

Q ss_pred             ecCCCCCCCcCCCCCCCCCCCCC----CCCCCCCcccCCcccCCCccCCCCCCeEeecCCCceeeCCCCCccCC-CCCcc
Q psy13147         37 MCDPCSGPQAPWLPHCRPECLCN----SDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTPACYCPQGTIGNP-YEHCA  111 (180)
Q Consensus        37 ~C~~C~~G~~g~~~~C~~~C~~~----~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~g~~g~~-~~~C~  111 (180)
                      .|. |.+||.|..-.|.......    ..|+....          ...|...+.|+=    -.|.|.+...+.- ...|+
T Consensus       479 ~C~-C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~----------~~vCSgrG~C~C----GqC~C~~~~~~~i~G~fCE  543 (783)
T KOG1226|consen  479 QCR-CDEGWLGKKCECSTDELSSSEEEDKCRENSD----------SPVCSGRGDCVC----GQCVCHKPDNGKIYGKFCE  543 (783)
T ss_pred             cee-cCCCCCCCcccCCccccCcHhHHhhccCCCC----------CCCcCCCCcEeC----CceEecCCCCCceeeeeee
Confidence            789 9999999754442111110    11111110          014555555542    2467766655211 01665


Q ss_pred             CCCCCCCCCCCCC---CCCCCCCCeeeecCCceeeecCCCCccCCcCCC---ccCCcCC--CCCCCCCcccCCcc
Q psy13147        112 TPLAPVPPPNPCD---HVYCGSNAVCKHTNGIVTCECLPTYYGNGALGC---RPECVLN--TDCPNSAACINNSI  178 (180)
Q Consensus       112 ~~~~~~~~~d~C~---~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C---~deC~~~--~~C~~~~~C~n~~~  178 (180)
                      -      +--.|.   ...|..+++|.=  |  +|+|.+||+|+.. .|   .|-|+..  ..|...+.|.=.+|
T Consensus       544 C------DnfsC~r~~g~lC~g~G~C~C--G--~CvC~~GwtG~~C-~C~~std~C~~~~G~iCSGrG~C~Cg~C  607 (783)
T KOG1226|consen  544 C------DNFSCERHKGVLCGGHGRCEC--G--RCVCNPGWTGSAC-NCPLSTDTCESSDGQICSGRGTCECGRC  607 (783)
T ss_pred             c------cCcccccccCcccCCCCeEeC--C--cEEcCCCCccCCC-CCCCCCccccCCCCceeCCCceeeCCce
Confidence            4      212343   246888888843  2  6999999999865 23   3566653  56766666665544

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=94.46  E-value=0.032  Score=30.34  Aligned_cols=22  Identities=23%  Similarity=0.493  Sum_probs=17.9

Q ss_pred             CeEeecCCCceeeCCCCCccCC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNP  106 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~  106 (180)
                      ..|++++++|+|.|++||....
T Consensus        10 h~C~~~~g~~~C~C~~Gy~L~~   31 (36)
T PF14670_consen   10 HICVNTPGSYRCSCPPGYKLAE   31 (36)
T ss_dssp             SEEEEETTSEEEE-STTEEE-T
T ss_pred             CCCccCCCceEeECCCCCEECc
Confidence            5899999999999999998753

...

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=94.12  E-value=0.014  Score=31.77  Aligned_cols=34  Identities=18%  Similarity=0.364  Sum_probs=22.9

Q ss_pred             CCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCC
Q psy13147         17 CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPH   51 (180)
Q Consensus        17 C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~   51 (180)
                      |....|+.|+.|.+...+.+.|. |..||..++..
T Consensus         2 C~~~~cP~NA~C~~~~dG~eecr-Cllgyk~~~~~   35 (37)
T PF12946_consen    2 CIDTKCPANAGCFRYDDGSEECR-CLLGYKKVGGK   35 (37)
T ss_dssp             -SSS---TTEEEEEETTSEEEEE-E-TTEEEETTE
T ss_pred             ccCccCCCCcccEEcCCCCEEEE-eeCCccccCCC
Confidence            44567889999999884449999 99999876543

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>KOG0994|consensus

Probab=93.81  E-value=0.37  Score=45.26  Aligned_cols=60  Identities=22%  Similarity=0.512  Sum_probs=35.1

Q ss_pred             eEeecCCCcee-eCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCC-------C-Ceee--ecCCceeeecCCCCccCCc
Q psy13147         86 LCTVVHHTPAC-YCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGS-------N-AVCK--HTNGIVTCECLPTYYGNGA  154 (180)
Q Consensus        86 ~C~~~~g~~~C-~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~-------~-~~C~--~~~g~~~C~C~~G~~g~~~  154 (180)
                      .|....+++.| +|..||.|++. .=..        ..|.+-||..       + -.|.  +......|.|.+||+|+-.
T Consensus       877 ~CqD~T~G~~CdrCl~GyyGdP~-lg~g--------~~CrPCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RC  947 (1758)
T KOG0994|consen  877 DCQDSTTGHSCDRCLDGYYGDPR-LGSG--------IGCRPCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRC  947 (1758)
T ss_pred             cccccccccchhhhhccccCCcc-cCCC--------CCCCCCCCCCCCccchhccccccccccccceeeecccCccccch
Confidence            35566677888 59999999874 1111        2233223311       1 1233  2345568999999998754

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=93.23  E-value=0.11  Score=27.39  Aligned_cols=25  Identities=24%  Similarity=0.590  Sum_probs=20.8

Q ss_pred             CCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        126 VYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       126 ~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ..|..+++|+..  ..+|+|.+||.|.
T Consensus         6 ~~C~~~G~C~~~--~g~C~C~~g~~G~   30 (32)
T PF07974_consen    6 NICSGHGTCVSP--CGRCVCDSGYTGP   30 (32)
T ss_pred             CccCCCCEEeCC--CCEEECCCCCcCC
Confidence            368889999877  4589999999986

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=93.22  E-value=0.13  Score=27.17  Aligned_cols=24  Identities=25%  Similarity=0.634  Sum_probs=19.8

Q ss_pred             CCCCCCeEeecCCCceeeCCCCCccC
Q psy13147         80 TCGVNALCTVVHHTPACYCPQGTIGN  105 (180)
Q Consensus        80 ~C~~~~~C~~~~g~~~C~C~~g~~g~  105 (180)
                      .|..+++|+..  ..+|.|.+||.|.
T Consensus         7 ~C~~~G~C~~~--~g~C~C~~g~~G~   30 (32)
T PF07974_consen    7 ICSGHGTCVSP--CGRCVCDSGYTGP   30 (32)
T ss_pred             ccCCCCEEeCC--CCEEECCCCCcCC
Confidence            47778888865  5789999999987

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=92.96  E-value=0.047  Score=22.82  Aligned_cols=11  Identities=45%  Similarity=1.135  Sum_probs=8.7

Q ss_pred             eeeCCCCCccC
Q psy13147         95 ACYCPQGTIGN  105 (180)
Q Consensus        95 ~C~C~~g~~g~  105 (180)
                      .|.|++||+|.
T Consensus         1 ~C~C~~G~~G~   11 (13)
T PF12661_consen    1 TCQCPPGWTGP   11 (13)
T ss_dssp             EEEE-TTEETT
T ss_pred             CccCcCCCcCC
Confidence            48999999987

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=92.69  E-value=0.14  Score=39.47  Aligned_cols=32  Identities=31%  Similarity=0.623  Sum_probs=25.7

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      .++|.  ++.|.  ..|.++.|+|.|.|++||....
T Consensus       187 ~~~C~~~~~~c~--~~C~~~~g~~~c~c~~g~~~~~  220 (224)
T cd01475         187 PDLCATLSHVCQ--QVCISTPGSYLCACTEGYALLE  220 (224)
T ss_pred             chhhcCCCCCcc--ceEEcCCCCEEeECCCCccCCC
Confidence            48895  35564  5899999999999999998653

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=88.43  E-value=0.46  Score=32.32  Aligned_cols=32  Identities=22%  Similarity=0.544  Sum_probs=25.6

Q ss_pred             CCCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcC
Q psy13147         13 DSLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAP   47 (180)
Q Consensus        13 d~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g   47 (180)
                      +.|.|. ...|+.++.|.. ... ..|. |.+||..
T Consensus        76 p~d~Cd~y~~CG~~g~C~~-~~~-~~C~-Cl~GF~P  108 (110)
T PF00954_consen   76 PKDQCDVYGFCGPNGICNS-NNS-PKCS-CLPGFEP  108 (110)
T ss_pred             cccCCCCccccCCccEeCC-CCC-CceE-CCCCcCC
Confidence            567898 689999999954 334 6899 9999975

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=84.73  E-value=1.1  Score=30.46  Aligned_cols=32  Identities=34%  Similarity=0.949  Sum_probs=24.6

Q ss_pred             CCCCC-CCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        120 PNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       120 ~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      .|.|. ...|+..+.|.. .....|.|.+||..+
T Consensus        77 ~d~Cd~y~~CG~~g~C~~-~~~~~C~Cl~GF~P~  109 (110)
T PF00954_consen   77 KDQCDVYGFCGPNGICNS-NNSPKCSCLPGFEPK  109 (110)
T ss_pred             ccCCCCccccCCccEeCC-CCCCceECCCCcCCC
Confidence            37786 478999999954 455679999999753

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	180
1oig_A	24	The Solution Structure Of The Dpy Module From The D		2e-04

>pdb|1OIG|A Chain A, The Solution Structure Of The Dpy Module From The Dumpy Protein Length = 24

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 53 RPECLCNSDCPFNMACLGQKCRDP 76
          RPEC+ NSDCP N AC+ QKCRDP
Sbjct: 1  RPECVLNSDCPSNQACVNQKCRDP 24

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	180
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.87
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.82
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.79
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.72
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.71
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.7
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.68
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.59
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.59
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.56
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.45
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.43
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.42
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.4
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.37
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.29
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.28
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.27
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.26
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.23
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.21
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.2
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.19
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.18
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.17
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.17
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.12
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.1
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.06
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.04
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.03
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.02
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.02
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.01
2vh0_B	134	Activated factor XA light chain; serine protease,	99.0
2vh0_B	134	Activated factor XA light chain; serine protease,	98.98
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.98
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.95
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.94
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.94
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.93
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.91
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.91
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.83
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.8
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.73
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.64
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.63
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.58
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.57
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.56
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.48
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.48
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.47
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.45
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.44
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.4
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.32
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.29
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.16
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.15
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.14
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.13
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.12
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.07
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.99
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.93
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.91
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.91
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.88
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.83
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.81
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.81
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.8
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.78
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.78
1ob1_C	99	Major merozoite surface protein; immune system, im	97.73
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.69
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.69
1ob1_C	99	Major merozoite surface protein; immune system, im	97.65
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.59
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.57
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.55
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.51
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.38
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.37
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	96.97
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.94
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.87
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.85
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	96.82
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.77
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.66
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	96.57
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.54
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.52
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.33
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.32
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.3
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.17
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.14
1szb_A	170	Mannose binding lectin-associated serine protease-	95.97
1oig_A	26	Dumpy, CG33196-PB; structural protein; NMR {Drosop	95.95
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.93
1oig_A	26	Dumpy, CG33196-PB; structural protein; NMR {Drosop	95.91
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	95.83
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	95.81
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.54
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	95.53
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.48
2wph_E	59	Coagulation factor IXA light chain; serine proteas	95.45
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.24
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.24
1szb_A	170	Mannose binding lectin-associated serine protease-	95.02
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.0
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.88
2wph_E	59	Coagulation factor IXA light chain; serine proteas	94.42
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.29
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.2
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.64
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	93.63
1nzi_A	159	Complement C1S component; calcium, innate immunity	93.48
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	93.41
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	93.04
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	92.18
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	91.55
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	91.34
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	91.24
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	91.01
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	90.97
1nzi_A	159	Complement C1S component; calcium, innate immunity	90.91
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	90.41
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	90.16
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	90.04
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	89.43
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	89.28
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	89.14
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	89.1
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	88.07
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	87.99
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	87.31
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	86.62
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	86.34
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	85.71
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	84.64
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	82.6
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	82.15
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	80.56

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.87  E-value=4.4e-22  Score=141.49  Aligned_cols=127  Identities=21%  Similarity=0.378  Sum_probs=96.7

Q ss_pred             CCCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCc-cCCCCCCeE
Q psy13147         11 SNDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQ-GTCGVNALC   87 (180)
Q Consensus        11 ~~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~-~~C~~~~~C   87 (180)
                      ..|||+|.  ++||.++++|+++.++ |+|. |++||+|..  |.                  ..+++|. .+|..+++|
T Consensus         2 c~dideC~~~~~~C~~~g~C~~~~g~-~~C~-C~~Gy~G~~--C~------------------~~~~~C~~~~C~~~~~C   59 (135)
T 2vj3_A            2 AQDVDECSLGANPCEHAGKCINTLGS-FECQ-CLQGYTGPR--CE------------------IDVNECVSNPCQNDATC   59 (135)
T ss_dssp             -CCCCTTTSSSCSSSTTCEEEECSSS-EEEE-CCTTEESTT--SC------------------EECCTTTTCCCCSSCEE
T ss_pred             CcccccccCCCCCCCCCCEeECCCCC-EEEE-CCCCCcCCc--cc------------------ccCccCCCCCCCCCCEE
Confidence            46899998  7899999999999998 9999 999999853  21                  0124442 468888999


Q ss_pred             eecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccCCcCCCccCCcCC-CC
Q psy13147         88 TVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLN-TD  166 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~deC~~~-~~  166 (180)
                      +++.++|+|.|++||.|.   .|+.      .+++|...+|..+++|+++.++|+|.|++||.|.....-++||... +.
T Consensus        60 ~~~~g~~~C~C~~G~~G~---~C~~------~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~~~~~~  130 (135)
T 2vj3_A           60 LDQIGEFQCICMPGYEGV---HCEV------NTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKM  130 (135)
T ss_dssp             EECSSCEEEECCTTEESS---SSCE------ECCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEECC--------
T ss_pred             eCCCCCceeeCCCCCcCC---ccee------cCCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccCccccCCCcc
Confidence            999999999999999987   8863      2599988899999999999999999999999987432225788775 44


Q ss_pred             CC
Q psy13147        167 CP  168 (180)
Q Consensus       167 C~  168 (180)
                      |+
T Consensus       131 c~  132 (135)
T 2vj3_A          131 VW  132 (135)
T ss_dssp             --
T ss_pred             ee
Confidence            43

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.82  E-value=6.4e-20  Score=158.25  Aligned_cols=141  Identities=27%  Similarity=0.534  Sum_probs=107.7

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeec-CCCCCCCcCCCCCCC--CCCCCCCCCCCCCcccCCcccCCCccCCCCCC---
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMC-DPCSGPQAPWLPHCR--PECLCNSDCPFNMACLGQKCRDPCQGTCGVNA---   85 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C-~~C~~G~~g~~~~C~--~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~---   85 (180)
                      +||++|.++||.++++|+++.++.|+| . |++||+|++..|+  +||..+                  ...|..++   
T Consensus         1 ~DIDeC~~nPC~~gg~C~n~~~Gsy~C~~-C~~GytGdg~~CeDiDEC~~~------------------p~~C~~gg~~~   61 (634)
T 1yo8_A            1 ADPDGCLSNPCFPGAQCSSFPDGSWSCGF-CPVGFLGNGTHCEDLDECALV------------------PDICFSTSKVP   61 (634)
T ss_dssp             ---CGGGGCCSCTTCCEEECTTSCEEECC-CCTTBCSCSSSCCBCCTTTTS------------------CCCSCCCSSSC
T ss_pred             CcccccCCCCCCCCCEEecCCCCCeECCc-CCCccCCCCCCccccccccCC------------------CCcccCCcccc
Confidence            478999999999999999987533999 9 9999999877764  344321                  12377778   


Q ss_pred             eEeecCCCceee-CCCCCccCCC------------CCccCCCCCCCCCCCCCC--CCCCCCCeeeecC----CceeeecC
Q psy13147         86 LCTVVHHTPACY-CPQGTIGNPY------------EHCATPLAPVPPPNPCDH--VYCGSNAVCKHTN----GIVTCECL  146 (180)
Q Consensus        86 ~C~~~~g~~~C~-C~~g~~g~~~------------~~C~~~~~~~~~~d~C~~--~~C~~~~~C~~~~----g~~~C~C~  146 (180)
                      +|+++.++|+|. |++||+|...            ..|++       +++|..  ++|+.+++|+++.    ++|+|.|+
T Consensus        62 ~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d-------ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~  134 (634)
T 1yo8_A           62 RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP-------ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQ  134 (634)
T ss_dssp             CEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEE-------CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEEC
T ss_pred             ceeeccCceecccCCCCcccCccccccccccccCCCcccc-------cccccCCCcccccCccccccccccccceeeecc
Confidence            899999999999 9999998742            13776       499964  6999999999998    99999999


Q ss_pred             CCCccCCcCCC-----ccCCcCC-CCCCC--CCcccCCccc
Q psy13147        147 PTYYGNGALGC-----RPECVLN-TDCPN--SAACINNSII  179 (180)
Q Consensus       147 ~G~~g~~~~~C-----~deC~~~-~~C~~--~~~C~n~~~~  179 (180)
                      +||.|++. .|     ++||... +.|..  ...|.+-.|+
T Consensus       135 ~Gy~GdG~-~Ce~d~DiDeC~~~~~~C~~~~~y~C~~dnC~  174 (634)
T 1yo8_A          135 TGYAGDGL-ICGEDSDLDGWPNLNLVCATNATYHCIKDNCP  174 (634)
T ss_dssp             TTEEESSS-SEEECTTSSSSCSSCCTTTTTCSSSCSCCSST
T ss_pred             CCccccCc-ccccccCcccccCCCCcccCCCCccccccccc
Confidence            99999876 45     5689865 78863  3445544443

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.79  E-value=7.2e-19  Score=125.71  Aligned_cols=117  Identities=25%  Similarity=0.587  Sum_probs=89.6

Q ss_pred             CCCCCCCCCCCCeeeecC--CCeeecCCCCCCCcCCCCCCC--CCCCCC-CCCCCCCcccCCcccCCCc-cCCCCCCeEe
Q psy13147         15 LACKPNPCDPYSSCSVYS--EHVAMCDPCSGPQAPWLPHCR--PECLCN-SDCPFNMACLGQKCRDPCQ-GTCGVNALCT   88 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~--~~~~~C~~C~~G~~g~~~~C~--~~C~~~-~~C~~~~~C~~~~C~~~C~-~~C~~~~~C~   88 (180)
                      |+|.++||.++++|++..  ++ |+|. |++||+|..  |.  .++... ..|.         .+++|. .+|.++++|+
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~-~~C~-C~~G~~G~~--C~~~~~~~~~~~~c~---------~~~~C~~~~C~~~g~C~   67 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGS-FSCE-CPDGFTDPN--CSSVVEVASDEEEPT---------SAGPCTPNPCHNGGTCE   67 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----C-CEEE-CCTTCCTTT--TCSCCCCTTTTTSCC---------CCCTTSSCCCCTTCEEE
T ss_pred             CcCCCCcCCCCCEeeCCCCCCC-EEeE-CCCCCCCCC--CccCccccccccccc---------cCCcCCCCCCCCCCEec
Confidence            578899999999999875  46 9999 999999764  32  122111 1111         135663 4798999999


Q ss_pred             -------ecCCCceeeCCCCCccCCCCCcc-CCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccCCc
Q psy13147         89 -------VVHHTPACYCPQGTIGNPYEHCA-TPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGA  154 (180)
Q Consensus        89 -------~~~g~~~C~C~~g~~g~~~~~C~-~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  154 (180)
                             ++.++|+|.|++||.|.   .|+ +       +++|...+|..+++|+++.++|+|.|++||+|+..
T Consensus        68 ~~~~~~~~~~~~~~C~C~~G~~G~---~C~~~-------i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c  131 (143)
T 4d90_A           68 ISEAYRGDTFIGYVCKCPRGFNGI---HCQHN-------INECEVEPCKNGGICTDLVANYSCECPGEFMGRNC  131 (143)
T ss_dssp             ECCCEETTEECCEEEECCTTEEST---TSCEE-------CCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTS
T ss_pred             CCCccccCCCCCeEeECcCCCcCC---CcccC-------CCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCc
Confidence                   56689999999999988   897 5       59999899999999999999999999999999754

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.72  E-value=8.2e-19  Score=130.85  Aligned_cols=124  Identities=21%  Similarity=0.484  Sum_probs=98.8

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCC-CCCCCCCCCCCCCCCCCCcccCCcccCCCc-----cCCCCCCeEeecC-
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW-LPHCRPECLCNSDCPFNMACLGQKCRDPCQ-----GTCGVNALCTVVH-   91 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~-~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~-----~~C~~~~~C~~~~-   91 (180)
                      ++||. +++|+++.++ |+|. |++||+|. +..|++                   +++|.     .+|..+++|+++. 
T Consensus        10 ~~pC~-ng~C~~~~g~-~~C~-C~~G~~g~~~~~C~~-------------------id~C~~~~~~~~C~~~~~C~~~~~   67 (186)
T 1z1y_A           10 DTICX-NGQLVQMSNH-FXCM-CNEGLVHLSENTCEE-------------------XNECXXETLGXACGEFGQCIENPD   67 (186)
T ss_dssp             TCCCB-TEEEEECSSC-EEEE-ECTTEEEEETTEEEE-------------------CCCCSGGGTTSEEETTEEEEECSS
T ss_pred             CCCCC-CCEeECCCCC-eEeE-CCCCCccCCCCccCC-------------------CCcccCCCCCCCCCCCCEeecCCC
Confidence            68998 5699999998 9999 99999985 234431                   13332     3577889999998 


Q ss_pred             ----CCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeee----ecCCceeeecCCCCcc---CCcCCCc--
Q psy13147         92 ----HTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCK----HTNGIVTCECLPTYYG---NGALGCR--  158 (180)
Q Consensus        92 ----g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~----~~~g~~~C~C~~G~~g---~~~~~C~--  158 (180)
                          ++|+|.|++||+|... .|+        +++|...+|.+++.|+    ++.++|+|.|++||+|   ++. .|.  
T Consensus        68 ~~~~g~y~C~C~~G~~g~~~-~C~--------~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~-~C~~~  137 (186)
T 1z1y_A           68 PAQVNMYXCGCIEGYTLXED-TCV--------LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEX-XCTXT  137 (186)
T ss_dssp             TTSSCSEEEEECTTEEEETT-EEE--------EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTT-EEEEE
T ss_pred             CcCCCCEECCCCCCCccCCC-CCC--------CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCC-cceEc
Confidence                8999999999999754 454        3889888999899999    8889999999999999   434 462  


Q ss_pred             --cCCcCCCCC-CCCCcccCC
Q psy13147        159 --PECVLNTDC-PNSAACINN  176 (180)
Q Consensus       159 --deC~~~~~C-~~~~~C~n~  176 (180)
                        +||..  +| ..+++|+|+
T Consensus       138 ~~~~C~~--~C~~~~~~C~n~  156 (186)
T 1z1y_A          138 GETACQL--XCNTDNEVCXNV  156 (186)
T ss_dssp             ECCCCCC--CCCTTTEEEEEE
T ss_pred             CCCcccc--cccccCcceecC
Confidence              57874  89 888899875

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.71  E-value=1.1e-18  Score=130.27  Aligned_cols=114  Identities=19%  Similarity=0.551  Sum_probs=93.3

Q ss_pred             CCCCCCCC----CCCCCCCCeeeecC-----CCeeecCCCCCCCcCCCCCCC-CCCCCCCCCCCCCcccCCcccCCCccC
Q psy13147         11 SNDSLACK----PNPCDPYSSCSVYS-----EHVAMCDPCSGPQAPWLPHCR-PECLCNSDCPFNMACLGQKCRDPCQGT   80 (180)
Q Consensus        11 ~~d~~~C~----~~~C~~~~~C~~~~-----~~~~~C~~C~~G~~g~~~~C~-~~C~~~~~C~~~~~C~~~~C~~~C~~~   80 (180)
                      ++|+|+|.    .++|.++++|+++.     ++ |+|. |++||+|....|. ++|..                    .+
T Consensus        41 C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~-y~C~-C~~G~~g~~~~C~~d~C~~--------------------~~   98 (186)
T 1z1y_A           41 CEEXNECXXETLGXACGEFGQCIENPDPAQVNM-YXCG-CIEGYTLXEDTCVLDVCQY--------------------XN   98 (186)
T ss_dssp             EEECCCCSGGGTTSEEETTEEEEECSSTTSSCS-EEEE-ECTTEEEETTEEEEGGGTT--------------------CC
T ss_pred             cCCCCcccCCCCCCCCCCCCEeecCCCCcCCCC-EECC-CCCCCccCCCCCCCCcCcC--------------------CC
Confidence            45889998    78999999999998     67 9999 9999999764442 33322                    35


Q ss_pred             CCCCCeEe----ecCCCceeeCCCCCcc---CCCCCccCCCCCCCC-CCCCCCCCC-CCCCeeeecCCceeeecCCCCcc
Q psy13147         81 CGVNALCT----VVHHTPACYCPQGTIG---NPYEHCATPLAPVPP-PNPCDHVYC-GSNAVCKHTNGIVTCECLPTYYG  151 (180)
Q Consensus        81 C~~~~~C~----~~~g~~~C~C~~g~~g---~~~~~C~~~~~~~~~-~d~C~~~~C-~~~~~C~~~~g~~~C~C~~G~~g  151 (180)
                      |.++++|+    ++.++|+|.|++||+|   ++. .|++      + +++|. .+| ..++.|+++.++|+|.|++||+|
T Consensus        99 C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~-~C~~------~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~g  170 (186)
T 1z1y_A           99 CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEX-XCTX------TGETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFTF  170 (186)
T ss_dssp             CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTT-EEEE------EECCCCC-CCCCTTTEEEEEETTEEEEEECTTCEE
T ss_pred             CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCC-cceE------cCCCccc-ccccccCcceecCCCCeeeECCCCCcc
Confidence            77788998    7778999999999999   333 7876      3 48897 489 88999999999999999999998


Q ss_pred             CCc
Q psy13147        152 NGA  154 (180)
Q Consensus       152 ~~~  154 (180)
                      +..
T Consensus       171 ~~~  173 (186)
T 1z1y_A          171 DXE  173 (186)
T ss_dssp             ETT
T ss_pred             Ccc
Confidence            754

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.70  E-value=1.1e-17  Score=119.64  Aligned_cols=104  Identities=24%  Similarity=0.537  Sum_probs=84.1

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCCC-------CCCCCCCCCCCCCCCCCcccCCcccCCCcc----CCCCCCeE
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL-------PHCRPECLCNSDCPFNMACLGQKCRDPCQG----TCGVNALC   87 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~-------~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~----~C~~~~~C   87 (180)
                      +++|.++++|++   . |+|. |++||+|..       ..|+                   .+++|..    +|..+++|
T Consensus         6 ~~~C~~~~~C~~---~-~~C~-C~~G~~g~~~~~~~~~~~C~-------------------dideC~~~~~~~C~~~~~C   61 (143)
T 2bou_A            6 ARWCPQDSSCVN---A-TACR-CNPGFSSFSEIITTPMETCD-------------------DINECATLSKVSCGKFSDC   61 (143)
T ss_dssp             CTTCCTTEEESS---S-SCEE-ECTTEECSSSSBCSTTCCCE-------------------ECCGGGC----CCCTTEEE
T ss_pred             cCcCCCCCEEcC---C-CEEe-CCCCCcCccccccCCCCcCC-------------------ccccccCCCCCCCCCCCEE
Confidence            368999999986   3 8999 999999853       2231                   1355531    68888999


Q ss_pred             eecCCCceeeCCCCCccCC---------CCCccCCCCCCCCCCCCC--CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         88 TVVHHTPACYCPQGTIGNP---------YEHCATPLAPVPPPNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~---------~~~C~~~~~~~~~~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +++.++|+|.|++||+|..         ...|++      + |||.  .++|..++.|+++.++|+|.|++||+|..
T Consensus        62 ~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~d------i-deC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~  131 (143)
T 2bou_A           62 WNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQD------V-DECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH  131 (143)
T ss_dssp             EECSSCEEEEECTTEEETTCCSCBSSGGGCCEEE------C-CHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCT
T ss_pred             EcCCCCeEeECCCCcccCcCccccccCCCCCcCC------c-cCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCC
Confidence            9999999999999999873         126777      4 9995  48999999999999999999999999874

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.68  E-value=5e-18  Score=117.86  Aligned_cols=108  Identities=26%  Similarity=0.586  Sum_probs=83.0

Q ss_pred             CCCCCCCCCCCCCCCeeeec-CCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCC-ccCCCCCCeEee
Q psy13147         12 NDSLACKPNPCDPYSSCSVY-SEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPC-QGTCGVNALCTV   89 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~-~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C-~~~C~~~~~C~~   89 (180)
                      +|||+|.++||.  ++|+++ .++ |+|. |++||+|.... .++|.                 ++| ..+|.  ++|++
T Consensus         2 ~dideC~~~pC~--~~C~~~~~g~-y~C~-C~~Gy~g~~~~-~~~C~-----------------~~C~~~~C~--~~C~~   57 (118)
T 1dx5_I            2 EPVDPCFRANCE--YQCQPLDQTS-YLCV-CAEGFAPIPHE-PHRCQ-----------------MFCNQTACP--ADCDP   57 (118)
T ss_dssp             CCCCGGGGCCCS--SEEEECSSSC-EEEE-CCTTEEEETTE-EEEEE-----------------ECCCSSEEE--CEECT
T ss_pred             CccccCCCCCCC--CCCCCCCCCC-EEeE-CCCCccccCCC-CCccc-----------------cccCCCCCC--CcccC
Confidence            589999999997  399999 888 9999 99999986410 11222                 122 12343  67877


Q ss_pred             cCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCC-CCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         90 VHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDH-VYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        90 ~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                       .++|+|.|++||++.....|++       +|||.. ++|  ++.|+++.++|+|.|++||+|++
T Consensus        58 -~~~y~C~C~~Gy~~~~g~~C~d-------ideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~  112 (118)
T 1dx5_I           58 -NTQASCECPEGYILDDGFICTD-------IDECENGGFC--SGVCHNLPGTFECICGPDSALAG  112 (118)
T ss_dssp             -TSTTCEECCTTEEEETTTEEEE-------CCHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred             -CCCeEeECCCCccCCCCCcccc-------ccccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence             4899999999999543228987       499975 889  68999999999999999998754

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.59  E-value=2.4e-17  Score=118.48  Aligned_cols=123  Identities=19%  Similarity=0.441  Sum_probs=79.8

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCC--CCCCCCCCCCCCCCCCCcccCCccc---CCCccCCCCCCe
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL--PHCRPECLCNSDCPFNMACLGQKCR---DPCQGTCGVNAL   86 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~--~~C~~~C~~~~~C~~~~~C~~~~C~---~~C~~~C~~~~~   86 (180)
                      +|||+|+++||. +++|+++.++ |+|. |++||+|+.  ..|++.  ....|....  ....|.   ++|    ..++.
T Consensus         2 ~dideC~~~pC~-ng~C~n~~g~-y~C~-C~~G~~g~~~~~~C~~~--~~~~C~~~~--~g~~C~~~~~~c----~~~~~   70 (147)
T 2w86_A            2 ADIDECESSPCI-NGVCKNSPGS-FICE-CSSESTLDPTKTICIET--IKGTCWQTV--IDGRCEININGA----TLKSQ   70 (147)
T ss_dssp             CCCCGGGGCCSB-TSEEEEETTE-EEEE-CCTTEEECTTSSBEEEC--CCEEEEEEE--ETTEEEEEEEEE----ECHHH
T ss_pred             CcCccCcCCCCC-CCEeECCCCC-EEeE-CCCCcccCCCCCeecCC--CCCcccCCC--CCCccccCCCcc----ccCCc
Confidence            689999999997 5899999998 9999 999999864  234320  000010000  001111   111    11111


Q ss_pred             EeecCC----------CceeeCCCCCccCCCCCccCCCCCCCCCCCCC--CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         87 CTVVHH----------TPACYCPQGTIGNPYEHCATPLAPVPPPNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        87 C~~~~g----------~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      |.+..+          .|.|.|++||++.....|++      | |||.  +.+|. +++|+++.++|+|.|++||.|+.
T Consensus        71 C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~d------i-deC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           71 CCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCED------I-DECEVFPGVCK-NGLCVNTRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             HHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEE------C-CHHHHSTTCSS-SSEEEEETTEEEEECCTTCCBCT
T ss_pred             cccCcCcccCCCcccCCCcccCCCccccCCCCccCc------c-ccccCCCCCCC-CCEEECCCCCEEeeCCCCCccCC
Confidence            222222          37889999997421128988      4 9996  46697 46999999999999999999874

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.59  E-value=3.8e-15  Score=105.53  Aligned_cols=93  Identities=27%  Similarity=0.610  Sum_probs=78.2

Q ss_pred             cCCCc---cCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCc
Q psy13147         74 RDPCQ---GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYY  150 (180)
Q Consensus        74 ~~~C~---~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  150 (180)
                      +|||.   .+|..+++|+++.++|+|.|++||+|.   .|+.      .+++|...+|..+++|+++.++|+|.|++||.
T Consensus         5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~---~C~~------~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~   75 (135)
T 2vj3_A            5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP---RCEI------DVNECVSNPCQNDATCLDQIGEFQCICMPGYE   75 (135)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST---TSCE------ECCTTTTCCCCSSCEEEECSSCEEEECCTTEE
T ss_pred             cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC---cccc------cCccCCCCCCCCCCEEeCCCCCceeeCCCCCc
Confidence            35663   479889999999999999999999998   7863      25999889999999999999999999999999


Q ss_pred             cCCcCCCccCCcCCCCCCCCCcccCC
Q psy13147        151 GNGALGCRPECVLNTDCPNSAACINN  176 (180)
Q Consensus       151 g~~~~~C~deC~~~~~C~~~~~C~n~  176 (180)
                      |.....-+++|.. ++|..+++|+++
T Consensus        76 G~~C~~~~~~C~~-~~C~~~g~C~~~  100 (135)
T 2vj3_A           76 GVHCEVNTDECAS-SPCLHNGRCLDK  100 (135)
T ss_dssp             SSSSCEECCTTTT-CCSTTTCEEEEC
T ss_pred             CCcceecCCcccC-CCcCCCCEeECC
Confidence            8743222579987 689988999875

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.56  E-value=3.2e-16  Score=114.34  Aligned_cols=126  Identities=25%  Similarity=0.517  Sum_probs=78.7

Q ss_pred             CCCCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcCC--CCCCC--CC--CCCCC-CC--CCCCcccC--------Ccc
Q psy13147         12 NDSLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW--LPHCR--PE--CLCNS-DC--PFNMACLG--------QKC   73 (180)
Q Consensus        12 ~d~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~--~~~C~--~~--C~~~~-~C--~~~~~C~~--------~~C   73 (180)
                      +|||||+ ++||. +++|+++.++ |+|. |++||++.  +..|+  ++  |.... .|  ..+..|++        ++|
T Consensus         1 ~dideC~~~~~C~-~~~C~n~~gs-y~C~-C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C   77 (162)
T 1uzk_A            1 TDVNECLDPTTCI-SGNCVNTPGS-YICD-CPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC   77 (162)
T ss_dssp             CCCCGGGSTTSSB-TSEEEEETTE-EEEE-CCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred             CccccCCCCCCCC-CCEeECCCCC-EEEe-CCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence            4899998 58997 7999999998 9999 99999975  45564  22  43211 01  01112211        111


Q ss_pred             cCCCc------cCCCCCCeEee-cCCCceeeCCC--CCccCCC-CCccCCCCCCCCCCCCC--CCCCCCCCeeeecCCce
Q psy13147         74 RDPCQ------GTCGVNALCTV-VHHTPACYCPQ--GTIGNPY-EHCATPLAPVPPPNPCD--HVYCGSNAVCKHTNGIV  141 (180)
Q Consensus        74 ~~~C~------~~C~~~~~C~~-~~g~~~C~C~~--g~~g~~~-~~C~~~~~~~~~~d~C~--~~~C~~~~~C~~~~g~~  141 (180)
                      .  |.      .+|.   +|.. ..++|+|.|++  ||++... ..|++       +|||.  +.+|. +++|+++.++|
T Consensus        78 ~--C~~G~~~~~~C~---~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~d-------ideC~~~~~~C~-~g~C~n~~gsy  144 (162)
T 1uzk_A           78 C--CSLGKAWGTPCE---MCPAVNTSEYKILCPGGEGFRPNPITVILED-------IDECQELPGLCQ-GGKCINTFGSF  144 (162)
T ss_dssp             H--TTTCCEETTTTE---ECCCTTSHHHHHHCTTCTTEEECTTTCCEEE-------CCHHHHCGGGGB-TSEEEECSSCE
T ss_pred             e--CCCCCCcCCCcc---cCCCCCCCCceeECCCCCCcccCCCCCccCc-------cccccCCCCCcC-CCEeEcCCCCE
Confidence            0  00      0111   1221 23456666665  6666542 24666       49995  35797 47999999999


Q ss_pred             eeecCCCCccCC
Q psy13147        142 TCECLPTYYGNG  153 (180)
Q Consensus       142 ~C~C~~G~~g~~  153 (180)
                      +|.|++||+|+.
T Consensus       145 ~C~C~~Gy~g~~  156 (162)
T 1uzk_A          145 QCRCPTGYYLNE  156 (162)
T ss_dssp             EEECCTTCCBCT
T ss_pred             EeeCCCCccCCC
Confidence            999999999864

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.45  E-value=1.2e-13  Score=98.40  Aligned_cols=96  Identities=23%  Similarity=0.564  Sum_probs=71.4

Q ss_pred             CC-ccCCCCCCeEeecC--CCceeeCCCCCccCCCCCccCCC-------CCCCCCCCCCCCCCCCCCeee-------ecC
Q psy13147         76 PC-QGTCGVNALCTVVH--HTPACYCPQGTIGNPYEHCATPL-------APVPPPNPCDHVYCGSNAVCK-------HTN  138 (180)
Q Consensus        76 ~C-~~~C~~~~~C~~~~--g~~~C~C~~g~~g~~~~~C~~~~-------~~~~~~d~C~~~~C~~~~~C~-------~~~  138 (180)
                      +| ..+|.++++|++..  ++|+|.|++||+|.   .|+...       ...+ +++|...+|.+++.|+       ++.
T Consensus         2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~---~C~~~~~~~~~~~~c~~-~~~C~~~~C~~~g~C~~~~~~~~~~~   77 (143)
T 4d90_A            2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDP---NCSSVVEVASDEEEPTS-AGPCTPNPCHNGGTCEISEAYRGDTF   77 (143)
T ss_dssp             -CCSCCCGGGCEEEC-----CCEEECCTTCCTT---TTCSCCCCTTTTTSCCC-CCTTSSCCCCTTCEEEECCCEETTEE
T ss_pred             cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCC---CCccCcccccccccccc-CCcCCCCCCCCCCEecCCCccccCCC
Confidence            45 34788889999865  68999999999987   554311       0111 3788888999999999       777


Q ss_pred             CceeeecCCCCccCCcCCCccCCcCCCCCCCCCcccCC
Q psy13147        139 GIVTCECLPTYYGNGALGCRPECVLNTDCPNSAACINN  176 (180)
Q Consensus       139 g~~~C~C~~G~~g~~~~~C~deC~~~~~C~~~~~C~n~  176 (180)
                      ++|+|.|++||.|.....-++||.. ++|..+++|+|+
T Consensus        78 ~~~~C~C~~G~~G~~C~~~i~~C~~-~~C~~~~~C~~~  114 (143)
T 4d90_A           78 IGYVCKCPRGFNGIHCQHNINECEV-EPCKNGGICTDL  114 (143)
T ss_dssp             CCEEEECCTTEESTTSCEECCTTTT-CCSCTTCEEEEE
T ss_pred             CCeEeECcCCCcCCCcccCCCcCCC-CCCCCCCEeECC
Confidence            8999999999988744223679986 689999999886

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.43  E-value=4.1e-14  Score=100.99  Aligned_cols=90  Identities=30%  Similarity=0.670  Sum_probs=72.7

Q ss_pred             CccCCCCCCeEeecCCCceeeCCCCCccCC------CCCccCCCCCCCCCCCCCCC---CCCCCCeeeecCCceeeecCC
Q psy13147         77 CQGTCGVNALCTVVHHTPACYCPQGTIGNP------YEHCATPLAPVPPPNPCDHV---YCGSNAVCKHTNGIVTCECLP  147 (180)
Q Consensus        77 C~~~C~~~~~C~~~~g~~~C~C~~g~~g~~------~~~C~~~~~~~~~~d~C~~~---~C~~~~~C~~~~g~~~C~C~~  147 (180)
                      |..+|..+++|++.   |+|.|++||+|..      ...|++       +|+|...   +|..++.|+++.++|+|.|++
T Consensus         5 C~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~d-------ideC~~~~~~~C~~~~~C~n~~g~y~C~C~~   74 (143)
T 2bou_A            5 CARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDD-------INECATLSKVSCGKFSDCWNTEGSYDCVCSP   74 (143)
T ss_dssp             CCTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEE-------CCGGGC----CCCTTEEEEECSSCEEEEECT
T ss_pred             CcCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCc-------cccccCCCCCCCCCCCEEEcCCCCeEeECCC
Confidence            44578888999874   8999999999852      237877       4999753   899899999999999999999


Q ss_pred             CCccCCc---------CCC--ccCCcCC-CCCCCCCcccCC
Q psy13147        148 TYYGNGA---------LGC--RPECVLN-TDCPNSAACINN  176 (180)
Q Consensus       148 G~~g~~~---------~~C--~deC~~~-~~C~~~~~C~n~  176 (180)
                      ||+|...         ..|  +|||... ++|.++++|+|+
T Consensus        75 Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~  115 (143)
T 2bou_A           75 GYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT  115 (143)
T ss_dssp             TEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEEC
T ss_pred             CcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECC
Confidence            9998731         145  5799975 899989999986

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.42  E-value=2.5e-13  Score=117.38  Aligned_cols=96  Identities=32%  Similarity=0.706  Sum_probs=79.7

Q ss_pred             cCCC-ccCCCCCCeEeecCC-Ccee-eCCCCCccCCCCCccCCCCCCCCCCCCCCCC--CCCCC---eeeecCCceeee-
Q psy13147         74 RDPC-QGTCGVNALCTVVHH-TPAC-YCPQGTIGNPYEHCATPLAPVPPPNPCDHVY--CGSNA---VCKHTNGIVTCE-  144 (180)
Q Consensus        74 ~~~C-~~~C~~~~~C~~~~g-~~~C-~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~--C~~~~---~C~~~~g~~~C~-  144 (180)
                      +++| ..+|.++++|+++.+ +|+| .|++||+|.+. .|++      + +||...+  |..++   +|+++.++|+|. 
T Consensus         3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~-~CeD------i-DEC~~~p~~C~~gg~~~~CvNt~gsY~C~~   74 (634)
T 1yo8_A            3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT-HCED------L-DECALVPDICFSTSKVPRCVNTQPGFHCLP   74 (634)
T ss_dssp             -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS-SCCB------C-CTTTTSCCCSCCCSSSCCEEECSSSEEECC
T ss_pred             ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC-Cccc------c-ccccCCCCcccCCccccceeeccCceeccc
Confidence            3566 358999999999985 4999 99999998766 8987      4 9997656  99888   999999999999 


Q ss_pred             cCCCCccCCcC------------CC--ccCCcCC-CCCCCCCcccCCc
Q psy13147        145 CLPTYYGNGAL------------GC--RPECVLN-TDCPNSAACINNS  177 (180)
Q Consensus       145 C~~G~~g~~~~------------~C--~deC~~~-~~C~~~~~C~n~~  177 (180)
                      |++||.|....            .|  ++||... ++|+++++|+|+.
T Consensus        75 C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~  122 (634)
T 1yo8_A           75 CPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLG  122 (634)
T ss_dssp             CCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECC
T ss_pred             CCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccc
Confidence            99999987632            36  5799986 8999999998864

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.40  E-value=3.2e-13  Score=87.55  Aligned_cols=74  Identities=26%  Similarity=0.494  Sum_probs=58.8

Q ss_pred             CCCCCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC--CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeE
Q psy13147         11 SNDSLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR--PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALC   87 (180)
Q Consensus        11 ~~d~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~--~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C   87 (180)
                      ++|||+|. +++|. +++|+++.++ |+|. |++||++++..|+  +||..                   ..+|.+ ++|
T Consensus         2 C~dideC~~~~~C~-~g~C~n~~g~-y~C~-C~~Gy~~~g~~C~dideC~~-------------------~~~C~~-~~C   58 (82)
T 1emn_A            2 AVDMDECKEPDVCK-HGQCINTDGS-YRCE-CPFGYILAGNECVDTDECSV-------------------GNPCGN-GTC   58 (82)
T ss_dssp             CCCCCSSSSTTSCS-SSEECCCSSC-CCEE-CCTTEEEETTEEEECCGGGT-------------------CCTTSS-SCE
T ss_pred             CCccccCCCCCCcC-CCEEEecCCC-EEEE-CCCCeECCCCccCCcccccC-------------------CCCCCC-CEe
Confidence            57999998 48997 5899999998 9999 9999997665553  33321                   135653 699


Q ss_pred             eecCCCceeeCCCCCccCCC
Q psy13147         88 TVVHHTPACYCPQGTIGNPY  107 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~~  107 (180)
                      +++.++|+|.|++||.|++.
T Consensus        59 ~n~~g~y~C~C~~G~~g~~~   78 (82)
T 1emn_A           59 KNVIGGFECTCEEGFEPGPM   78 (82)
T ss_dssp             EECSSSEEECCSSSSCCCSS
T ss_pred             ECCCCCEEeECCCCeEeCCC
Confidence            99999999999999998754

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.37  E-value=6.2e-13  Score=86.15  Aligned_cols=70  Identities=26%  Similarity=0.623  Sum_probs=58.3

Q ss_pred             CCCc--cCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-CCCCCCCCeeeecCCceeeecCCCCcc
Q psy13147         75 DPCQ--GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYG  151 (180)
Q Consensus        75 ~~C~--~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g  151 (180)
                      |+|.  .+|. +++|+++.++|+|.|++||++++. .|++      + |+|. .++|.+ +.|+++.++|+|.|++||.|
T Consensus         6 deC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~g~-~C~d------i-deC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g   75 (82)
T 1emn_A            6 DECKEPDVCK-HGQCINTDGSYRCECPFGYILAGN-ECVD------T-DECSVGNPCGN-GTCKNVIGGFECTCEEGFEP   75 (82)
T ss_dssp             CSSSSTTSCS-SSEECCCSSCCCEECCTTEEEETT-EEEE------C-CGGGTCCTTSS-SCEEECSSSEEECCSSSSCC
T ss_pred             ccCCCCCCcC-CCEEEecCCCEEEECCCCeECCCC-ccCC------c-ccccCCCCCCC-CEeECCCCCEEeECCCCeEe
Confidence            5553  4675 489999999999999999985443 8987      4 9996 688974 69999999999999999998


Q ss_pred             CCc
Q psy13147        152 NGA  154 (180)
Q Consensus       152 ~~~  154 (180)
                      ++.
T Consensus        76 ~~~   78 (82)
T 1emn_A           76 GPM   78 (82)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            754

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.29  E-value=2.4e-12  Score=84.04  Aligned_cols=72  Identities=25%  Similarity=0.606  Sum_probs=55.5

Q ss_pred             CCCCCCCCCC--CCCCCeeeecCCCeeecCCCCCCCcCC---CCCCCCCCCCCCCCCCCCcccCCcccCCCc-c--CCCC
Q psy13147         12 NDSLACKPNP--CDPYSSCSVYSEHVAMCDPCSGPQAPW---LPHCRPECLCNSDCPFNMACLGQKCRDPCQ-G--TCGV   83 (180)
Q Consensus        12 ~d~~~C~~~~--C~~~~~C~~~~~~~~~C~~C~~G~~g~---~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~-~--~C~~   83 (180)
                      +|||||..++  |. +++|+++.++ |+|. |++||++.   +..|++                   +|||. .  .|. 
T Consensus         1 ~dideC~~~~~~C~-~g~C~n~~g~-y~C~-C~~Gy~~~~~~g~~C~d-------------------ideC~~~~~~C~-   57 (86)
T 1lmj_A            1 TDIDECRISPDLCG-RGQCVNTPGD-FECK-CDEGYESGFMMMKNCMD-------------------IDECQRDPLLCR-   57 (86)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTE-EEEC-CCSSEEECTTTSSSEEE-------------------CCHHHHCSSTTT-
T ss_pred             CccccccCCCCCCC-CCEEECCCCC-EEee-CCCCcCccCCCCCccCC-------------------cccccCCCCcCC-
Confidence            4899998544  96 5699999998 9999 99999864   333421                   24442 2  364 


Q ss_pred             CCeEeecCCCceeeCCCCCccCC
Q psy13147         84 NALCTVVHHTPACYCPQGTIGNP  106 (180)
Q Consensus        84 ~~~C~~~~g~~~C~C~~g~~g~~  106 (180)
                      +++|+++.++|+|.|++||++..
T Consensus        58 ~~~C~n~~g~y~C~C~~G~~~~~   80 (86)
T 1lmj_A           58 GGVCHNTEGSYRCECPPGHQLSP   80 (86)
T ss_dssp             TSEEEEETTEEEEESCTTSCCCS
T ss_pred             CCEeEcCCCCEEEECcCCcccCC
Confidence            58999999999999999998864

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.28  E-value=4.6e-12  Score=83.64  Aligned_cols=77  Identities=14%  Similarity=0.447  Sum_probs=60.2

Q ss_pred             eecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCC-ccCCCCCCeEeecCCCceeeCCCCCccCCCCCcc--C
Q psy13147         36 AMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPC-QGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCA--T  112 (180)
Q Consensus        36 ~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C-~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~--~  112 (180)
                      |+|. |.+||+|..  |.                    +++| .++      |++..++|+|.|++||+     .|+  +
T Consensus         2 y~C~-C~~g~~g~~--c~--------------------~~~c~~~p------C~n~~~~y~C~C~~G~~-----~C~~~~   47 (91)
T 1tpg_A            2 YQVI-CRDEKTQMI--YQ--------------------QHQSWLRP------VLRSNRVEYCWCNSGRA-----QCHSVP   47 (91)
T ss_dssp             CCCC-CBCSSSCCB--CC--------------------SSCEEEEE------CSSSSCEEEEECSSSCC-----BCCEEC
T ss_pred             eeeE-CCCCCcCCe--EC--------------------CCcccCCc------cccCCCCcEeECCCCCc-----ccccCc
Confidence            8999 999998842  11                    1333 123      34557899999999996     575  4


Q ss_pred             CCCCCCCCCCCCCCCCCCCCeeeecC--CceeeecCCCCccCC
Q psy13147        113 PLAPVPPPNPCDHVYCGSNAVCKHTN--GIVTCECLPTYYGNG  153 (180)
Q Consensus       113 ~~~~~~~~d~C~~~~C~~~~~C~~~~--g~~~C~C~~G~~g~~  153 (180)
                             +++|.++||.+++.|++..  ++|+|.|++||.|..
T Consensus        48 -------~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   83 (91)
T 1tpg_A           48 -------VKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKS   83 (91)
T ss_dssp             -------EEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSS
T ss_pred             -------CCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCc
Confidence                   4899889999999999987  999999999998863

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.27  E-value=3.2e-15  Score=116.31  Aligned_cols=133  Identities=5%  Similarity=-0.144  Sum_probs=91.5

Q ss_pred             CCCCCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCC-CCCCC-----CCCCCCCCCcccCC----cccCCCc
Q psy13147          9 YPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHC-RPECL-----CNSDCPFNMACLGQ----KCRDPCQ   78 (180)
Q Consensus         9 ~~~~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C-~~~C~-----~~~~C~~~~~C~~~----~C~~~C~   78 (180)
                      ..+.++++|.+.||.++++|++...+ |+|. |+.||+|..-.- +++|.     ....|.+...|+.+    ..++.+.
T Consensus        94 ~~c~~~~eC~s~pC~ngG~C~~~~~s-y~C~-C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~  171 (267)
T 4fbr_A           94 ARDKQNIVAVSIKSNDGGKTLTGTTT-YNGE-GPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVD  171 (267)
T ss_dssp             CCSSCCEEEEEEECSSTTSEEEEEEE-ETTS-CCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEE
T ss_pred             CccccccccCCCCCCCCCEEecCCcc-EEee-CCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCC
Confidence            34455678999999999999999888 9999 999999864111 13322     22334444444331    1222224


Q ss_pred             cCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-----------------------------CCCCC
Q psy13147         79 GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-----------------------------HVYCG  129 (180)
Q Consensus        79 ~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-----------------------------~~~C~  129 (180)
                      .+|.++++|++..++|+|.|++||+|.   .|+.      ++++|.                             ..+|.
T Consensus       172 ~~c~ngg~C~dg~~~y~C~Cp~Gf~G~---~c~~------~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~  242 (267)
T 4fbr_A          172 AKSNDGGKTLSGTMTYNGEGPIGFRGT---LTSP------DTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASS  242 (267)
T ss_dssp             EECSSTTSEEEEEEEETTSCCEEEEEE---EEET------TEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECS
T ss_pred             CCCCCCCEeeCCCCCeEEeCCCCcccc---cccc------ccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCC
Confidence            579999999999999999999999987   6655      334421                             11566


Q ss_pred             CCCeeeecCCceeeecCCCCccC
Q psy13147        130 SNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       130 ~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      .+++|++...+|.|.|++||+|.
T Consensus       243 ngGtC~dg~~sy~CeCp~GF~G~  265 (267)
T 4fbr_A          243 DGGKTLAGTMIYNGEGPIGFRAR  265 (267)
T ss_dssp             STTSEEEEEEEETTSCCEEEEEE
T ss_pred             CCCEeeCCCcceeecCCCCcccc
Confidence            67777777777888888888763

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.26  E-value=2.2e-12  Score=84.27  Aligned_cols=71  Identities=27%  Similarity=0.615  Sum_probs=56.1

Q ss_pred             cCCCc-c--CCCCCCeEeecCCCceeeCCCCCccCC--CCCccCCCCCCCCCCCCCCCC--CCCCCeeeecCCceeeecC
Q psy13147         74 RDPCQ-G--TCGVNALCTVVHHTPACYCPQGTIGNP--YEHCATPLAPVPPPNPCDHVY--CGSNAVCKHTNGIVTCECL  146 (180)
Q Consensus        74 ~~~C~-~--~C~~~~~C~~~~g~~~C~C~~g~~g~~--~~~C~~~~~~~~~~d~C~~~~--C~~~~~C~~~~g~~~C~C~  146 (180)
                      +|||. .  .|. +++|+++.++|+|.|++||++..  ...|++      | |||...+  |. ++.|+++.|+|+|.|+
T Consensus         3 ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~d------i-deC~~~~~~C~-~~~C~n~~g~y~C~C~   73 (86)
T 1lmj_A            3 IDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMD------I-DECQRDPLLCR-GGVCHNTEGSYRCECP   73 (86)
T ss_dssp             CCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEE------C-CHHHHCSSTTT-TSEEEEETTEEEEESC
T ss_pred             cccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCC------c-ccccCCCCcCC-CCEeEcCCCCEEEECc
Confidence            35563 2  375 46999999999999999998642  227988      4 9996444  75 6899999999999999


Q ss_pred             CCCccCC
Q psy13147        147 PTYYGNG  153 (180)
Q Consensus       147 ~G~~g~~  153 (180)
                      +||.++.
T Consensus        74 ~G~~~~~   80 (86)
T 1lmj_A           74 PGHQLSP   80 (86)
T ss_dssp             TTSCCCS
T ss_pred             CCcccCC
Confidence            9999864

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.23  E-value=5.4e-12  Score=101.52  Aligned_cols=128  Identities=25%  Similarity=0.651  Sum_probs=54.9

Q ss_pred             CCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC-CCCCCCCCCCCCCcccC-Cccc------------CCCccCC
Q psy13147         16 ACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR-PECLCNSDCPFNMACLG-QKCR------------DPCQGTC   81 (180)
Q Consensus        16 ~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~-~~C~~~~~C~~~~~C~~-~~C~------------~~C~~~C   81 (180)
                      +| +++|.++++|.+   . +.|. |++||+|+.  |. ++|.  ..|..+..|.+ ++|+            +.|..+|
T Consensus       150 ~C-~~~C~~~G~C~~---~-~~C~-C~~G~~G~~--C~~~~C~--~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C  219 (324)
T 2ygq_A          150 EC-PGGCRNGGFCNE---R-RICE-CPDGFHGPH--CEKALCT--PRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTC  219 (324)
T ss_dssp             CC-SSCCCSSCEECT---T-SCEE-CCTTEESSS--SCEESSS--SCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCC
T ss_pred             CC-CCCCCCCCEECC---C-CeEE-CCCCCcCCC--CCCCCCC--CCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCC
Confidence            44 368999999974   4 8999 999999864  32 3333  23444444443 2332            3455678


Q ss_pred             CCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccCCcCCCccCC
Q psy13147         82 GVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPEC  161 (180)
Q Consensus        82 ~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~deC  161 (180)
                      ..+++|++   .+.|.|++||.|.   .|+.        ++|. .+|.+++.|+.   .++|.|++||.|+...  +++|
T Consensus       220 ~~~G~C~~---~~~C~C~~G~~G~---~C~~--------~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~--~~~C  279 (324)
T 2ygq_A          220 FNGGTCFY---PGKCICPPGLEGE---QCEI--------SKCP-QPCRNGGKCIG---KSKCKCSKGYQGDLCS--KPVC  279 (324)
T ss_dssp             CSSCCBSC---SSCBCCCTTCCTT---TTC--------------------------------------------------
T ss_pred             CCCCeeCC---CCeeeCCCCccCC---CCCc--------CcCC-CcCCCCCEECC---CCEEECCCCCcCCCCc--CCCC
Confidence            88889976   3789999999998   7863        6674 68888899974   5799999999987331  4667


Q ss_pred             cCCCCCCCCCcccC
Q psy13147        162 VLNTDCPNSAACIN  175 (180)
Q Consensus       162 ~~~~~C~~~~~C~n  175 (180)
                      .  ..|..+++|++
T Consensus       280 ~--~~C~~~g~C~~  291 (324)
T 2ygq_A          280 E--PGCGAHGTCHE  291 (324)
T ss_dssp             --------------
T ss_pred             C--CCCCCCCEECC
Confidence            6  36777788875

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.21  E-value=1.2e-11  Score=84.99  Aligned_cols=86  Identities=24%  Similarity=0.514  Sum_probs=60.6

Q ss_pred             CccCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCC--CCCCC--CCCCCCCeeeecCCceeeecCCCCccC
Q psy13147         77 CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPP--NPCDH--VYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus        77 C~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~--d~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      |...|.++++|+++.++|+|.|++||+|.   .|++      ++  ++|..  ..|..  +|+++.++|+|.|++||.|.
T Consensus        18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~---~C~~------~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~   86 (114)
T 1aut_L           18 CASLCCGHGTCIDGIGSFSCDCRSGWEGR---FCQR------EVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLG   86 (114)
T ss_dssp             SSSTTTTSEEECCCSSCCCEEECTTEEST---TSCE------ECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEEC
T ss_pred             ccccCCCcCCCCCCCCCcEeeCCCCCcCC---CcCc------CCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeEC
Confidence            33458889999999999999999999998   7876      32  46853  34643  99999999999999999975


Q ss_pred             Cc-CCCccCCcCCCCCCCCCcccC
Q psy13147        153 GA-LGCRPECVLNTDCPNSAACIN  175 (180)
Q Consensus       153 ~~-~~C~deC~~~~~C~~~~~C~n  175 (180)
                      .. ..|++. . ..+|...+.|+.
T Consensus        87 ~~g~~C~~~-~-~~pC~~~~~~i~  108 (114)
T 1aut_L           87 DDLLQCHPA-V-KFPCGRPWKRME  108 (114)
T ss_dssp             TTSSCEEEC-S-SSCTTCCC----
T ss_pred             CCCCccCcC-c-ccCCCCCCccCC
Confidence            32 134321 1 156776666654

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.20  E-value=2e-11  Score=83.81  Aligned_cols=94  Identities=20%  Similarity=0.338  Sum_probs=61.5

Q ss_pred             CCCCCCCCCC--------CCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCc---cC
Q psy13147         12 NDSLACKPNP--------CDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQ---GT   80 (180)
Q Consensus        12 ~d~~~C~~~~--------C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~---~~   80 (180)
                      +|+|+|..+|        |.++++|+++.++ |+|. |++||+|..  |++    ...            +++|.   ..
T Consensus         4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~-y~C~-C~~G~~G~~--C~~----~~~------------~~~C~~~~~~   63 (114)
T 1aut_L            4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGS-FSCD-CRSGWEGRF--CQR----EVS------------FLNCSLDNGG   63 (114)
T ss_dssp             ----CCCCCSSCCSSSSTTTTSEEECCCSSC-CCEE-ECTTEESTT--SCE----ECC------------SSSSSSGGGG
T ss_pred             eecccccCCCccccccccCCCcCCCCCCCCC-cEee-CCCCCcCCC--cCc----CCc------------CCcCcCCCCC
Confidence            5889999888        9999999999988 9999 999999864  321    000            12332   23


Q ss_pred             CCCCCeEeecCCCceeeCCCCCccCCC-CCccCCCCCCCCCCCCCCCCCCCCCeeeec
Q psy13147         81 CGVNALCTVVHHTPACYCPQGTIGNPY-EHCATPLAPVPPPNPCDHVYCGSNAVCKHT  137 (180)
Q Consensus        81 C~~~~~C~~~~g~~~C~C~~g~~g~~~-~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~  137 (180)
                      |.  .+|+++.++|+|.|++||++... ..|++      + +   ..+|+..+.++..
T Consensus        64 C~--~~C~n~~g~y~C~C~~G~~~~~~g~~C~~------~-~---~~pC~~~~~~i~~  109 (114)
T 1aut_L           64 CT--HYCLEEVGWRRCSCAPGYKLGDDLLQCHP------A-V---KFPCGRPWKRMEK  109 (114)
T ss_dssp             CS--SEEEECSSSEEEECCTTEEECTTSSCEEE------C-S---SSCTTCCC-----
T ss_pred             CC--CEeECCCCCEEeECCCCeeECCCCCccCc------C-c---ccCCCCCCccCCC
Confidence            54  38999999999999999997532 26765      3 2   3577776666643

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.19  E-value=2.6e-14  Score=111.19  Aligned_cols=137  Identities=5%  Similarity=-0.262  Sum_probs=91.1

Q ss_pred             CCCCCCCeeeecCCCeeecCCCCCCCcCCCC-CCCCCCCC-----CCCCCCCCcccCC-cc--cCCCc-cCCCCCCeEee
Q psy13147         20 NPCDPYSSCSVYSEHVAMCDPCSGPQAPWLP-HCRPECLC-----NSDCPFNMACLGQ-KC--RDPCQ-GTCGVNALCTV   89 (180)
Q Consensus        20 ~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~-~C~~~C~~-----~~~C~~~~~C~~~-~C--~~~C~-~~C~~~~~C~~   89 (180)
                      .+|.++++|++..++ |.|. |++||+|..- .-+++|..     ...|.++..|+.+ .|  .++|. .+|..+++|++
T Consensus        38 ~~c~ngG~C~~g~~~-y~C~-Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~  115 (267)
T 4fbr_A           38 IKSDDGGKTLKGTMT-YNGE-GPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLT  115 (267)
T ss_dssp             EECSSTTSEEEEEEE-ETTS-CCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEE
T ss_pred             CCcCCCCeecCCCCC-eEEe-CCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEec
Confidence            478899999999988 9999 9999998741 11233221     1223333333221 12  24563 58999999999


Q ss_pred             cCCCceeeCCCCCccCCCCCccCCC------------------------CCCCCCCCCCCCCCCCCCeeeecCCceeeec
Q psy13147         90 VHHTPACYCPQGTIGNPYEHCATPL------------------------APVPPPNPCDHVYCGSNAVCKHTNGIVTCEC  145 (180)
Q Consensus        90 ~~g~~~C~C~~g~~g~~~~~C~~~~------------------------~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C  145 (180)
                      ...+|+|.|+.||+|.   .|+...                        ... ..++|.+.+|.++++|++..++|+|.|
T Consensus       116 ~~~sy~C~C~~Gf~G~---~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~-~~i~c~~~~c~ngg~C~dg~~~y~C~C  191 (267)
T 4fbr_A          116 GTTTYNGEGPIGFKSE---VTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGK-QNVINVDAKSNDGGKTLSGTMTYNGEG  191 (267)
T ss_dssp             EEEEETTSCCEEEEEE---ECCCCEEEEEEECSSTTSCCEEEEEEECCSSTT-SCEEEEEEECSSTTSEEEEEEEETTSC
T ss_pred             CCccEEeeCCCCcccc---CCCCCcccccccCCcCCccccCCcceecccccc-cccccCCCCCCCCCEeeCCCCCeEEeC
Confidence            9999999999999986   343210                        000 001122356888999999999999999


Q ss_pred             CCCCccCCcCCCccCCc
Q psy13147        146 LPTYYGNGALGCRPECV  162 (180)
Q Consensus       146 ~~G~~g~~~~~C~deC~  162 (180)
                      ++||.|.....-++||+
T Consensus       192 p~Gf~G~~c~~~i~ec~  208 (267)
T 4fbr_A          192 PIGFRGTLTSPDTYTVE  208 (267)
T ss_dssp             CEEEEEEEEETTEEEEE
T ss_pred             CCCccccccccccceec
Confidence            99999863322245644

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.18  E-value=1.4e-11  Score=107.75  Aligned_cols=133  Identities=18%  Similarity=0.394  Sum_probs=93.4

Q ss_pred             CCCCCCCCCCCeeeecCCCeee---cCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCc-----cCCCCCCeE
Q psy13147         16 ACKPNPCDPYSSCSVYSEHVAM---CDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQ-----GTCGVNALC   87 (180)
Q Consensus        16 ~C~~~~C~~~~~C~~~~~~~~~---C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~-----~~C~~~~~C   87 (180)
                      +|..+||.+++.|.+..|. |.   |. |++||+|..-.+.    ...        ....+.++|.     .+|..+++|
T Consensus       436 ~C~~~pc~n~~~C~~g~G~-~~~G~C~-C~~Gy~G~~Ce~~----~~~--------~~~~~~~~C~~~~~~~~Cs~~G~C  501 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNGNGT-FECGVCR-CGPGWLGSQCECS----EED--------YRPSQQDECSPREGQPVCSQRGEC  501 (690)
T ss_dssp             GGGTTCCTTCTTTTTTSEE-EETTEEE-ECTTCCSSSSCCS----CC--------------CCCCSSSSSSCGGGGSEEE
T ss_pred             CCcCCCCCCCCcccCCCCe-EeCCceE-eCCCccCCceeec----cCc--------cCCccCCcCCCCCCCCCCCCCCEE
Confidence            5668899999999876666 77   99 9999998642211    000        0001113332     247788899


Q ss_pred             eecCCCceeeCC----CCCccCCCCCccCCCCCCCCCCCCCC---CCCCCCCeeeecCCceeeecCCCCccCCcC--CCc
Q psy13147         88 TVVHHTPACYCP----QGTIGNPYEHCATPLAPVPPPNPCDH---VYCGSNAVCKHTNGIVTCECLPTYYGNGAL--GCR  158 (180)
Q Consensus        88 ~~~~g~~~C~C~----~g~~g~~~~~C~~~~~~~~~~d~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~--~C~  158 (180)
                      +.    +.|.|.    +||.|.   .|+.      .+++|..   .+|..++.|.+    +.|.|++||.|....  ..+
T Consensus       502 ~~----g~C~C~~~~~~Gy~G~---~Ce~------~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~  564 (690)
T 3fcs_B          502 LC----GQCVCHSSDFGKITGK---YCEC------DDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRT  564 (690)
T ss_dssp             CS----SSEEECCCSSCCCBST---TSCB------CSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCC
T ss_pred             EC----CeeEeecCCCCCeeCC---CcCc------ccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCC
Confidence            73    689999    999998   8874      2478863   47988999976    789999999998653  124


Q ss_pred             cCCcCC--CCCCCCCcccCCccc
Q psy13147        159 PECVLN--TDCPNSAACINNSII  179 (180)
Q Consensus       159 deC~~~--~~C~~~~~C~n~~~~  179 (180)
                      ++|...  .+|..+++|++..|+
T Consensus       565 ~~C~~~~g~~C~~~G~C~~g~C~  587 (690)
T 3fcs_B          565 DTCMSSNGLLCSGRGKCECGSCV  587 (690)
T ss_dssp             TTTBCTTSSBTSSSCEEETTEEE
T ss_pred             CcccCCCCCCCCCCCEEeCCEEE
Confidence            688753  579888999887653

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.17  E-value=1.4e-11  Score=80.65  Aligned_cols=68  Identities=26%  Similarity=0.620  Sum_probs=51.8

Q ss_pred             CCCCCCCCCC--CCCCCeeeecCCCeeecCCCCCCCcCCC--CCCCCCCCCCCCCCCCCcccCCcccCCC-ccCCCCCCe
Q psy13147         12 NDSLACKPNP--CDPYSSCSVYSEHVAMCDPCSGPQAPWL--PHCRPECLCNSDCPFNMACLGQKCRDPC-QGTCGVNAL   86 (180)
Q Consensus        12 ~d~~~C~~~~--C~~~~~C~~~~~~~~~C~~C~~G~~g~~--~~C~~~C~~~~~C~~~~~C~~~~C~~~C-~~~C~~~~~   86 (180)
                      +|+|+|..+|  | ++++|+++.++ |+|. |++||++..  ..|++                   ++|| .++|.  ++
T Consensus         1 ~dideC~~~~~~C-~~~~C~n~~g~-y~C~-C~~G~~~~~~g~~C~d-------------------ideC~~~~C~--~~   56 (87)
T 1z6c_A            1 KDVDECSLKPSIC-GTAVCKNIPGD-FECE-CPEGYRYNLKSKSCED-------------------IDECSENMCA--QL   56 (87)
T ss_dssp             CCSCSSSSSSSSB-TTSSCCCBTTB-CCCS-SSTTCEEETTTTEEEC-------------------CCHHHHSCCS--SE
T ss_pred             CccccccCCCCCC-CCCEeECCCCC-EEEE-CCCCceECCCCCcCCC-------------------cCeeCCCCCC--CE
Confidence            4789999666  8 78999999998 9999 999999652  33421                   2445 24675  79


Q ss_pred             EeecCCCceeeCC--CCCc
Q psy13147         87 CTVVHHTPACYCP--QGTI  103 (180)
Q Consensus        87 C~~~~g~~~C~C~--~g~~  103 (180)
                      |+++.++|+|.|+  +||.
T Consensus        57 C~n~~g~y~C~C~g~~G~~   75 (87)
T 1z6c_A           57 CVNYPGGYTCYCDGKKGFK   75 (87)
T ss_dssp             ECCCSSSCCEECCSSSCCB
T ss_pred             EEccCCCEEEECCCCcCCc
Confidence            9999999999996  4543

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.17  E-value=1.1e-11  Score=81.00  Aligned_cols=66  Identities=27%  Similarity=0.637  Sum_probs=52.7

Q ss_pred             CCCc-cC--CCCCCeEeecCCCceeeCCCCCccCC-CCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecC--CC
Q psy13147         75 DPCQ-GT--CGVNALCTVVHHTPACYCPQGTIGNP-YEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECL--PT  148 (180)
Q Consensus        75 ~~C~-~~--C~~~~~C~~~~g~~~C~C~~g~~g~~-~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~--~G  148 (180)
                      |||. .+  | .+++|+++.++|+|.|++||++.. ...|++      + |||...+|.  +.|++++++|+|.|+  .|
T Consensus         4 deC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~d------i-deC~~~~C~--~~C~n~~g~y~C~C~g~~G   73 (87)
T 1z6c_A            4 DECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCED------I-DECSENMCA--QLCVNYPGGYTCYCDGKKG   73 (87)
T ss_dssp             CSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEEC------C-CHHHHSCCS--SEECCCSSSCCEECCSSSC
T ss_pred             ccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCC------c-CeeCCCCCC--CEEEccCCCEEEECCCCcC
Confidence            5563 23  7 678999999999999999998643 227987      4 999878896  699999999999996  45


Q ss_pred             Cc
Q psy13147        149 YY  150 (180)
Q Consensus       149 ~~  150 (180)
                      |.
T Consensus        74 ~~   75 (87)
T 1z6c_A           74 FK   75 (87)
T ss_dssp             CB
T ss_pred             Cc
Confidence            54

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.12  E-value=4.1e-11  Score=85.82  Aligned_cols=78  Identities=26%  Similarity=0.513  Sum_probs=55.7

Q ss_pred             CCCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC--CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeE-
Q psy13147         11 SNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR--PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALC-   87 (180)
Q Consensus        11 ~~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~--~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C-   87 (180)
                      ++|+|+|.++||.++++|+++.++ |.|. |++||+|.  .|.  ++|...                  ...|..  +| 
T Consensus        45 c~dideC~~~pC~n~g~C~~~~~~-y~C~-C~~G~~G~--~C~~~deC~~~------------------~~~C~~--~C~  100 (146)
T 1x7a_L           45 YVDGDQCEPNPCLNGGLCKDDINS-YECW-CQVGFEGK--NCELDATCNIK------------------NGRCKQ--FCK  100 (146)
T ss_dssp             -----CCSSCSSCTTCEEEECSSC-EEEE-CCSSEEST--TTCEECCTTSG------------------GGSCSS--BCC
T ss_pred             CCCcCcCCCCCCCCCCEeECCCCC-EEEe-cCCCCcCC--cCCCCccccCC------------------CCCCcC--CCC
Confidence            579999999999999999999998 9999 99999974  343  233221                  024543  78 


Q ss_pred             eecCCCceeeCCCCCccCC-CCCccC
Q psy13147         88 TVVHHTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      +++.++|+|.|++||++.+ ...|++
T Consensus       101 ~n~~g~y~C~C~~Gy~l~~dG~~C~~  126 (146)
T 1x7a_L          101 TGADSKVLCSCTTGYRLAPDQKSCKP  126 (146)
T ss_dssp             CCSSSCCCCBCCTTEEECTTSSSEEE
T ss_pred             CCCCCCEEeEcCCCcEeCCCCCcCCC
Confidence            8899999999999998433 127876

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.10  E-value=6.4e-11  Score=84.78  Aligned_cols=67  Identities=25%  Similarity=0.627  Sum_probs=56.5

Q ss_pred             cCCC-ccCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCC--CCCCCCCee-eecCCceeeecCCCC
Q psy13147         74 RDPC-QGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDH--VYCGSNAVC-KHTNGIVTCECLPTY  149 (180)
Q Consensus        74 ~~~C-~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~--~~C~~~~~C-~~~~g~~~C~C~~G~  149 (180)
                      +|+| ..+|.++++|+++.++|+|.|++||+|.   .|++      + |+|..  .+|..  .| +++.++|+|.|++||
T Consensus        48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~------~-deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy  115 (146)
T 1x7a_L           48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK---NCEL------D-ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGY  115 (146)
T ss_dssp             --CCSSCSSCTTCEEEECSSCEEEECCSSEEST---TTCE------E-CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTE
T ss_pred             cCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC---cCCC------C-ccccCCCCCCcC--CCCCCCCCCEEeEcCCCc
Confidence            4677 3589999999999999999999999987   8988      4 99964  46754  99 999999999999999


Q ss_pred             ccC
Q psy13147        150 YGN  152 (180)
Q Consensus       150 ~g~  152 (180)
                      .+.
T Consensus       116 ~l~  118 (146)
T 1x7a_L          116 RLA  118 (146)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            943

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.06  E-value=9.8e-11  Score=83.38  Aligned_cols=79  Identities=23%  Similarity=0.483  Sum_probs=58.3

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC---CCCCCCCCCCCCCcccCCcccCCC-ccCCCCCCeE
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR---PECLCNSDCPFNMACLGQKCRDPC-QGTCGVNALC   87 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~---~~C~~~~~C~~~~~C~~~~C~~~C-~~~C~~~~~C   87 (180)
                      +|+|+|.++||.++++|+++.++ |+|. |++||+|..  |.   ++|..   |.             + .+.|.  .+|
T Consensus        45 ~did~C~~~pC~n~g~C~~~~g~-y~C~-C~~G~~G~~--C~~~~~~c~~---c~-------------~~~~~C~--~~C  102 (142)
T 2c4f_L           45 SDGDQCASSPCQNGGSCKDQLQS-YICF-CLPAFEGRN--CETHKDDQLI---CV-------------NENGGCE--QYC  102 (142)
T ss_dssp             TTCCGGGGCCCCTTCEEEEETTE-EEEE-CCTTEESTT--SCEEGGGCCS---TT-------------TGGGGCS--SEE
T ss_pred             CccCcCcCCCcCCCCEEeCCCCC-EEee-CCCCccCCc--cccCcccccc---cc-------------CCCCCcc--CEe
Confidence            68999999999999999999988 9999 999998743  32   22210   10             1 12343  289


Q ss_pred             eecCC-CceeeCCCCCccCC-CCCccC
Q psy13147         88 TVVHH-TPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        88 ~~~~g-~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      +++.+ +|+|.|++||++.+ ...|++
T Consensus       103 ~~~~g~~y~C~C~~Gy~l~~dG~~C~~  129 (142)
T 2c4f_L          103 SDHTGTKRSCRCHEGYSLLADGVSCTP  129 (142)
T ss_dssp             ECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred             ECCCCCCEEEECCCCceECCCCCCCCC
Confidence            99999 99999999998432 127876

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.04  E-value=2.3e-11  Score=84.03  Aligned_cols=87  Identities=30%  Similarity=0.653  Sum_probs=63.6

Q ss_pred             cCCCc-cCCCCCCeEeec-CCCceeeCCCCCccCCC--CCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCC
Q psy13147         74 RDPCQ-GTCGVNALCTVV-HHTPACYCPQGTIGNPY--EHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTY  149 (180)
Q Consensus        74 ~~~C~-~~C~~~~~C~~~-~g~~~C~C~~g~~g~~~--~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~  149 (180)
                      +|+|. .+|.  .+|+++ .++|+|.|++||+|...  ..|+         ++|...+|.  +.|++ .++|+|.|++||
T Consensus         4 ideC~~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~---------~~C~~~~C~--~~C~~-~~~y~C~C~~Gy   69 (118)
T 1dx5_I            4 VDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPIPHEPHRCQ---------MFCNQTACP--ADCDP-NTQASCECPEGY   69 (118)
T ss_dssp             CCGGGGCCCS--SEEEECSSSCEEEECCTTEEEETTEEEEEE---------ECCCSSEEE--CEECT-TSTTCEECCTTE
T ss_pred             cccCCCCCCC--CCCCCCCCCCEEeECCCCccccCCCCCccc---------cccCCCCCC--CcccC-CCCeEeECCCCc
Confidence            35663 4786  399999 89999999999998732  1332         234455664  68988 589999999999


Q ss_pred             ccCCcCCC--ccCCcCCCCCCCCCcccCC
Q psy13147        150 YGNGALGC--RPECVLNTDCPNSAACINN  176 (180)
Q Consensus       150 ~g~~~~~C--~deC~~~~~C~~~~~C~n~  176 (180)
                      +++....|  +|||...++|  +++|+|+
T Consensus        70 ~~~~g~~C~dideC~~~~~C--~~~C~n~   96 (118)
T 1dx5_I           70 ILDDGFICTDIDECENGGFC--SGVCHNL   96 (118)
T ss_dssp             EEETTTEEEECCHHHHCSSC--SSEEEEC
T ss_pred             cCCCCCccccccccCCCCCC--cCeEEeC
Confidence            96532246  6799875688  7888876

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.03  E-value=2.1e-11  Score=89.36  Aligned_cols=111  Identities=23%  Similarity=0.488  Sum_probs=71.5

Q ss_pred             CCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC-CCCCCCCCCC-CCCcccC-Cccc----------CCCc-cC-CCCCC
Q psy13147         21 PCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR-PECLCNSDCP-FNMACLG-QKCR----------DPCQ-GT-CGVNA   85 (180)
Q Consensus        21 ~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~-~~C~~~~~C~-~~~~C~~-~~C~----------~~C~-~~-C~~~~   85 (180)
                      .|..+++|..   . ..|. |++||+|+.  |. ++|..  .|. .+..|.+ ++|+          ++|. .+ |. ++
T Consensus        39 ~c~~~g~C~~---~-g~C~-C~~G~~G~~--C~~~~C~~--~C~~~~g~C~~~~~C~C~~G~~G~~C~~C~~~~~C~-~g  108 (169)
T 2vj2_A           39 DFFGHYACDQ---N-GNKT-CMEGWMGPE--CNRAICRQ--GCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHPGCV-HG  108 (169)
T ss_dssp             ETTEEEEECS---S-CCEE-ECTTEESTT--SCEECCCT--TCCTTTEECSSTTCCEECTTEESSSSCEECCCTTCS-SE
T ss_pred             CcCCCCEeCC---C-CeeE-CCCCCcCCC--CCCCCCCC--CCCCCCcccCCCCeeECCCCCCCCCcccCCCCCCCC-CC
Confidence            3444556642   2 4679 999999863  32 33432  232 2223332 3332          2332 22 65 34


Q ss_pred             eEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-CCCCCCCCeeeec-CCceeeecCCCCccCC
Q psy13147         86 LCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-HVYCGSNAVCKHT-NGIVTCECLPTYYGNG  153 (180)
Q Consensus        86 ~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~-~g~~~C~C~~G~~g~~  153 (180)
                      +|+   +.|+|.|++||+|.   .|+.      .+++|. ..+|.++++|+++ +++|+|+|++||+|..
T Consensus       109 ~C~---~~~~C~C~~G~~G~---~C~~------~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~  166 (169)
T 2vj2_A          109 ICN---EPWQCLCETNWGGQ---LCDK------DLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPN  166 (169)
T ss_dssp             ECS---STTCCEECTTEETT---TTCE------ESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTT
T ss_pred             CcC---CCCEEeCCCCCCCC---cccC------CCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcC
Confidence            776   57899999999987   7873      248886 3789889999986 8999999999998863

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.02  E-value=6.8e-11  Score=88.40  Aligned_cols=67  Identities=24%  Similarity=0.560  Sum_probs=24.8

Q ss_pred             cCCCc-cCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCC-CCCCC--CCCCCCCeeeecCCceeeecCCCC
Q psy13147         74 RDPCQ-GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPP-NPCDH--VYCGSNAVCKHTNGIVTCECLPTY  149 (180)
Q Consensus        74 ~~~C~-~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~-d~C~~--~~C~~~~~C~~~~g~~~C~C~~G~  149 (180)
                      +++|. .+|.++++|++..++|.|.|++||.|.   .|++      .+ ++|..  .+|..  .|+++.++|.|.|++||
T Consensus        42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~---~Ce~------~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy  110 (195)
T 1nfu_B           42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCEL------FTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGY  110 (195)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTE
T ss_pred             CcccCCCCCCCCCEeECCCCCeeEeCCCCceec---cccc------cccccccCCCCCCCC--EeECCCCCeEEECCCCc
Confidence            36673 579989999999999999999999987   8986      45 78964  56754  99999999999999999


Q ss_pred             cc
Q psy13147        150 YG  151 (180)
Q Consensus       150 ~g  151 (180)
                      .+
T Consensus       111 ~l  112 (195)
T 1nfu_B          111 TL  112 (195)
T ss_dssp             EE
T ss_pred             ee
Confidence            94

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.02  E-value=8.1e-11  Score=88.01  Aligned_cols=78  Identities=21%  Similarity=0.479  Sum_probs=25.3

Q ss_pred             CCCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCccc-CCCc---cCCCCCCe
Q psy13147         11 SNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCR-DPCQ---GTCGVNAL   86 (180)
Q Consensus        11 ~~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~-~~C~---~~C~~~~~   86 (180)
                      +.|+|+|.++||.++++|++..++ |.|. |++||+|..  |.+    .              + ++|.   .+|..  .
T Consensus        39 c~dideC~~~pC~ngg~C~n~~g~-y~C~-C~~Gf~G~~--Ce~----~--------------i~deC~~~~~~C~~--~   94 (195)
T 1nfu_B           39 YKDGDQCETSPCQNQGKCKDGLGE-YTCT-CLEGFEGKN--CEL----F--------------TRKLCSLDNGDCDQ--F   94 (195)
T ss_dssp             ----------------------------------------------------------------CCGGGTGGGGCSS--E
T ss_pred             CCCCcccCCCCCCCCCEeECCCCC-eeEe-CCCCceecc--ccc----c--------------ccccccCCCCCCCC--E
Confidence            579999999999999999999988 9999 999999742  321    0              1 2231   24653  8


Q ss_pred             EeecCCCceeeCCCCCccCC-CCCccC
Q psy13147         87 CTVVHHTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        87 C~~~~g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      |+++.++|.|.|++||.+.+ ...|++
T Consensus        95 C~n~~gsy~C~C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B           95 CHEEQNSVVCSCARGYTLADNGKACIP  121 (195)
T ss_dssp             EEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             eECCCCCeEEECCCCceeCCCCCcccc
Confidence            99999999999999998332 127876

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.01  E-value=1.7e-10  Score=82.16  Aligned_cols=70  Identities=20%  Similarity=0.442  Sum_probs=55.1

Q ss_pred             cCCCc-cCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCC---eeeecCC-ceeeecCCC
Q psy13147         74 RDPCQ-GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNA---VCKHTNG-IVTCECLPT  148 (180)
Q Consensus        74 ~~~C~-~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~---~C~~~~g-~~~C~C~~G  148 (180)
                      +++|. .+|.++++|+++.++|+|.|++||+|.   .|++      .+++|...++.+++   .|+++.+ +|+|.|++|
T Consensus        47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~---~C~~------~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~G  117 (142)
T 2c4f_L           47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR---NCET------HKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEG  117 (142)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEEST---TSCE------EGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTT
T ss_pred             cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCC---cccc------CccccccccCCCCCccCEeECCCCCCEEEECCCC
Confidence            46774 589999999999999999999999987   8874      23555333333333   9999999 999999999


Q ss_pred             CccC
Q psy13147        149 YYGN  152 (180)
Q Consensus       149 ~~g~  152 (180)
                      |.+.
T Consensus       118 y~l~  121 (142)
T 2c4f_L          118 YSLL  121 (142)
T ss_dssp             EEEC
T ss_pred             ceEC
Confidence            9943

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.00  E-value=1.1e-10  Score=82.44  Aligned_cols=78  Identities=21%  Similarity=0.479  Sum_probs=25.1

Q ss_pred             CCCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCccc-CCCc---cCCCCCCe
Q psy13147         11 SNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCR-DPCQ---GTCGVNAL   86 (180)
Q Consensus        11 ~~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~-~~C~---~~C~~~~~   86 (180)
                      ..|+|+|.++||.++++|+++.++ |+|. |++||+|..  |.+    .              + ++|.   .+|..  +
T Consensus        39 c~d~d~C~~~pC~n~g~C~~~~~~-y~C~-C~~G~~G~~--C~~----~--------------i~d~C~~~~~~C~~--~   94 (134)
T 2vh0_B           39 YKDGDQCETSPCQNQGKCKDGLGE-YTCT-CLEGFEGKN--CEL----F--------------TRKLCSLDNGDCDQ--F   94 (134)
T ss_dssp             ----------------------------------------------------------------CCGGGTGGGGCSS--E
T ss_pred             CCCcCcCCCCCCCCcCCcccCCCC-EEee-CCCCccCCc--ccc----C--------------CCCccccCCCCCCC--E
Confidence            578999999999999999999888 9999 999999742  311    0              1 2231   24543  8


Q ss_pred             EeecCCCceeeCCCCCccCC-CCCccC
Q psy13147         87 CTVVHHTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        87 C~~~~g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      |+++.++|+|.|++||++.. ...|++
T Consensus        95 C~~~~g~y~C~C~~Gy~l~~~g~~C~~  121 (134)
T 2vh0_B           95 CHEEQNSVVCSCARGYTLADNGKACIP  121 (134)
T ss_dssp             EEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             eECCCCCEEEECCCCcEECCCCCccCc
Confidence            99999999999999998432 127876

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.98  E-value=1.4e-10  Score=81.79  Aligned_cols=68  Identities=24%  Similarity=0.550  Sum_probs=24.9

Q ss_pred             cCCCc-cCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCC-CCCCC--CCCCCCCeeeecCCceeeecCCCC
Q psy13147         74 RDPCQ-GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPP-NPCDH--VYCGSNAVCKHTNGIVTCECLPTY  149 (180)
Q Consensus        74 ~~~C~-~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~-d~C~~--~~C~~~~~C~~~~g~~~C~C~~G~  149 (180)
                      +++|. .+|.++++|+++.++|+|.|++||+|.   .|++      .+ |+|..  .+|..  .|+++.++|+|.|++||
T Consensus        42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~------~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy  110 (134)
T 2vh0_B           42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCEL------FTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGY  110 (134)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTE
T ss_pred             cCcCCCCCCCCcCCcccCCCCEEeeCCCCccCC---cccc------CCCCccccCCCCCCC--EeECCCCCEEEECCCCc
Confidence            35663 578888999999999999999999987   8876      45 78864  45754  99999999999999999


Q ss_pred             ccC
Q psy13147        150 YGN  152 (180)
Q Consensus       150 ~g~  152 (180)
                      .+.
T Consensus       111 ~l~  113 (134)
T 2vh0_B          111 TLA  113 (134)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            943

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.98  E-value=1.3e-10  Score=85.07  Aligned_cols=86  Identities=26%  Similarity=0.638  Sum_probs=54.0

Q ss_pred             CCCCCCCC-CCCeeeecCCCeeecCCCCCCCcCCC-CCCC--CCCCCCCCCCCCCcc--cC----Ccc---cCCCc--cC
Q psy13147         16 ACKPNPCD-PYSSCSVYSEHVAMCDPCSGPQAPWL-PHCR--PECLCNSDCPFNMAC--LG----QKC---RDPCQ--GT   80 (180)
Q Consensus        16 ~C~~~~C~-~~~~C~~~~~~~~~C~~C~~G~~g~~-~~C~--~~C~~~~~C~~~~~C--~~----~~C---~~~C~--~~   80 (180)
                      +|. ..|. .++.|++   . ++|. |++||+|.. ..|.  +.|..+ .|.....|  ..    ..|   +++|.  .+
T Consensus        67 ~C~-~~C~~~~g~C~~---~-~~C~-C~~G~~G~~C~~C~~~~~C~~g-~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~  139 (169)
T 2vj2_A           67 ICR-QGCSPKHGSCKL---P-GDCR-CQYGWQGLYCDKCIPHPGCVHG-ICNEPWQCLCETNWGGQLCDKDLNYCGTHQP  139 (169)
T ss_dssp             CCC-TTCCTTTEECSS---T-TCCE-ECTTEESSSSCEECCCTTCSSE-ECSSTTCCEECTTEETTTTCEESCHHHHTCC
T ss_pred             CCC-CCCCCCCcccCC---C-CeeE-CCCCCCCCCcccCCCCCCCCCC-CcCCCCEEeCCCCCCCCcccCCCCCCCCCCC
Confidence            344 3464 5678865   4 8999 999999864 1121  113321 23211111  11    112   35563  57


Q ss_pred             CCCCCeEeec-CCCceeeCCCCCccCCCCCcc
Q psy13147         81 CGVNALCTVV-HHTPACYCPQGTIGNPYEHCA  111 (180)
Q Consensus        81 C~~~~~C~~~-~g~~~C~C~~g~~g~~~~~C~  111 (180)
                      |..+++|+++ .++|+|.|++||+|.   .|+
T Consensus       140 C~~~g~C~~~~~~~~~C~C~~G~~G~---~Ce  168 (169)
T 2vj2_A          140 CLNGGTCSNTGPDKYQCSCPEGYSGP---NCE  168 (169)
T ss_dssp             CCTTCEEEECSTTCEEEECCTTCCST---TSC
T ss_pred             CCCCCEEcCCCCCCcEeECCCCCcCc---CcC
Confidence            9999999997 799999999999998   775

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.95  E-value=9.7e-10  Score=87.75  Aligned_cols=68  Identities=26%  Similarity=0.558  Sum_probs=58.4

Q ss_pred             cCCCc-cCCCCCCeEeecCCCceeeCCCCCccCCCCCcc-CCCCCCCCCCCCCC---CCCCCCCeeeecCCceeeecCCC
Q psy13147         74 RDPCQ-GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCA-TPLAPVPPPNPCDH---VYCGSNAVCKHTNGIVTCECLPT  148 (180)
Q Consensus        74 ~~~C~-~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~-~~~~~~~~~d~C~~---~~C~~~~~C~~~~g~~~C~C~~G  148 (180)
                      +|+|. .+|.++++|++..++|.|.|++||.|.   .|+ +       +|+|..   .+|..  .|+++.++|.|.|++|
T Consensus         5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~---~C~~~-------~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g   72 (317)
T 3h5c_B            5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGS---NCELA-------KNECHPERTDGCQH--FCLPGQESYTCSCAQG   72 (317)
T ss_dssp             -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSS---SSCCC-------SSSCCTTCTTSCSS--EEECCSSSCEEECCTT
T ss_pred             CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCC---ccccC-------cccCCCCCCCCCcC--ccccCCCeeEEecccc
Confidence            36663 578889999999999999999999988   898 5       599975   78975  9999999999999999


Q ss_pred             CccCC
Q psy13147        149 YYGNG  153 (180)
Q Consensus       149 ~~g~~  153 (180)
                      |.+..
T Consensus        73 ~~~~~   77 (317)
T 3h5c_B           73 YRLGE   77 (317)
T ss_dssp             EECCT
T ss_pred             ccccc
Confidence            99854

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.94  E-value=2.6e-09  Score=93.40  Aligned_cols=118  Identities=25%  Similarity=0.677  Sum_probs=81.3

Q ss_pred             CCCCC----CCCCCCCeeeecCCCeeecCCCC----CCCcCCCCCC-CCCCCCCCCCCCCCcccCCcccCCCccCCCCCC
Q psy13147         15 LACKP----NPCDPYSSCSVYSEHVAMCDPCS----GPQAPWLPHC-RPECLCNSDCPFNMACLGQKCRDPCQGTCGVNA   85 (180)
Q Consensus        15 ~~C~~----~~C~~~~~C~~~~~~~~~C~~C~----~G~~g~~~~C-~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~   85 (180)
                      ++|..    .+|.++++|++     +.|. |+    +||+|..-.+ .++|....                 ..+|..++
T Consensus       484 ~~C~~~~~~~~Cs~~G~C~~-----g~C~-C~~~~~~Gy~G~~Ce~~~~~C~~~~-----------------~~~C~~~G  540 (690)
T 3fcs_B          484 DECSPREGQPVCSQRGECLC-----GQCV-CHSSDFGKITGKYCECDDFSCVRYK-----------------GEMCSGHG  540 (690)
T ss_dssp             CCCSSSSSSCGGGGSEEECS-----SSEE-ECCCSSCCCBSTTSCBCSSCCCBSS-----------------SSBGGGSE
T ss_pred             CcCCCCCCCCCCCCCCEEEC-----CeeE-eecCCCCCeeCCCcCcccCcCcCCC-----------------CCCCCCCC
Confidence            77874    45988999973     6899 99    9999864221 12222100                 12576778


Q ss_pred             eEeecCCCceeeCCCCCccCCCCCcc--CCCCCCCCCCCCCC---CCCCCCCeeeecCCceeeec-CCCCccCCcCCCcc
Q psy13147         86 LCTVVHHTPACYCPQGTIGNPYEHCA--TPLAPVPPPNPCDH---VYCGSNAVCKHTNGIVTCEC-LPTYYGNGALGCRP  159 (180)
Q Consensus        86 ~C~~~~g~~~C~C~~g~~g~~~~~C~--~~~~~~~~~d~C~~---~~C~~~~~C~~~~g~~~C~C-~~G~~g~~~~~C~d  159 (180)
                      .|++    +.|.|.+||.|.   .|+  .      .+++|..   .+|..++.|++    .+|.| ++||.|.....| +
T Consensus       541 ~C~~----g~C~C~~Gy~G~---~CeC~~------~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~C-~  602 (690)
T 3fcs_B          541 QCSC----GDCLCDSDWTGY---YCNCTT------RTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSYGDTCEKC-P  602 (690)
T ss_dssp             EEET----TEEEECTTEESS---SSCEEC------CCTTTBCTTSSBTSSSCEEET----TEEECCSTTCBSTTSCBC-T
T ss_pred             EecC----CeeECcCCCcCC---CCccCC------CCCcccCCCCCCCCCCCEEeC----CEEECCCCCccCCCcCcC-C
Confidence            8875    799999999998   776  2      2478864   67999999976    28999 999998754321 3


Q ss_pred             CCcCCCCCCCCCcccC
Q psy13147        160 ECVLNTDCPNSAACIN  175 (180)
Q Consensus       160 eC~~~~~C~~~~~C~n  175 (180)
                      .|.  ++|..++.|++
T Consensus       603 ~C~--~~C~~~g~Cv~  616 (690)
T 3fcs_B          603 TCP--DACTFKKECVE  616 (690)
T ss_dssp             TSC--CTTTSCCGGGT
T ss_pred             CCC--CCCCCCCCccc
Confidence            452  46777777764

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.94  E-value=5.1e-10  Score=90.01  Aligned_cols=114  Identities=22%  Similarity=0.647  Sum_probs=29.4

Q ss_pred             CCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCC---CCCCCCCCCCCCCCCCCccc--C----Cccc-CCCccCCCCCC
Q psy13147         16 ACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL---PHCRPECLCNSDCPFNMACL--G----QKCR-DPCQGTCGVNA   85 (180)
Q Consensus        16 ~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~---~~C~~~C~~~~~C~~~~~C~--~----~~C~-~~C~~~C~~~~   85 (180)
                      .|. .+|.++++|..   . +.|. |++||+|..   ..|...|..+..|.....|.  .    ..|. ++|..+|..++
T Consensus       182 ~C~-~~C~~~G~C~~---~-~~C~-C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g  255 (324)
T 2ygq_A          182 LCT-PRCMNGGLCVT---P-GFCI-CPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGG  255 (324)
T ss_dssp             SSS-SCCCTTCEECS---S-CCEE-CCTTCBTTTTCBCCCSSCCCSSCCBSCSSCBCCCTTCCTTTTC------------
T ss_pred             CCC-CCCCCCCEEcC---C-CEEe-CCCCccCCCcccCcCCCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCC
Confidence            354 47988999975   3 7899 999999874   12333444333333222221  0    1221 34556788888


Q ss_pred             eEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         86 LCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        86 ~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|+.   .+.|.|++||.|.   .|+.        ++|. .+|..++.|++   .++|.|++||.|..
T Consensus       256 ~C~~---~~~C~C~~G~~G~---~C~~--------~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~  305 (324)
T 2ygq_A          256 KCIG---KSKCKCSKGYQGD---LCSK--------PVCE-PGCGAHGTCHE---PNKCQCQEGWHGRH  305 (324)
T ss_dssp             --------------------------------------------------------------------
T ss_pred             EECC---CCEEECCCCCcCC---CCcC--------CCCC-CCCCCCCEECC---CCEeECCCCCcCCC
Confidence            8974   5899999999998   8863        6675 57888999986   47999999999864

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.93  E-value=2.4e-10  Score=77.58  Aligned_cols=60  Identities=20%  Similarity=0.522  Sum_probs=23.9

Q ss_pred             CeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ++|+++.++|+|.|++||.+.....|++      | |||. +.+|.  +.|+++.++|.|.|++||.++.
T Consensus        41 ~~C~n~~g~y~C~C~~Gy~g~~g~~C~d------i-deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~~  101 (107)
T 2w2n_E           41 YVCNDLKIGYECLCPDGFQLVAQRRCED------I-DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDP  101 (107)
T ss_dssp             SEEECCSBSCEEECCTTCEEETTTEEEC------------------------------------------
T ss_pred             CEeEeCCCCeEEECCCCccccCCCcccc------c-cccCCCCCcC--CeeecCCCCEEEECCCCceECC
Confidence            6899999999999999999843338988      4 9996 47885  6999999999999999998764

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.91  E-value=3e-09  Score=84.88  Aligned_cols=78  Identities=23%  Similarity=0.450  Sum_probs=58.0

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC---CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEe
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR---PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCT   88 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~---~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~   88 (180)
                      .|+|+|.++||.++++|.+..++ |.|. |++||+|..  |+   +||....                 ..+|..  .|+
T Consensus         3 ~d~~~C~~~pC~~~g~C~~~~~~-~~C~-C~~g~~g~~--C~~~~~eC~~~~-----------------~~~C~~--~C~   59 (317)
T 3h5c_B            3 KGGSPCISQPCLHNGSCQDSIWG-YTCT-CSPGYEGSN--CELAKNECHPER-----------------TDGCQH--FCL   59 (317)
T ss_dssp             ---CCTTSCCCTTTCCCCCCSSS-CCCC-CSSSCCSSS--SCCCSSSCCTTC-----------------TTSCSS--EEE
T ss_pred             ccCCcCCCCCCCCCCEeECCCCC-eEEE-CCCCCcCCc--cccCcccCCCCC-----------------CCCCcC--ccc
Confidence            47899999999999999999888 9999 999999753  32   3332210                 035654  899


Q ss_pred             ecCCCceeeCCCCCccCC-CCCccC
Q psy13147         89 VVHHTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        89 ~~~g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      ++.++|.|.|++||.+.. ...|.+
T Consensus        60 ~~~g~~~C~C~~g~~~~~~~~~C~~   84 (317)
T 3h5c_B           60 PGQESYTCSCAQGYRLGEDHKQCVP   84 (317)
T ss_dssp             CCSSSCEEECCTTEECCTTSSCCEE
T ss_pred             cCCCeeEEecccccccccccccccc
Confidence            999999999999998864 236766

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.91  E-value=8.2e-11  Score=85.46  Aligned_cols=94  Identities=23%  Similarity=0.395  Sum_probs=61.2

Q ss_pred             cCCCc--cCCCCCCeEeecCCCceeeCCCCCccCC-CCCccCCCCCCCCCCC--CCC--CCC--CCCCeeeecCC----c
Q psy13147         74 RDPCQ--GTCGVNALCTVVHHTPACYCPQGTIGNP-YEHCATPLAPVPPPNP--CDH--VYC--GSNAVCKHTNG----I  140 (180)
Q Consensus        74 ~~~C~--~~C~~~~~C~~~~g~~~C~C~~g~~g~~-~~~C~~~~~~~~~~d~--C~~--~~C--~~~~~C~~~~g----~  140 (180)
                      +|||.  .+|. +++|+++.++|+|.|++||++.+ ...|++      + ++  |..  .+|  ..++.|+++.+    +
T Consensus         3 ideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d------~-~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~   74 (162)
T 1uzk_A            3 VNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVD------T-RSGNCYLDIRPRGDNGDTACSNEIGVGVSK   74 (162)
T ss_dssp             CCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEEC------C-CCEEEEEEC----------CEEEEEEEECH
T ss_pred             cccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccC------C-CCCcccCCCcccCCCCCCcccCCcCCcccC
Confidence            45663  4686 68999999999999999998643 228987      4 76  743  344  24678988776    6


Q ss_pred             eeeecCCCCc---------------------------cCCcC-CC--ccCCcCC-CCCCCCCcccCC
Q psy13147        141 VTCECLPTYY---------------------------GNGAL-GC--RPECVLN-TDCPNSAACINN  176 (180)
Q Consensus       141 ~~C~C~~G~~---------------------------g~~~~-~C--~deC~~~-~~C~~~~~C~n~  176 (180)
                      |+|.|++||.                           ++... .|  ||||... ++|. +++|+|+
T Consensus        75 ~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~-~g~C~n~  140 (162)
T 1uzk_A           75 ASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ-GGKCINT  140 (162)
T ss_dssp             HHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGB-TSEEEEC
T ss_pred             ceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcC-CCEeEcC
Confidence            7777777665                           33211 23  6799875 6786 4789886

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.83  E-value=6.6e-10  Score=75.36  Aligned_cols=69  Identities=25%  Similarity=0.514  Sum_probs=28.0

Q ss_pred             CCCCCCC--CCCCCCCeeeecCCCeeecCCCCCCCcCC-CCCCCCCCCCCCCCCCCCcccCCcccCCCc--cCCCCCCeE
Q psy13147         13 DSLACKP--NPCDPYSSCSVYSEHVAMCDPCSGPQAPW-LPHCRPECLCNSDCPFNMACLGQKCRDPCQ--GTCGVNALC   87 (180)
Q Consensus        13 d~~~C~~--~~C~~~~~C~~~~~~~~~C~~C~~G~~g~-~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~--~~C~~~~~C   87 (180)
                      |++||..  ..|.  ++|+++.++ |.|. |++||+|. +..|++                   +|||.  .+|.  ++|
T Consensus        28 d~neC~~~~~~C~--~~C~n~~g~-y~C~-C~~Gy~g~~g~~C~d-------------------ideC~~~~~C~--~~C   82 (107)
T 2w2n_E           28 GTNECLDNNGGCS--YVCNDLKIG-YECL-CPDGFQLVAQRRCED-------------------IDECQDPDTCS--QLC   82 (107)
T ss_dssp             SCCGGGTGGGGCS--SEEECCSBS-CEEE-CCTTCEEETTTEEEC-----------------------------------
T ss_pred             cCccCcCCCCCCC--CEeEeCCCC-eEEE-CCCCccccCCCcccc-------------------ccccCCCCCcC--Cee
Confidence            6777773  3563  699999998 9999 99999984 334431                   24442  3564  689


Q ss_pred             eecCCCceeeCCCCCccCC
Q psy13147         88 TVVHHTPACYCPQGTIGNP  106 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~  106 (180)
                      +++.++|.|.|++||.++.
T Consensus        83 ~n~~gsy~C~C~~Gy~~~~  101 (107)
T 2w2n_E           83 VNLEGGYKCQCEEGFQLDP  101 (107)
T ss_dssp             -------------------
T ss_pred             ecCCCCEEEECCCCceECC
Confidence            9999999999999998764

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.80  E-value=4.6e-09  Score=86.46  Aligned_cols=65  Identities=20%  Similarity=0.522  Sum_probs=53.5

Q ss_pred             CCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         80 TCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        80 ~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ++...+.|+++.++|.|.|++||.+.....|++      + |||. +.+|..  .|+++.|+|.|.|.+||.++.
T Consensus         7 ~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~d------i-deC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~   72 (400)
T 3p5b_L            7 NGGCSHVCNDLKIGYECLCPDGFQLVAQRRCED------I-DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDP   72 (400)
T ss_dssp             GGGCSSEEEECSSSEEEECCTTEEECSSSCEEE------C-CCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCCT
T ss_pred             CCCCCCEeECCCCCeEEECCCCCCcCCCCcccC------c-hhhhccCCCCC--ccCCCccceeeeccccccccc
Confidence            344457999999999999999998633338988      4 9996 578864  999999999999999998764

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.73  E-value=1.9e-10  Score=82.21  Aligned_cols=94  Identities=23%  Similarity=0.493  Sum_probs=60.2

Q ss_pred             cCCCc-cCCCCCCeEeecCCCceeeCCCCCccCCC-CCccCCCCCCCCC-C---------CCC--CCCCCCCCeeeecCC
Q psy13147         74 RDPCQ-GTCGVNALCTVVHHTPACYCPQGTIGNPY-EHCATPLAPVPPP-N---------PCD--HVYCGSNAVCKHTNG  139 (180)
Q Consensus        74 ~~~C~-~~C~~~~~C~~~~g~~~C~C~~g~~g~~~-~~C~~~~~~~~~~-d---------~C~--~~~C~~~~~C~~~~g  139 (180)
                      +|||. ++|. +++|+++.++|+|.|++||+++.. ..|++      +. .         .|.  ...|..++.|.+..+
T Consensus         4 ideC~~~pC~-ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~------~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g   76 (147)
T 2w86_A            4 IDECESSPCI-NGVCKNSPGSFICECSSESTLDPTKTICIE------TIKGTCWQTVIDGRCEININGATLKSQCCSSLG   76 (147)
T ss_dssp             CCGGGGCCSB-TSEEEEETTEEEEECCTTEEECTTSSBEEE------CCCEEEEEEEETTEEEEEEEEEECHHHHHTTTC
T ss_pred             CccCcCCCCC-CCEeECCCCCEEeECCCCcccCCCCCeecC------CCCCcccCCCCCCccccCCCccccCCccccCcC
Confidence            46663 5786 479999999999999999998642 25654      21 0         121  011212223344443


Q ss_pred             c----------eeeecCCCCcc-CCcCCC--ccCCcCC-CCCCCCCcccCC
Q psy13147        140 I----------VTCECLPTYYG-NGALGC--RPECVLN-TDCPNSAACINN  176 (180)
Q Consensus       140 ~----------~~C~C~~G~~g-~~~~~C--~deC~~~-~~C~~~~~C~n~  176 (180)
                      +          |.|.|++||++ ++. .|  +|||... +.|. +++|+|+
T Consensus        77 ~~~g~~C~~c~~~C~C~~Gy~~~~g~-~C~dideC~~~~~~C~-~g~C~n~  125 (147)
T 2w86_A           77 AAWGSPCTLCQVDPICGKGYSRIKGT-QCEDIDECEVFPGVCK-NGLCVNT  125 (147)
T ss_dssp             SEETTTTEECCCCTTTCTTEEEEETT-EEEECCHHHHSTTCSS-SSEEEEE
T ss_pred             cccCCCcccCCCcccCCCccccCCCC-ccCccccccCCCCCCC-CCEEECC
Confidence            3          78899999975 233 45  6899975 6797 4689885

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.64  E-value=2.6e-08  Score=65.45  Aligned_cols=68  Identities=21%  Similarity=0.467  Sum_probs=49.6

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCC-ccCCCCCCeEeecC
Q psy13147         13 DSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPC-QGTCGVNALCTVVH   91 (180)
Q Consensus        13 d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C-~~~C~~~~~C~~~~   91 (180)
                      ++++|...||.      +..++ |+|. |++||+    .|..   .              -+++| ..+|.++++|++..
T Consensus        16 ~~~~c~~~pC~------n~~~~-y~C~-C~~G~~----~C~~---~--------------~~~~C~~~pC~ngg~C~~~~   66 (91)
T 1tpg_A           16 QQHQSWLRPVL------RSNRV-EYCW-CNSGRA----QCHS---V--------------PVKSCSEPRCFNGGTCQQAL   66 (91)
T ss_dssp             CSSCEEEEECS------SSSCE-EEEE-CSSSCC----BCCE---E--------------CEEECSSCCSCTTCEEEEES
T ss_pred             CCCcccCCccc------cCCCC-cEeE-CCCCCc----cccc---C--------------cCCcccCCCCCCCCEeecCC
Confidence            57788766664      34556 9999 999996    3320   0              02344 24688889999987


Q ss_pred             --CCceeeCCCCCccCCCCCccC
Q psy13147         92 --HTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        92 --g~~~C~C~~g~~g~~~~~C~~  112 (180)
                        ++|.|.|++||.|.   .|+.
T Consensus        67 ~~~~~~C~C~~G~~G~---~Ce~   86 (91)
T 1tpg_A           67 YFSDFVCQCPEGFAGK---SCEI   86 (91)
T ss_dssp             SSSCEEEECCTTCBSS---SCCB
T ss_pred             CCCCeEeECCCCCcCC---cCCc
Confidence              89999999999998   8874

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.63  E-value=2.8e-08  Score=54.75  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=32.1

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +|+|+|.++||.++++|++..++ |+|. |++||+|.
T Consensus         1 ~d~d~C~~~pC~ngg~C~~~~~~-~~C~-C~~G~~G~   35 (39)
T 1edm_B            1 VDGDQCESNPCLNGGSCKDDINS-YECW-CPFGFEGK   35 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEEETTE-EEEE-CCTTCCST
T ss_pred             CccccCCCCCCCCCCEeEcCCCc-eEeE-CCCCCcCC
Confidence            47899999999999999999888 9999 99999985

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.58  E-value=9.6e-08  Score=79.33  Aligned_cols=113  Identities=22%  Similarity=0.600  Sum_probs=71.2

Q ss_pred             CCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCc--cCCCCCCeEeecCCCceee
Q psy13147         20 NPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQ--GTCGVNALCTVVHHTPACY   97 (180)
Q Consensus        20 ~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~--~~C~~~~~C~~~~g~~~C~   97 (180)
                      .+|.++++|.+  +. +.|. |++||+|..  |...|..+.        ....|.++|.  +.|..++.|.  .+.|.|.
T Consensus       203 ~~C~~~G~C~~--~~-g~C~-C~~G~~G~~--Ce~~C~~g~--------~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~  266 (423)
T 2gy5_A          203 TACMNNGVCHE--DT-GECI-CPPGFMGRT--CEKACELHT--------FGRTCKERCSGQEGCKSYVFCL--PDPYGCS  266 (423)
T ss_dssp             CCCCTTCEECT--TT-CCEE-CCTTEESTT--SCEECCTTE--------ESTTSCEECCSTTTTTTCCEEE--TTTTEEE
T ss_pred             CCCCCCCEEEC--CC-CcEe-CCCCccCCC--cccccCCCC--------CCCCcCccCCCCCCCCCCCEEC--CCCCeEE
Confidence            38999999986  45 7999 999999864  332222210        0011223342  4577778884  5789999


Q ss_pred             CCCCCccCCCCCccCCCCCCCCCCCCC-CCCCCCCCeeeecCCceeeecCCCCccCCc
Q psy13147         98 CPQGTIGNPYEHCATPLAPVPPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNGA  154 (180)
Q Consensus        98 C~~g~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  154 (180)
                      |++||.|.   .|+..=.+-..-+.|. .-+|.+++.|.+..+   |.|++||.|...
T Consensus       267 C~~G~~G~---~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~---C~C~~G~~G~~C  318 (423)
T 2gy5_A          267 CATGWKGL---QCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG---CLCSPGWQGLQC  318 (423)
T ss_dssp             CCBTCBSG---GGCBCCCTTBCSBTTCCBCCCTTCCEEETTTE---EECCTTCBSTTS
T ss_pred             eCCCcccc---cccCccCCCCcCCcccccccCCCCCEecCCCc---eECCCCCcCCCC
Confidence            99999987   6643000000002232 126888899987643   999999998743

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.57  E-value=3.6e-08  Score=81.13  Aligned_cols=75  Identities=23%  Similarity=0.422  Sum_probs=55.8

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC-CCCCC--CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecC
Q psy13147         15 LACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW-LPHCR--PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVH   91 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~-~~~C~--~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~   91 (180)
                      |||..+++...+.|++++++ |.|. |++||++. +..|+  +||...                   .+|.  ..|+++.
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~-y~C~-C~~G~~~~~~~~C~dideC~~~-------------------~~C~--~~C~n~~   57 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIG-YECL-CPDGFQLVAQRRCEDIDECQDP-------------------DTCS--QLCVNLE   57 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSS-EEEE-CCTTEEECSSSCEEECCCCSTT-------------------SSCS--SCCBCCS
T ss_pred             CcccCCCCCCCCEeECCCCC-eEEE-CCCCCCcCCCCcccCchhhhcc-------------------CCCC--CccCCCc
Confidence            58887777777899999999 9999 99999863 34453  344321                   2454  3789999


Q ss_pred             CCceeeCCCCCccCCC-CCccC
Q psy13147         92 HTPACYCPQGTIGNPY-EHCAT  112 (180)
Q Consensus        92 g~~~C~C~~g~~g~~~-~~C~~  112 (180)
                      ++|.|.|.+||.+... ..|..
T Consensus        58 g~~~C~C~~g~~~~~~~~~C~~   79 (400)
T 3p5b_L           58 GGYKCQCEEGFQLDPHTKACKA   79 (400)
T ss_dssp             SSCBCCCCTTCCCCTTTSSCCC
T ss_pred             cceeeeccccccccccccceee
Confidence            9999999999987642 25654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.56  E-value=2.1e-07  Score=81.81  Aligned_cols=60  Identities=20%  Similarity=0.530  Sum_probs=50.7

Q ss_pred             CeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +.|+++.++|+|.|++||.+.....|++      + |||. +.+|.  +.|+|+.|+|+|.|++||.+..
T Consensus       306 ~~C~~~~~~~~C~C~~G~~~~~~~~C~d------i-deC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~~  366 (699)
T 1n7d_A          306 HVCNDLKIGYECLCPDGFQLVAQRRCED------I-DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDP  366 (699)
T ss_dssp             TTCCCCTTCCCCCCCSSSCCCSSSCCCC------C-CCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCCS
T ss_pred             CCcccCCCCcEEeCCCCeEcCCCCcccC------c-cccCCCCccc--cccccCCCCeeeeeecccccCC
Confidence            5789999999999999998633338988      4 9996 57785  5899999999999999999754

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.48  E-value=2.8e-07  Score=82.01  Aligned_cols=60  Identities=20%  Similarity=0.530  Sum_probs=50.0

Q ss_pred             CeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC-CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ..|+++.++|.|.|++||.+.....|++      + |||. +.+|.  +.|+|+.|+|+|.|++||.++.
T Consensus       324 ~~C~~~~~~y~C~C~~Gy~l~~g~~C~d------i-deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l~~  384 (791)
T 3m0c_C          324 HVCNDLKIGYECLCPDGFQLVAQRRCED------I-DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDP  384 (791)
T ss_dssp             SEEEECSBSEEEECCTTCEEETTTEEEC------C-CCCSSSSSCT--TTCCBCSSCBCCCCCSSEECCS
T ss_pred             ccccCCCCCcccCCCCCCccCCCCcccc------C-cccCCCCCCC--CeeecCCCCceeecCCCCEeCC
Confidence            4899999999999999997632238998      4 9996 46674  5899999999999999998743

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.48  E-value=3.5e-08  Score=58.56  Aligned_cols=39  Identities=10%  Similarity=0.123  Sum_probs=31.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCeee-----ecCCCeeecCCCCCCCcCC
Q psy13147          8 PYPSNDSLACKPNPCDPYSSCS-----VYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus         8 ~~~~~d~~~C~~~~C~~~~~C~-----~~~~~~~~C~~C~~G~~g~   48 (180)
                      +...+++|||+++||+++++|.     +..++ |+|. |++||+|.
T Consensus         2 ~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~-y~C~-C~~g~~G~   45 (55)
T 3u7u_G            2 TSHLVKCAEKEKTFCVNGGECFMVKDLSNPSR-YLCK-CPNEFTGD   45 (55)
T ss_dssp             -CCEEECCSTTTTTSCTTCEEEEECCC--CCC-EEEE-ECTTEEST
T ss_pred             CCCcccCCCCcCCCCCCCCCcCCCCccCCCCC-EeEe-CCCCCcCC
Confidence            4556789999999999999995     44556 9999 99999985

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.47  E-value=2.3e-07  Score=77.02  Aligned_cols=90  Identities=27%  Similarity=0.627  Sum_probs=56.8

Q ss_pred             CCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCC----CCCCCCC-CCCCCCCCeeeecCCceeeecCCCCccCCc
Q psy13147         80 TCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPV----PPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNGA  154 (180)
Q Consensus        80 ~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~----~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  154 (180)
                      +|..+++|.+  +.+.|.|++||.|.   .|+..-..-    .-.++|. ..+|..++.|.  .++|.|.|++||.|...
T Consensus       204 ~C~~~G~C~~--~~g~C~C~~G~~G~---~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C  276 (423)
T 2gy5_A          204 ACMNNGVCHE--DTGECICPPGFMGR---TCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQC  276 (423)
T ss_dssp             CCCTTCEECT--TTCCEECCTTEEST---TSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGG
T ss_pred             CCCCCCEEEC--CCCcEeCCCCccCC---CcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccccc
Confidence            5777888876  56899999999998   675300000    0002343 35677778884  67899999999998643


Q ss_pred             CC-Cc-----cCCcCCCCCCCCCcccCC
Q psy13147        155 LG-CR-----PECVLNTDCPNSAACINN  176 (180)
Q Consensus       155 ~~-C~-----deC~~~~~C~~~~~C~n~  176 (180)
                      .. |.     +.|...-+|.++++|.+.
T Consensus       277 ~~~C~~G~~G~~C~~~C~C~ngg~C~~~  304 (423)
T 2gy5_A          277 NEACHPGFYGPDCKLRCSCNNGEMCDRF  304 (423)
T ss_dssp             CBCCCTTBCSBTTCCBCCCTTCCEEETT
T ss_pred             cCccCCCCcCCcccccccCCCCCEecCC
Confidence            21 21     133322257777778764

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.45  E-value=2.5e-07  Score=50.82  Aligned_cols=33  Identities=21%  Similarity=0.486  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      +|+|.+.||.+++.|+++.++|+|.|++||.|.
T Consensus         3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~   35 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             cccCCCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence            489988999999999999999999999999886

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.44  E-value=4.4e-08  Score=80.12  Aligned_cols=78  Identities=21%  Similarity=0.441  Sum_probs=18.3

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC--CCCCCCCCCCCCCCCCCCcccCCcccCCCc--cCCCCCCeE
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW--LPHCRPECLCNSDCPFNMACLGQKCRDPCQ--GTCGVNALC   87 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~--~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~--~~C~~~~~C   87 (180)
                      +|+|+|..+++...+.|.+..++ |.|. |++||++.  +..|.+                   ++||.  .+|..  .|
T Consensus         1 ~~~~~C~~~~~~c~~~C~~~~g~-~~C~-C~~G~~l~~~~~~C~d-------------------~~eC~~~~~C~~--~C   57 (386)
T 3v65_B            1 TGEENCNVNNGGCAQKCQMIRGA-VQCT-CHTGYRLTEDGRTCQD-------------------VNECAEEGYCSQ--GC   57 (386)
T ss_dssp             ------------------------------------------------------------------------CCTT--EE
T ss_pred             CCcCcccCCCCCCCCCCcCCCCC-cEeE-CCCCceECCCCCccCc-------------------cceeCCcCcccC--cC
Confidence            47899987665545699988888 9999 99999853  344531                   23332  35653  49


Q ss_pred             eecCCCceeeCCCCCccCC-CCCccC
Q psy13147         88 TVVHHTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      +++.++|.|.|.+||...+ ...|+.
T Consensus        58 ~~~~g~~~C~C~~g~~l~~d~~~C~~   83 (386)
T 3v65_B           58 TNSEGAFQCWCEAGYELRPDRRSCKA   83 (386)
T ss_dssp             C-----CCEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCCeEEECCCceEcCCCCeECC
Confidence            9999999999999998543 226754

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.40  E-value=5.4e-08  Score=79.60  Aligned_cols=59  Identities=24%  Similarity=0.569  Sum_probs=16.2

Q ss_pred             CeEeecCCCceeeCCCCCccCC-CCCccCCCCCCCCCCCCC-CCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNP-YEHCATPLAPVPPPNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~-~~~C~~~~~~~~~~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ..|.+..++|.|.|++||.+.+ ...|++       +|||. ..+|..  .|+++.|+|.|.|++||...
T Consensus        15 ~~C~~~~g~~~C~C~~G~~l~~~~~~C~d-------~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~l~   75 (386)
T 3v65_B           15 QKCQMIRGAVQCTCHTGYRLTEDGRTCQD-------VNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELR   75 (386)
T ss_dssp             --------------------------------------------CCTT--EEC-----CCEECCTTEEEC
T ss_pred             CCCcCCCCCcEeECCCCceECCCCCccCc-------cceeCCcCcccC--cCCCCCCCCeEEECCCceEc
Confidence            4888888999999999998432 128987       49996 578964  59999999999999999854

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.32  E-value=2.5e-07  Score=80.86  Aligned_cols=113  Identities=25%  Similarity=0.584  Sum_probs=73.5

Q ss_pred             CCCCCCeeeecCCCeeecCCCC------CCCcCCCCCC-CCCCCCCCCCCCCCcccCCcccCCCccCCCC--CCeEeecC
Q psy13147         21 PCDPYSSCSVYSEHVAMCDPCS------GPQAPWLPHC-RPECLCNSDCPFNMACLGQKCRDPCQGTCGV--NALCTVVH   91 (180)
Q Consensus        21 ~C~~~~~C~~~~~~~~~C~~C~------~G~~g~~~~C-~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~--~~~C~~~~   91 (180)
                      +|.+++.|..     .+|. |+      +||+|..-.+ ...|....                 ...|..  +++|..  
T Consensus       483 ~Cs~~G~C~~-----G~C~-C~~~~~~~~G~~G~~Ce~~~~~C~~~~-----------------~~~C~~~~~G~C~~--  537 (687)
T 3k6s_B          483 ICSGLGDCVC-----GQCL-CHTSDVPGKLIYGQYCECDTINCERYN-----------------GQVCGGPGRGLCFC--  537 (687)
T ss_dssp             GGGSSEEEET-----TEEE-ECCCCSTTCCEESTTSCEESSCSCEET-----------------TEETSHHHHEEEET--
T ss_pred             cCCCCCEEeC-----CEEE-cCCCCCCCCCccccccccccccccCCC-----------------CcCcCCCCCCeEEC--
Confidence            5888999983     3899 99      9999864211 12221100                 024766  788874  


Q ss_pred             CCceeeCCCCCccCCCCCccCCCCCCCCCCCCCC---CCCCCCCeeeecCCceeeecCCCCccCCcCCCccCCcCCCCCC
Q psy13147         92 HTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDH---VYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRPECVLNTDCP  168 (180)
Q Consensus        92 g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~deC~~~~~C~  168 (180)
                        ..|.|.+||+|.   .|+-   .. ..+.|..   .+|..++.|..    ..|.|++||.|.....| +.|.  ++|.
T Consensus       538 --g~C~C~~G~~G~---~Cec---~~-~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~c-~~C~--~~C~  601 (687)
T 3k6s_B          538 --GKCRCHPGFEGS---ACQC---ER-TTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQEC-PGCP--SPCG  601 (687)
T ss_dssp             --TEEEECTTCCST---TSCS---CC-SSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCCTTTTCCC-TTSC--CCCT
T ss_pred             --CEEEcCCCCcCC---CCcc---CC-CCCCCCCCCCCCCCCCCcCCC----CEEECCCCCcCCCCCCC-CCCC--cccC
Confidence              389999999998   7762   00 1367854   37988999986    47999999999854322 2443  3565


Q ss_pred             CCCccc
Q psy13147        169 NSAACI  174 (180)
Q Consensus       169 ~~~~C~  174 (180)
                      .++.|+
T Consensus       602 ~~g~Cv  607 (687)
T 3k6s_B          602 KYISCA  607 (687)
T ss_dssp             TTHHHH
T ss_pred             CCCCCC
Confidence            555554

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.29  E-value=5.6e-07  Score=78.64  Aligned_cols=130  Identities=21%  Similarity=0.511  Sum_probs=82.6

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCC-CccCCCCCCeEeecCCCceee
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDP-CQGTCGVNALCTVVHHTPACY   97 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~-C~~~C~~~~~C~~~~g~~~C~   97 (180)
                      +.+|..+++|.    . ..|. |.+||+|..-.|..    +..   ........|... -...|..++.|+.    ..|.
T Consensus       434 s~~Cs~~G~C~----~-g~C~-C~~Gy~G~~Cec~~----~~~---~~~~~~~~C~~~~~~~~Cs~~G~C~~----G~C~  496 (687)
T 3k6s_B          434 RSLCHGKGFLE----C-GICR-CDTGYIGKNCECQT----QGR---SSQELEGSCRKDNNSIICSGLGDCVC----GQCL  496 (687)
T ss_dssp             SSTGGGSEEES----S-SSEE-ECSSEESTTSCEES----SSC---CCSGGGSTTSSSTTSCGGGSSEEEET----TEEE
T ss_pred             CCCCCCCCEEe----C-CEeE-cCCCCcCCcccccC----CcC---CccccCCCCCCCCCCCcCCCCCEEeC----CEEE
Confidence            45777777776    2 5799 99999996422210    000   000000011100 0124777889983    3899


Q ss_pred             CC------CCCccCCCCCccCCCCCCCCCCCCCC---CCCCC--CCeeeecCCceeeecCCCCccCCcCCC---ccCCcC
Q psy13147         98 CP------QGTIGNPYEHCATPLAPVPPPNPCDH---VYCGS--NAVCKHTNGIVTCECLPTYYGNGALGC---RPECVL  163 (180)
Q Consensus        98 C~------~g~~g~~~~~C~~~~~~~~~~d~C~~---~~C~~--~~~C~~~~g~~~C~C~~G~~g~~~~~C---~deC~~  163 (180)
                      |.      +||.|.   .|+.      ..+.|..   .+|..  ++.|..  |  .|.|++||.|.... |   .++|..
T Consensus       497 C~~~~~~~~G~~G~---~Ce~------~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~G~~Ce-c~~~~~~C~~  562 (687)
T 3k6s_B          497 CHTSDVPGKLIYGQ---YCEC------DTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFEGSACQ-CERTTEGCLN  562 (687)
T ss_dssp             ECCCCSTTCCEEST---TSCE------ESSCSCEETTEETSHHHHEEEET--T--EEEECTTCCSTTSC-SCCSSCTTBC
T ss_pred             cCCCCCCCCCcccc---cccc------ccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCcCCCCc-cCCCCCCCCC
Confidence            99      999998   8863      2367852   46887  889984  2  89999999998653 2   357775


Q ss_pred             C--CCCCCCCcccCCccc
Q psy13147        164 N--TDCPNSAACINNSII  179 (180)
Q Consensus       164 ~--~~C~~~~~C~n~~~~  179 (180)
                      .  .+|..++.|++..|+
T Consensus       563 ~~g~~Cs~~G~C~~g~C~  580 (687)
T 3k6s_B          563 PRRVECSGRGRCRCNVCE  580 (687)
T ss_dssp             TTCSBTSSSCCBCSSCBC
T ss_pred             CCCCCCCCCCcCCCCEEE
Confidence            3  578888888877663

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.16  E-value=1.1e-06  Score=52.02  Aligned_cols=34  Identities=15%  Similarity=0.453  Sum_probs=29.1

Q ss_pred             CCCCCCCCCCCCCee-----eecCCceeeecCCCCccCC
Q psy13147        120 PNPCDHVYCGSNAVC-----KHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C-----~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||.++||.++++|     ++..++|+|.|++||.|..
T Consensus         8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~   46 (55)
T 3u7u_G            8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDR   46 (55)
T ss_dssp             CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTT
T ss_pred             CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCC
Confidence            599999999999999     4667899999999999974

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.15  E-value=2.9e-07  Score=55.72  Aligned_cols=36  Identities=28%  Similarity=0.673  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCCCCC--CeeeecCCCeeecCCCCCCCc-CC
Q psy13147         11 SNDSLACKPNPCDPY--SSCSVYSEHVAMCDPCSGPQA-PW   48 (180)
Q Consensus        11 ~~d~~~C~~~~C~~~--~~C~~~~~~~~~C~~C~~G~~-g~   48 (180)
                      .+++|+|.++||.++  ++|+++.++ |.|. |++||+ |.
T Consensus         8 ~~~~d~C~snPC~nga~gtC~~~~g~-y~C~-C~~Gy~~G~   46 (61)
T 2k2s_B            8 SETPAACSSNPCGPEAAGTCKETNSG-YICR-CNQGYRISL   46 (61)
T ss_dssp             TTSCCHHHHCSSCSSSCCEEEECSSE-EEEE-CCTTEEEEE
T ss_pred             cCCCCcCcCCCCcCCCccccccCCCc-eEeE-CCCCCccCC
Confidence            567899999999988  799999888 9999 999999 74

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.14  E-value=1.2e-06  Score=51.56  Aligned_cols=34  Identities=15%  Similarity=0.222  Sum_probs=29.9

Q ss_pred             CCCCCCCC---CCCCCCeee--ecCCCeeecCCCCCCCcCC
Q psy13147         13 DSLACKPN---PCDPYSSCS--VYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        13 d~~~C~~~---~C~~~~~C~--~~~~~~~~C~~C~~G~~g~   48 (180)
                      |+++|.++   ||.++++|+  +..++ |.|. |++||+|.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~-~~C~-C~~G~~G~   40 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDS-YTCN-CVIGYSGD   40 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSC-EEEE-CCTTCCSS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCC-EEEE-CCCCCcCC
Confidence            67899876   999999999  67777 9999 99999985

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.13  E-value=1.8e-06  Score=76.96  Aligned_cols=75  Identities=24%  Similarity=0.486  Sum_probs=52.4

Q ss_pred             CCCCCCCCCCC-----CeeeecCCCeeecCCCCCCCcC-CCCCCC--CCCCCCCCCCCCCcccCCcccCCCccCCCCCCe
Q psy13147         15 LACKPNPCDPY-----SSCSVYSEHVAMCDPCSGPQAP-WLPHCR--PECLCNSDCPFNMACLGQKCRDPCQGTCGVNAL   86 (180)
Q Consensus        15 ~~C~~~~C~~~-----~~C~~~~~~~~~C~~C~~G~~g-~~~~C~--~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~   86 (180)
                      ++|..++|..+     +.|+++.++ |.|. |++||.+ ++..|.  +||...                   ..|.  ..
T Consensus       308 ~~C~~~~C~~~~~~C~~~C~~~~~~-y~C~-C~~Gy~l~~g~~C~dideC~~~-------------------~~C~--~~  364 (791)
T 3m0c_C          308 KECGTNECLDNNGGCSHVCNDLKIG-YECL-CPDGFQLVAQRRCEDIDECQDP-------------------DTCS--QL  364 (791)
T ss_dssp             TTBSCCSTTTGGGGCSSEEEECSBS-EEEE-CCTTCEEETTTEEECCCCCSSS-------------------SSCT--TT
T ss_pred             cccccccccccccCccccccCCCCC-cccC-CCCCCccCCCCccccCcccCCC-------------------CCCC--Ce
Confidence            34555556543     389999998 9999 9999986 344553  344321                   2343  57


Q ss_pred             EeecCCCceeeCCCCCccCCC-CCccC
Q psy13147         87 CTVVHHTPACYCPQGTIGNPY-EHCAT  112 (180)
Q Consensus        87 C~~~~g~~~C~C~~g~~g~~~-~~C~~  112 (180)
                      |+++.++|.|.|.+||.+... ..|+.
T Consensus       365 C~n~~gsy~C~C~~Gy~l~~~~~~C~~  391 (791)
T 3m0c_C          365 CVNLEGGYKCQCEEGFQLDPHTKACKA  391 (791)
T ss_dssp             CCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred             eecCCCCceeecCCCCEeCCCCceeee
Confidence            999999999999999987542 26765

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.12  E-value=4.8e-06  Score=51.93  Aligned_cols=37  Identities=24%  Similarity=0.357  Sum_probs=31.4

Q ss_pred             CCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         12 NDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        12 ~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      +|||||.  .++|..+++|+|+.++ |+|..+..||.++.
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gs-y~C~~~~~g~~~~~   39 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGG-YLCLPRSAAVINDL   39 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCC-EEEEETTSCCCSCC
T ss_pred             CccccccCCCCCCCCCCEeECCCCC-eEecccCCcccccc
Confidence            4899998  4789888999999999 99986778998764

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.07  E-value=4e-06  Score=73.62  Aligned_cols=75  Identities=23%  Similarity=0.484  Sum_probs=51.8

Q ss_pred             CCCCCCC--CCCCCCCeeeecCCCeeecCCCCCCCcCC-CCCCC--CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeE
Q psy13147         13 DSLACKP--NPCDPYSSCSVYSEHVAMCDPCSGPQAPW-LPHCR--PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALC   87 (180)
Q Consensus        13 d~~~C~~--~~C~~~~~C~~~~~~~~~C~~C~~G~~g~-~~~C~--~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C   87 (180)
                      +++||..  ..|  .+.|+++.++ |+|. |++||++. +..|.  +||...                   .+|.  ..|
T Consensus       293 ~~~eC~~~~~~C--~~~C~~~~~~-~~C~-C~~G~~~~~~~~C~dideC~~~-------------------~~C~--~~C  347 (699)
T 1n7d_A          293 GTNECLDNNGGC--SHVCNDLKIG-YECL-CPDGFQLVAQRRCEDIDECQDP-------------------DTCS--QLC  347 (699)
T ss_dssp             CCCCTTSSTTTS--CTTCCCCTTC-CCCC-CCSSSCCCSSSCCCCCCCCSSS-------------------SSCT--TTC
T ss_pred             ccccccccccCc--CCCcccCCCC-cEEe-CCCCeEcCCCCcccCccccCCC-------------------Cccc--ccc
Confidence            3556653  234  3689999998 9999 99999973 34453  344321                   2453  478


Q ss_pred             eecCCCceeeCCCCCccCCC-CCccC
Q psy13147         88 TVVHHTPACYCPQGTIGNPY-EHCAT  112 (180)
Q Consensus        88 ~~~~g~~~C~C~~g~~g~~~-~~C~~  112 (180)
                      +++.++|+|.|.+||.+... ..|..
T Consensus       348 ~n~~g~y~C~C~~G~~~~~~~~~C~~  373 (699)
T 1n7d_A          348 VNLEGGYKCQCEEGFQLDPHTKACKA  373 (699)
T ss_dssp             CBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred             ccCCCCeeeeeecccccCCCCCcccc
Confidence            99999999999999987542 25654

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.99  E-value=1.6e-06  Score=52.40  Aligned_cols=33  Identities=33%  Similarity=0.728  Sum_probs=30.3

Q ss_pred             CCCCCCCCCCCC--CeeeecCCceeeecCCCCc-cC
Q psy13147        120 PNPCDHVYCGSN--AVCKHTNGIVTCECLPTYY-GN  152 (180)
Q Consensus       120 ~d~C~~~~C~~~--~~C~~~~g~~~C~C~~G~~-g~  152 (180)
                      +|+|.++||.++  ++|+++.++|.|.|++||. |.
T Consensus        11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~   46 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL   46 (61)
T ss_dssp             CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE
T ss_pred             CCcCcCCCCcCCCccccccCCCceEeECCCCCccCC
Confidence            489988999988  7999999999999999998 85

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.93  E-value=5.8e-06  Score=48.26  Aligned_cols=34  Identities=21%  Similarity=0.399  Sum_probs=28.8

Q ss_pred             CCCCCCCC----------CCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         12 NDSLACKP----------NPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        12 ~d~~~C~~----------~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      +|||||..          .+|.  ++|+|+.++ |.|. |++||++..
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gs-y~C~-C~~Gy~~~~   45 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGG-YFCS-CRPGYELQE   45 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTE-EEEE-CSTTCEECT
T ss_pred             CccccccCcccccccccCCCCC--CEeECCCCC-eEEE-CCCCCeECC
Confidence            58999984          5785  599999999 9999 999999753

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.91  E-value=9.1e-06  Score=47.62  Aligned_cols=34  Identities=29%  Similarity=0.672  Sum_probs=29.7

Q ss_pred             CCCCCCC---CCCCCCeee--ecCCceeeecCCCCccCC
Q psy13147        120 PNPCDHV---YCGSNAVCK--HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~g~~  153 (180)
                      +++|.+.   ||.++++|+  +..++|+|.|++||+|..
T Consensus         3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   41 (53)
T 1egf_A            3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDR   41 (53)
T ss_dssp             ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSS
T ss_pred             cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCc
Confidence            3888765   999999999  789999999999999863

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.91  E-value=9e-06  Score=50.66  Aligned_cols=34  Identities=18%  Similarity=0.231  Sum_probs=27.1

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeee-cCCCCccCC
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCE-CLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~-C~~G~~g~~  153 (180)
                      +|||.  .++|..++.|+|++|+|+|. +..||.++.
T Consensus         3 idEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~   39 (71)
T 2kl7_A            3 VNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDL   39 (71)
T ss_dssp             SCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCC
T ss_pred             cccccCCCCCCCCCCEeECCCCCeEecccCCcccccc
Confidence            49996  36798889999999999998 445777654

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.88  E-value=5.8e-06  Score=62.61  Aligned_cols=104  Identities=20%  Similarity=0.470  Sum_probs=66.9

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC-CCCCCCCCCCCCCcccCCcccCCC-ccCCCCCCeEeecCCCcee
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR-PECLCNSDCPFNMACLGQKCRDPC-QGTCGVNALCTVVHHTPAC   96 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~-~~C~~~~~C~~~~~C~~~~C~~~C-~~~C~~~~~C~~~~g~~~C   96 (180)
                      +..|..+++|..     ..|. |.+||+|..-.|. ++..        ..+.+..|.... ..+|..+++|+.    ..|
T Consensus        95 ~~~Csg~G~C~~-----g~C~-C~~G~~G~~Cec~~~~~~--------~~~~~~~C~~~~~~~~Csg~G~C~~----g~C  156 (217)
T 2p28_B           95 RSLCHGKGFLEC-----GICR-CDTGYIGKNCECQTQGRS--------SQELEGSCRKDNNSIICSGLGDCVC----GQC  156 (217)
T ss_dssp             -CTTTTSEEEET-----TEEE-ECTTEESTTSCEECCCCC---------GGGGGGGBSSTTSCBGGGTEEEET----TEE
T ss_pred             CCccCCCceEEC-----CEEE-CCCCccCCcccccCcccc--------cccCCCcCCCCCCCCCCCCCCEEeC----Cce
Confidence            356888889973     4799 9999999752221 1100        000112233221 236777889984    479


Q ss_pred             eCCCC------CccCCCCCccCCCCCCCCCCCCCCC---CCCCC--CeeeecCCceeeecCCCCccCC
Q psy13147         97 YCPQG------TIGNPYEHCATPLAPVPPPNPCDHV---YCGSN--AVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus        97 ~C~~g------~~g~~~~~C~~~~~~~~~~d~C~~~---~C~~~--~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      .|.+|      |.|.   .|+.      ..+.|...   +|..+  ++|..    .+|.|.+||.|..
T Consensus       157 ~C~~gw~~~~~~~G~---~Ce~------~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~  211 (217)
T 2p28_B          157 LCHTSDVPGKLIYGQ---YCEC------DTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSA  211 (217)
T ss_dssp             EECCCCSTTCCEEST---TSCE------ESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTT
T ss_pred             ECCCCCCCcccEECC---Cccc------CCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCC
Confidence            99999      5776   7863      23678543   68777  89985    2899999999873

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.83  E-value=1.8e-05  Score=44.69  Aligned_cols=32  Identities=25%  Similarity=0.512  Sum_probs=26.9

Q ss_pred             CCCCC---CCCCCCeee--ecCCceeeecCCCCccCC
Q psy13147        122 PCDHV---YCGSNAVCK--HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       122 ~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~g~~  153 (180)
                      +|.+.   ||.++++|+  +..++|+|.|++||+|..
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   38 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDR   38 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTT
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCc
Confidence            45555   899999998  678999999999999863

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.81  E-value=1.1e-05  Score=45.51  Aligned_cols=32  Identities=9%  Similarity=0.008  Sum_probs=26.6

Q ss_pred             CCCCCC---CCCCCCeee--ecCCCeeecCCCCCCCcCC
Q psy13147         15 LACKPN---PCDPYSSCS--VYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        15 ~~C~~~---~C~~~~~C~--~~~~~~~~C~~C~~G~~g~   48 (180)
                      ++|.++   ||.++++|+  +..++ |+|. |++||+|.
T Consensus         1 ~~C~~~~~~pC~ngg~C~~~~~~~~-~~C~-C~~G~~G~   37 (45)
T 1a3p_A            1 PGXPSSYDGYCLNGGVXMHIESLDS-YTCN-CVIGYSGD   37 (45)
T ss_dssp             CCCTTCCSSCCSSSCEEEECTTTSS-EEEE-CCTTEETT
T ss_pred             CCcccCCCCCCCCCCEEEeecCCCC-EEEE-cCCCCcCC
Confidence            367766   999999998  55667 9999 99999985

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.81  E-value=2.5e-05  Score=45.48  Aligned_cols=32  Identities=25%  Similarity=0.568  Sum_probs=26.5

Q ss_pred             CCCCCC----------CCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCDH----------VYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~----------~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||..          .+|.  +.|+|++|+|+|.|++||.+..
T Consensus         4 idEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~   45 (53)
T 1apq_A            4 LDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE   45 (53)
T ss_dssp             CCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred             cccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence            488853          5785  4999999999999999998754

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.80  E-value=2.4e-06  Score=66.93  Aligned_cols=42  Identities=17%  Similarity=0.399  Sum_probs=34.0

Q ss_pred             CCCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCC
Q psy13147         11 SNDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRP   54 (180)
Q Consensus        11 ~~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~   54 (180)
                      +.|+|||.  .++|..++.|+|+.++ |.|. |++||.|++..|.+
T Consensus         2 ~~DiDEC~~~~~~C~~~a~C~Nt~Gs-y~C~-C~~Gy~GnG~~C~d   45 (285)
T 1gl4_A            2 PLAQQTCANNRHQCSVHAECRDYATG-FCCR-CVANYTGNGRQCVA   45 (285)
T ss_dssp             -----CHHHHGGGSCTTEEEEECSSC-EEEE-ECTTEEECSSSEEE
T ss_pred             CccchhccCCCCCCCCCCEeEcCCCC-eEEE-cCCCCCCCCCcCCC
Confidence            46899998  6899999999999999 9999 99999999887754

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.78  E-value=3.9e-06  Score=65.72  Aligned_cols=38  Identities=29%  Similarity=0.741  Sum_probs=32.6

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeeecCCCCccCCcCCCc
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCR  158 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~  158 (180)
                      +|||.  .++|+.++.|+|+.|+|.|.|++||.|++. .|.
T Consensus         5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~-~C~   44 (285)
T 1gl4_A            5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR-QCV   44 (285)
T ss_dssp             --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS-SEE
T ss_pred             chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC-cCC
Confidence            49995  578999999999999999999999999998 574

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.78  E-value=6.8e-06  Score=46.76  Aligned_cols=33  Identities=15%  Similarity=0.350  Sum_probs=27.9

Q ss_pred             CCCCCCC---CCCCCCCeeeecC--CCeeecCCCCCCCcCC
Q psy13147         13 DSLACKP---NPCDPYSSCSVYS--EHVAMCDPCSGPQAPW   48 (180)
Q Consensus        13 d~~~C~~---~~C~~~~~C~~~~--~~~~~C~~C~~G~~g~   48 (180)
                      ++++|.+   +||.+ ++|+...  ++ |.|. |++||+|.
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~-~~C~-C~~GytG~   39 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQ-NYCR-CEVGYTGV   39 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTE-EEEE-ECTTCSST
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCC-EEEE-CCCCCccC
Confidence            6788987   99987 8999765  35 9999 99999985

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.73  E-value=2.5e-05  Score=51.36  Aligned_cols=64  Identities=23%  Similarity=0.542  Sum_probs=52.0

Q ss_pred             CCCCCCeEee-cCCCceeeCCCCCccCCCCCccCCCCCCCCC-CCCCC--CCCCCCCeeeecC-----CceeeecCCCCc
Q psy13147         80 TCGVNALCTV-VHHTPACYCPQGTIGNPYEHCATPLAPVPPP-NPCDH--VYCGSNAVCKHTN-----GIVTCECLPTYY  150 (180)
Q Consensus        80 ~C~~~~~C~~-~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~-d~C~~--~~C~~~~~C~~~~-----g~~~C~C~~G~~  150 (180)
                      .|..+|.|.+ ..+.+.|+|.+||.+++. .|..      +. +.|..  .-|+.+|.|+...     +..+|.|.+||.
T Consensus        11 ~C~~NA~C~r~~~g~e~C~C~~gy~gdg~-~Cv~------~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           11 QCPQNSGCFRHLDEREECKCLLNYKQEGD-KCVE------NPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCTTEEEECCTTSCCEEEECTTEEEETT-EEEE------CSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CCCCCCCeEEcCCCCEEEEecCCeecCCC-eEee------CCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            5778999977 458999999999999876 7876      32 46853  5599999999774     689999999975

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.69  E-value=1.1e-05  Score=49.01  Aligned_cols=43  Identities=19%  Similarity=0.403  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCCeeee-----cCCceeeecCCCCccCCcCCCccCCcC
Q psy13147        121 NPCDHVYCGSNAVCKH-----TNGIVTCECLPTYYGNGALGCRPECVL  163 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~g~~~~~C~deC~~  163 (180)
                      ++|.++||.++++|++     ..++|+|.|++||.|.....-++++..
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~   54 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ   54 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence            6676789999999996     678999999999998743212455544

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.69  E-value=7.6e-05  Score=49.37  Aligned_cols=63  Identities=22%  Similarity=0.378  Sum_probs=53.1

Q ss_pred             CCCCCCeEee-cCCCceeeCCCCCccCCCCCccCCCCCCCCCCC-CCC--CCCCCCCeeeecC-CceeeecCCCCc
Q psy13147         80 TCGVNALCTV-VHHTPACYCPQGTIGNPYEHCATPLAPVPPPNP-CDH--VYCGSNAVCKHTN-GIVTCECLPTYY  150 (180)
Q Consensus        80 ~C~~~~~C~~-~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~-C~~--~~C~~~~~C~~~~-g~~~C~C~~G~~  150 (180)
                      .|..++.|.. .+|...|+|..||.+++. .|..      + ++ |..  .-|+.+|.|+.+. ....|.|..+|.
T Consensus        17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~-~Cv~------~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           17 NVPENAACYRYLDGTEEWRCLLGFKEVGG-KCVP------A-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEECSS-SEEE------C-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             CCCCCCCeEECCCCCEeEEEECCeeccCC-EEEE------C-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            5778999988 668899999999999877 8987      5 77 643  4599999999884 889999999974

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.65  E-value=2.8e-05  Score=51.11  Aligned_cols=68  Identities=24%  Similarity=0.464  Sum_probs=50.5

Q ss_pred             CCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCC----CCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecC-
Q psy13147         17 CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRP----ECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVH-   91 (180)
Q Consensus        17 C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~----~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~-   91 (180)
                      |....|..++.|.....+...|. |.+||.+++..|+.    .|+.+                  .+.|.++|.|+... 
T Consensus         7 C~~~~C~~NA~C~r~~~g~e~C~-C~~gy~gdg~~Cv~~~~~sC~~n------------------NGGCd~nA~C~~~~~   67 (99)
T 1ob1_C            7 CVKKQCPQNSGCFRHLDEREECK-CLLNYKQEGDKCVENPNPTCNEN------------------NGGCDADAKCTEEDS   67 (99)
T ss_dssp             CCSCCCCTTEEEECCTTSCCEEE-ECTTEEEETTEEEECSCCCSTTG------------------GGGCCTTEEEECCSC
T ss_pred             eccCCCCCCCCeEEcCCCCEEEE-ecCCeecCCCeEeeCCCCChhhc------------------CCCcCCCceeEecCC
Confidence            44457888999988544338999 99999999876641    23211                  14699999999875 


Q ss_pred             ----CCceeeCCCCCc
Q psy13147         92 ----HTPACYCPQGTI  103 (180)
Q Consensus        92 ----g~~~C~C~~g~~  103 (180)
                          +...|.|.+||.
T Consensus        68 ~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           68 GSNGKKITCECTKPDS   83 (99)
T ss_dssp             SSSSCCCEEEECSTTC
T ss_pred             cccCCceEeEeCCCCc
Confidence                578999999974

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.59  E-value=1.1e-05  Score=67.80  Aligned_cols=58  Identities=31%  Similarity=0.781  Sum_probs=24.0

Q ss_pred             CCccCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCCCCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147         76 PCQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus        76 ~C~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      +|..+|.+ +.|+..   +.|.|.+||+|.   .|+.        ++|.+ +|.++++|++.   ++|.|++||.|.
T Consensus       394 ~C~~~C~n-G~C~~~---~~C~C~~G~~G~---~C~~--------~~C~~-~C~~~g~C~~~---~~C~C~~G~~G~  451 (463)
T 2wg3_C          394 ECSRLCRN-GYCTPT---GKCCCSPGWEGD---FCRT--------AKCEP-ACRHGGVCVRP---NKCLCKKGYLGP  451 (463)
T ss_dssp             HHHHHCCS-EEECTT---SCEEECTTEEST---TSCE--------ECC-----------------------------
T ss_pred             cccCCCCC-CccCCC---CeECCCCCcCCC---cCCc--------CcCCC-CCCCCCEECCC---CEEECCCCcccC
Confidence            34345764 788753   489999999998   8953        77876 89989999875   699999999986

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.57  E-value=3e-05  Score=47.02  Aligned_cols=35  Identities=20%  Similarity=0.428  Sum_probs=28.6

Q ss_pred             CCC-ccCCCCCCeEee-----cCCCceeeCCCCCccCCCCCccC
Q psy13147         75 DPC-QGTCGVNALCTV-----VHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        75 ~~C-~~~C~~~~~C~~-----~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      ++| ..+|.++++|++     ..++|+|.|++||+|.   .|+.
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~---~Ce~   47 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA---RCTE   47 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST---TSCE
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCC---ccCc
Confidence            344 357988999997     5689999999999998   8974

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.55  E-value=0.00013  Score=48.27  Aligned_cols=72  Identities=21%  Similarity=0.388  Sum_probs=52.5

Q ss_pred             CCCCCCCCCCCCeeeec-CCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecC-C
Q psy13147         15 LACKPNPCDPYSSCSVY-SEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVH-H   92 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~-~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~-g   92 (180)
                      .-|....|..++.|... ++. ..|. |..||.+++..|+..   +..|...            .+.|.++|+|+.+. .
T Consensus        11 h~C~~t~Cp~NA~C~r~~~G~-e~Cr-Cl~gY~~dg~~Cv~~---Np~C~~n------------NGGCd~nAeC~~~~~~   73 (105)
T 1n1i_A           11 HKCIDTNVPENAACYRYLDGT-EEWR-CLLGFKEVGGKCVPA---SITCEEN------------NGGCAPEAECTMDDKK   73 (105)
T ss_dssp             TSCCSSCCCTTEEEEECTTSC-EEEE-ECTTEEECSSSEEEC---CCCTTSG------------GGGSCTTSEEEECTTS
T ss_pred             cEecCCCCCCCCCeEECCCCC-EeEE-EECCeeccCCEEEEC---Ccchhhc------------CCCcCCCcEeEECCCC
Confidence            34555578899999984 555 8999 999999998777521   1111100            24799999999986 7


Q ss_pred             CceeeCCCCCc
Q psy13147         93 TPACYCPQGTI  103 (180)
Q Consensus        93 ~~~C~C~~g~~  103 (180)
                      .-.|.|..+|.
T Consensus        74 ki~C~C~~~~~   84 (105)
T 1n1i_A           74 EVECKCTKEGS   84 (105)
T ss_dssp             CEEEECCSTTC
T ss_pred             EEEeECCCCCC
Confidence            88999999973

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.51  E-value=5e-05  Score=43.09  Aligned_cols=32  Identities=25%  Similarity=0.492  Sum_probs=27.0

Q ss_pred             CCCCC---CCCCCCCeeeecC--CceeeecCCCCccCC
Q psy13147        121 NPCDH---VYCGSNAVCKHTN--GIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~---~~C~~~~~C~~~~--g~~~C~C~~G~~g~~  153 (180)
                      ++|.+   +||.+ ++|++..  ++|.|.|++||+|..
T Consensus         4 ~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~   40 (46)
T 1k36_A            4 TKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVR   40 (46)
T ss_dssp             ECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTT
T ss_pred             ccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCC
Confidence            78866   89987 8999754  789999999999863

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.38  E-value=0.00011  Score=43.24  Aligned_cols=40  Identities=23%  Similarity=0.521  Sum_probs=29.2

Q ss_pred             CCCCC--CCCCCCCeeeecCCceeeecCCCCccC--CcCCC--ccCCcC
Q psy13147        121 NPCDH--VYCGSNAVCKHTNGIVTCECLPTYYGN--GALGC--RPECVL  163 (180)
Q Consensus       121 d~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~g~--~~~~C--~deC~~  163 (180)
                      |||..  ..|.  ..|+|++|+|+|.|++||...  +. .|  +|||..
T Consensus         2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~-~C~didec~c   47 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGK-ACIPTGPYPC   47 (55)
T ss_dssp             CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSS-CEEESSSSCT
T ss_pred             ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCC-eeccCccccC
Confidence            67753  4574  499999999999999999853  33 45  456654

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.37  E-value=2.8e-05  Score=45.34  Aligned_cols=30  Identities=30%  Similarity=0.629  Sum_probs=24.3

Q ss_pred             CCCCCCeEeec----CCCceeeCCCCCccCCCCCccC
Q psy13147         80 TCGVNALCTVV----HHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        80 ~C~~~~~C~~~----~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      +|.++++|++.    .++|+|.|++||+|.   .|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~---~Ce~   48 (52)
T 3ca7_A           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCEY   48 (52)
T ss_dssp             TSCTTCEEEEEEETTEEEEEEECCTTEEST---TSCE
T ss_pred             cCCCCCEEecCccCCCCCEEEECCCCCcCC---CCcc
Confidence            56778899863    468999999999998   7863

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=96.97  E-value=0.00039  Score=40.82  Aligned_cols=35  Identities=20%  Similarity=0.461  Sum_probs=27.0

Q ss_pred             CCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCC--CCCCC
Q psy13147         15 LACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW--LPHCR   53 (180)
Q Consensus        15 ~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~--~~~C~   53 (180)
                      |||.  ..+|.  ..|+|++++ |+|. |++||++.  +..|+
T Consensus         2 dEC~~~~~~C~--~~C~nt~Gs-y~C~-C~~Gy~L~~d~~~C~   40 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHEEQNS-VVCS-CARGYTLADNGKACI   40 (55)
T ss_dssp             CCTTTGGGGCS--SEEEEETTE-EEEE-CCTTEEECTTSSCEE
T ss_pred             ccccCCCCCcC--cEeEcCCCC-eEEe-CCCCCEECCCCCeec
Confidence            6786  34674  599999998 9999 99999853  45564

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.94  E-value=0.00029  Score=59.85  Aligned_cols=59  Identities=22%  Similarity=0.501  Sum_probs=13.0

Q ss_pred             CCceeeCCCCCccCCCCCccC---CCCC-CCCCCCCCCCCCCCCCeeeec--CCceeeecCCCCccCC
Q psy13147         92 HTPACYCPQGTIGNPYEHCAT---PLAP-VPPPNPCDHVYCGSNAVCKHT--NGIVTCECLPTYYGNG  153 (180)
Q Consensus        92 g~~~C~C~~g~~g~~~~~C~~---~~~~-~~~~d~C~~~~C~~~~~C~~~--~g~~~C~C~~G~~g~~  153 (180)
                      ..+.|.|++||.|.   .|+.   .... ...++.|.+.+|..++.+...  ...+.|.|++||.|..
T Consensus       458 ~tg~C~C~~g~~G~---~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~  522 (525)
T 4aqs_A          458 ETGYCYCKRLVTGQ---RCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQ  522 (525)
T ss_dssp             TTCCBCBCTTCCST---TTCC-----------------------------------------------
T ss_pred             CCCEEECCCCCcCC---CcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCC
Confidence            34579999999987   5531   0000 001366776677776666543  3345799999999863

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.87  E-value=0.00041  Score=40.48  Aligned_cols=29  Identities=28%  Similarity=0.689  Sum_probs=25.4

Q ss_pred             CCCCCCCCeee--ecCCceeeecCCCCccCC
Q psy13147        125 HVYCGSNAVCK--HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       125 ~~~C~~~~~C~--~~~g~~~C~C~~G~~g~~  153 (180)
                      .+||.++++|+  +..++|+|.|++||+|..
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~   41 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGER   41 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTT
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCC
Confidence            47898899998  678899999999999973

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.85  E-value=0.00048  Score=40.18  Aligned_cols=31  Identities=32%  Similarity=0.708  Sum_probs=26.2

Q ss_pred             cCCCCCCeEe--ecCCCceeeCCCCCccCCCCCccC
Q psy13147         79 GTCGVNALCT--VVHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        79 ~~C~~~~~C~--~~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      ++|.++++|+  +..++|.|.|++||+|.   .|+.
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~---~Ce~   44 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYIGE---RCQY   44 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEEST---TSCE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCcCC---CCCc
Confidence            4788889998  55678999999999998   8864

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=96.82  E-value=0.00047  Score=42.48  Aligned_cols=38  Identities=24%  Similarity=0.478  Sum_probs=29.5

Q ss_pred             CCCCCCCC--CCCCCCCeeeecCC-CeeecCCCCCCCcCC--CCCCC
Q psy13147         12 NDSLACKP--NPCDPYSSCSVYSE-HVAMCDPCSGPQAPW--LPHCR   53 (180)
Q Consensus        12 ~d~~~C~~--~~C~~~~~C~~~~~-~~~~C~~C~~G~~g~--~~~C~   53 (180)
                      +|+++|..  ..|  ...|+++.+ + |.|+ |++||...  +.+|.
T Consensus         3 ~d~~eC~~~nggC--~h~C~n~~g~s-~~C~-C~~Gy~L~~D~~tC~   45 (69)
T 1kli_L            3 DDQLICVNENGGC--EQYCSDHTGTK-RSCR-CHEGYSLLADGVSCT   45 (69)
T ss_dssp             SCCCCTTSGGGGC--SSEEEEETTTE-EEEE-CCTTEEECTTSSCEE
T ss_pred             cccccccCCCCCc--CCEeEcCCCCC-EEEe-CCCCCeECCCCCccc
Confidence            58999973  356  468999998 6 9999 99999854  45564

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.77  E-value=0.00052  Score=48.91  Aligned_cols=32  Identities=34%  Similarity=0.905  Sum_probs=29.2

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ++|.+.+|..++.|++..++|.|.|++||.|.
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~  151 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGP  151 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEEST
T ss_pred             CCCcCCCCCCCCEEecCCCCceEeCCCCCcCc
Confidence            67777889888999999999999999999986

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.66  E-value=0.00012  Score=61.33  Aligned_cols=63  Identities=25%  Similarity=0.694  Sum_probs=21.2

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecCCCc
Q psy13147         15 LACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVHHTP   94 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~   94 (180)
                      ++|.. +|.+ ++|++   . +.|. |++||+|..  |.                    +++|..+|.++++|+..   +
T Consensus       393 ~~C~~-~C~n-G~C~~---~-~~C~-C~~G~~G~~--C~--------------------~~~C~~~C~~~g~C~~~---~  440 (463)
T 2wg3_C          393 SECSR-LCRN-GYCTP---T-GKCC-CSPGWEGDF--CR--------------------TAKCEPACRHGGVCVRP---N  440 (463)
T ss_dssp             CHHHH-HCCS-EEECT---T-SCEE-ECTTEESTT--SC--------------------EECC-----------------
T ss_pred             ccccC-CCCC-CccCC---C-CeEC-CCCCcCCCc--CC--------------------cCcCCCCCCCCCEECCC---C
Confidence            44543 5874 78974   2 5899 999999852  31                    12333367777888764   6


Q ss_pred             eeeCCCCCccCCCCCccC
Q psy13147         95 ACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        95 ~C~C~~g~~g~~~~~C~~  112 (180)
                      .|.|++||+|.   .|+.
T Consensus       441 ~C~C~~G~~G~---~C~~  455 (463)
T 2wg3_C          441 KCLCKKGYLGP---QCEQ  455 (463)
T ss_dssp             ------------------
T ss_pred             EEECCCCcccC---CCCC
Confidence            99999999998   8874

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=96.57  E-value=0.0017  Score=39.95  Aligned_cols=41  Identities=24%  Similarity=0.465  Sum_probs=29.5

Q ss_pred             CCCCCC--CCCCCCCeeeecCC-ceeeecCCCCccC--CcCCC--ccCCcC
Q psy13147        120 PNPCDH--VYCGSNAVCKHTNG-IVTCECLPTYYGN--GALGC--RPECVL  163 (180)
Q Consensus       120 ~d~C~~--~~C~~~~~C~~~~g-~~~C~C~~G~~g~--~~~~C--~deC~~  163 (180)
                      +|+|..  ..|.  ..|++++| +|.|.|++||...  +. .|  ++||.-
T Consensus         5 ~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~-tC~d~dec~C   52 (69)
T 1kli_L            5 QLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVEYPC   52 (69)
T ss_dssp             CCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSS-CEEECSSSCT
T ss_pred             cccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCC-cccCcccccC
Confidence            488953  4574  48999999 8999999999853  33 46  346543

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.54  E-value=0.00081  Score=47.90  Aligned_cols=40  Identities=23%  Similarity=0.487  Sum_probs=32.0

Q ss_pred             CCC-ccCCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCCCCCCCC
Q psy13147         75 DPC-QGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVPPPNPCD  124 (180)
Q Consensus        75 ~~C-~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~~~d~C~  124 (180)
                      ++| ..+|..+++|++..++|.|.|++||.|.   .|+.      + ++|.
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~---~Ce~------~-~~c~  160 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGP---ECEY------V-RDDD  160 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEEST---TSCE------E-CC--
T ss_pred             CCCcCCCCCCCCEEecCCCCceEeCCCCCcCc---cccc------C-cccC
Confidence            445 3468888999999999999999999998   8987      4 7775

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=96.52  E-value=0.00063  Score=51.35  Aligned_cols=88  Identities=19%  Similarity=0.442  Sum_probs=55.3

Q ss_pred             CCCCCCeEeecCCCceeeCCCCCccCCCCCccCCCCCCC---CCCCCC----CCCCCCCCeeeecCCceeeecCCC----
Q psy13147         80 TCGVNALCTVVHHTPACYCPQGTIGNPYEHCATPLAPVP---PPNPCD----HVYCGSNAVCKHTNGIVTCECLPT----  148 (180)
Q Consensus        80 ~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~~~---~~d~C~----~~~C~~~~~C~~~~g~~~C~C~~G----  148 (180)
                      .|..++.|+.    ..|.|.+||.|.   .|+-......   ....|.    ..+|..+++|+.    ..|.|.+|    
T Consensus        97 ~Csg~G~C~~----g~C~C~~G~~G~---~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~  165 (217)
T 2p28_B           97 LCHGKGFLEC----GICRCDTGYIGK---NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPG  165 (217)
T ss_dssp             TTTTSEEEET----TEEEECTTEEST---TSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTT
T ss_pred             ccCCCceEEC----CEEECCCCccCC---cccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCc
Confidence            5777888874    589999999998   6652000000   001353    357888899984    37999999    


Q ss_pred             --CccCCcCCCccCCcCC--CCCCCC--CcccCCcc
Q psy13147        149 --YYGNGALGCRPECVLN--TDCPNS--AACINNSI  178 (180)
Q Consensus       149 --~~g~~~~~C~deC~~~--~~C~~~--~~C~n~~~  178 (180)
                        |.|.....-+++|...  .+|..+  ++|.+..|
T Consensus       166 ~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~g~C  201 (217)
T 2p28_B          166 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKC  201 (217)
T ss_dssp             CCEESTTSCEESSCSCEETTEETTCTTTEEEETTEE
T ss_pred             ccEECCCcccCCccCCCCCCCCCCCCCCcEEeCCee
Confidence              4665331003467652  368776  78877655

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.33  E-value=0.0016  Score=37.60  Aligned_cols=28  Identities=29%  Similarity=0.655  Sum_probs=23.0

Q ss_pred             CCCCCCCeeee----cCCceeeecCCCCccCC
Q psy13147        126 VYCGSNAVCKH----TNGIVTCECLPTYYGNG  153 (180)
Q Consensus       126 ~~C~~~~~C~~----~~g~~~C~C~~G~~g~~  153 (180)
                      +||.++++|++    ..++|+|.|++||.|..
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~   45 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQR   45 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTEESTT
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCCcCCC
Confidence            36778899996    35689999999999863

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.32  E-value=0.0021  Score=36.98  Aligned_cols=24  Identities=25%  Similarity=0.584  Sum_probs=20.1

Q ss_pred             CCCCCCCeeeecCCceeeecCCCCcc
Q psy13147        126 VYCGSNAVCKHTNGIVTCECLPTYYG  151 (180)
Q Consensus       126 ~~C~~~~~C~~~~g~~~C~C~~G~~g  151 (180)
                      ..|.  ..|+|++|+|+|.|++||..
T Consensus         6 g~C~--~~C~n~~gs~~C~C~~Gy~L   29 (51)
T 1kig_L            6 GGCD--QFCREERSEVRCSCAHGYVL   29 (51)
T ss_dssp             TSSS--SCCCEETTEECCCCCTTEEE
T ss_pred             CCcC--CEeEcCCCCeEEeCCCCcEE
Confidence            3463  37999999999999999984

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.30  E-value=0.0014  Score=56.16  Aligned_cols=35  Identities=20%  Similarity=0.329  Sum_probs=30.9

Q ss_pred             CCCCCCCCCCCCCCeeee-cCCCeeecCCCC-CCCcCCC
Q psy13147         13 DSLACKPNPCDPYSSCSV-YSEHVAMCDPCS-GPQAPWL   49 (180)
Q Consensus        13 d~~~C~~~~C~~~~~C~~-~~~~~~~C~~C~-~G~~g~~   49 (180)
                      ++|+|.++||.++|+|++ ..++ |.|. |+ +||+|..
T Consensus         1 ~~d~C~~~PC~ngG~C~~~~~~~-y~C~-C~~~G~~G~~   37 (553)
T 1q4g_A            1 PVNPCCYYPCQHQGICVRFGLDR-YQCD-CTRTGYSGPN   37 (553)
T ss_dssp             CCCGGGGCCCCTTCEEEEETTTE-EEEE-CTTSSEETTT
T ss_pred             CCCcCCCCCCCCCCCcCCCCCCc-eEee-CCCCCcCCCC
Confidence            368999999999999999 6667 9999 99 9999853

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.17  E-value=0.0066  Score=51.44  Aligned_cols=35  Identities=14%  Similarity=0.214  Sum_probs=22.4

Q ss_pred             CCCCCCCCCCCCeeeec----CCceeeecCCCCccCCcC
Q psy13147        121 NPCDHVYCGSNAVCKHT----NGIVTCECLPTYYGNGAL  155 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~----~g~~~C~C~~G~~g~~~~  155 (180)
                      +.|.+-+|..++.|.+.    ...+.|.|++||.|....
T Consensus       436 ~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce  474 (525)
T 4aqs_A          436 YGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD  474 (525)
T ss_dssp             TSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC
T ss_pred             CCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc
Confidence            45655556555555432    345679999999987543

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.14  E-value=0.0053  Score=44.01  Aligned_cols=27  Identities=30%  Similarity=0.639  Sum_probs=22.2

Q ss_pred             CCCCCCeeeecC--CCeeec-CCCCCCCcCCC
Q psy13147         21 PCDPYSSCSVYS--EHVAMC-DPCSGPQAPWL   49 (180)
Q Consensus        21 ~C~~~~~C~~~~--~~~~~C-~~C~~G~~g~~   49 (180)
                      ||.++++|....  +. ++| . |++||+|..
T Consensus         2 ~C~~~g~C~~~~~~g~-~~C~~-C~~g~~G~~   31 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKE-VVCTH-CPTGTAGKR   31 (162)
T ss_dssp             CSCTTCCEEECSSSCC-EEECS-CCTTEESTT
T ss_pred             cCcCcCcccccCCCCC-EEeCC-CCCCCcCCC
Confidence            688899998765  34 899 8 999999864

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.97  E-value=0.0024  Score=45.97  Aligned_cols=31  Identities=23%  Similarity=0.537  Sum_probs=24.9

Q ss_pred             CCCCCCCC-----CCCCCeeeecCCceeeecCCCCccC
Q psy13147        120 PNPCDHVY-----CGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       120 ~d~C~~~~-----C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      +++|...+     |..  .|+++.|+|.|.|++||.+.
T Consensus       124 i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~  159 (170)
T 1szb_A          124 IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH  159 (170)
T ss_dssp             CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred             cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence            48896432     754  89999999999999999854

>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1

Probab=95.95  E-value=0.0046  Score=30.23  Aligned_cols=22  Identities=55%  Similarity=1.235  Sum_probs=20.2

Q ss_pred             cCCcCCCCCCCCCcccCCcccC
Q psy13147        159 PECVLNTDCPNSAACINNSIIE  180 (180)
Q Consensus       159 deC~~~~~C~~~~~C~n~~~~~  180 (180)
                      .||..+.+|+.+..|+|.+|+|
T Consensus         2 pEC~~~sdCp~~~aC~n~kC~d   23 (26)
T 1oig_A            2 PECVLNSDCPSNQACVNQKCRD   23 (26)
T ss_dssp             CSCCSSTTSSTTCEECSSSEEC
T ss_pred             CcccccCcCCcCHhhhcCcccC
Confidence            5899989999999999999986

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.93  E-value=0.003  Score=54.28  Aligned_cols=34  Identities=24%  Similarity=0.459  Sum_probs=29.1

Q ss_pred             CCCCCCCCCCCCCeeeec-CCCeeecCCCC-CCCcCCC
Q psy13147         14 SLACKPNPCDPYSSCSVY-SEHVAMCDPCS-GPQAPWL   49 (180)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~-~~~~~~C~~C~-~G~~g~~   49 (180)
                      +|+|.++||.++|+|++. .++ |.|. |+ +||+|..
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~-y~C~-C~~~G~~G~~   36 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQ-YKCD-CTRTGFYGEN   36 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTE-EEEE-CTTSSEETTT
T ss_pred             CCCCCCCCCCCCCEeeCCCCCC-eEEe-cCCCCccCCC
Confidence            579999999999999964 356 9999 99 9999853

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=95.83  E-value=0.005  Score=35.37  Aligned_cols=30  Identities=20%  Similarity=0.412  Sum_probs=23.0

Q ss_pred             CCCCCCCeeeecCCCeeecCCCCCCCcC--CCCCCC
Q psy13147         20 NPCDPYSSCSVYSEHVAMCDPCSGPQAP--WLPHCR   53 (180)
Q Consensus        20 ~~C~~~~~C~~~~~~~~~C~~C~~G~~g--~~~~C~   53 (180)
                      ..|.  ..|+|++++ |+|. |++||+.  ++..|.
T Consensus         6 g~C~--~~C~n~~gs-~~C~-C~~Gy~L~~d~~tC~   37 (51)
T 1kig_L            6 GGCD--QFCREERSE-VRCS-CAHGYVLGDDSKSCV   37 (51)
T ss_dssp             TSSS--SCCCEETTE-ECCC-CCTTEEECTTSSCEE
T ss_pred             CCcC--CEeEcCCCC-eEEe-CCCCcEECCCCCccc
Confidence            3563  579999998 9999 9999985  445564

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=95.81  E-value=0.0061  Score=35.31  Aligned_cols=30  Identities=27%  Similarity=0.569  Sum_probs=22.7

Q ss_pred             CeeeecCC-ceeeecCCCCccC--CcCCC--ccCCc
Q psy13147        132 AVCKHTNG-IVTCECLPTYYGN--GALGC--RPECV  162 (180)
Q Consensus       132 ~~C~~~~g-~~~C~C~~G~~g~--~~~~C--~deC~  162 (180)
                      ..|+++++ +|+|.|++||...  +. .|  +|||.
T Consensus        11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~-tC~d~dec~   45 (53)
T 2bz6_L           11 QYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVEYP   45 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTSS-CEEECSSSC
T ss_pred             CEeEcCCCCCEEeeCCCCCEECCCCC-cccCCcccc
Confidence            47999999 7999999999853  33 45  35654

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.54  E-value=0.0049  Score=36.48  Aligned_cols=30  Identities=27%  Similarity=0.559  Sum_probs=24.8

Q ss_pred             CCCCCCeEee----cCCCceeeCCCCCccCCCCCccC
Q psy13147         80 TCGVNALCTV----VHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        80 ~C~~~~~C~~----~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      +|.++++|+.    ..+.|.|.|++||+|.   .|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~---~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESS---SSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccC---CCcc
Confidence            6888999984    3457899999999998   8864

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=95.53  E-value=0.0076  Score=34.89  Aligned_cols=32  Identities=16%  Similarity=0.284  Sum_probs=25.4

Q ss_pred             CeEeecCC-CceeeCCCCCccCC-CCCccCCCCCCCCCCCC
Q psy13147         85 ALCTVVHH-TPACYCPQGTIGNP-YEHCATPLAPVPPPNPC  123 (180)
Q Consensus        85 ~~C~~~~g-~~~C~C~~g~~g~~-~~~C~~~~~~~~~~d~C  123 (180)
                      ..|+++.+ +|+|.|++||.... ...|++      + |||
T Consensus        11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d------~-dec   44 (53)
T 2bz6_L           11 QYCSDHTGTKRSCRCHEGYSLLADGVSCTP------T-VEY   44 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTSSCEEE------C-SSS
T ss_pred             CEeEcCCCCCEEeeCCCCCEECCCCCcccC------C-ccc
Confidence            47999998 79999999998543 237987      4 887

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.48  E-value=0.0068  Score=51.82  Aligned_cols=34  Identities=26%  Similarity=0.654  Sum_probs=31.2

Q ss_pred             CCCCCCCCCCCCeeee-cCCceeeecC-CCCccCCc
Q psy13147        121 NPCDHVYCGSNAVCKH-TNGIVTCECL-PTYYGNGA  154 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~g~~~  154 (180)
                      |+|.++||.+++.|++ ..++|.|.|+ .||.|...
T Consensus         3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~C   38 (553)
T 1q4g_A            3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNC   38 (553)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTT
T ss_pred             CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCC
Confidence            8898899999999999 8999999999 99999743

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=95.45  E-value=0.017  Score=34.12  Aligned_cols=41  Identities=22%  Similarity=0.579  Sum_probs=27.4

Q ss_pred             CeeeecC-CceeeecCCCCccCCc-CCCccCCcCCCCCCCCCcccCC
Q psy13147        132 AVCKHTN-GIVTCECLPTYYGNGA-LGCRPECVLNTDCPNSAACINN  176 (180)
Q Consensus       132 ~~C~~~~-g~~~C~C~~G~~g~~~-~~C~deC~~~~~C~~~~~C~n~  176 (180)
                      ..|++++ |+|.|.|++||..... ..|+|.  ...+|  .+.|+|.
T Consensus        11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~--~~~pC--~~~c~n~   53 (59)
T 2wph_E           11 QFCKNSADNKVVCSCTEGYRLAENQKSCEPA--VPFPC--GRVSVSQ   53 (59)
T ss_dssp             SEEEECSTTCEEEECCTTEEECTTSSCEEES--SSSCT--TCCCSCC
T ss_pred             CEeEeCCCCCEEeeCCCCcEECCCCCcccCC--CCCCC--CCccccc
Confidence            4899999 6999999999985321 245442  12566  4567764

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.24  E-value=0.0074  Score=35.69  Aligned_cols=27  Identities=30%  Similarity=0.728  Sum_probs=22.9

Q ss_pred             CCCCCCeee--e--cCCceeeecCCCCccCC
Q psy13147        127 YCGSNAVCK--H--TNGIVTCECLPTYYGNG  153 (180)
Q Consensus       127 ~C~~~~~C~--~--~~g~~~C~C~~G~~g~~  153 (180)
                      +|.++++|+  .  ..+.|.|.|++||.|..
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~   45 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQR   45 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSS
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCC
Confidence            899999998  3  45689999999999863

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.24  E-value=0.012  Score=50.53  Aligned_cols=33  Identities=27%  Similarity=0.723  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCeeee-cCCceeeecC-CCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKH-TNGIVTCECL-PTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~g~~  153 (180)
                      |+|.++||.+++.|++ ..++|.|.|+ +||.|..
T Consensus         2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~   36 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGEN   36 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTT
T ss_pred             CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCC
Confidence            7898999999999996 5689999999 9999874

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.02  E-value=0.01  Score=42.56  Aligned_cols=42  Identities=17%  Similarity=0.310  Sum_probs=28.9

Q ss_pred             CCCCCCCCCCCCC---CCCeeeecCCCeeecCCCCCCCcCC--CCCCCC
Q psy13147         11 SNDSLACKPNPCD---PYSSCSVYSEHVAMCDPCSGPQAPW--LPHCRP   54 (180)
Q Consensus        11 ~~d~~~C~~~~C~---~~~~C~~~~~~~~~C~~C~~G~~g~--~~~C~~   54 (180)
                      ..|+++|...+-.   -...|+++.++ |.|. |++||++.  +..|++
T Consensus       121 ~~di~eC~~~~~~~~~C~~~C~n~~g~-~~C~-C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          121 AEDIDECQVAPGEAPTCDHHCHNHLGG-FYCS-CRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             EEECCTTCCCTTSCCSSSSEEEEETTE-EEEE-CCTTEEECTTSSCEEE
T ss_pred             ccccCcccCCCCCCCccCCccccCCCC-EEEe-CCCCcEECCCCCcccc
Confidence            3578999843300   02389999998 9999 99999854  344543

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.00  E-value=0.015  Score=48.09  Aligned_cols=83  Identities=20%  Similarity=0.441  Sum_probs=24.1

Q ss_pred             CCCC-CeeeecCCCeeecCCCCCCCcCCC-CCCCC-----CCCCCCCCC----CCCcccCCcc---cCCC---ccCCCCC
Q psy13147         22 CDPY-SSCSVYSEHVAMCDPCSGPQAPWL-PHCRP-----ECLCNSDCP----FNMACLGQKC---RDPC---QGTCGVN   84 (180)
Q Consensus        22 C~~~-~~C~~~~~~~~~C~~C~~G~~g~~-~~C~~-----~C~~~~~C~----~~~~C~~~~C---~~~C---~~~C~~~   84 (180)
                      |..+ +.|....+. +.|. |+.+++|.. ..|.+     .++.+..+.    ....|.--.|   -+.|   ..+|.++
T Consensus       299 CnGHas~C~~~~g~-~~C~-C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ng  376 (426)
T 3zyj_B          299 CNLHATVCVYDNSK-LTCE-CEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNG  376 (426)
T ss_dssp             CSSSCSCEEEETTE-EEEC-CCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-----------------
T ss_pred             CCCchhhcCCCCCC-ceee-CCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCC
Confidence            5444 478877766 8999 999999875 23432     121111000    0001110001   0223   2368888


Q ss_pred             CeEeecCCCceeeCCCCCccCCCCCccC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      ++|.+..   +|.|++||.|.   .|+.
T Consensus       377 g~C~~~~---~C~C~~G~~G~---~Ce~  398 (426)
T 3zyj_B          377 GTCHNNV---RCLCPAAYTGI---LCEK  398 (426)
T ss_dssp             ----------------------------
T ss_pred             CCcCCCC---CCcCCCCCcCC---CCcC
Confidence            8897654   89999999998   6753

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.88  E-value=0.026  Score=38.47  Aligned_cols=30  Identities=27%  Similarity=0.607  Sum_probs=24.6

Q ss_pred             CCCCCCeEeecC--CCc-eeeCCCCCccCCCCCccC
Q psy13147         80 TCGVNALCTVVH--HTP-ACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        80 ~C~~~~~C~~~~--g~~-~C~C~~g~~g~~~~~C~~  112 (180)
                      +|.++++|++..  ..+ +|.|++||+|.   .|+.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~---~Ce~   34 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ---HCEI   34 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEEST---TSCE
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCc---cccc
Confidence            577889998874  555 99999999998   8874

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=94.42  E-value=0.048  Score=32.16  Aligned_cols=28  Identities=18%  Similarity=0.476  Sum_probs=22.2

Q ss_pred             CeEeecC-CCceeeCCCCCccCC-CCCccC
Q psy13147         85 ALCTVVH-HTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        85 ~~C~~~~-g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      ..|+++. ++|+|.|++||.... ...|++
T Consensus        11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d   40 (59)
T 2wph_E           11 QFCKNSADNKVVCSCTEGYRLAENQKSCEP   40 (59)
T ss_dssp             SEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred             CEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence            4799998 699999999997643 237876

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=94.29  E-value=0.029  Score=39.67  Aligned_cols=32  Identities=28%  Similarity=0.658  Sum_probs=28.4

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ..|.+.+|..++.|++..++|.|.|.+||.|+
T Consensus       120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~  151 (164)
T 3cfw_A          120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGP  151 (164)
T ss_dssp             CCCCTTSSCSSEEEEEETTEEEEEECTTCBSS
T ss_pred             CCCCCCcCCCCCeecccCCCceeeeCCCcccc
Confidence            45666789889999999999999999999987

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.20  E-value=0.03  Score=38.18  Aligned_cols=26  Identities=15%  Similarity=0.374  Sum_probs=22.0

Q ss_pred             CCCCCCeeeecC--CCee-ecCCCCCCCcCC
Q psy13147         21 PCDPYSSCSVYS--EHVA-MCDPCSGPQAPW   48 (180)
Q Consensus        21 ~C~~~~~C~~~~--~~~~-~C~~C~~G~~g~   48 (180)
                      ||.++++|++..  .+ | .|. |++||+|.
T Consensus         2 pC~nggtC~~~~~~~~-~~~C~-Cp~g~~G~   30 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSN-IHWCN-CPKKFGGQ   30 (122)
T ss_dssp             CCCSSCEEEECTTTTT-CEEEE-CCTTEEST
T ss_pred             CCCCcCCcCCCcccCC-CCCcc-CCCCCCCc
Confidence            799999999874  45 5 999 99999984

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=93.64  E-value=0.038  Score=39.10  Aligned_cols=31  Identities=23%  Similarity=0.582  Sum_probs=28.3

Q ss_pred             cCCCCCCeEeecCCCceeeCCCCCccCCCCCccC
Q psy13147         79 GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        79 ~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      ..|..+++|+...++|.|.|.+||.|.   .|+.
T Consensus       125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~---~C~~  155 (164)
T 3cfw_A          125 WSCSGHGECVEIINNYTCNCDVGYYGP---QCQF  155 (164)
T ss_dssp             TSSCSSEEEEEETTEEEEEECTTCBSS---SSCB
T ss_pred             CcCCCCCeecccCCCceeeeCCCcccc---cccc
Confidence            468889999999999999999999998   8987

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=93.63  E-value=0.038  Score=45.61  Aligned_cols=66  Identities=21%  Similarity=0.506  Sum_probs=20.1

Q ss_pred             CeEeecCCCceeeCCCCCccCCCCCccCCCCC------------CCCCCCCC--------------CCCCCCCCeeeecC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNPYEHCATPLAP------------VPPPNPCD--------------HVYCGSNAVCKHTN  138 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~~~~C~~~~~~------------~~~~d~C~--------------~~~C~~~~~C~~~~  138 (180)
                      ..|....+.+.|.|++++.|..-..|......            ....++|.              ..+|.+++.|++..
T Consensus       304 s~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~C~~~~  383 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNNV  383 (426)
T ss_dssp             SCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------------
T ss_pred             hhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCCcCCCC
Confidence            46877777788988888887631122221100            00012332              13566777787654


Q ss_pred             CceeeecCCCCccCC
Q psy13147        139 GIVTCECLPTYYGNG  153 (180)
Q Consensus       139 g~~~C~C~~G~~g~~  153 (180)
                         +|+|++||.|..
T Consensus       384 ---~C~C~~G~~G~~  395 (426)
T 3zyj_B          384 ---RCLCPAAYTGIL  395 (426)
T ss_dssp             ---------------
T ss_pred             ---CCcCCCCCcCCC
Confidence               899999999974

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=93.48  E-value=0.044  Score=38.59  Aligned_cols=33  Identities=21%  Similarity=0.517  Sum_probs=26.8

Q ss_pred             CCCCCCCC---CCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACKP---NPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~~---~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      .|+++|..   .+|.  ..|.+..++ |+|. |.+||++.
T Consensus       115 ~d~~eC~~~~~~~C~--~~C~n~~g~-~~C~-C~~Gy~l~  150 (159)
T 1nzi_A          115 TDINECTDFVDVPCS--HFCNNFIGG-YFCS-CPPEYFLH  150 (159)
T ss_dssp             EECCTTTC-CCCCSS--SEEEEETTE-EEEE-CCTTCEEC
T ss_pred             ccCcccCCCCCCCCC--CcccCcCCC-EEEe-cCCCcEEC
Confidence            57889973   3574  589999888 9999 99999864

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=93.41  E-value=0.12  Score=33.33  Aligned_cols=71  Identities=18%  Similarity=0.352  Sum_probs=50.2

Q ss_pred             CCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC-CCCCCCCCCCCCCcccCCcccCCCccCCCCCCeEeecC-CCc
Q psy13147         17 CKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR-PECLCNSDCPFNMACLGQKCRDPCQGTCGVNALCTVVH-HTP   94 (180)
Q Consensus        17 C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~-~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~-g~~   94 (180)
                      |....|..++.|.....+.-.|. |..+|.-++..|+ ++   ..+|...            .+.|.++|+|.... ..-
T Consensus         7 C~~tkcp~NA~Cyr~~dg~EecR-Cllnykk~~~kCV~~~---~~~C~~N------------NGGCd~nA~C~~~~~~kI   70 (95)
T 1b9w_A            7 CIDTNVPENAACYRYLDGTEEWR-CLLYFKEDAGKCVPAP---NMTCKDK------------NGGCAPEAECKMNDKNEI   70 (95)
T ss_dssp             CSSCCCCTTEEEEECTTSCEEEE-ECTTEEEETTEEEECT---TCCTTTG------------GGGSCTTSEEEECTTSCE
T ss_pred             cccCCCCCCcCeEEEcCCCEEEE-EECCeEecCCEEEcCC---CCCcccc------------CCCcCCCcceeecCCCcE
Confidence            44457888999998765437999 9999987766664 10   1112110            25799999999888 678


Q ss_pred             eeeCCCCCc
Q psy13147         95 ACYCPQGTI  103 (180)
Q Consensus        95 ~C~C~~g~~  103 (180)
                      .|.|...+.
T Consensus        71 vC~C~~~~~   79 (95)
T 1b9w_A           71 VCKCTKEGS   79 (95)
T ss_dssp             EEECCSTTE
T ss_pred             EEECCCCCC
Confidence            999998863

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=93.04  E-value=0.17  Score=32.50  Aligned_cols=64  Identities=20%  Similarity=0.330  Sum_probs=49.6

Q ss_pred             CCCCCCeEeecC-CCceeeCCCCCccCCCCCccCCCCCCCC-CCCCCC--CCCCCCCeeeecC-CceeeecCCCCc
Q psy13147         80 TCGVNALCTVVH-HTPACYCPQGTIGNPYEHCATPLAPVPP-PNPCDH--VYCGSNAVCKHTN-GIVTCECLPTYY  150 (180)
Q Consensus        80 ~C~~~~~C~~~~-g~~~C~C~~g~~g~~~~~C~~~~~~~~~-~d~C~~--~~C~~~~~C~~~~-g~~~C~C~~G~~  150 (180)
                      .|+.++.|.... +...|+|..+|.-+.. .|+.      . ...|..  .-|..+|.|.... ....|.|...+.
T Consensus        11 kcp~NA~Cyr~~dg~EecRCllnykk~~~-kCV~------~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A           11 NVPENAACYRYLDGTEEWRCLLYFKEDAG-KCVP------APNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEEETT-EEEE------CTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred             CCCCCcCeEEEcCCCEEEEEECCeEecCC-EEEc------CCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence            577899998865 7899999999987655 7864      2 125753  5689999999877 788999998764

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=92.18  E-value=0.12  Score=36.88  Aligned_cols=26  Identities=35%  Similarity=0.852  Sum_probs=20.0

Q ss_pred             CCCCCCeEeecC--CCcee-eCCCCCccC
Q psy13147         80 TCGVNALCTVVH--HTPAC-YCPQGTIGN  105 (180)
Q Consensus        80 ~C~~~~~C~~~~--g~~~C-~C~~g~~g~  105 (180)
                      +|..+++|....  +.++| .|+++|+|.
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~   30 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGK   30 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEEST
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCC
Confidence            356678887765  57899 699999887

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=91.55  E-value=0.17  Score=28.80  Aligned_cols=30  Identities=30%  Similarity=0.764  Sum_probs=23.1

Q ss_pred             cCCCCCCeEeecC--CCceeeCCCCCccCCCCCccC
Q psy13147         79 GTCGVNALCTVVH--HTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        79 ~~C~~~~~C~~~~--g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      +.|.++ +|....  +.+.|.|.+||+|.   .|+.
T Consensus        14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~---RCe~   45 (50)
T 3e50_C           14 QFCFHG-TCRFLVQEDKPACVCHSGYVGA---RCEH   45 (50)
T ss_pred             CcccCC-EEeeccCCCCeEEECCCCCccc---CCCc
Confidence            356654 887643  77999999999999   7864

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=91.34  E-value=0.071  Score=37.25  Aligned_cols=33  Identities=27%  Similarity=0.649  Sum_probs=29.1

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ++|.+.||..++.|.+..+.|.|.|.+||.|+.
T Consensus       120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~  152 (157)
T 1g1t_A          120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLK  152 (157)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTT
T ss_pred             CCCCCCCCCCCCEeecCCCCeeEECCCCccCcc
Confidence            567678898889999999999999999999874

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=91.24  E-value=0.096  Score=32.82  Aligned_cols=32  Identities=31%  Similarity=0.756  Sum_probs=23.3

Q ss_pred             CCCC---CCCCCCCCeee--ecCCceeeecCCCCccCC
Q psy13147        121 NPCD---HVYCGSNAVCK--HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~---~~~C~~~~~C~--~~~g~~~C~C~~G~~g~~  153 (180)
                      ++|.   .+.|.+ +.|+  ...+.+.|.|++||.|.-
T Consensus        38 ~pC~~~~~~yCln-G~C~~i~~~~~~~C~C~~GYtG~R   74 (79)
T 1xdt_R           38 DPCLRKYKDFCIH-GECKYVKELRAPSCICHPGYHGER   74 (79)
T ss_dssp             -CTTTTTTTCCSS-EEECCBGGGTBCCEEECTTEESTT
T ss_pred             CCCCccccCcCCC-CEeeeecCCCCeEEEcCCCccccc
Confidence            4554   478876 4895  445788999999999974

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=91.01  E-value=0.18  Score=41.09  Aligned_cols=34  Identities=24%  Similarity=0.431  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeeecCCCCC-CCcCC
Q psy13147         13 DSLACKPNPCDPYSSCSVYSEHVAMCDPCSG-PQAPW   48 (180)
Q Consensus        13 d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~-G~~g~   48 (180)
                      ..++|.++||.++++|....++ |.|. |+. ||.|.
T Consensus       184 ~~~~C~~~pC~n~g~C~~~~~~-~~C~-C~~~~~~G~  218 (410)
T 3asi_A          184 PSTTCQEDSCSNQGVCLQQWDG-FSCD-CSMTSFSGP  218 (410)
T ss_dssp             CSSCCCTTSSSTTCEEEECSSS-EEEE-CTTTSEEST
T ss_pred             CCCCcccccCCCCCEecCCCCC-ceEe-ccCCcccCC
Confidence            4578999999999999998877 9999 996 99874

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=90.97  E-value=0.22  Score=28.31  Aligned_cols=29  Identities=24%  Similarity=0.623  Sum_probs=22.3

Q ss_pred             cCCCCCCeEeec--CCCceeeCCCCCccCCCCCcc
Q psy13147         79 GTCGVNALCTVV--HHTPACYCPQGTIGNPYEHCA  111 (180)
Q Consensus        79 ~~C~~~~~C~~~--~g~~~C~C~~g~~g~~~~~C~  111 (180)
                      +.|.. ++|+..  .+.+.|.|+.||+|.   .|+
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~---RCe   48 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGE---RCG   48 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSS---SCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccc---ccc
Confidence            45764 699744  367899999999998   775

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=90.91  E-value=0.25  Score=34.58  Aligned_cols=31  Identities=32%  Similarity=0.747  Sum_probs=25.0

Q ss_pred             CCCCCC---CCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        120 PNPCDH---VYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       120 ~d~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      +++|..   .+|.  ..|.++.++|.|.|++||.+.
T Consensus       117 ~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~  150 (159)
T 1nzi_A          117 INECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH  150 (159)
T ss_dssp             CCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred             CcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence            488953   3574  489999999999999999853

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=90.41  E-value=0.13  Score=29.19  Aligned_cols=29  Identities=34%  Similarity=0.871  Sum_probs=22.3

Q ss_pred             CCCCCCeEee--cCCCceeeCCCCCccCCCCCccC
Q psy13147         80 TCGVNALCTV--VHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        80 ~C~~~~~C~~--~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      .|.+ ++|..  ..+.+.|.|++||+|.   .|+.
T Consensus        15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~---RCe~   45 (50)
T 1iox_A           15 YCIK-GRCRFVVAEQTPSCVCDEGYIGA---RCER   45 (50)
T ss_dssp             SCTT-CCEEEETTTTEEEECCCTTEETT---TTCE
T ss_pred             cccC-CEEEeEcCCCCeEEECCCCcccC---CCCe
Confidence            4665 68864  3467899999999999   7864

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=90.16  E-value=0.26  Score=40.03  Aligned_cols=33  Identities=21%  Similarity=0.629  Sum_probs=29.4

Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCC-CCccC
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLP-TYYGN  152 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~-G~~g~  152 (180)
                      .++|...||.++++|+...++|.|.|+. ||.|.
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~  218 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP  218 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSSEEEECTTTSEEST
T ss_pred             CCCcccccCCCCCEecCCCCCceEeccCCcccCC
Confidence            3788889999999999999999999996 99875

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=90.04  E-value=0.18  Score=28.62  Aligned_cols=28  Identities=25%  Similarity=0.616  Sum_probs=22.4

Q ss_pred             CCCCCCCCeee--ecCCceeeecCCCCccCC
Q psy13147        125 HVYCGSNAVCK--HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       125 ~~~C~~~~~C~--~~~g~~~C~C~~G~~g~~  153 (180)
                      .+.|.+ ++|.  ...+.+.|+|+.||.|.-
T Consensus        13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~R   42 (50)
T 1iox_A           13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGAR   42 (50)
T ss_dssp             TTSCTT-CCEEEETTTTEEEECCCTTEETTT
T ss_pred             cCcccC-CEEEeEcCCCCeEEECCCCcccCC
Confidence            367876 7896  557789999999999974

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=89.43  E-value=0.36  Score=27.40  Aligned_cols=27  Identities=33%  Similarity=0.816  Sum_probs=21.9

Q ss_pred             CCCCCCCeee--ecCCceeeecCCCCccCC
Q psy13147        126 VYCGSNAVCK--HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       126 ~~C~~~~~C~--~~~g~~~C~C~~G~~g~~  153 (180)
                      +.|.+ ++|.  ...+.+.|+|+.||.|+-
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~R   46 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGER   46 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSSS
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCccccc
Confidence            67864 6998  557789999999999973

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=89.28  E-value=0.15  Score=40.57  Aligned_cols=30  Identities=30%  Similarity=0.722  Sum_probs=17.7

Q ss_pred             CCCC-CCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      |||. ...|.  ..|++++|+|.|.|++||...
T Consensus         2 ~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~l~   32 (349)
T 3v64_C            2 NECAEEGYCS--QGCTNSEGAFQCWCEAGYELR   32 (349)
T ss_dssp             -------CCS--SEECCC---CCEECCTTEEEC
T ss_pred             cccCCCCCCc--CeeecCCCCeEEECCCCccCC
Confidence            6775 35675  389999999999999999853

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=89.14  E-value=0.14  Score=35.69  Aligned_cols=31  Identities=23%  Similarity=0.568  Sum_probs=27.4

Q ss_pred             cCCCCCCeEeecCCCceeeCCCCCccCCCCCccC
Q psy13147         79 GTCGVNALCTVVHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        79 ~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      .+|..++.|.+..+.|.|.|.+||.|+   .|+.
T Consensus       125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~---~Ce~  155 (157)
T 1g1t_A          125 TSCSGHGECVETINNYTCKCDPGFSGL---KCEQ  155 (157)
T ss_dssp             TGGGGSEEEEEETTEEEEEECTTEEST---TSCE
T ss_pred             CCCCCCCEeecCCCCeeEECCCCccCc---cccc
Confidence            467778999999999999999999998   8864

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=89.10  E-value=0.32  Score=27.64  Aligned_cols=28  Identities=21%  Similarity=0.622  Sum_probs=22.1

Q ss_pred             CCCCCCCCeeee--cCCceeeecCCCCccCC
Q psy13147        125 HVYCGSNAVCKH--TNGIVTCECLPTYYGNG  153 (180)
Q Consensus       125 ~~~C~~~~~C~~--~~g~~~C~C~~G~~g~~  153 (180)
                      .+.|.+ ++|..  ..+.+.|.|++||.|..
T Consensus        13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~R   42 (50)
T 3e50_C           13 TQFCFH-GTCRFLVQEDKPACVCHSGYVGAR   42 (50)
T ss_pred             cCcccC-CEEeeccCCCCeEEECCCCCcccC
Confidence            367875 49985  45789999999999974

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}

Probab=88.07  E-value=0.25  Score=41.91  Aligned_cols=39  Identities=21%  Similarity=0.396  Sum_probs=31.9

Q ss_pred             CCCCCC---CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCC
Q psy13147         13 DSLACK---PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHC   52 (180)
Q Consensus        13 d~~~C~---~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C   52 (180)
                      .++.|.   .++|+.++.|+......|.|. |+.||.|.+..|
T Consensus        17 ~~~~c~~~~~~~c~~~a~C~~~~~~~~~c~-C~~G~ag~G~~c   58 (551)
T 3fby_A           17 AQRFCPDGSPSECHEHADCVLERDGSRSCV-CAVGWAGNGILC   58 (551)
T ss_dssp             BCCBCTTSSBCCCCTTEEEEECTTSCEEEE-ECTTEESSSSSC
T ss_pred             ccccCCCCCCCCCCCCCeeEeCCCCCEecC-CCCCCCCCCccc
Confidence            456675   479999999998865548999 999999987666

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=87.99  E-value=0.13  Score=32.16  Aligned_cols=33  Identities=15%  Similarity=0.268  Sum_probs=22.9

Q ss_pred             CCCCCC---CCCCCCCCeeeecC--CCeeecCCCCCCCcCC
Q psy13147         13 DSLACK---PNPCDPYSSCSVYS--EHVAMCDPCSGPQAPW   48 (180)
Q Consensus        13 d~~~C~---~~~C~~~~~C~~~~--~~~~~C~~C~~G~~g~   48 (180)
                      ..++|.   .+.|.+ ++|....  +. +.|. |.+||+|.
T Consensus        36 ~~~pC~~~~~~yCln-G~C~~i~~~~~-~~C~-C~~GYtG~   73 (79)
T 1xdt_R           36 KRDPCLRKYKDFCIH-GECKYVKELRA-PSCI-CHPGYHGE   73 (79)
T ss_dssp             ---CTTTTTTTCCSS-EEECCBGGGTB-CCEE-ECTTEEST
T ss_pred             cCCCCCccccCcCCC-CEeeeecCCCC-eEEE-cCCCcccc
Confidence            346777   688986 5995333  34 8999 99999985

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}

Probab=87.31  E-value=0.33  Score=41.15  Aligned_cols=30  Identities=30%  Similarity=0.618  Sum_probs=26.4

Q ss_pred             CCCCCCCCeeeec-CCceeeecCCCCccCCc
Q psy13147        125 HVYCGSNAVCKHT-NGIVTCECLPTYYGNGA  154 (180)
Q Consensus       125 ~~~C~~~~~C~~~-~g~~~C~C~~G~~g~~~  154 (180)
                      .++|+.++.|+.. .+.|.|.|+.||.|++.
T Consensus        26 ~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~   56 (551)
T 3fby_A           26 PSECHEHADCVLERDGSRSCVCAVGWAGNGI   56 (551)
T ss_dssp             BCCCCTTEEEEECTTSCEEEEECTTEESSSS
T ss_pred             CCCCCCCCeeEeCCCCCEecCCCCCCCCCCc
Confidence            3799999999975 67889999999999886

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=86.62  E-value=0.2  Score=39.80  Aligned_cols=36  Identities=17%  Similarity=0.376  Sum_probs=20.2

Q ss_pred             CCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcCC--CCCCC
Q psy13147         14 SLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW--LPHCR   53 (180)
Q Consensus        14 ~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~--~~~C~   53 (180)
                      +|||. ...|  ...|.|+.++ |+|. |.+||...  +..|.
T Consensus         1 i~ec~~~~~C--~~~C~n~~g~-~~C~-C~~g~~l~~d~~~C~   39 (349)
T 3v64_C            1 VNECAEEGYC--SQGCTNSEGA-FQCW-CEAGYELRPDRRSCK   39 (349)
T ss_dssp             --------CC--SSEECCC----CCEE-CCTTEEECTTSSCEE
T ss_pred             CcccCCCCCC--cCeeecCCCC-eEEE-CCCCccCCCCCCccc
Confidence            57886 4567  4689999999 9999 99999854  34553

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=86.34  E-value=0.59  Score=34.10  Aligned_cols=30  Identities=37%  Similarity=0.991  Sum_probs=24.1

Q ss_pred             CccCCCCCCeEeecCCCceeeCCCCCccCCCCCccC
Q psy13147         77 CQGTCGVNALCTVVHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        77 C~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      |...|.++|.|+.   ..+|.|++||.|.   .|+.
T Consensus       151 C~~~C~ngG~Cv~---P~~C~C~~Gw~G~---~C~~  180 (188)
T 2ygo_A          151 CPGGCRNGGFCNE---RRICECPDGFHGP---HCEG  180 (188)
T ss_dssp             CTTCCCTTCEECT---TSCEECCTTCBTT---TTCB
T ss_pred             cCCCCCCCCEeCC---CCcccCcCCCCCC---CCcC
Confidence            4457888899975   4589999999998   7865

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=85.71  E-value=0.49  Score=44.16  Aligned_cols=34  Identities=24%  Similarity=0.455  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeeecCCCC-CCCcCC
Q psy13147         13 DSLACKPNPCDPYSSCSVYSEHVAMCDPCS-GPQAPW   48 (180)
Q Consensus        13 d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~-~G~~g~   48 (180)
                      ..+.|.++||.++++|.....+ |.|. |+ +||+|.
T Consensus      1016 ~~~~C~~~pC~ngG~C~~~~~~-~~C~-C~~~g~~G~ 1050 (1245)
T 3qcw_A         1016 PSTTCQEDSCSNQGVCLQQWDG-FSCD-CSMTSFSGP 1050 (1245)
T ss_dssp             CCCCCCTTSSSSSCEEEEETTE-EEEE-CTTSSCBST
T ss_pred             ccCceECCcCCCCCEeCCCCCC-CEEE-CCCCCCCCC
Confidence            4578999999999999998777 9999 99 699985

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=84.64  E-value=0.52  Score=36.24  Aligned_cols=37  Identities=22%  Similarity=0.442  Sum_probs=27.1

Q ss_pred             CCCCCCC---CCCCCCCeeeecCCCeeecCCCCCCCcCCC--CCCC
Q psy13147         13 DSLACKP---NPCDPYSSCSVYSEHVAMCDPCSGPQAPWL--PHCR   53 (180)
Q Consensus        13 d~~~C~~---~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~--~~C~   53 (180)
                      +.|||..   ..|  ...|.++.++ |+|. |..||....  ..|.
T Consensus         1 ~~~eC~~~~~~~C--~~~C~~~~~~-~~C~-C~~G~~l~~d~~sC~   42 (283)
T 3f1s_B            1 AKNECHPERTDGC--QHFCLPGQES-YTCS-CAQGYRLGEDHKQCV   42 (283)
T ss_dssp             --CCCCSSCSSSC--SSBCCCCTTS-CCCB-CCTTEEECTTSSCEE
T ss_pred             CCCccCCCCCCCC--CCEeeCCCCC-eEec-CCCCcccCCCCCccc
Confidence            4688973   356  4689999998 9999 999998643  4564

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=82.60  E-value=0.73  Score=32.16  Aligned_cols=26  Identities=15%  Similarity=0.374  Sum_probs=21.4

Q ss_pred             CCCCCCeeeecC--CCee-ecCCCCCCCcCC
Q psy13147         21 PCDPYSSCSVYS--EHVA-MCDPCSGPQAPW   48 (180)
Q Consensus        21 ~C~~~~~C~~~~--~~~~-~C~~C~~G~~g~   48 (180)
                      ||.++++|+...  .. + .|. |++||.|.
T Consensus        14 pC~NGGtC~~~~~~s~-~~~C~-Cp~g~~G~   42 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSN-IHWCN-CPKKFGGQ   42 (145)
T ss_dssp             CCCTTCEEEECSSSTT-CEEEE-CCTTEEST
T ss_pred             CCCCCCCcCCCccccC-Ccccc-CCCCCCCC
Confidence            899999998752  34 6 899 99999984

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=82.15  E-value=1.2  Score=41.48  Aligned_cols=33  Identities=21%  Similarity=0.605  Sum_probs=29.6

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecC-CCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECL-PTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~-~G~~g~~  153 (180)
                      +.|...||.++++|.....+|.|.|+ +||.|..
T Consensus      1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~ 1051 (1245)
T 3qcw_A         1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL 1051 (1245)
T ss_dssp             CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTT
T ss_pred             CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCC
Confidence            67888999999999999999999999 6998863

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=80.56  E-value=1.5  Score=30.60  Aligned_cols=30  Identities=27%  Similarity=0.607  Sum_probs=24.1

Q ss_pred             CCCCCCeEeecC--CCc-eeeCCCCCccCCCCCccC
Q psy13147         80 TCGVNALCTVVH--HTP-ACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        80 ~C~~~~~C~~~~--g~~-~C~C~~g~~g~~~~~C~~  112 (180)
                      +|.++++|+...  ..+ +|.|++||.|.   .|+.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~---~Cei   46 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ---HCEI   46 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEEST---TSCE
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCC---ceec
Confidence            688899998752  455 89999999998   7864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	180
d1oiga_	26	g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanog	0.002

>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 26

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: DPY module
family: DPY module
domain: Dumpy
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 32.0 bits (72), Expect = 0.002
 Identities = 18/24 (75%), Positives = 20/24 (83%)

Query: 53 RPECLCNSDCPFNMACLGQKCRDP 76
          RPEC+ NSDCP N AC+ QKCRDP
Sbjct: 1  RPECVLNSDCPSNQACVNQKCRDP 24

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	180
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.92
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.89
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.81
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.8
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.79
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.75
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.71
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.7
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.64
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.63
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.59
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.57
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.56
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.52
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.49
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.48
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.44
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.4
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.4
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.39
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.35
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.32
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.31
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.27
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.26
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.2
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.2
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.19
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.15
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.13
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.12
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.12
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.1
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.05
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.04
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.98
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.98
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.92
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.88
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.86
d1szba2	45	Mannose-binding protein associated serine protease	97.82
d1szba2	45	Mannose-binding protein associated serine protease	97.81
d1nt0a3	45	Mannose-binding protein associated serine protease	97.79
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.77
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.57
d1nt0a3	45	Mannose-binding protein associated serine protease	97.56
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.52
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.46
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.36
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.34
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.23
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.17
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.07
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.07
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.03
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.99
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.79
d1oiga_	26	Dumpy {Fruit fly (Drosophila melanogaster) [TaxId:	95.39
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.97
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	94.59
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	94.44
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	94.12
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	93.79
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	93.58
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	93.46
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	93.4
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	93.16
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	93.15
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	93.05
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	92.95
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	92.52
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	92.27
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	90.83
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	89.78
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	87.24
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	87.05
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	83.09
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	83.07
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	81.42

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.3e-10  Score=63.20  Aligned_cols=41  Identities=17%  Similarity=0.182  Sum_probs=35.0

Q ss_pred             CCCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC
Q psy13147         11 SNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR   53 (180)
Q Consensus        11 ~~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~   53 (180)
                      ++|||||+..++..+++|+|++|+ |.|. |++||++++..|+
T Consensus         2 CvDidEC~~~~~~~~~~C~Nt~Gs-y~C~-C~~Gy~~~g~~C~   42 (43)
T d1emoa1           2 AVDMDECKEPDVCKHGQCINTDGS-YRCE-CPFGYILAGNECV   42 (43)
T ss_dssp             CCCCCSSSSTTSCSSSCCCCCSSC-CCCC-CCTTEEESSSCEE
T ss_pred             CcceeccCCcCCCCCCEeECCCCC-eEeE-CCCCcccCCCccc
Confidence            689999996666678999999999 9999 9999998765553

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=6.5e-10  Score=60.03  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=32.7

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +|+|+|.++||.++++|++..++ |+|. |++||+|.
T Consensus         1 id~d~C~~~PC~ngg~C~~~~~~-y~C~-C~~g~~G~   35 (39)
T d1edmb_           1 VDGDQCESNPCLNGGSCKDDINS-YECW-CPFGFEGK   35 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEEETTE-EEEE-CCTTCCST
T ss_pred             CccccCCCCCCCCCcEEEcCCCC-EEEE-CCCCCCCC
Confidence            58999999999999999999888 9999 99999985

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.5e-09  Score=59.58  Aligned_cols=35  Identities=23%  Similarity=0.428  Sum_probs=32.3

Q ss_pred             CCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      .|||||.  ++||+++++|+++.++ |+|. |++||+|.
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~-y~C~-C~~G~~G~   37 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGS-FECQ-CLQGYTGP   37 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSS-EEEE-CCTTEEST
T ss_pred             CCCccccCCCCCCCCCcEeECCCCC-EEeE-CCCCCcCC
Confidence            4899998  6899999999999999 9999 99999985

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=9.4e-10  Score=60.70  Aligned_cols=39  Identities=26%  Similarity=0.516  Sum_probs=31.7

Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCCCCccCCcCCCcc
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRP  159 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~d  159 (180)
                      +|||...++..+++|+|++|+|.|.|++||.+++. .|+|
T Consensus         5 idEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g~-~C~D   43 (43)
T d1emoa1           5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGN-ECVD   43 (43)
T ss_dssp             CCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESSS-CEEE
T ss_pred             eeccCCcCCCCCCEeECCCCCeEeECCCCcccCCC-cccC
Confidence            49997655556789999999999999999998765 4543

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.79  E-value=8.7e-10  Score=58.79  Aligned_cols=34  Identities=24%  Similarity=0.462  Sum_probs=32.0

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         13 DSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        13 d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      |+|+|.++||.++++|++..++ |+|. |++||+|.
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~-y~C~-C~~g~~G~   34 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQS-YICF-CLPAFEGR   34 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTE-EEEE-CCTTEEST
T ss_pred             CcccCCCCCCCCCCEEECCCCC-eEEE-CCCCCcCC
Confidence            7899999999999999998888 9999 99999985

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=3.3e-09  Score=57.13  Aligned_cols=33  Identities=21%  Similarity=0.374  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         14 SLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      ||+|.++||+++++|++..++ |+|. |++||+|.
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~-y~C~-C~~G~~G~   33 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGE-FQCI-CMPGYEGV   33 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSC-EEEE-CCTTEESS
T ss_pred             CcCCcCCCCCCCCEEECCCCC-EEEe-CCCCCccC
Confidence            689999999999999999888 9999 99999985

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=8.7e-09  Score=55.46  Aligned_cols=34  Identities=21%  Similarity=0.475  Sum_probs=31.8

Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|+|.++||.++++|++..++|+|.|++||.|..
T Consensus         3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~   36 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKN   36 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred             cccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCC
Confidence            4999999999999999999999999999999863

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=7.2e-09  Score=56.80  Aligned_cols=33  Identities=30%  Similarity=0.694  Sum_probs=30.5

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      +|||.  ++||.++++|+++.++|+|.|++||.|.
T Consensus         3 ideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~   37 (42)
T d2vj3a1           3 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP   37 (42)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST
T ss_pred             CccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC
Confidence            49996  5899999999999999999999999986

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.4e-08  Score=54.56  Aligned_cols=34  Identities=32%  Similarity=0.680  Sum_probs=31.5

Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ||+|.++||.+++.|++..++|+|.|++||.|..
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~   34 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVH   34 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSS
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCc
Confidence            3899999999999999999999999999999873

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=4.6e-09  Score=56.76  Aligned_cols=33  Identities=30%  Similarity=0.731  Sum_probs=29.2

Q ss_pred             CCCCCCCeeeecCCceeeecCCCCccCCcCCCcc
Q psy13147        126 VYCGSNAVCKHTNGIVTCECLPTYYGNGALGCRP  159 (180)
Q Consensus       126 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~d  159 (180)
                      +.|+.+|.|+|++|+|.|+|++||.|++. .|++
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG~-~C~~   39 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGNGR-QCVA   39 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEECSS-SEEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCCCC-EeeC
Confidence            56888999999999999999999999997 4654

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.59  E-value=1.2e-08  Score=54.15  Aligned_cols=33  Identities=27%  Similarity=0.675  Sum_probs=31.2

Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      +|+|.++||.++++|++..++|.|+|++||.|.
T Consensus         2 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   34 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR   34 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEEST
T ss_pred             cccCCCCCCCCCCEEECCCCCeEEECCCCCcCC
Confidence            399999999999999999999999999999986

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=2e-08  Score=52.68  Aligned_cols=32  Identities=19%  Similarity=0.426  Sum_probs=29.8

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         15 LACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      |+|.++||.++++|++..++ |+|. |++||+|.
T Consensus         1 d~C~~~PC~ngg~C~~~~~~-y~C~-C~~g~~G~   32 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINE-FQCE-CPTGFTGH   32 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSC-EEEE-CCTTEESS
T ss_pred             CCCCCCCCCCCcEEECCCCC-eEEE-CCCCCCCC
Confidence            68999999999999999888 9999 99999985

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-08  Score=55.70  Aligned_cols=34  Identities=21%  Similarity=0.490  Sum_probs=29.8

Q ss_pred             CCCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +|||||+  +.+|. +++|+|++|+ |+|. |++||+++
T Consensus         1 TDidEC~~~~~~C~-~~~C~Nt~Gs-y~C~-C~~Gy~~~   36 (44)
T d1lmja1           1 TDIDECRISPDLCG-RGQCVNTPGD-FECK-CDEGYESG   36 (44)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTE-EEEC-CCSSEEEC
T ss_pred             CcccccCCCCCCCC-CCEeEcCCCC-eEEe-CCCCCccC
Confidence            5899998  45675 6899999999 9999 99999986

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.9e-08  Score=54.00  Aligned_cols=32  Identities=19%  Similarity=0.393  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         15 LACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      |+|.++||+++++|++..++ |+|. |++||+|.
T Consensus         1 D~C~~~PC~ngg~C~~~~~~-y~C~-C~~G~~G~   32 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGE-YTCT-CLEGFEGK   32 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSS-CCEE-CCTTEETT
T ss_pred             CcCCCCCCCCCcEEECCCCC-EEEE-CCCCCCcC
Confidence            68999999999999999888 9999 99999985

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6e-08  Score=50.79  Aligned_cols=32  Identities=25%  Similarity=0.594  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      |+|.++||.++++|++..++|+|.|++||.|.
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   32 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGH   32 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESS
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCC
Confidence            57888999999999999999999999999986

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.2e-08  Score=55.08  Aligned_cols=35  Identities=23%  Similarity=0.460  Sum_probs=29.2

Q ss_pred             CCCCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         12 NDSLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        12 ~d~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      +|||||+ ++.+ .++.|+|++|+ |.|. |++||.+..
T Consensus         1 TDidEC~~~~~~-c~~~C~Nt~G~-y~C~-C~~Gy~l~~   36 (43)
T d1uzka1           1 TDVNECLDPTTC-ISGNCVNTPGS-YICD-CPPDFELNP   36 (43)
T ss_dssp             CCCCGGGSTTSS-BTSEEEEETTE-EEEE-CCTTCEECT
T ss_pred             CCccccCCCCcC-cCCEeECCCCC-EEEe-cCCCCEECC
Confidence            5899998 4444 47899999999 9999 999998754

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.6e-08  Score=51.83  Aligned_cols=33  Identities=30%  Similarity=0.752  Sum_probs=30.5

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      |+|.++||.+++.|++..++|.|.|++||.|..
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~   33 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN   33 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTT
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCc
Confidence            578889999999999999999999999999874

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=2.3e-08  Score=53.92  Aligned_cols=33  Identities=18%  Similarity=0.429  Sum_probs=29.6

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCCCCCCC
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCR   53 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~~~C~   53 (180)
                      .+.|+.++.|+|++++ |.|. |++||+|++..|+
T Consensus         6 ~~~C~~~A~C~Nt~Gs-y~C~-C~~Gy~GdG~~C~   38 (40)
T d1gl4a2           6 RHQCSVHAECRDYATG-FCCR-CVANYTGNGRQCV   38 (40)
T ss_dssp             GGGSCTTEEEEECSSC-EEEE-ECTTEEECSSSEE
T ss_pred             CCCCCCCCEeecCCCC-eEeE-CCCCCcCCCCEee
Confidence            4678999999999999 9999 9999999987765

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=3.6e-08  Score=53.87  Aligned_cols=34  Identities=21%  Similarity=0.386  Sum_probs=29.1

Q ss_pred             CCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         13 DSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        13 d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      |||||+  +..|. ++.|+|++|+ |+|. |++||+...
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gs-y~C~-C~~Gy~l~~   36 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGS-YRCE-CPPGHQLSP   36 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTE-EEEE-SCTTSCCCS
T ss_pred             CccccCCCCCCCC-CCEeECCCCC-eEEe-CCCCCeECc
Confidence            689998  56674 7899999999 9999 999998653

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=9.5e-08  Score=52.54  Aligned_cols=33  Identities=27%  Similarity=0.590  Sum_probs=27.8

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||.  +..|. ++.|+|++|+|+|.|++||.++.
T Consensus         3 idEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           3 IDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             ccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            49995  35674 68999999999999999999864

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.4e-07  Score=51.74  Aligned_cols=33  Identities=30%  Similarity=0.640  Sum_probs=26.8

Q ss_pred             CCCCCC-CCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCDH-VYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||.. ..+ .++.|+|++|+|.|.|++||.++.
T Consensus         3 idEC~~~~~~-c~~~C~Nt~G~y~C~C~~Gy~l~~   36 (43)
T d1uzka1           3 VNECLDPTTC-ISGNCVNTPGSYICDCPPDFELNP   36 (43)
T ss_dssp             CCGGGSTTSS-BTSEEEEETTEEEEECCTTCEECT
T ss_pred             ccccCCCCcC-cCCEeECCCCCEEEecCCCCEECC
Confidence            499964 333 468999999999999999998754

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2e-07  Score=53.47  Aligned_cols=35  Identities=17%  Similarity=0.280  Sum_probs=27.6

Q ss_pred             CCCCCCC--CCCCC------CCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACK--PNPCD------PYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~--~~~C~------~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +|||||.  ...|.      ..+.|+|++|+ |+|. |++||++.
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~Gs-Y~C~-C~~Gy~l~   44 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGG-YFCS-CRPGYELQ   44 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTE-EEEE-CSTTCEEC
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCC-eEeE-CCCCCeEC
Confidence            6999998  33342      23589999999 9999 99999854

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.2e-07  Score=51.72  Aligned_cols=33  Identities=30%  Similarity=0.697  Sum_probs=27.2

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||.  +..|. ++.|+|++|+|+|.|++||....
T Consensus         2 idEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~~   36 (42)
T d1lmja2           2 IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP   36 (42)
T ss_dssp             CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred             ccccCCCCCCCC-CCEeECCCCCeEEeCCCCCeECc
Confidence            38884  46674 68999999999999999998643

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.27  E-value=2e-07  Score=50.76  Aligned_cols=35  Identities=20%  Similarity=0.395  Sum_probs=29.4

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeeecCCCCC-CCcCC
Q psy13147         13 DSLACKPNPCDPYSSCSVYSEHVAMCDPCSG-PQAPW   48 (180)
Q Consensus        13 d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~-G~~g~   48 (180)
                      +||+|.++||+++++|++...+.|+|. |++ ||+|.
T Consensus         1 Pid~C~~nPC~ngG~C~~~~~~~y~C~-C~~~G~~G~   36 (42)
T d1q4ga2           1 PVNPCCYYPCQHQGICVRFGLDRYQCD-CTRTGYSGP   36 (42)
T ss_dssp             CCCGGGGCCCCTTCEEEEETTTEEEEE-CTTSSEETT
T ss_pred             CCccCcCCCCCCCCEeeeCCCCCEEEE-CCCCCcCCc
Confidence            478999999999999997643349999 986 99985

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=6.3e-08  Score=51.96  Aligned_cols=32  Identities=19%  Similarity=0.447  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         15 LACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      ++|.++||.++++|++..++ |+|. |++||+|.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~-~~C~-C~~g~~G~   33 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINN-YTCK-CDPGFSGL   33 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTE-EEEE-ECTTEEST
T ss_pred             CcccCCcCCCCcEEECCCCC-EEEe-CCCCCcCc
Confidence            68999999999999998887 9999 99999985

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.9e-07  Score=49.98  Aligned_cols=33  Identities=27%  Similarity=0.649  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +.|.++||.++++|++..++|+|.|++||.|..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~   34 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLK   34 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTT
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcC
Confidence            568889999999999999999999999999973

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.4e-07  Score=50.78  Aligned_cols=32  Identities=16%  Similarity=0.305  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         15 LACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +.|.++||.++++|++..++ |+|. |++||+|.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~-y~C~-C~~g~~G~   33 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGN-YTCS-CYPGFYGP   33 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSS-EEEE-ECTTEEST
T ss_pred             CcccCCcCCCCcEEECCCCC-eEEe-CCCCccCC
Confidence            67999999999999999888 9999 99999985

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1.2e-07  Score=51.97  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=28.9

Q ss_pred             CCCCCC--CCCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         13 DSLACK--PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        13 d~~~C~--~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      |||||+  +..|. ++.|+|++|+ |+|. |++||+...
T Consensus         2 DinEC~~~~~~c~-~~~C~Nt~Gs-y~C~-C~~Gy~l~~   37 (43)
T d1uzka2           2 DIDECQELPGLCQ-GGKCINTFGS-FQCR-CPTGYYLNE   37 (43)
T ss_dssp             ECCHHHHCGGGGB-TSEEEECSSC-EEEE-CCTTCCBCT
T ss_pred             CcccccCCCCCcC-CCEEECCCCC-eEeE-CCCCCeECc
Confidence            799998  45674 6799999999 9999 999998753

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.8e-07  Score=50.21  Aligned_cols=33  Identities=21%  Similarity=0.297  Sum_probs=28.8

Q ss_pred             CCCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         13 DSLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        13 d~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      |||||+ .++|  .+.|+|++|+ |+|. |++||++.+
T Consensus         1 DidEC~~~~~C--~~~C~N~~Gs-y~C~-C~~Gy~l~g   34 (40)
T d1dx5i3           1 DIDECENGGFC--SGVCHNLPGT-FECI-CGPDSALAG   34 (40)
T ss_dssp             ECCHHHHCSSC--SSEEEECSSS-EEEE-ECSSSSCEE
T ss_pred             CccccCCCcCc--cCEeeCCCCC-eEeE-CCCCCeeCC
Confidence            689998 6788  4799999999 9999 999999754

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.4e-06  Score=49.75  Aligned_cols=34  Identities=21%  Similarity=0.410  Sum_probs=25.4

Q ss_pred             CCCCCC--CCC------CCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCDH--VYC------GSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~--~~C------~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||..  ..|      +....|+|++|+|.|.|++||+++.
T Consensus         4 idEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~   45 (53)
T d1apqa_           4 LDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQE   45 (53)
T ss_dssp             CCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECT
T ss_pred             cccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECC
Confidence            488852  223      2345899999999999999998543

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=3.5e-07  Score=51.10  Aligned_cols=34  Identities=18%  Similarity=0.278  Sum_probs=30.2

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +.+++|.++||.+ ++|++..++ |+|. |++||+|.
T Consensus         6 p~~~~C~~~PC~n-G~C~~~~~~-y~C~-C~~G~~G~   39 (48)
T d1autl1           6 PLEHPCASLCCGH-GTCIDGIGS-FSCD-CRSGWEGR   39 (48)
T ss_dssp             SSCCSSSSTTTTS-EEECCCSSC-CCEE-ECTTEEST
T ss_pred             CCCCcccCCCCCC-CEEECCCCC-CeEe-CCCCCcCC
Confidence            4578999999985 899999888 9999 99999985

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.1e-07  Score=48.91  Aligned_cols=33  Identities=33%  Similarity=0.869  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +.|.++||.++++|++..++|+|.|++||.|..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~   34 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE   34 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTT
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCCC
Confidence            467788999999999999999999999999974

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=2.7e-07  Score=50.48  Aligned_cols=33  Identities=30%  Similarity=0.667  Sum_probs=27.1

Q ss_pred             CCCCC--CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCD--HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||.  +..|. ++.|+|++|+|+|.|++||..+.
T Consensus         3 inEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~~   37 (43)
T d1uzka2           3 IDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLNE   37 (43)
T ss_dssp             CCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBCT
T ss_pred             cccccCCCCCcC-CCEEECCCCCeEeECCCCCeECc
Confidence            49995  45674 57999999999999999998654

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=8.9e-07  Score=49.40  Aligned_cols=33  Identities=27%  Similarity=0.780  Sum_probs=29.8

Q ss_pred             CCCCCCCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCDHVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +++|.++||.+ ++|++..++|+|.|++||.|..
T Consensus         8 ~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~   40 (48)
T d1autl1           8 EHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRF   40 (48)
T ss_dssp             CCSSSSTTTTS-EEECCCSSCCCEEECTTEESTT
T ss_pred             CCcccCCCCCC-CEEECCCCCCeEeCCCCCcCCC
Confidence            58999999975 8999999999999999999873

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=3.5e-07  Score=49.00  Aligned_cols=32  Identities=28%  Similarity=0.707  Sum_probs=26.7

Q ss_pred             CCCCC-CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||. ..+|.  +.|+|++|+|+|.|++||++.+
T Consensus         2 idEC~~~~~C~--~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           2 IDECENGGFCS--GVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             CCHHHHCSSCS--SEEEECSSSEEEEECSSSSCEE
T ss_pred             ccccCCCcCcc--CEeeCCCCCeEeECCCCCeeCC
Confidence            38884 46774  6999999999999999998754

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=1.4e-06  Score=47.07  Aligned_cols=32  Identities=25%  Similarity=0.540  Sum_probs=27.6

Q ss_pred             CCCCCCCCCCCCeeeecC-CCeeecCCCC-CCCcCC
Q psy13147         15 LACKPNPCDPYSSCSVYS-EHVAMCDPCS-GPQAPW   48 (180)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~-~~~~~C~~C~-~G~~g~   48 (180)
                      |+|.++||+++++|++.. ++ |+|. |+ +||+|.
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~-y~C~-C~~~gy~G~   35 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQ-YKCD-CTRTGFYGE   35 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTE-EEEE-CTTSSEETT
T ss_pred             CcCcCCCCCCCCEEEECCCCC-EEEe-CcCCCcCCc
Confidence            789999999999999764 55 9999 96 699985

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.7e-06  Score=46.70  Aligned_cols=32  Identities=19%  Similarity=0.382  Sum_probs=27.2

Q ss_pred             CCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         14 SLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        14 ~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      ||||+ +++|  ...|+|+.++ |+|. |++||+...
T Consensus         1 idEC~~~~~C--~~~C~n~~Gs-y~C~-C~~Gy~L~~   33 (41)
T d1i0ua2           1 IDECQDPDTC--SQLCVNLEGG-YKCQ-CEEGFQLDP   33 (41)
T ss_dssp             CCTTTTTTSC--SSCEECSSSC-CEEC-CCTTEEECT
T ss_pred             CccCCCCCCC--CCEeECCCCC-EEeE-CCCCCeECC
Confidence            68997 5677  5799999999 9999 999998753

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.98  E-value=1.9e-06  Score=46.75  Aligned_cols=34  Identities=26%  Similarity=0.611  Sum_probs=29.6

Q ss_pred             CCCCCCCCCCCCCeeeec-CCceeeecCC-CCccCC
Q psy13147        120 PNPCDHVYCGSNAVCKHT-NGIVTCECLP-TYYGNG  153 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~-~g~~~C~C~~-G~~g~~  153 (180)
                      +|+|.++||.++++|++. .++|+|.|+. ||.|..
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~   37 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPN   37 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTT
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcC
Confidence            388999999999999975 6899999986 899873

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=4.3e-06  Score=45.01  Aligned_cols=31  Identities=19%  Similarity=0.304  Sum_probs=25.8

Q ss_pred             CCCCCCCCCCeeeecC-CCeeecCCCCCCCcCC
Q psy13147         17 CKPNPCDPYSSCSVYS-EHVAMCDPCSGPQAPW   48 (180)
Q Consensus        17 C~~~~C~~~~~C~~~~-~~~~~C~~C~~G~~g~   48 (180)
                      |.++||+++++|++.. ...|+|. |++||+|.
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~-C~~g~~G~   32 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQ-CPEGFAGK   32 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEE-CCTTCBSS
T ss_pred             CcCCCCCCCCEEecCCCCCCeEEC-CCCCCCCC
Confidence            6789999999999764 2239999 99999985

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.1e-05  Score=43.37  Aligned_cols=31  Identities=19%  Similarity=0.611  Sum_probs=26.4

Q ss_pred             CCCCCCCCCCeeeec--CCceeeecCCCCccCC
Q psy13147        123 CDHVYCGSNAVCKHT--NGIVTCECLPTYYGNG  153 (180)
Q Consensus       123 C~~~~C~~~~~C~~~--~g~~~C~C~~G~~g~~  153 (180)
                      |.++||.++++|++.  .++|+|.|++||.|..
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~   33 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKS   33 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCBSSS
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCCCCC
Confidence            456899999999975  4689999999999974

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.6e-06  Score=44.93  Aligned_cols=32  Identities=19%  Similarity=0.529  Sum_probs=26.1

Q ss_pred             CCCCC-CCCCCCCCeeeecCCceeeecCCCCccCC
Q psy13147        120 PNPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       120 ~d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      +|||. +.+|.  ..|+|++|+|+|.|++||....
T Consensus         1 idEC~~~~~C~--~~C~n~~Gsy~C~C~~Gy~L~~   33 (41)
T d1i0ua2           1 IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDP   33 (41)
T ss_dssp             CCTTTTTTSCS--SCEECSSSCCEECCCTTEEECT
T ss_pred             CccCCCCCCCC--CEeECCCCCEEeECCCCCeECC
Confidence            37885 46674  5999999999999999998653

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=8.8e-06  Score=44.67  Aligned_cols=32  Identities=19%  Similarity=0.410  Sum_probs=24.6

Q ss_pred             CCCCCC---CCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDHV---YCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~~---~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      |||...   ..+-.+.|+|++|+|+|.|++||...
T Consensus         2 dEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~   36 (45)
T d1szba2           2 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLH   36 (45)
T ss_dssp             CTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEEC
T ss_pred             cCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeEC
Confidence            778532   22335799999999999999999854

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=4.5e-06  Score=45.90  Aligned_cols=33  Identities=12%  Similarity=0.139  Sum_probs=26.1

Q ss_pred             CCCCCCC---CCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         14 SLACKPN---PCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        14 ~~~C~~~---~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      ||||+..   .+.-.+.|+|++++ |+|. |++||+..
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gs-y~C~-C~~Gy~l~   36 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGG-FYCS-CRAGYVLH   36 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTE-EEEE-CCTTEEEC
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCC-eEEE-CCCCCeEC
Confidence            6889732   22346799999999 9999 99999864

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.79  E-value=7.6e-06  Score=44.96  Aligned_cols=32  Identities=19%  Similarity=0.397  Sum_probs=23.4

Q ss_pred             CCCCCC---CCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDHV---YCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~~---~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      |||...   ...-.+.|+|++|+|+|.|++||...
T Consensus         2 dEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~   36 (45)
T d1nt0a3           2 DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILH   36 (45)
T ss_dssp             CTTC-------CCSSEEEEETTEEEEECCTTEEEC
T ss_pred             cCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEEC
Confidence            778531   22335699999999999999999854

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.77  E-value=1.1e-05  Score=43.31  Aligned_cols=33  Identities=30%  Similarity=0.759  Sum_probs=28.7

Q ss_pred             CCCCCCCCCCCCeeeec-CCceeeecC-CCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKHT-NGIVTCECL-PTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~~-~g~~~C~C~-~G~~g~~  153 (180)
                      |+|.++||.++++|++. .++|+|.|+ +||.|..
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~   36 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGEN   36 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTT
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcC
Confidence            67888999999999975 689999997 6999873

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=4.2e-05  Score=38.89  Aligned_cols=33  Identities=24%  Similarity=0.511  Sum_probs=28.5

Q ss_pred             CCCCC-CCCCCCCCeeeecCCCeeecCCCCCCCcCCC
Q psy13147         14 SLACK-PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        14 ~~~C~-~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~~   49 (180)
                      .|||+ .+||+ +++|.|..++ |.|. |..||...+
T Consensus         1 tdECsignpCG-nGTCtNviGg-Fec~-C~~GFepgp   34 (39)
T d1emoa2           1 TDECSVGNPCG-NGTCKNVIGG-FECT-CEEGFEPGP   34 (39)
T ss_dssp             CCGGGTTCSSS-SSCEEECSSS-EEEC-CSSSSCCCS
T ss_pred             CCccccCCccC-Cceeeecccc-eEEe-ecCCcCCCc
Confidence            36888 78997 7999999999 9999 999998643

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.56  E-value=1.6e-05  Score=43.63  Aligned_cols=33  Identities=15%  Similarity=0.253  Sum_probs=24.6

Q ss_pred             CCCCCCC---CCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         14 SLACKPN---PCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        14 ~~~C~~~---~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      ||||+..   .+.-.+.|+|++++ |+|+ |++||+..
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gs-y~C~-C~~Gy~L~   36 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGG-YYCS-CRVGYILH   36 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTE-EEEE-CCTTEEEC
T ss_pred             CcCCccCCCCcCCCCCEeecCCCC-EEEe-CCCCCEEC
Confidence            6889732   23336799999999 9999 99999854

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=4.9e-06  Score=49.18  Aligned_cols=35  Identities=11%  Similarity=0.192  Sum_probs=28.4

Q ss_pred             CCCCCCCCCCCCCCeeee-----cCCCeeecCCCCCCCcCCC
Q psy13147         13 DSLACKPNPCDPYSSCSV-----YSEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        13 d~~~C~~~~C~~~~~C~~-----~~~~~~~C~~C~~G~~g~~   49 (180)
                      +.++|.+++|+++|+|..     ..++ |.|. |++||+|..
T Consensus         5 ~c~ec~~~~C~NgG~C~~~~~~~~~~~-y~C~-C~~gy~G~~   44 (63)
T d1haea_           5 KCAEKEKTFCVNGGECFMVKDLSNPSR-YLCK-CQPGFTGAR   44 (63)
T ss_dssp             ECCHHHHTTSCTTCEEEEEESSSSSCC-EEEE-CCTTEESTT
T ss_pred             cCCCCcCCcCCCCCEEeecccccCCCC-EEeE-CCCCCCCCC
Confidence            567788899999999963     3445 9999 999999863

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=6.2e-05  Score=40.45  Aligned_cols=30  Identities=33%  Similarity=0.801  Sum_probs=23.9

Q ss_pred             CCCCC---CCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDH---VYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      |||..   .+|.  ..|+|++|+|+|.|+.||...
T Consensus         1 dEC~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~L~   33 (42)
T d1nzia2           1 NECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH   33 (42)
T ss_dssp             CTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred             CCCCCCCCcCCC--CEeecCCCCEEEeCCCCCEEC
Confidence            46642   4674  499999999999999999864

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=3e-05  Score=41.30  Aligned_cols=30  Identities=23%  Similarity=0.371  Sum_probs=24.6

Q ss_pred             CCCCC--CCCCCCCeeeecCCceeeecCCCCccC
Q psy13147        121 NPCDH--VYCGSNAVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       121 d~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      |||..  ..|.  ..|++++++|+|.|++||...
T Consensus         3 neC~~~nggC~--h~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           3 NECLDNNGGCS--HVCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             CGGGTGGGGCS--SEEEECSSSEEEECCTTCCEE
T ss_pred             ccCCCCCCCCc--CEEEcCCCCEEEECCCCCEEC
Confidence            77853  4574  599999999999999999763

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=0.00012  Score=41.33  Aligned_cols=34  Identities=12%  Similarity=0.106  Sum_probs=27.0

Q ss_pred             CCCCCCCCCCCCCeeeecCC-CeeecCCCCCCCcCC
Q psy13147         14 SLACKPNPCDPYSSCSVYSE-HVAMCDPCSGPQAPW   48 (180)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~-~~~~C~~C~~G~~g~   48 (180)
                      -.+|.+++|.++|+|....+ ..|+|. |++||+|.
T Consensus         6 C~~c~~~~C~NgG~C~~~~~~~~~~C~-C~~gy~G~   40 (53)
T d3egfa_           6 CPSSYDGYCLNGGVCMHIESLDSYTCN-CVIGYSGD   40 (53)
T ss_dssp             CCTTSSCCSCSSCEEEEESSSSCEEEE-CCTTCCSS
T ss_pred             CCCCCCCCCCCCcEeeccCCCCCeEeE-CCCCCcCC
Confidence            34666889999999986543 239999 99999985

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=3.3e-05  Score=45.46  Aligned_cols=33  Identities=18%  Similarity=0.543  Sum_probs=28.3

Q ss_pred             CCCCCCCCCCCCeee-----ecCCceeeecCCCCccCC
Q psy13147        121 NPCDHVYCGSNAVCK-----HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~-----~~~g~~~C~C~~G~~g~~  153 (180)
                      ++|..++|.+++.|.     +..++|.|+|++||.|..
T Consensus         7 ~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~   44 (63)
T d1haea_           7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR   44 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTT
T ss_pred             CCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCC
Confidence            667778999999995     556899999999999974

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0001  Score=39.59  Aligned_cols=30  Identities=20%  Similarity=0.504  Sum_probs=24.7

Q ss_pred             CCCC---CCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         15 LACK---PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        15 ~~C~---~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      |||+   ..+|  ...|+|++++ |+|. |++||++.
T Consensus         1 dEC~~~~~~~C--~~~C~n~~Gs-y~C~-C~~Gy~L~   33 (42)
T d1nzia2           1 NECTDFVDVPC--SHFCNNFIGG-YFCS-CPPEYFLH   33 (42)
T ss_dssp             CTTTC-CCCCS--SSEEEEETTE-EEEE-CCTTCEEC
T ss_pred             CCCCCCCCcCC--CCEeecCCCC-EEEe-CCCCCEEC
Confidence            5786   2467  4699999999 9999 99999864

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=8.4e-05  Score=39.48  Aligned_cols=31  Identities=16%  Similarity=0.280  Sum_probs=25.7

Q ss_pred             CCCCCC--CCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         14 SLACKP--NPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        14 ~~~C~~--~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +|||..  ..|  ...|+|++++ |+|. |++||+..
T Consensus         2 ~neC~~~nggC--~h~C~n~~g~-~~C~-C~~Gy~L~   34 (40)
T d3bpse1           2 TNECLDNNGGC--SHVCNDLKIG-YECL-CPDGFQLV   34 (40)
T ss_dssp             SCGGGTGGGGC--SSEEEECSSS-EEEE-CCTTCCEE
T ss_pred             cccCCCCCCCC--cCEEEcCCCC-EEEE-CCCCCEEC
Confidence            578874  456  5799999999 9999 99999863

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.00032  Score=39.49  Aligned_cols=33  Identities=30%  Similarity=0.647  Sum_probs=26.9

Q ss_pred             CCCCCCCCCCCCeeee--cCCceeeecCCCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKH--TNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~--~~g~~~C~C~~G~~g~~  153 (180)
                      ++|.+++|.++++|+.  ...+|+|.|++||.|..
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~   41 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDR   41 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSS
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCC
Confidence            4455689999999984  45689999999999973

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00028  Score=35.72  Aligned_cols=33  Identities=27%  Similarity=0.627  Sum_probs=26.9

Q ss_pred             CCCC-CCCCCCCCeeeecCCceeeecCCCCccCCc
Q psy13147        121 NPCD-HVYCGSNAVCKHTNGIVTCECLPTYYGNGA  154 (180)
Q Consensus       121 d~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  154 (180)
                      |||. .+||+ +++|.|..|+|.|.|..||...+.
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFepgpm   35 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGPM   35 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCSS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcCCCcc
Confidence            5674 47896 589999999999999999975443

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00013  Score=40.29  Aligned_cols=34  Identities=12%  Similarity=0.121  Sum_probs=27.2

Q ss_pred             CCCCCCCCCCCCCeeeecCC-CeeecCCCCCCCcCC
Q psy13147         14 SLACKPNPCDPYSSCSVYSE-HVAMCDPCSGPQAPW   48 (180)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~-~~~~C~~C~~G~~g~   48 (180)
                      .++|.+++|.++|+|+.... ..|+|. |++||+|.
T Consensus         4 C~~c~~~~C~ngG~C~~~~~~~~~~C~-C~~gy~G~   38 (48)
T d1nqlb_           4 CPLSHDGYCLHDGVCMYIEALDKYACN-CVVGYIGE   38 (48)
T ss_dssp             CCSTTCCEECTTCEEEEETTTTEEEEE-ECTTEEST
T ss_pred             CCCCCCCCCCCCcEEeeeCCCCCeEEe-CCCCcccC
Confidence            35667889999999987543 349999 99999985

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00032  Score=38.68  Aligned_cols=33  Identities=24%  Similarity=0.552  Sum_probs=26.8

Q ss_pred             CCCCCCCCCCCCeeee--cCCceeeecCCCCccCC
Q psy13147        121 NPCDHVYCGSNAVCKH--TNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~~~C~~~~~C~~--~~g~~~C~C~~G~~g~~  153 (180)
                      ++|..++|.++++|+.  ..++|+|+|++||+|..
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~   39 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGER   39 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTTEESTT
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccCC
Confidence            4455688999999985  45789999999999873

>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: DPY module
family: DPY module
domain: Dumpy
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.39  E-value=0.005  Score=27.84  Aligned_cols=22  Identities=55%  Similarity=1.235  Sum_probs=19.6

Q ss_pred             cCCcCCCCCCCCCcccCCcccC
Q psy13147        159 PECVLNTDCPNSAACINNSIIE  180 (180)
Q Consensus       159 deC~~~~~C~~~~~C~n~~~~~  180 (180)
                      +||..+.+|..++.|+|-.|+|
T Consensus         2 pecvl~sdcpsn~acvnqkcrd   23 (26)
T d1oiga_           2 PECVLNSDCPSNQACVNQKCRD   23 (26)
T ss_dssp             CSCCSSTTSSTTCEECSSSEEC
T ss_pred             CceeEcCCCCccHhHhcccccC
Confidence            5899888999999999999875

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.0089  Score=32.85  Aligned_cols=29  Identities=17%  Similarity=0.152  Sum_probs=24.0

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      .+.|.+++.|.....+.+.|. |+.||+|.
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~-C~~gy~G~   41 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCV-CDEGYIGA   41 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEEC-CCTTEETT
T ss_pred             CCCccCCeEEEeCCCCCcEeE-CCCCCeeC
Confidence            578998888876665559999 99999985

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.59  E-value=0.02  Score=31.33  Aligned_cols=28  Identities=18%  Similarity=0.305  Sum_probs=22.9

Q ss_pred             CeEeecCCCceeeCCCCCccCC-CCCccC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      ..|++++++|+|.|+.||.... ...|+.
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~   39 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDDLLQCHP   39 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             cEeecCCCCeEEECCCCCEECCCCCcccc
Confidence            6899999999999999998754 236765

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.012  Score=32.29  Aligned_cols=21  Identities=29%  Similarity=0.610  Sum_probs=19.2

Q ss_pred             CeeeecCCceeeecCCCCccC
Q psy13147        132 AVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       132 ~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ..|++++++|+|.|+.||...
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~   31 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLG   31 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEEC
T ss_pred             cEeecCCCCeEEECCCCCEEC
Confidence            589999999999999999864

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.12  E-value=0.014  Score=32.20  Aligned_cols=22  Identities=23%  Similarity=0.551  Sum_probs=19.4

Q ss_pred             CeeeecCCceeeecCCCCccCC
Q psy13147        132 AVCKHTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       132 ~~C~~~~g~~~C~C~~G~~g~~  153 (180)
                      ..|++++++|+|.|+.||....
T Consensus        12 h~C~n~~g~~~C~C~~Gy~L~~   33 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYTLAD   33 (51)
T ss_dssp             SEEEEETTEEEEECCTTEEECT
T ss_pred             cEeecCCCCeEeEcCCCCEECC
Confidence            4899999999999999998643

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.79  E-value=0.024  Score=31.10  Aligned_cols=21  Identities=24%  Similarity=0.605  Sum_probs=18.6

Q ss_pred             CeeeecCCceeeecCCCCccC
Q psy13147        132 AVCKHTNGIVTCECLPTYYGN  152 (180)
Q Consensus       132 ~~C~~~~g~~~C~C~~G~~g~  152 (180)
                      ..|++++++|+|.|++||...
T Consensus        10 h~C~~~~~~~~C~C~~Gy~L~   30 (51)
T d1kigl_          10 QFCREERSEVRCSCAHGYVLG   30 (51)
T ss_dssp             SCCCEETTEECCCCCTTEEEC
T ss_pred             cEeEcCCCcEEeEcCCCCEEC
Confidence            478999999999999999864

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.58  E-value=0.022  Score=29.41  Aligned_cols=34  Identities=21%  Similarity=0.490  Sum_probs=27.6

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         12 NDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        12 ~d~~~C~~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      +.+|+|...+|.  .+|.....+.|.|. |..||...
T Consensus         2 e~vDPCf~~~CE--~qCqP~~~~~Y~Ci-CaeGFaP~   35 (43)
T d1dx5i1           2 EPVDPCFRANCE--YQCQPLDQTSYLCV-CAEGFAPI   35 (43)
T ss_dssp             CCCCGGGGCCCS--SEEEECSSSCEEEE-CCTTEEEE
T ss_pred             cccccccCCCcc--eeeeeCCCCcceEE-eccccccC
Confidence            357899988884  79998876559999 99999753

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.46  E-value=0.017  Score=31.06  Aligned_cols=28  Identities=14%  Similarity=0.252  Sum_probs=21.1

Q ss_pred             CCCCCCCCeeeec-CCCeeecCCCCCCCcCC
Q psy13147         19 PNPCDPYSSCSVY-SEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        19 ~~~C~~~~~C~~~-~~~~~~C~~C~~G~~g~   48 (180)
                      .+.|.+ |.|... ....+.|. |++||+|.
T Consensus        11 ~~yC~n-G~C~~~~~~~~~~C~-C~~gY~G~   39 (46)
T d1k36a_          11 NGYCLH-GQCIYLVDMSQNYCR-CEVGYTGV   39 (46)
T ss_dssp             CSSCSS-EEEEEETTTTEEEEE-ECTTCSST
T ss_pred             CCcCcC-CEEEEeCCCCccEeE-CCCCceec
Confidence            578986 778643 33448999 99999995

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.40  E-value=0.039  Score=30.21  Aligned_cols=27  Identities=15%  Similarity=0.230  Sum_probs=21.3

Q ss_pred             CCeeeecCCCeeecCCCCCCCcCCC--CCCC
Q psy13147         25 YSSCSVYSEHVAMCDPCSGPQAPWL--PHCR   53 (180)
Q Consensus        25 ~~~C~~~~~~~~~C~~C~~G~~g~~--~~C~   53 (180)
                      ...|++++++ |+|. |++||++..  .+|+
T Consensus         9 ~h~C~~~~~~-~~C~-C~~Gy~L~~D~~tC~   37 (51)
T d1kigl_           9 DQFCREERSE-VRCS-CAHGYVLGDDSKSCV   37 (51)
T ss_dssp             SSCCCEETTE-ECCC-CCTTEEECTTSSCEE
T ss_pred             ccEeEcCCCc-EEeE-cCCCCEECCCCCccc
Confidence            4678999888 9999 999998653  4553

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.16  E-value=0.053  Score=27.30  Aligned_cols=29  Identities=28%  Similarity=0.646  Sum_probs=23.3

Q ss_pred             CCCCCCeEeec---CCCceeeCCCCCccCCCCCcc
Q psy13147         80 TCGVNALCTVV---HHTPACYCPQGTIGNPYEHCA  111 (180)
Q Consensus        80 ~C~~~~~C~~~---~g~~~C~C~~g~~g~~~~~C~  111 (180)
                      .|.++++|+.-   .+..+|.|+.+|.|.   +|+
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~---HCE   34 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ---HCE   34 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEEST---TSC
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCce---eEE
Confidence            36678888764   367899999999998   886

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.033  Score=30.43  Aligned_cols=31  Identities=32%  Similarity=0.667  Sum_probs=24.1

Q ss_pred             cCCCCCCeEee-cCCCceeeCCCCCccCCCCCccC
Q psy13147         79 GTCGVNALCTV-VHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        79 ~~C~~~~~C~~-~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      +.|.+++.|.. ..+.++|.|+.||+|.   .|+-
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~G~---rCe~   45 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYIGA---RCER   45 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETT---TTCE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCeeC---CCcc
Confidence            35777777754 4477999999999999   7864

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.05  E-value=0.043  Score=30.04  Aligned_cols=28  Identities=18%  Similarity=0.479  Sum_probs=22.9

Q ss_pred             CeEeecCCCceeeCCCCCccCC-CCCccC
Q psy13147         85 ALCTVVHHTPACYCPQGTIGNP-YEHCAT  112 (180)
Q Consensus        85 ~~C~~~~g~~~C~C~~g~~g~~-~~~C~~  112 (180)
                      ..|++++++|+|.|+.||.... ...|+.
T Consensus        12 h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~   40 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYTLADNGKACIP   40 (51)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             cEeecCCCCeEeEcCCCCEECCCCCcccc
Confidence            5899999999999999998754 236765

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.95  E-value=0.018  Score=31.44  Aligned_cols=29  Identities=14%  Similarity=0.119  Sum_probs=23.0

Q ss_pred             CCCCCCCCeeeecCCCeeecCCCCCCCcCC
Q psy13147         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      .+-|.+++.|.......+.|. |++||+|.
T Consensus        12 ~~yClnGgcc~~~~~~~~~C~-C~~gy~G~   40 (49)
T d1moxc_          12 TQFCFHGTCRFLVQEDKPACV-CHSGYVGA   40 (49)
T ss_dssp             SCSSTTEEEEEETTTTEEEEE-ECTTEEST
T ss_pred             CCEeeCCeEEecCCCCCcEeE-CCCCCEec
Confidence            467998787766655558999 99999985

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.52  E-value=0.053  Score=29.01  Aligned_cols=30  Identities=27%  Similarity=0.562  Sum_probs=23.0

Q ss_pred             cCCCCCCeEee--cCCCceeeCCCCCccCCCCCccC
Q psy13147         79 GTCGVNALCTV--VHHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        79 ~~C~~~~~C~~--~~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      +.|.+ +.|..  ....++|.|++||+|+   .|+-
T Consensus        12 ~yC~n-G~C~~~~~~~~~~C~C~~gY~G~---RCe~   43 (46)
T d1k36a_          12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGV---RCEH   43 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSST---TSCC
T ss_pred             CcCcC-CEEEEeCCCCccEeECCCCceec---Ccee
Confidence            46765 77864  3467999999999999   7864

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.27  E-value=0.035  Score=30.18  Aligned_cols=31  Identities=29%  Similarity=0.637  Sum_probs=23.3

Q ss_pred             cCCCCCCeEeec-CCCceeeCCCCCccCCCCCccC
Q psy13147         79 GTCGVNALCTVV-HHTPACYCPQGTIGNPYEHCAT  112 (180)
Q Consensus        79 ~~C~~~~~C~~~-~g~~~C~C~~g~~g~~~~~C~~  112 (180)
                      +.|.+++.|... ...++|.|++||+|.   .|+.
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G~---RCe~   44 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVGA---RCEH   44 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEEST---TSCE
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEec---CCcc
Confidence            357766666433 467999999999999   7864

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.83  E-value=0.085  Score=28.66  Aligned_cols=31  Identities=16%  Similarity=0.230  Sum_probs=21.3

Q ss_pred             CCCCC--CCCCCCCeee------ecCCceeeecCCCCccCC
Q psy13147        121 NPCDH--VYCGSNAVCK------HTNGIVTCECLPTYYGNG  153 (180)
Q Consensus       121 d~C~~--~~C~~~~~C~------~~~g~~~C~C~~G~~g~~  153 (180)
                      +||..  .-|.  ..|+      ++.++|+|.|+.||+...
T Consensus         5 neC~~~NGGC~--h~Cl~~p~~~n~~~~y~C~C~~G~~L~~   43 (50)
T d1ijqa2           5 ERTTLSNGGCQ--YLCLPAPQINPHSPKFTCACPDGMLLAR   43 (50)
T ss_dssp             SSSSSGGGGCS--SEEEECCCCSTTCCSEEEECCTTCEECT
T ss_pred             cccCCCCCCCc--CccCCCcCcccCCCCEEEeCCCCCEECC
Confidence            55543  3354  4786      456899999999998653

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.073  Score=28.94  Aligned_cols=23  Identities=17%  Similarity=0.153  Sum_probs=17.4

Q ss_pred             CCeeeec------CCCeeecCCCCCCCcCCC
Q psy13147         25 YSSCSVY------SEHVAMCDPCSGPQAPWL   49 (180)
Q Consensus        25 ~~~C~~~------~~~~~~C~~C~~G~~g~~   49 (180)
                      ...|+.+      .++ |+|+ |+.||++..
T Consensus        15 ~h~Cl~~p~~~n~~~~-y~C~-C~~G~~L~~   43 (50)
T d1ijqa2          15 QYLCLPAPQINPHSPK-FTCA-CPDGMLLAR   43 (50)
T ss_dssp             SSEEEECCCCSTTCCS-EEEE-CCTTCEECT
T ss_pred             cCccCCCcCcccCCCC-EEEe-CCCCCEECC
Confidence            4688744      356 9999 999998753

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.24  E-value=0.26  Score=25.26  Aligned_cols=31  Identities=19%  Similarity=0.475  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCCCCeeeec-CCceeeecCCCCccC
Q psy13147        120 PNPCDHVYCGSNAVCKHT-NGIVTCECLPTYYGN  152 (180)
Q Consensus       120 ~d~C~~~~C~~~~~C~~~-~g~~~C~C~~G~~g~  152 (180)
                      +|+|-...|.  .+|... .++|+|.|..||...
T Consensus         4 vDPCf~~~CE--~qCqP~~~~~Y~CiCaeGFaP~   35 (43)
T d1dx5i1           4 VDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPI   35 (43)
T ss_dssp             CCGGGGCCCS--SEEEECSSSCEEEECCTTEEEE
T ss_pred             cccccCCCcc--eeeeeCCCCcceEEeccccccC
Confidence            4778667775  478854 679999999999754

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.05  E-value=0.11  Score=26.98  Aligned_cols=28  Identities=32%  Similarity=0.808  Sum_probs=21.2

Q ss_pred             CCCCCCeEeec--CCCceeeCCCCCccCCCCCcc
Q psy13147         80 TCGVNALCTVV--HHTPACYCPQGTIGNPYEHCA  111 (180)
Q Consensus        80 ~C~~~~~C~~~--~g~~~C~C~~g~~g~~~~~C~  111 (180)
                      -|. +++|...  ...+.|.|..||+|.   .|+
T Consensus         9 yCi-hG~C~~i~~l~~~~C~C~~gY~G~---RCq   38 (41)
T d1xdtr_           9 FCI-HGECKYVKELRAPSCICHPGYHGE---RCH   38 (41)
T ss_dssp             CCS-SEEECCBGGGTBCCEEECTTEEST---TCC
T ss_pred             EeE-CcEEeecCcCCCceeECCCCCeec---Ccc
Confidence            354 3788654  367899999999998   675

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.09  E-value=0.21  Score=27.79  Aligned_cols=28  Identities=14%  Similarity=0.357  Sum_probs=20.8

Q ss_pred             CCeeeecCCCeeecCCCCCCCcCCC--CCCC
Q psy13147         25 YSSCSVYSEHVAMCDPCSGPQAPWL--PHCR   53 (180)
Q Consensus        25 ~~~C~~~~~~~~~C~~C~~G~~g~~--~~C~   53 (180)
                      ...|+++++..|+|+ |++||....  .+|+
T Consensus        11 ~h~C~~~~~~~~~C~-C~~Gy~L~~D~~tC~   40 (57)
T d1rfnb_          11 EQFCKNSADNKVVCS-CTEGYRLAENQKSCE   40 (57)
T ss_dssp             SSEEEECTTSCEEEE-CCTTEEECTTSSSEE
T ss_pred             ccEeeeCCCCCeEeE-CCCCCEECCCCCccc
Confidence            468999876339999 999998753  4453

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.07  E-value=0.25  Score=27.05  Aligned_cols=23  Identities=17%  Similarity=0.254  Sum_probs=18.9

Q ss_pred             CCeeeecCCCeeecCCCCCCCcCC
Q psy13147         25 YSSCSVYSEHVAMCDPCSGPQAPW   48 (180)
Q Consensus        25 ~~~C~~~~~~~~~C~~C~~G~~g~   48 (180)
                      ...|++++++.|+|+ |+.||+..
T Consensus        10 ~h~C~~~~~~~~~C~-C~~Gy~L~   32 (53)
T d2bz6l1          10 EQYCSDHTGTKRSCR-CHEGYSLL   32 (53)
T ss_dssp             SSEEEEETTTEEEEE-CCTTEEEC
T ss_pred             cCEeeeCCCCCEEeE-CCCCCEEC
Confidence            468999887548999 99999874

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.42  E-value=0.52  Score=26.09  Aligned_cols=21  Identities=29%  Similarity=0.640  Sum_probs=17.6

Q ss_pred             CeeeecC-CceeeecCCCCccC
Q psy13147        132 AVCKHTN-GIVTCECLPTYYGN  152 (180)
Q Consensus       132 ~~C~~~~-g~~~C~C~~G~~g~  152 (180)
                      ..|++++ ++|+|.|+.||...
T Consensus        12 h~C~~~~~~~~~C~C~~Gy~L~   33 (57)
T d1rfnb_          12 QFCKNSADNKVVCSCTEGYRLA   33 (57)
T ss_dssp             SEEEECTTSCEEEECCTTEEEC
T ss_pred             cEeeeCCCCCeEeECCCCCEEC
Confidence            4898886 48999999999864