Psyllid ID: psy13158
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 289 | ||||||
| 270013391 | 21117 | hypothetical protein TcasGA2_TC011986 [T | 0.757 | 0.010 | 0.556 | 4e-62 | |
| 158299050 | 2257 | AGAP010023-PA [Anopheles gambiae str. PE | 0.712 | 0.091 | 0.543 | 1e-61 | |
| 195052558 | 7303 | GH13743 [Drosophila grimshawi] gi|193900 | 0.788 | 0.031 | 0.492 | 1e-61 | |
| 328714521 | 16577 | PREDICTED: hypothetical protein LOC10016 | 0.723 | 0.012 | 0.543 | 2e-61 | |
| 158299052 | 3202 | AGAP010024-PA [Anopheles gambiae str. PE | 0.698 | 0.063 | 0.544 | 2e-61 | |
| 442625920 | 18014 | dumpy, isoform W [Drosophila melanogaste | 0.705 | 0.011 | 0.527 | 4e-61 | |
| 442625928 | 19560 | dumpy, isoform AA [Drosophila melanogast | 0.705 | 0.010 | 0.527 | 7e-61 | |
| 442625918 | 20404 | dumpy, isoform V [Drosophila melanogaste | 0.705 | 0.009 | 0.527 | 1e-60 | |
| 442625916 | 21657 | dumpy, isoform U [Drosophila melanogaste | 0.705 | 0.009 | 0.527 | 1e-60 | |
| 442625914 | 22300 | dumpy, isoform T [Drosophila melanogaste | 0.705 | 0.009 | 0.527 | 1e-60 |
| >gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/264 (55%), Positives = 168/264 (63%), Gaps = 45/264 (17%)
Query: 6 VHVDLATLECYPSPCGPYSECRNINGGPSCSCRPGYIGSPPNCRPECVMNSECPSHEACI 65
V + T C PSPCGP S+CR +NG CSC P YIGSPP CRPECV++SEC
Sbjct: 15164 VKDETPTNPCQPSPCGPNSQCREVNGQAVCSCLPNYIGSPPGCRPECVVSSECAQ----- 15218
Query: 66 KIPECIQNSECPYDKACIREKCVDPCPGSCGYGAVCTVINHSNEKCQDPCPGSCGYNAEC 125
+KAC+ +KCVDP CPG+CG NA C
Sbjct: 15219 -------------NKACVNQKCVDP------------------------CPGTCGLNANC 15241
Query: 126 KVINHNPICSCSQGYIGDGFSGCYPKPPEVPPPPQQDVQEYVNPCVPSPCGLYSQCRDIG 185
+VINH+PICSC G+ GD FS C+P PP P + V+ NPCVPSPCG S+CRDIG
Sbjct: 15242 QVINHSPICSCQAGFTGDPFSRCFPIPPPPPVQEPEPVR---NPCVPSPCGPNSECRDIG 15298
Query: 186 GSPSCSCLPNYIGAPPNCRPECLQNSECPNDKACIREKCADPCPGSCGYNAQCKVINHTP 245
GSPSCSCLPNYIG+PPNCRPEC NSEC ++ ACIREKC DPCPGSCG AQC VINHTP
Sbjct: 15299 GSPSCSCLPNYIGSPPNCRPECTINSECSSNLACIREKCRDPCPGSCGSGAQCSVINHTP 15358
Query: 246 TCTCPDGFIGDAFLSCHPKPPERE 269
CTCP+G+ GD F C PKP E E
Sbjct: 15359 ICTCPEGYTGDPFSYCQPKPQEVE 15382
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158299050|ref|XP_001689174.1| AGAP010023-PA [Anopheles gambiae str. PEST] gi|157014182|gb|EDO63447.1| AGAP010023-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|195052558|ref|XP_001993322.1| GH13743 [Drosophila grimshawi] gi|193900381|gb|EDV99247.1| GH13743 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
| >gi|328714521|ref|XP_003245382.1| PREDICTED: hypothetical protein LOC100166039 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|158299052|ref|XP_319172.4| AGAP010024-PA [Anopheles gambiae str. PEST] gi|157014183|gb|EAA13876.4| AGAP010024-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|442625920|ref|NP_001260038.1| dumpy, isoform W [Drosophila melanogaster] gi|440213323|gb|AGB92574.1| dumpy, isoform W [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|442625928|ref|NP_001260042.1| dumpy, isoform AA [Drosophila melanogaster] gi|440213327|gb|AGB92578.1| dumpy, isoform AA [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|442625918|ref|NP_001260037.1| dumpy, isoform V [Drosophila melanogaster] gi|440213322|gb|AGB92573.1| dumpy, isoform V [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|442625916|ref|NP_001260036.1| dumpy, isoform U [Drosophila melanogaster] gi|440213321|gb|AGB92572.1| dumpy, isoform U [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|442625914|ref|NP_001260035.1| dumpy, isoform T [Drosophila melanogaster] gi|440213320|gb|AGB92571.1| dumpy, isoform T [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 289 | ||||||
| FB|FBgn0053196 | 22 | dp "dumpy" [Drosophila melanog | 0.837 | 11.0 | 0.494 | 9.2e-62 | |
| UNIPROTKB|E1BNX3 | 1148 | Bt.112199 "Uncharacterized pro | 0.761 | 0.191 | 0.295 | 4.4e-17 | |
| UNIPROTKB|J9NS51 | 2272 | NOTCH1 "Uncharacterized protei | 0.802 | 0.102 | 0.292 | 2.7e-16 | |
| UNIPROTKB|F1PDC7 | 2555 | NOTCH1 "Uncharacterized protei | 0.802 | 0.090 | 0.292 | 3.1e-16 | |
| UNIPROTKB|F1PJ40 | 1162 | EMR1 "Uncharacterized protein" | 0.737 | 0.183 | 0.302 | 3.2e-16 | |
| ZFIN|ZDB-GENE-041001-184 | 8328 | si:dkey-30j22.1 "si:dkey-30j22 | 0.719 | 0.024 | 0.311 | 3.3e-16 | |
| MGI|MGI:97363 | 2531 | Notch1 "notch 1" [Mus musculus | 0.802 | 0.091 | 0.292 | 6.4e-16 | |
| RGD|3187 | 2531 | Notch1 "notch 1" [Rattus norve | 0.802 | 0.091 | 0.288 | 8.2e-16 | |
| UNIPROTKB|Q07008 | 2531 | Notch1 "Neurogenic locus notch | 0.802 | 0.091 | 0.288 | 8.2e-16 | |
| UNIPROTKB|F1MSM3 | 2534 | NOTCH1 "Uncharacterized protei | 0.802 | 0.091 | 0.288 | 1e-15 |
| FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 658 (236.7 bits), Expect = 9.2e-62, P = 9.2e-62
Identities = 128/259 (49%), Positives = 152/259 (58%)
Query: 17 PSPCGPYSECRNINGGPSCSCRPGYIGSP-PNCRPECVMNSECPSHEACIKIPECIQNSE 75
P CG + C +N PSCSC GY G P +C PE V P C P C NS+
Sbjct: 14766 PGTCGQNALCNVLNHIPSCSCISGYSGDPYRSCVPEPVKEYVNP----CQPSP-CGPNSQ 14820
Query: 76 CPY--DKA---CIREKCVDP--CPGSCGYGAVCTVINHS-NEKCQDPCPGSCGYNAECKV 127
C ++A C+ E P C C + C N+KC DPCP +CG A C+V
Sbjct: 14821 CREVNEQAICSCLPEYVGAPPVCRPECTISSECPADKACVNQKCVDPCPNTCGDQAICRV 14880
Query: 128 INHNPICSCSQGYIGDGFSGCYXXXXXXXXXXQQDVQEYVNPCVPSPCGLYSQCRDIGGS 187
+NH+PICSC GY GD F C+ Q+ V+PCVP+PCG YSQCR G +
Sbjct: 14881 VNHSPICSCRAGYTGDAFFRCFPKPPVPPTPVQKTP---VDPCVPTPCGPYSQCRSQGDA 14937
Query: 188 PSCSCLPNYIGAPPNCRPECLQNSECPNDKACIREKCADPCPGSCGYNAQCKVINHTPTC 247
P+CSCL YIGAPPNCRPEC N+ECP+ +ACI EKC DPCPGSCGY A C VINHTP+C
Sbjct: 14938 PACSCLVGYIGAPPNCRPECRINAECPSSQACINEKCRDPCPGSCGYGAICNVINHTPSC 14997
Query: 248 TCPDGFIGDAFLSCHPKPP 266
TCP G+ GD F C P PP
Sbjct: 14998 TCPPGYSGDPFSQCQPVPP 15016
|
|
| UNIPROTKB|E1BNX3 Bt.112199 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NS51 NOTCH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PDC7 NOTCH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PJ40 EMR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-041001-184 si:dkey-30j22.1 "si:dkey-30j22.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:97363 Notch1 "notch 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|3187 Notch1 "notch 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q07008 Notch1 "Neurogenic locus notch homolog protein 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MSM3 NOTCH1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
No hit with e-value below 0.005
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 289 | |||
| KOG1214|consensus | 1289 | 99.6 | ||
| KOG1219|consensus | 4289 | 99.4 | ||
| KOG1214|consensus | 1289 | 99.33 | ||
| KOG1219|consensus | 4289 | 99.18 | ||
| KOG4289|consensus | 2531 | 99.06 | ||
| KOG1217|consensus | 487 | 98.96 | ||
| KOG4289|consensus | 2531 | 98.71 | ||
| KOG1217|consensus | 487 | 98.68 | ||
| PF07645 | 42 | EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 | 98.46 | |
| KOG4260|consensus | 350 | 98.43 | ||
| PF07645 | 42 | EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 | 98.2 | |
| smart00179 | 39 | EGF_CA Calcium-binding EGF-like domain. | 98.14 | |
| KOG1225|consensus | 525 | 98.13 | ||
| KOG4260|consensus | 350 | 98.1 | ||
| PF12947 | 36 | EGF_3: EGF domain; InterPro: IPR024731 This entry | 97.93 | |
| PF12947 | 36 | EGF_3: EGF domain; InterPro: IPR024731 This entry | 97.92 | |
| PF00008 | 32 | EGF: EGF-like domain This is a sub-family of the P | 97.91 | |
| cd00054 | 38 | EGF_CA Calcium-binding EGF-like domain, present in | 97.79 | |
| KOG1225|consensus | 525 | 97.76 | ||
| PF00008 | 32 | EGF: EGF-like domain This is a sub-family of the P | 97.55 | |
| smart00179 | 39 | EGF_CA Calcium-binding EGF-like domain. | 97.48 | |
| PF12662 | 24 | cEGF: Complement Clr-like EGF-like | 97.25 | |
| smart00181 | 35 | EGF Epidermal growth factor-like domain. | 97.13 | |
| PF06247 | 197 | Plasmod_Pvs28: Plasmodium ookinete surface protein | 97.12 | |
| PF12662 | 24 | cEGF: Complement Clr-like EGF-like | 97.02 | |
| cd00053 | 36 | EGF Epidermal growth factor domain, found in epide | 97.02 | |
| cd00054 | 38 | EGF_CA Calcium-binding EGF-like domain, present in | 96.95 | |
| cd00053 | 36 | EGF Epidermal growth factor domain, found in epide | 96.57 | |
| smart00181 | 35 | EGF Epidermal growth factor-like domain. | 96.31 | |
| PF14670 | 36 | FXa_inhibition: Coagulation Factor Xa inhibitory s | 95.76 | |
| KOG1226|consensus | 783 | 95.52 | ||
| PF14670 | 36 | FXa_inhibition: Coagulation Factor Xa inhibitory s | 95.28 | |
| PF07974 | 32 | EGF_2: EGF-like domain; InterPro: IPR013111 A sequ | 95.15 | |
| PF12661 | 13 | hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E | 94.14 | |
| PF06247 | 197 | Plasmod_Pvs28: Plasmodium ookinete surface protein | 93.61 | |
| PF07974 | 32 | EGF_2: EGF-like domain; InterPro: IPR013111 A sequ | 93.12 | |
| KOG0994|consensus | 1758 | 92.84 | ||
| KOG0994|consensus | 1758 | 92.82 | ||
| PF12946 | 37 | EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 | 92.69 | |
| KOG1226|consensus | 783 | 92.6 | ||
| cd01475 | 224 | vWA_Matrilin VWA_Matrilin: In cartilaginous plate, | 91.39 | |
| PF12946 | 37 | EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 | 90.34 | |
| PF01683 | 52 | EB: EB module; InterPro: IPR006149 The EB domain h | 86.32 | |
| smart00051 | 63 | DSL delta serrate ligand. | 83.79 | |
| cd01475 | 224 | vWA_Matrilin VWA_Matrilin: In cartilaginous plate, | 81.92 |
| >KOG1214|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=6e-15 Score=138.18 Aligned_cols=166 Identities=30% Similarity=0.716 Sum_probs=120.3
Q ss_pred CcCCCC--CCCCCCCCeeeeCCC-CceeeCCCCccCCCCCCcccCCCCCCCCCCCccccCCCcccCCCCCCCCccccccc
Q psy13158 11 ATLECY--PSPCGPYSECRNING-GPSCSCRPGYIGSPPNCRPECVMNSECPSHEACIKIPECIQNSECPYDKACIREKC 87 (289)
Q Consensus 11 did~C~--~~~C~~~~~C~n~~g-s~~C~C~~Gf~g~~~~C~~~C~~~~~c~~~~~C~~~~~C~~~~~c~~~~~c~~~~c 87 (289)
.++.|. ++-|..++.|...++ .|.|.|..||.|.|.+ |.+.++|...
T Consensus 691 ~~npCy~gsh~cdt~a~C~pg~~~~~tcecs~g~~gdgr~----------------c~d~~eca~~-------------- 740 (1289)
T KOG1214|consen 691 PVNPCYDGSHMCDTTARCHPGTGVDYTCECSSGYQGDGRN----------------CVDENECATG-------------- 740 (1289)
T ss_pred ccccceecCcccCCCccccCCCCcceEEEEeeccCCCCCC----------------CCChhhhccC--------------
Confidence 456666 566777788887764 6888888888887333 4444443322
Q ss_pred cCCCCCCCCCCCeeeeccCCCCcccCCCCCCCCCCCeeeecCCCceeecCCCCccCCC-CCCCCCCCCCCCCCCCCCccc
Q psy13158 88 VDPCPGSCGYGAVCTVINHSNEKCQDPCPGSCGYNAECKVINHNPICSCSQGYIGDGF-SGCYPKPPEVPPPPQQDVQEY 166 (289)
Q Consensus 88 ~~~C~g~~~~~~~C~~~~~~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~~~~~-~~C~~~~~~~~~~~~~~~~~~ 166 (289)
...|..+++|++..++|+|.|..||..... ..|.++..+ ..
T Consensus 741 ----------------------------~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~p----------ap 782 (1289)
T KOG1214|consen 741 ----------------------------FHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPP----------AP 782 (1289)
T ss_pred ----------------------------CCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCC----------CC
Confidence 356888999999999999999999875432 236444332 22
Q ss_pred cCCCC--CCCCCCCC--eeeecC-CCCeeeCCCCcccCCCCCccCCCCCCCCCCCCccccCcccCCCCCCCCCCCeeeeC
Q psy13158 167 VNPCV--PSPCGLYS--QCRDIG-GSPSCSCLPNYIGAPPNCRPECLQNSECPNDKACIREKCADPCPGSCGYNAQCKVI 241 (289)
Q Consensus 167 ~~~C~--~~~C~~~~--~C~~~~-g~~~C~C~~G~~g~~~~c~~~C~~~~~C~~~~~c~~~~c~~~c~~~C~~~~~C~~~ 241 (289)
++.|. .+.|...+ .|+... ++|.|.|.|||.|++.. |.++|+|..+ .|++.++|+|+
T Consensus 783 ~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~----c~dvDeC~ps--------------rChp~A~Cynt 844 (1289)
T KOG1214|consen 783 ANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQ----CTDVDECSPS--------------RCHPAATCYNT 844 (1289)
T ss_pred CCccccCccccCcCCceEEEecCCceEEEeecCCccCCccc----cccccccCcc--------------ccCCCceEecC
Confidence 34454 23455444 455554 45999999999999764 4678999865 79999999999
Q ss_pred CCCceeeCCCCCccCCCCCCCC
Q psy13158 242 NHTPTCTCPDGFIGDAFLSCHP 263 (289)
Q Consensus 242 ~g~~~C~C~~G~~g~~~~~C~~ 263 (289)
.|+|.|.|.+||.|++.+ |.+
T Consensus 845 pgsfsC~C~pGy~GDGf~-CVP 865 (1289)
T KOG1214|consen 845 PGSFSCRCQPGYYGDGFQ-CVP 865 (1289)
T ss_pred CCcceeecccCccCCCce-ecC
Confidence 999999999999999986 875
|
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| >KOG1219|consensus | Back alignment and domain information |
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| >KOG1214|consensus | Back alignment and domain information |
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| >KOG1219|consensus | Back alignment and domain information |
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| >KOG4289|consensus | Back alignment and domain information |
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| >KOG1217|consensus | Back alignment and domain information |
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| >KOG4289|consensus | Back alignment and domain information |
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| >KOG1217|consensus | Back alignment and domain information |
|---|
| >PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins | Back alignment and domain information |
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| >KOG4260|consensus | Back alignment and domain information |
|---|
| >PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins | Back alignment and domain information |
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| >smart00179 EGF_CA Calcium-binding EGF-like domain | Back alignment and domain information |
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| >KOG1225|consensus | Back alignment and domain information |
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| >KOG4260|consensus | Back alignment and domain information |
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| >PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins | Back alignment and domain information |
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| >PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins | Back alignment and domain information |
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| >PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
|---|
| >cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins | Back alignment and domain information |
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| >KOG1225|consensus | Back alignment and domain information |
|---|
| >PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
|---|
| >smart00179 EGF_CA Calcium-binding EGF-like domain | Back alignment and domain information |
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| >PF12662 cEGF: Complement Clr-like EGF-like | Back alignment and domain information |
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| >smart00181 EGF Epidermal growth factor-like domain | Back alignment and domain information |
|---|
| >PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium | Back alignment and domain information |
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| >PF12662 cEGF: Complement Clr-like EGF-like | Back alignment and domain information |
|---|
| >cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium | Back alignment and domain information |
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| >cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins | Back alignment and domain information |
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| >cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium | Back alignment and domain information |
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| >smart00181 EGF Epidermal growth factor-like domain | Back alignment and domain information |
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| >PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A | Back alignment and domain information |
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| >KOG1226|consensus | Back alignment and domain information |
|---|
| >PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A | Back alignment and domain information |
|---|
| >PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
|---|
| >PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A | Back alignment and domain information |
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| >PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium | Back alignment and domain information |
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| >PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
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| >KOG0994|consensus | Back alignment and domain information |
|---|
| >KOG0994|consensus | Back alignment and domain information |
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| >PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein | Back alignment and domain information |
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| >KOG1226|consensus | Back alignment and domain information |
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| >cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity | Back alignment and domain information |
|---|
| >PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein | Back alignment and domain information |
|---|
| >PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function | Back alignment and domain information |
|---|
| >smart00051 DSL delta serrate ligand | Back alignment and domain information |
|---|
| >cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 289 | |||
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 1e-04 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 3e-04 |
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 1e-04
Identities = 42/241 (17%), Positives = 58/241 (24%), Gaps = 31/241 (12%)
Query: 36 SCRPGYIGSPPNCRPECVMNSECPSHEACIKIPECIQNSECPYDKAC-IREKCVDPCPGS 94
S +I + EC CP K + + C C CP
Sbjct: 139 SVEDNHIVLNKDDNEECG--DICPGTAKG-KTNCPATVINGQFVERCWTHSHCQKVCPTI 195
Query: 95 CGYGAVCTVINHSNEKCQDPCPGSCGYNAECKVINHNPICSCSQGYIGDGFSGCYPKPPE 154
C C C G+C + C + + DG C
Sbjct: 196 CKSHG----CTAEGLCCHSECLGNCSQPDDPT------KCVACRNFYLDG--RCVE---T 240
Query: 155 VPPPPQQDVQEYVNPCVPSPCGLYSQCRDIGGSPSCSCLPNYIGAPPNCRPECLQNSECP 214
PPP S C + Y+ C PEC
Sbjct: 241 CPPPYYHFQDWRCVNF--SFC---QDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMN 295
Query: 215 NDKACIREKCADPCPGSCGYNAQCKVINHTPT------CTCPDGFIGDAFLSCHPKPPER 268
+ C PCP C K I+ + CT +G + + E
Sbjct: 296 SSNLLC-TPCLGPCPKVCHLLEGEKTIDSVTSAQELRGCTVINGSLIINIRGGNNLAAEL 354
Query: 269 E 269
E
Sbjct: 355 E 355
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 289 | |||
| 1z1y_A | 186 | Ookinete surface protein PVS25; four EGF-like doma | 99.8 | |
| 2vj3_A | 135 | Neurogenic locus notch homolog protein 1; transcri | 99.8 | |
| 2vj3_A | 135 | Neurogenic locus notch homolog protein 1; transcri | 99.8 | |
| 1yo8_A | 634 | Thrombospondin-2; EGF, Ca(2+)-binding domains, lec | 99.7 | |
| 1uzk_A | 162 | Fibrillin-1; glycoprotein, extra-cellular matrix, | 99.69 | |
| 4d90_A | 143 | EGF-like repeat and discoidin I-like domain-conta | 99.68 | |
| 4d90_A | 143 | EGF-like repeat and discoidin I-like domain-conta | 99.67 | |
| 2bou_A | 143 | EGF-like module containing mucin-like hormone rece | 99.67 | |
| 1yo8_A | 634 | Thrombospondin-2; EGF, Ca(2+)-binding domains, lec | 99.66 | |
| 4fbr_A | 267 | Lectin, myxobacterial hemagglutinin; beta-barrel, | 99.64 | |
| 2bou_A | 143 | EGF-like module containing mucin-like hormone rece | 99.57 | |
| 1z1y_A | 186 | Ookinete surface protein PVS25; four EGF-like doma | 99.52 | |
| 2vj2_A | 169 | Jagged-1; signalling, polymorphism, glycoprotein, | 99.5 | |
| 2ygq_A | 324 | WIF-1, WNT inhibitory factor 1; signaling protein, | 99.49 | |
| 1dx5_I | 118 | Thrombomodulin; serine proteinase, EGF-like domain | 99.45 | |
| 2w86_A | 147 | Fibrillin-1, fibrillin1; phosphoprotein, EGF-like | 99.43 | |
| 1dx5_I | 118 | Thrombomodulin; serine proteinase, EGF-like domain | 99.37 | |
| 1emn_A | 82 | Fibrillin; extracellular matrix, calcium-binding, | 99.29 | |
| 2w86_A | 147 | Fibrillin-1, fibrillin1; phosphoprotein, EGF-like | 99.23 | |
| 1emn_A | 82 | Fibrillin; extracellular matrix, calcium-binding, | 99.22 | |
| 1tpg_A | 91 | T-plasminogen activator F1-G; plasminogen activati | 99.22 | |
| 1lmj_A | 86 | Fibrillin 1; EGF, calcium, microfibril, neonatal, | 99.21 | |
| 3fcs_B | 690 | Integrin beta-3; beta propeller, rossmann fold, EG | 99.17 | |
| 1lmj_A | 86 | Fibrillin 1; EGF, calcium, microfibril, neonatal, | 99.17 | |
| 4fbr_A | 267 | Lectin, myxobacterial hemagglutinin; beta-barrel, | 99.16 | |
| 1x7a_L | 146 | Coagulation factor IX, light chain; inhibition, bl | 99.14 | |
| 1aut_L | 114 | Activated protein C; serine proteinase, plasma cal | 99.07 | |
| 1z6c_A | 87 | Vitamin K-dependent protein S; EGF module, blood c | 99.06 | |
| 2vj2_A | 169 | Jagged-1; signalling, polymorphism, glycoprotein, | 99.04 | |
| 1aut_L | 114 | Activated protein C; serine proteinase, plasma cal | 99.03 | |
| 1tpg_A | 91 | T-plasminogen activator F1-G; plasminogen activati | 99.01 | |
| 1x7a_L | 146 | Coagulation factor IX, light chain; inhibition, bl | 99.01 | |
| 1z6c_A | 87 | Vitamin K-dependent protein S; EGF module, blood c | 99.0 | |
| 2ygq_A | 324 | WIF-1, WNT inhibitory factor 1; signaling protein, | 99.0 | |
| 2c4f_L | 142 | Coagulation factor VII precursor; blood coagulatio | 98.95 | |
| 2vh0_B | 134 | Activated factor XA light chain; serine protease, | 98.9 | |
| 1nfu_B | 195 | Coagulation factor XA, light chain; hydrolase; HET | 98.89 | |
| 3h5c_B | 317 | Vitamin K-dependent protein Z; protein Z-protein Z | 98.88 | |
| 1nfu_B | 195 | Coagulation factor XA, light chain; hydrolase; HET | 98.79 | |
| 2w2n_E | 107 | LDL receptor, low-density lipoprotein receptor; hy | 98.78 | |
| 2vh0_B | 134 | Activated factor XA light chain; serine protease, | 98.76 | |
| 3u7u_G | 55 | Neuregulin 1; signaling protein, transferase-trans | 98.75 | |
| 1edm_B | 39 | Factor IX; epidermal growth factor, EGF, calcium- | 98.71 | |
| 2gy5_A | 423 | Angiopoietin-1 receptor; ligand-binding domain, tr | 98.69 | |
| 2w2n_E | 107 | LDL receptor, low-density lipoprotein receptor; hy | 98.66 | |
| 3h5c_B | 317 | Vitamin K-dependent protein Z; protein Z-protein Z | 98.66 | |
| 2c4f_L | 142 | Coagulation factor VII precursor; blood coagulatio | 98.63 | |
| 3k6s_B | 687 | Integrin beta-2; cell receptor, adhesion molecule, | 98.59 | |
| 1uzk_A | 162 | Fibrillin-1; glycoprotein, extra-cellular matrix, | 98.56 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.52 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.52 | |
| 3fcs_B | 690 | Integrin beta-3; beta propeller, rossmann fold, EG | 98.5 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.39 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.38 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.37 | |
| 2k2s_B | 61 | Micronemal protein 6; microneme protein complex, c | 98.34 | |
| 1egf_A | 53 | Epidermal growth factor; NMR {Mus musculus} SCOP: | 98.3 | |
| 3k6s_B | 687 | Integrin beta-2; cell receptor, adhesion molecule, | 98.3 | |
| 2gy5_A | 423 | Angiopoietin-1 receptor; ligand-binding domain, tr | 98.27 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.25 | |
| 1edm_B | 39 | Factor IX; epidermal growth factor, EGF, calcium- | 98.19 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.06 | |
| 1k36_A | 46 | Epiregulin; EGF-like fold, hormone/growth factor c | 98.04 | |
| 1a3p_A | 45 | Epidermal growth factor; disulfide connectivities, | 97.99 | |
| 3u7u_G | 55 | Neuregulin 1; signaling protein, transferase-trans | 97.98 | |
| 2k2s_B | 61 | Micronemal protein 6; microneme protein complex, c | 97.97 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.96 | |
| 1apq_A | 53 | Complement protease C1R; EGF, calcium binding, ser | 97.91 | |
| 2kl7_A | 71 | Fibulin-4; secreted, calcium, disease mutation, di | 97.87 | |
| 1egf_A | 53 | Epidermal growth factor; NMR {Mus musculus} SCOP: | 97.81 | |
| 4aqs_A | 525 | Laminin subunit beta-1; cell adhesion; HET: NAG BM | 97.8 | |
| 2kl7_A | 71 | Fibulin-4; secreted, calcium, disease mutation, di | 97.78 | |
| 1hae_A | 63 | Heregulin-alpha; growth factor; NMR {Homo sapiens} | 97.76 | |
| 1kli_L | 69 | Factor VIIA; extrinsic coagulation pathway, serine | 97.74 | |
| 1a3p_A | 45 | Epidermal growth factor; disulfide connectivities, | 97.74 | |
| 2jkh_L | 55 | Factor X light chain; plasma, calcium, zymogen, se | 97.71 | |
| 2jkh_L | 55 | Factor X light chain; plasma, calcium, zymogen, se | 97.69 | |
| 1gl4_A | 285 | Nidogen-1, entactin; immunoglobulin-like domain, e | 97.61 | |
| 2p28_B | 217 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 97.58 | |
| 2p28_B | 217 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 97.57 | |
| 1gl4_A | 285 | Nidogen-1, entactin; immunoglobulin-like domain, e | 97.54 | |
| 1hae_A | 63 | Heregulin-alpha; growth factor; NMR {Homo sapiens} | 97.53 | |
| 1kli_L | 69 | Factor VIIA; extrinsic coagulation pathway, serine | 97.4 | |
| 3ca7_A | 52 | Protein spitz; argos, EGF, developmental protein, | 97.33 | |
| 1k36_A | 46 | Epiregulin; EGF-like fold, hormone/growth factor c | 97.23 | |
| 1nql_B | 53 | Epidermal growth factor; cell surface receptor, ty | 97.19 | |
| 1kig_L | 51 | Factor XA; glycoprotein, serine protease, plasma, | 97.12 | |
| 1apq_A | 53 | Complement protease C1R; EGF, calcium binding, ser | 97.1 | |
| 1nql_B | 53 | Epidermal growth factor; cell surface receptor, ty | 96.96 | |
| 1kig_L | 51 | Factor XA; glycoprotein, serine protease, plasma, | 96.87 | |
| 1g1s_A | 162 | P-selectin; selectin, lectin, EGF, sulphated, SLEX | 96.84 | |
| 3ca7_A | 52 | Protein spitz; argos, EGF, developmental protein, | 96.83 | |
| 2bz6_L | 53 | Blood coagulation factor VIIA; serine protease, en | 96.82 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 96.8 | |
| 1ob1_C | 99 | Major merozoite surface protein; immune system, im | 96.62 | |
| 4aqs_A | 525 | Laminin subunit beta-1; cell adhesion; HET: NAG BM | 96.61 | |
| 1g1s_A | 162 | P-selectin; selectin, lectin, EGF, sulphated, SLEX | 96.54 | |
| 1n1i_A | 105 | Merozoite surface protein-1; MSP1, malaria, surfac | 96.53 | |
| 1klo_A | 162 | Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: | 96.47 | |
| 2bz6_L | 53 | Blood coagulation factor VIIA; serine protease, en | 96.42 | |
| 1klo_A | 162 | Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: | 96.39 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 96.38 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 96.29 | |
| 3ltf_D | 58 | Protein spitz; receptor-ligand complex ectodomain | 96.18 | |
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 96.03 | |
| 3ltf_D | 58 | Protein spitz; receptor-ligand complex ectodomain | 95.67 | |
| 3zyj_B | 426 | Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA | 95.54 | |
| 1ob1_C | 99 | Major merozoite surface protein; immune system, im | 95.51 | |
| 2wph_E | 59 | Coagulation factor IXA light chain; serine proteas | 94.99 | |
| 1n1i_A | 105 | Merozoite surface protein-1; MSP1, malaria, surfac | 94.97 | |
| 3zyj_B | 426 | Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA | 94.91 | |
| 2wph_E | 59 | Coagulation factor IXA light chain; serine proteas | 94.77 | |
| 3cfw_A | 164 | L-selectin; EGF, cell adhesion, EGF-like domain, g | 94.14 | |
| 3cfw_A | 164 | L-selectin; EGF, cell adhesion, EGF-like domain, g | 93.86 | |
| 2fd6_A | 122 | Urokinase-type plasminogen activator; UPAR, ATF, A | 93.85 | |
| 1szb_A | 170 | Mannose binding lectin-associated serine protease- | 93.74 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 93.58 | |
| 2fd6_A | 122 | Urokinase-type plasminogen activator; UPAR, ATF, A | 93.5 | |
| 3asi_A | 410 | Neurexin-1-alpha; beta-sandwich, cell adhesion, sy | 92.79 | |
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 92.35 | |
| 1xdt_R | 79 | Hbegf, heparin-binding epidermal growth factor; co | 92.14 | |
| 1iox_A | 50 | Betacellulin; EGF-like fold, hormone/growth factor | 92.04 | |
| 3f1s_B | 283 | Vitamin K-dependent protein Z; PZ, ZPI, complex, s | 91.68 | |
| 3e50_C | 50 | Protransforming growth factor alpha; IDE, TGF-alph | 91.61 | |
| 1iox_A | 50 | Betacellulin; EGF-like fold, hormone/growth factor | 91.54 | |
| 2rnl_A | 50 | Amphiregulin; AR, colorectum cell-derived growth f | 91.53 | |
| 1nzi_A | 159 | Complement C1S component; calcium, innate immunity | 91.44 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 91.36 | |
| 3e50_C | 50 | Protransforming growth factor alpha; IDE, TGF-alph | 90.08 | |
| 2i9a_A | 145 | Urokinase-type plasminogen activator; growth facto | 90.03 | |
| 2rnl_A | 50 | Amphiregulin; AR, colorectum cell-derived growth f | 89.24 | |
| 1xdt_R | 79 | Hbegf, heparin-binding epidermal growth factor; co | 89.01 | |
| 1g1t_A | 157 | E-selectin; EGF, adhesion molecule, SLEX, immune s | 88.72 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 88.31 | |
| 3qcw_A | 1245 | Neurexin-1-alpha; synaptic adhesion molecule, cell | 87.73 | |
| 2ygo_A | 188 | WIF-1, WNT inhibitory factor 1; signaling protein, | 87.18 | |
| 3f1s_B | 283 | Vitamin K-dependent protein Z; PZ, ZPI, complex, s | 86.45 | |
| 1szb_A | 170 | Mannose binding lectin-associated serine protease- | 86.4 | |
| 2i9a_A | 145 | Urokinase-type plasminogen activator; growth facto | 85.89 | |
| 3fby_A | 551 | COMP, cartilage oligomeric matrix protein; signatu | 84.93 | |
| 1g1t_A | 157 | E-selectin; EGF, adhesion molecule, SLEX, immune s | 83.11 | |
| 3qcw_A | 1245 | Neurexin-1-alpha; synaptic adhesion molecule, cell | 81.96 | |
| 1nzi_A | 159 | Complement C1S component; calcium, innate immunity | 81.65 | |
| 3fby_A | 551 | COMP, cartilage oligomeric matrix protein; signatu | 81.6 | |
| 3asi_A | 410 | Neurexin-1-alpha; beta-sandwich, cell adhesion, sy | 80.54 |
| >1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A | Back alignment and structure |
|---|
Probab=99.80 E-value=8e-21 Score=155.25 Aligned_cols=150 Identities=22% Similarity=0.470 Sum_probs=116.3
Q ss_pred CCCCCCCCCeeeeCCCCceeeCCCCccCCCCCCcccCCCCCCCCCCCccccCCCcccCCCCCCCCccccccccCCCCCCC
Q psy13158 16 YPSPCGPYSECRNINGGPSCSCRPGYIGSPPNCRPECVMNSECPSHEACIKIPECIQNSECPYDKACIREKCVDPCPGSC 95 (289)
Q Consensus 16 ~~~~C~~~~~C~n~~gs~~C~C~~Gf~g~~~~C~~~C~~~~~c~~~~~C~~~~~C~~~~~c~~~~~c~~~~c~~~C~g~~ 95 (289)
.++||. +++|+++.++|.|.|++||+|. ++..|.++++|....
T Consensus 9 ~~~pC~-ng~C~~~~g~~~C~C~~G~~g~---------------~~~~C~~id~C~~~~--------------------- 51 (186)
T 1z1y_A 9 VDTICX-NGQLVQMSNHFXCMCNEGLVHL---------------SENTCEEXNECXXET--------------------- 51 (186)
T ss_dssp TTCCCB-TEEEEECSSCEEEEECTTEEEE---------------ETTEEEECCCCSGGG---------------------
T ss_pred CCCCCC-CCEeECCCCCeEeECCCCCccC---------------CCCccCCCCcccCCC---------------------
Confidence 368898 4699999999999999999986 123565555554220
Q ss_pred CCCCeeeeccCCCCcccCCCCCCCCCCCeeeecC-----CCceeecCCCCccCCCCCCCCCCCCCCCCCCCCCccccCCC
Q psy13158 96 GYGAVCTVINHSNEKCQDPCPGSCGYNAECKVIN-----HNPICSCSQGYIGDGFSGCYPKPPEVPPPPQQDVQEYVNPC 170 (289)
Q Consensus 96 ~~~~~C~~~~~~~~~c~~~c~~~C~~~~~C~~~~-----g~~~C~C~~G~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~C 170 (289)
. +++|.++++|++.. ++|.|.|++||.+.... -.+++|
T Consensus 52 -----------------~--~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~------------------C~~d~C 94 (186)
T 1z1y_A 52 -----------------L--GXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT------------------CVLDVC 94 (186)
T ss_dssp -----------------T--TSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE------------------EEEGGG
T ss_pred -----------------C--CCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC------------------CCCCcC
Confidence 0 14577778999988 89999999999987532 237889
Q ss_pred CCCCCCCCCeee----ecCCCCeeeCCCCcccC---CCCCccCCCCC--CCCCCCCccccCcccCCCCCCC-CCCCeeee
Q psy13158 171 VPSPCGLYSQCR----DIGGSPSCSCLPNYIGA---PPNCRPECLQN--SECPNDKACIREKCADPCPGSC-GYNAQCKV 240 (289)
Q Consensus 171 ~~~~C~~~~~C~----~~~g~~~C~C~~G~~g~---~~~c~~~C~~~--~~C~~~~~c~~~~c~~~c~~~C-~~~~~C~~ 240 (289)
...+|.+++.|+ ++.++|.|.|++||+|. +.. |.++ ++|. .+| .++++|++
T Consensus 95 ~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~----C~~~~~~~C~---------------~~C~~~~~~C~n 155 (186)
T 1z1y_A 95 QYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXX----CTXTGETACQ---------------LXCNTDNEVCXN 155 (186)
T ss_dssp TTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTE----EEEEECCCCC---------------CCCCTTTEEEEE
T ss_pred cCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCc----ceEcCCCccc---------------ccccccCcceec
Confidence 888999889998 77889999999999983 233 3443 5664 268 78899999
Q ss_pred CCCCceeeCCCCCccCCC
Q psy13158 241 INHTPTCTCPDGFIGDAF 258 (289)
Q Consensus 241 ~~g~~~C~C~~G~~g~~~ 258 (289)
+.++|+|.|++||+|+..
T Consensus 156 ~~g~y~C~C~~G~~g~~~ 173 (186)
T 1z1y_A 156 VEGVYXCQCMEGFTFDXE 173 (186)
T ss_dssp ETTEEEEEECTTCEEETT
T ss_pred CCCCeeeECCCCCccCcc
Confidence 999999999999999854
|
| >2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* | Back alignment and structure |
|---|
| >2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* | Back alignment and structure |
|---|
| >1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A | Back alignment and structure |
|---|
| >4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* | Back alignment and structure |
|---|
| >4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* | Back alignment and structure |
|---|
| >2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A | Back alignment and structure |
|---|
| >1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} | Back alignment and structure |
|---|
| >1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A | Back alignment and structure |
|---|
| >2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A | Back alignment and structure |
|---|
| >1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A | Back alignment and structure |
|---|
| >2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A | Back alignment and structure |
|---|
| >1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A | Back alignment and structure |
|---|
| >1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* | Back alignment and structure |
|---|
| >1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 | Back alignment and structure |
|---|
| >4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* | Back alignment and structure |
|---|
| >1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* | Back alignment and structure |
|---|
| >1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* | Back alignment and structure |
|---|
| >1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A | Back alignment and structure |
|---|
| >1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* | Back alignment and structure |
|---|
| >1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A | Back alignment and structure |
|---|
| >1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* | Back alignment and structure |
|---|
| >1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} | Back alignment and structure |
|---|
| >2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... | Back alignment and structure |
|---|
| >2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* | Back alignment and structure |
|---|
| >3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* | Back alignment and structure |
|---|
| >2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A | Back alignment and structure |
|---|
| >2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... | Back alignment and structure |
|---|
| >3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} | Back alignment and structure |
|---|
| >1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* | Back alignment and structure |
|---|
| >2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A | Back alignment and structure |
|---|
| >3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} | Back alignment and structure |
|---|
| >2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* | Back alignment and structure |
|---|
| >1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A | Back alignment and structure |
|---|
| >1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A | Back alignment and structure |
|---|
| >1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} | Back alignment and structure |
|---|
| >2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} | Back alignment and structure |
|---|
| >2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A | Back alignment and structure |
|---|
| >1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* | Back alignment and structure |
|---|
| >1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... | Back alignment and structure |
|---|
| >2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... | Back alignment and structure |
|---|
| >1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A | Back alignment and structure |
|---|
| >1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A | Back alignment and structure |
|---|
| >1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A | Back alignment and structure |
|---|
| >1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* | Back alignment and structure |
|---|
| >3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D | Back alignment and structure |
|---|
| >1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A | Back alignment and structure |
|---|
| >1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* | Back alignment and structure |
|---|
| >1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* | Back alignment and structure |
|---|
| >1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A | Back alignment and structure |
|---|
| >3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D | Back alignment and structure |
|---|
| >2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* | Back alignment and structure |
|---|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
| >1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} | Back alignment and structure |
|---|
| >1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A | Back alignment and structure |
|---|
| >1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A | Back alignment and structure |
|---|
| >2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A | Back alignment and structure |
|---|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... | Back alignment and structure |
|---|
| >3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... | Back alignment and structure |
|---|
| >3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
| >1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A | Back alignment and structure |
|---|
| >2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* | Back alignment and structure |
|---|
| >1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
| >2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* | Back alignment and structure |
|---|
| >3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A | Back alignment and structure |
|---|
| >1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 | Back alignment and structure |
|---|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... | Back alignment and structure |
|---|
| >2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A | Back alignment and structure |
|---|
| >3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} | Back alignment and structure |
|---|
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... | Back alignment and structure |
|---|
| >1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A | Back alignment and structure |
|---|
| >3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A | Back alignment and structure |
|---|
| >1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A | Back alignment and structure |
|---|
| >2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 | Back alignment and structure |
|---|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A | Back alignment and structure |
|---|
| >2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A* | Back alignment and structure |
|---|
| >2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A | Back alignment and structure |
|---|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* | Back alignment and structure |
|---|
| >2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* | Back alignment and structure |
|---|
| >3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 | Back alignment and structure |
|---|
| >2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A* | Back alignment and structure |
|---|
| >3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens} | Back alignment and structure |
|---|
| >1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A | Back alignment and structure |
|---|
| >3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* | Back alignment and structure |
|---|
| >1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 | Back alignment and structure |
|---|
| >3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens} | Back alignment and structure |
|---|
| >3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 289 | |||
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.95 | |
| d1edmb_ | 39 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 98.93 | |
| d2c4fl1 | 37 | Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | 98.9 | |
| d2vj3a2 | 39 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.85 | |
| d1emoa1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.8 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.72 | |
| d2vj3a3 | 35 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.66 | |
| d1xkba1 | 39 | Factor X, N-terminal module {Human (Homo sapiens) | 98.65 | |
| d1lmja1 | 44 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.64 | |
| d1uzka1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.64 | |
| d1lmja2 | 42 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.55 | |
| d1emoa1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.48 | |
| d1apqa_ | 53 | Complement protease C1R {Human (Homo sapiens) [Tax | 98.41 | |
| d1edmb_ | 39 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 98.4 | |
| d2vj3a2 | 39 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.4 | |
| d1uzka2 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.39 | |
| d1lmja1 | 44 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.37 | |
| d1g1ta2 | 39 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 98.34 | |
| d1dx5i3 | 40 | Thrombomodulin, different EGF-like domains {Human | 98.33 | |
| d2c4fl1 | 37 | Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | 98.32 | |
| d1g1sa2 | 40 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 98.3 | |
| d1autl1 | 48 | Activated protein c (autoprothrombin IIa) {Human ( | 98.28 | |
| d1i0ua2 | 41 | Low density lipoprotein (LDL) receptor, different | 98.26 | |
| d1gl4a2 | 40 | EGF-like domain of nidogen-1 {Mouse (Mus musculus) | 98.26 | |
| d2vj3a3 | 35 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.24 | |
| d1gl4a2 | 40 | EGF-like domain of nidogen-1 {Mouse (Mus musculus) | 98.21 | |
| d1q4ga2 | 42 | Prostaglandin H2 synthase-1, EGF-like module {Shee | 98.2 | |
| d1xkba1 | 39 | Factor X, N-terminal module {Human (Homo sapiens) | 98.2 | |
| d1lmja2 | 42 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.19 | |
| d1uzka2 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.11 | |
| d1apqa_ | 53 | Complement protease C1R {Human (Homo sapiens) [Tax | 98.05 | |
| d1cvua2 | 41 | Prostaglandin H2 synthase-1, EGF-like module {Mous | 98.03 | |
| d1tpga1 | 41 | Plasminogen activator (tissue-type), t-PA {Human ( | 98.01 | |
| d1szba2 | 45 | Mannose-binding protein associated serine protease | 98.0 | |
| d1uzka1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.93 | |
| d1tpga1 | 41 | Plasminogen activator (tissue-type), t-PA {Human ( | 97.89 | |
| d1g1sa2 | 40 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 97.87 | |
| d1nt0a3 | 45 | Mannose-binding protein associated serine protease | 97.87 | |
| d1g1ta2 | 39 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 97.86 | |
| d1autl1 | 48 | Activated protein c (autoprothrombin IIa) {Human ( | 97.83 | |
| d1haea_ | 63 | Heregulin-alpha, EGF-like domain {Human (Homo sapi | 97.8 | |
| d1dx5i3 | 40 | Thrombomodulin, different EGF-like domains {Human | 97.7 | |
| d1i0ua2 | 41 | Low density lipoprotein (LDL) receptor, different | 97.65 | |
| d1nt0a3 | 45 | Mannose-binding protein associated serine protease | 97.6 | |
| d1szba2 | 45 | Mannose-binding protein associated serine protease | 97.56 | |
| d1q4ga2 | 42 | Prostaglandin H2 synthase-1, EGF-like module {Shee | 97.55 | |
| d3bpse1 | 40 | Low density lipoprotein (LDL) receptor, different | 97.54 | |
| d1nzia2 | 42 | Complement C1S component {Human (Homo sapiens) [Ta | 97.49 | |
| d1nqlb_ | 48 | Epidermal growth factor, EGF {Human (Homo sapiens) | 97.45 | |
| d3egfa_ | 53 | Epidermal growth factor, EGF {Mouse (Mus musculus) | 97.42 | |
| d1cvua2 | 41 | Prostaglandin H2 synthase-1, EGF-like module {Mous | 97.35 | |
| d3bpse1 | 40 | Low density lipoprotein (LDL) receptor, different | 97.33 | |
| d1nzia2 | 42 | Complement C1S component {Human (Homo sapiens) [Ta | 97.32 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.28 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.0 | |
| d1haea_ | 63 | Heregulin-alpha, EGF-like domain {Human (Homo sapi | 96.9 | |
| d3egfa_ | 53 | Epidermal growth factor, EGF {Mouse (Mus musculus) | 96.77 | |
| d1nqlb_ | 48 | Epidermal growth factor, EGF {Human (Homo sapiens) | 96.32 | |
| d1kigl_ | 51 | Factor X, N-terminal module {Cow (Bos taurus) [Tax | 96.21 | |
| d1autl2 | 50 | Activated protein c (autoprothrombin IIa) {Human ( | 95.64 | |
| d2p3ua1 | 51 | Factor X, N-terminal module {Human (Homo sapiens) | 95.42 | |
| d1k36a_ | 46 | Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI | 95.31 | |
| d1kigl_ | 51 | Factor X, N-terminal module {Cow (Bos taurus) [Tax | 95.3 | |
| d1autl2 | 50 | Activated protein c (autoprothrombin IIa) {Human ( | 95.16 | |
| d2p3ua1 | 51 | Factor X, N-terminal module {Human (Homo sapiens) | 94.93 | |
| d1k36a_ | 46 | Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI | 94.71 | |
| d1moxc_ | 49 | Transforming growth factor alpha {Human (Homo sapi | 94.22 | |
| d1ioxa_ | 50 | Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] | 94.11 | |
| d1ioxa_ | 50 | Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] | 94.06 | |
| d1ijqa2 | 50 | Low density lipoprotein (LDL) receptor, different | 93.56 | |
| d1ijqa2 | 50 | Low density lipoprotein (LDL) receptor, different | 93.18 | |
| d1moxc_ | 49 | Transforming growth factor alpha {Human (Homo sapi | 92.98 | |
| d2i9aa1 | 40 | Plasminogen activator (urokinase-type) {Human (Hom | 92.42 | |
| d2i9aa1 | 40 | Plasminogen activator (urokinase-type) {Human (Hom | 91.75 | |
| d1rfnb_ | 57 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 90.9 | |
| d1dx5i1 | 43 | Thrombomodulin, different EGF-like domains {Human | 90.69 | |
| d1rfnb_ | 57 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 87.61 | |
| d2bz6l1 | 53 | Coagulation factor VIIa {Human (Homo sapiens) [Tax | 84.88 | |
| d1xdtr_ | 41 | Heparin-binding epidermal growth factor, HBEGF {Hu | 84.36 | |
| d1xdtr_ | 41 | Heparin-binding epidermal growth factor, HBEGF {Hu | 83.24 |
| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Neurogenic locus notch homolog protein 1, Notch1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=3.2e-10 Score=66.89 Aligned_cols=38 Identities=34% Similarity=0.803 Sum_probs=35.0
Q ss_pred CCcCCCC--CCCCCCCCeeeeCCCCceeeCCCCccCCCCCCc
Q psy13158 10 LATLECY--PSPCGPYSECRNINGGPSCSCRPGYIGSPPNCR 49 (289)
Q Consensus 10 ~did~C~--~~~C~~~~~C~n~~gs~~C~C~~Gf~g~~~~C~ 49 (289)
.|||||. ++||.++|+|+++.++|.|.|++||+|. +|+
T Consensus 1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~--~Ce 40 (42)
T d2vj3a1 1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP--RCE 40 (42)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST--TSC
T ss_pred CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC--CCc
Confidence 3899999 6899999999999999999999999998 765
|
| >d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
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| >d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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