Psyllid ID: psy13524

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
Protein Sequence
SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDSTFL
Secondary Structure (PSIPRED)
ccEEcccccccccEEEEEEEccEEEEEEEEEcccEEEEcccccccHHHHHHHcccccccccccccccEEEcccccccccccEEEEEccccEEEcccccccccccccccccccHHHHHcccccccccccccccccEEEEEEcccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEEcccccccccccccccccccccccccHHHHHHHHccccccEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cEEEEccccccccEEEEEEEcccEEEEEEEccccEEEEcccccccHHHHHHHHHccccEccEEEEccccccccccccHHHHEEEEHccccEEEcccccccHHHHHHHHccccHcccccEEEcccccccccccccEEEEEEEccccccccccEEEcccEEEEEEccccccEEEEEcccccEEEEcHHHHHHccccccccccccHHcccccHHHHHHHHccccccEEEEEccccccc
Coil and Loop (DISEMBL)
sflvrpsdnspgdyslFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQiveghtlgfpvtrinlgifipsAIFRVTAVCgdfyiggrqfdSLSDLISYYSSCSDLLkrerlahpcpppepvndkkrIVAIlpytkmpdtdeltfqkgDIFFVHnelgdgwlWVTAHRTGEQGMIFRDLVEdldetidpntvfdwfhpectkndAVDMLVKagpvnftisesdstfl
Flexible Loop (DISEMBL)
sflvrpsdnspgdysLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVeghtlgfpvTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAhpcpppepvndkkRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPvnftisesdstfl
Low Complexity Region (SEG)
SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFdslsdlisyysscsdllKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDSTFL
Disordered region (IsUnstruct)
*************YSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL*************KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFT*********
Disordered Region (DISOPRED)
SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLK****************KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDS***
Disordered Region (DISEMBL)
*********SPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTI********
Disordered Region (DISPRO)
SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISES*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDSTFL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	235	2.2.26 [Sep-21-2011]
P50904	1038	Ras GTPase-activating pro	yes	N/A	0.646	0.146	0.568	6e-47
P20936	1047	Ras GTPase-activating pro	no	N/A	0.646	0.145	0.568	7e-47
P09851	1044	Ras GTPase-activating pro	yes	N/A	0.646	0.145	0.562	2e-46
P35991	659	Tyrosine-protein kinase B	no	N/A	0.442	0.157	0.229	4e-05
O77506	263	LIM and SH3 domain protei	no	N/A	0.263	0.235	0.365	7e-05
Q61792	263	LIM and SH3 domain protei	no	N/A	0.263	0.235	0.365	9e-05
Q99MZ8	263	LIM and SH3 domain protei	no	N/A	0.263	0.235	0.365	9e-05
Q3B7M5	260	LIM and SH3 domain protei	no	N/A	0.263	0.238	0.365	9e-05
Q5R5W0	261	LIM and SH3 domain protei	no	N/A	0.263	0.237	0.365	0.0001
Q14847	261	LIM and SH3 domain protei	no	N/A	0.263	0.237	0.365	0.0001

>sp|P50904|RASA1_RAT Ras GTPase-activating protein 1 OS=Rattus norvegicus GN=Rasa1 PE=3 SV=1

 Score =  187 bits (474), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 87/153 (56%), Positives = 114/153 (74%), Gaps = 1/153 (0%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+ A+CGD+YIGGR+F SLSDLI YYS  S LLK E+L +P  PPEPV D++R+ AILP
Sbjct: 221 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 280

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct: 281 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 340

Query: 202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
            WFH + +K +A ++L+  G V +F +  SD+T
Sbjct: 341 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 373

Inhibitory regulator of the Ras-cyclic AMP pathway. Stimulates the GTPase of normal but not oncogenic Ras p21.
Rattus norvegicus (taxid: 10116)

>sp|P20936|RASA1_HUMAN Ras GTPase-activating protein 1 OS=Homo sapiens GN=RASA1 PE=1 SV=1

 Score =  187 bits (474), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 87/153 (56%), Positives = 114/153 (74%), Gaps = 1/153 (0%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+ A+CGD+YIGGR+F SLSDLI YYS  S LLK E+L +P  PPEPV D++R+ AILP
Sbjct: 230 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 289

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct: 290 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 349

Query: 202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
            WFH + +K +A ++L+  G V +F +  SD+T
Sbjct: 350 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 382

Inhibitory regulator of the Ras-cyclic AMP pathway. Stimulates the GTPase of normal but not oncogenic Ras p21; this stimulation may be further increased in the presence of NCK1.

Homo sapiens (taxid: 9606)

>sp|P09851|RASA1_BOVIN Ras GTPase-activating protein 1 OS=Bos taurus GN=RASA1 PE=1 SV=1

 Score =  185 bits (470), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/153 (56%), Positives = 113/153 (73%), Gaps = 1/153 (0%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+ A+CGD+YIGGR+F SLSDLI YYS  S LLK E+L +P  PPEPV D++R+ AILP
Sbjct: 227 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 286

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct: 287 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 346

Query: 202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
            WFH + +K +A ++L+  G   +F +  SD+T
Sbjct: 347 IWFHGKISKQEAYNLLMTVGQACSFLVRPSDNT 379

Inhibitory regulator of the Ras-cyclic AMP pathway. Stimulates the GTPase of normal but not oncogenic Ras p21.

Bos taurus (taxid: 9913)

>sp|P35991|BTK_MOUSE Tyrosine-protein kinase BTK OS=Mus musculus GN=Btk PE=1 SV=4

 Score = 48.1 bits (113), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 113 DLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWV 172
            +LK+     P   P    + K++VA+  Y  M + ++L  +KG+ +F+  E    W W 
Sbjct: 196 QILKKPLPPEPTAAPISTTELKKVVALYDYMPM-NANDLQLRKGEEYFILEESNLPW-WR 253

Query: 173 TAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAG 221
              + G++G I  + + + +++I+   +++W+    T++ A  +L + G
Sbjct: 254 ARDKNGQEGYIPSNYITEAEDSIE---MYEWYSKHMTRSQAEQLLKQEG 299

Non-receptor tyrosine kinase indispensable for B lymphocyte development, differentiation and signaling. Binding of antigen to the B-cell antigen receptor (BCR) triggers signaling that ultimately leads to B-cell activation. After BCR engagement and activation at the plasma membrane, phosphorylates PLCG2 at several sites, igniting the downstream signaling pathway through calcium mobilization, followed by activation of the protein kinase C (PKC) family members. PLCG2 phosphorylation is performed in close cooperation with the adapter protein B-cell linker protein BLNK. BTK acts as a platform to bring together a diverse array of signaling proteins and is implicated in cytokine receptor signaling pathways. Plays an important role in the function of immune cells of innate as well as adaptive immunity, as a component of the Toll-like receptors (TLR) pathway. The TLR pathway acts as a primary surveillance system for the detection of pathogens and are crucial to the activation of host defense. Especially, is a critical molecule in regulating TLR9 activation in splenic B-cells. Within the TLR pathway, induces tyrosine phosphorylation of TIRAP which leads to TIRAP degradation. BTK plays also a critical role in transcription regulation. Induces the activity of NF-kappa-B, which is involved in regulating the expression of hundreds of genes. BTK is involved on the signaling pathway linking TLR8 and TLR9 to NF-kappa-B. Transiently phosphorylates transcription factor GTF2I on tyrosine residues in response to BCR. GTF2I then translocates to the nucleus to bind regulatory enhancer elements to modulate gene expression. ARID3A and NFAT are other transcriptional target of BTK. BTK is required for the formation of functional ARID3A DNA-binding complexes. There is however no evidence that BTK itself binds directly to DNA. BTK has a dual role in the regulation of apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|O77506|LASP1_RABIT LIM and SH3 domain protein 1 OS=Oryctolagus cuniculus GN=LASP1 PE=1 SV=1

 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV 188
           P    KR  A+  Y+   D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + V
Sbjct: 202 PGGGGKRYRAVFDYS-AADEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYV 260

Query: 189 EDL 191
           E +
Sbjct: 261 EAI 263

Plays an important role in the regulation of dynamic actin-based, cytoskeletal activities. Agonist-dependent changes in LASP1 phosphorylation may also serve to regulate actin-associated ion transport activities, not only in the parietal cell but also in certain other F-actin-rich secretory epithelial cell types.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q61792|LASP1_MOUSE LIM and SH3 domain protein 1 OS=Mus musculus GN=Lasp1 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV 188
           P    KR  A+  Y+   D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + V
Sbjct: 202 PGGGGKRYRAVYDYSAA-DEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYV 260

Query: 189 EDL 191
           E +
Sbjct: 261 EAI 263

Plays an important role in the regulation of dynamic actin-based, cytoskeletal activities. Agonist-dependent changes in LASP1 phosphorylation may also serve to regulate actin-associated ion transport activities, not only in the parietal cell but also in certain other F-actin-rich secretory epithelial cell types.

Mus musculus (taxid: 10090)

>sp|Q99MZ8|LASP1_RAT LIM and SH3 domain protein 1 OS=Rattus norvegicus GN=Lasp1 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV 188
           P    KR  A+  Y+   D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + V
Sbjct: 202 PGGGGKRYRAVYDYSAA-DEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYV 260

Query: 189 EDL 191
           E +
Sbjct: 261 EAI 263

Plays an important role in the regulation of dynamic actin-based, cytoskeletal activities. Agonist-dependent changes in LASP1 phosphorylation may also serve to regulate actin-associated ion transport activities, not only in the parietal cell but also in certain other F-actin-rich secretory epithelial cell types.

Rattus norvegicus (taxid: 10116)

>sp|Q3B7M5|LASP1_BOVIN LIM and SH3 domain protein 1 OS=Bos taurus GN=LASP1 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV 188
           P    KR  A+  Y+   D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + V
Sbjct: 199 PGGGGKRYRAVYDYSAA-DEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYV 257

Query: 189 EDL 191
           E +
Sbjct: 258 EAI 260

Plays an important role in the regulation of dynamic actin-based, cytoskeletal activities. Agonist-dependent changes in LASP1 phosphorylation may also serve to regulate actin-associated ion transport activities, not only in the parietal cell but also in certain other F-actin-rich secretory epithelial cell types.

Bos taurus (taxid: 9913)

>sp|Q5R5W0|LASP1_PONAB LIM and SH3 domain protein 1 OS=Pongo abelii GN=LASP1 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV 188
           P    KR  A+  Y+   D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + V
Sbjct: 200 PGGGGKRYRAVYDYSAA-DEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYV 258

Query: 189 EDL 191
           E +
Sbjct: 259 EAI 261

Plays an important role in the regulation of dynamic actin-based, cytoskeletal activities. Agonist-dependent changes in LASP1 phosphorylation may also serve to regulate actin-associated ion transport activities, not only in the parietal cell but also in certain other F-actin-rich secretory epithelial cell types.

Pongo abelii (taxid: 9601)

>sp|Q14847|LASP1_HUMAN LIM and SH3 domain protein 1 OS=Homo sapiens GN=LASP1 PE=1 SV=2

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV 188
           P    KR  A+  Y+   D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + V
Sbjct: 200 PGGGGKRYRAVYDYSAA-DEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYV 258

Query: 189 EDL 191
           E +
Sbjct: 259 EAI 261

Plays an important role in the regulation of dynamic actin-based, cytoskeletal activities. Agonist-dependent changes in LASP1 phosphorylation may also serve to regulate actin-associated ion transport activities, not only in the parietal cell but also in certain other F-actin-rich secretory epithelial cell types.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
193606011	927	PREDICTED: ras GTPase-activating protein	0.642	0.162	0.842	3e-73
332016402	945	Ras GTPase-activating protein 1 [Acromyr	0.646	0.160	0.809	1e-72
383851951	945	PREDICTED: ras GTPase-activating protein	0.646	0.160	0.809	1e-72
328789390	945	PREDICTED: ras GTPase-activating protein	0.646	0.160	0.809	1e-72
340710276	945	PREDICTED: ras GTPase-activating protein	0.646	0.160	0.809	1e-72
350423569	945	PREDICTED: ras GTPase-activating protein	0.646	0.160	0.809	1e-72
307187657	936	Ras GTPase-activating protein 1 [Campono	0.646	0.162	0.809	2e-72
328789388	907	PREDICTED: ras GTPase-activating protein	0.646	0.167	0.809	2e-72
307193743	917	Ras GTPase-activating protein 1 [Harpegn	0.646	0.165	0.809	2e-72
194894020	954	GG19350 [Drosophila erecta] gi|190649639	0.646	0.159	0.815	1e-71

>gi|193606011|ref|XP_001942745.1| PREDICTED: ras GTPase-activating protein 1-like [Acyrthosiphon pisum]

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 141/152 (92%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FRVTAVCGDFYIGGRQFDSLSDLI YY++CSDLLKRERLA+P  PPEPVNDKKR+VAILP
Sbjct: 110 FRVTAVCGDFYIGGRQFDSLSDLIGYYTNCSDLLKRERLAYPVAPPEPVNDKKRVVAILP 169

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDELTFQKGDIFFVHN++GDGWLWVTAHRTGEQGMIFRDLV+ LDE IDPNTVF
Sbjct: 170 YTKMPDTDELTFQKGDIFFVHNDMGDGWLWVTAHRTGEQGMIFRDLVDHLDENIDPNTVF 229

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
           DWFHP  TKN+AVDMLVK+GP +F +  SD++
Sbjct: 230 DWFHPGVTKNEAVDMLVKSGPGSFLVRPSDNS 261

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016402|gb|EGI57315.1| Ras GTPase-activating protein 1 [Acromyrmex echinatior]

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 142/152 (93%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 126 FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 185

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 186 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 245

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK++AVDMLVKAGP +F +  SD++
Sbjct: 246 SWFHPNVTKSEAVDMLVKAGPGSFLVRPSDNS 277

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851951|ref|XP_003701494.1| PREDICTED: ras GTPase-activating protein 1-like [Megachile rotundata]

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 142/152 (93%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 126 FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 185

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 186 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 245

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK++AVDMLVKAGP +F +  SD++
Sbjct: 246 SWFHPNVTKSEAVDMLVKAGPGSFLVRPSDNS 277

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789390|ref|XP_003251268.1| PREDICTED: ras GTPase-activating protein 1-like isoform 1 [Apis mellifera] gi|380026365|ref|XP_003696922.1| PREDICTED: ras GTPase-activating protein 1-like [Apis florea]

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 142/152 (93%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 126 FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 185

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 186 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 245

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK++AVDMLVKAGP +F +  SD++
Sbjct: 246 SWFHPNVTKSEAVDMLVKAGPGSFLVRPSDNS 277

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710276|ref|XP_003393719.1| PREDICTED: ras GTPase-activating protein 1-like [Bombus terrestris]

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 142/152 (93%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 126 FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 185

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 186 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 245

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK++AVDMLVKAGP +F +  SD++
Sbjct: 246 SWFHPNVTKSEAVDMLVKAGPGSFLVRPSDNS 277

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423569|ref|XP_003493522.1| PREDICTED: ras GTPase-activating protein 1-like [Bombus impatiens]

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 142/152 (93%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 126 FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 185

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 186 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 245

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK++AVDMLVKAGP +F +  SD++
Sbjct: 246 SWFHPNVTKSEAVDMLVKAGPGSFLVRPSDNS 277

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187657|gb|EFN72629.1| Ras GTPase-activating protein 1 [Camponotus floridanus]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 142/152 (93%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 126 FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 185

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 186 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 245

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK++AVDMLVKAGP +F +  SD++
Sbjct: 246 SWFHPNVTKSEAVDMLVKAGPGSFLVRPSDNS 277

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789388|ref|XP_394287.3| PREDICTED: ras GTPase-activating protein 1-like isoform 2 [Apis mellifera]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 142/152 (93%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 88  FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 147

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 148 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 207

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK++AVDMLVKAGP +F +  SD++
Sbjct: 208 SWFHPNVTKSEAVDMLVKAGPGSFLVRPSDNS 239

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193743|gb|EFN76425.1| Ras GTPase-activating protein 1 [Harpegnathos saltator]

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 141/152 (92%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGD+YIGGRQF+SLSDL++YY+ CSDLLKRERL HP PPPEPVNDKKRIVAILP
Sbjct: 126 FRITAVCGDYYIGGRQFNSLSDLVAYYTHCSDLLKRERLIHPTPPPEPVNDKKRIVAILP 185

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMPDTDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQG+IFR+LVEDLD++IDPNTVF
Sbjct: 186 YTKMPDTDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGLIFRELVEDLDDSIDPNTVF 245

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP  TK +AVDMLVKAGP +F +  SD++
Sbjct: 246 SWFHPNVTKGEAVDMLVKAGPGSFLVRPSDNS 277

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194894020|ref|XP_001977990.1| GG19350 [Drosophila erecta] gi|190649639|gb|EDV46917.1| GG19350 [Drosophila erecta]

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 124/152 (81%), Positives = 140/152 (92%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILP 141
           FR+TAVCGDFYIGGRQF SLSDL+ YY+SCSDLLKRERLA P  PPEPVNDKKR+VAILP
Sbjct: 132 FRITAVCGDFYIGGRQFISLSDLVGYYTSCSDLLKRERLAIPVAPPEPVNDKKRVVAILP 191

Query: 142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
           YTKMP+TDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQGMIFR+LV+DLD +IDPNTVF
Sbjct: 192 YTKMPETDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGMIFRELVDDLDVSIDPNTVF 251

Query: 202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            WFHP CTKN+AVDMLVKAGP +F +  SD++
Sbjct: 252 PWFHPNCTKNEAVDMLVKAGPGSFLVRPSDNS 283

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
FB|FBgn0003969	954	vap "vacuolar peduncle" [Droso	0.646	0.159	0.730	1.4e-59
UNIPROTKB|Q68CU6	539	DKFZp434N071 "Putative unchara	0.646	0.282	0.490	7e-38
UNIPROTKB|F1NCI3	388	LOC100859467 "Uncharacterized	0.646	0.391	0.483	3.9e-37
UNIPROTKB|B4DTL2	880	RASA1 "Ras GTPase-activating p	0.646	0.172	0.490	6.9e-37
UNIPROTKB|E9PGC0	881	RASA1 "Ras GTPase-activating p	0.646	0.172	0.490	6.9e-37
UNIPROTKB|F1PGT1	1024	RASA1 "Uncharacterized protein	0.646	0.148	0.490	9.9e-37
RGD|3537	1038	Rasa1 "RAS p21 protein activat	0.646	0.146	0.490	1e-36
UNIPROTKB|P50904	1038	Rasa1 "Ras GTPase-activating p	0.646	0.146	0.490	1e-36
UNIPROTKB|F1N7N8	1044	RASA1 "Ras GTPase-activating p	0.646	0.145	0.490	1e-36
UNIPROTKB|P20936	1047	RASA1 "Ras GTPase-activating p	0.646	0.145	0.490	1e-36

FB|FBgn0003969 vap "vacuolar peduncle" [Drosophila melanogaster (taxid:7227)]

 Score = 616 (221.9 bits), Expect = 1.4e-59, P = 1.4e-59
 Identities = 111/152 (73%), Positives = 125/152 (82%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+TAVCGDFYIGGRQF                 KRERLA P  PPEPVNDKKR+VAILP
Sbjct:   132 FRITAVCGDFYIGGRQFISLSDLVGYYTSCSDLLKRERLAIPVAPPEPVNDKKRVVAILP 191

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTKMP+TDEL+FQKGDIFFVHN++GDGWLWVTAHRTGEQGMIFR+LV+DLD +IDPNTVF
Sbjct:   192 YTKMPETDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGMIFRELVDDLDVSIDPNTVF 251

Query:   202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
              WFHP CTKN+AVDMLVKAGP +F +  SD++
Sbjct:   252 PWFHPNCTKNEAVDMLVKAGPGSFLVRPSDNS 283

GO:0016319 "mushroom body development" evidence=IMP

GO:0005099 "Ras GTPase activator activity" evidence=ISS;IBA;IDA

GO:0005737 "cytoplasm" evidence=IBA;IDA

GO:0010741 "negative regulation of intracellular protein kinase cascade" evidence=IGI

GO:0040008 "regulation of growth" evidence=IMP

GO:0032320 "positive regulation of Ras GTPase activity" evidence=IBA;IDA

GO:0048149 "behavioral response to ethanol" evidence=IMP

GO:0005543 "phospholipid binding" evidence=IEA

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=IBA

GO:0031235 "intrinsic to internal side of plasma membrane" evidence=IBA

UNIPROTKB|Q68CU6 DKFZp434N071 "Putative uncharacterized protein DKFZp434N071" [Homo sapiens (taxid:9606)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:   230 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 289

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   290 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 349

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   350 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 382

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1NCI3 LOC100859467 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 74/153 (48%), Positives = 101/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L  P  PPEPV D++R+ AILP
Sbjct:    77 FRIIAMCGDYYIGGRRFASLSDLIGYYSHVSCLLKGEKLLFPVAPPEPVEDRRRVRAILP 136

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+P+TDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   137 YTKVPETDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 196

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   197 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 229

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|B4DTL2 RASA1 "Ras GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 406 (148.0 bits), Expect = 6.9e-37, P = 6.9e-37
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:    63 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 122

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   123 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 182

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   183 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 215

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|E9PGC0 RASA1 "Ras GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 406 (148.0 bits), Expect = 6.9e-37, P = 6.9e-37
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:    64 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 123

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   124 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 183

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   184 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 216

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|F1PGT1 RASA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 406 (148.0 bits), Expect = 9.9e-37, P = 9.9e-37
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:   207 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 266

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   267 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 326

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   327 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 359

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

RGD|3537 Rasa1 "RAS p21 protein activator (GTPase activating protein) 1" [Rattus norvegicus (taxid:10116)]

 Score = 406 (148.0 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:   221 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 280

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   281 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 340

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   341 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 373

GO:0000910 "cytokinesis" evidence=ISS

GO:0001570 "vasculogenesis" evidence=ISS

GO:0001726 "ruffle" evidence=IEA;ISO

GO:0001948 "glycoprotein binding" evidence=IEA;ISO

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=IEA;ISO;ISS

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005099 "Ras GTPase activator activity" evidence=IBA

GO:0005102 "receptor binding" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=IBA

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0007155 "cell adhesion" evidence=NAS

GO:0007162 "negative regulation of cell adhesion" evidence=ISO;ISS

GO:0007165 "signal transduction" evidence=IEA;ISO;ISS

GO:0009790 "embryo development" evidence=ISS

GO:0030036 "actin cytoskeleton organization" evidence=NAS

GO:0030833 "regulation of actin filament polymerization" evidence=IEA;ISO;ISS

GO:0031235 "intrinsic to internal side of plasma membrane" evidence=IBA

GO:0032320 "positive regulation of Ras GTPase activity" evidence=IBA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=ISS

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=IBA

GO:0051020 "GTPase binding" evidence=IEA;ISO

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|P50904 Rasa1 "Ras GTPase-activating protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 406 (148.0 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:   221 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 280

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   281 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 340

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   341 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 373

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1N7N8 RASA1 "Ras GTPase-activating protein 1" [Bos taurus (taxid:9913)]

 Score = 406 (148.0 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:   227 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 286

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   287 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 346

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   347 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 379

GO:0051020 "GTPase binding" evidence=IEA

GO:0030833 "regulation of actin filament polymerization" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=IEA

GO:0001948 "glycoprotein binding" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|P20936 RASA1 "Ras GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 406 (148.0 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 75/153 (49%), Positives = 102/153 (66%)

Query:    82 FRVTAVCGDFYIGGRQFXXXXXXXXXXXXXXXXXKRERLAHPCPPPEPVNDKKRIVAILP 141
             FR+ A+CGD+YIGGR+F                 K E+L +P  PPEPV D++R+ AILP
Sbjct:   230 FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILP 289

Query:   142 YTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVF 201
             YTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++    DP+   
Sbjct:   290 YTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGK 349

Query:   202 DWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
              WFH + +K +A ++L+  G V +F +  SD+T
Sbjct:   350 IWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT 382

GO:0005543 "phospholipid binding" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005099 "Ras GTPase activator activity" evidence=IBA

GO:0005737 "cytoplasm" evidence=NAS;IBA

GO:0031235 "intrinsic to internal side of plasma membrane" evidence=IBA

GO:0032320 "positive regulation of Ras GTPase activity" evidence=IBA

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=IBA

GO:0001570 "vasculogenesis" evidence=ISS

GO:0009790 "embryo development" evidence=ISS

GO:0043524 "negative regulation of neuron apoptotic process" evidence=ISS

GO:0007165 "signal transduction" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005102 "receptor binding" evidence=IPI

GO:0035556 "intracellular signal transduction" evidence=NAS

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=IDA

GO:0030833 "regulation of actin filament polymerization" evidence=IDA

GO:0007162 "negative regulation of cell adhesion" evidence=IDA

GO:0000910 "cytokinesis" evidence=ISS

GO:0019870 "potassium channel inhibitor activity" evidence=NAS

GO:0008360 "regulation of cell shape" evidence=NAS

GO:0051252 "regulation of RNA metabolic process" evidence=NAS

GO:0001948 "glycoprotein binding" evidence=IPI

GO:0051020 "GTPase binding" evidence=IPI

GO:0005829 "cytosol" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P50904	RASA1_RAT	No assigned EC number	0.5686	0.6468	0.1464	yes	N/A
P09851	RASA1_BOVIN	No assigned EC number	0.5620	0.6468	0.1455	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	235
cd11788	59	cd11788, SH3_RasGAP, Src Homology 3 domain of Ras	1e-33
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	1e-25
cd10353	103	cd10353, SH2_Nterm_RasGAP, N-terminal Src homology	3e-18
smart00252	84	smart00252, SH2, Src homology 2 domains	8e-14
pfam00017	77	pfam00017, SH2, SH2 domain	2e-09
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	5e-09
smart00326	56	smart00326, SH3, Src homology 3 domains	2e-08
pfam00018	47	pfam00018, SH3_1, SH3 domain	2e-08
cd11789	55	cd11789, SH3_Nebulin_family_C, C-terminal Src Homo	3e-08
cd11934	59	cd11934, SH3_Lasp1_C, C-terminal Src Homology 3 do	1e-07
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	4e-07
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	5e-07
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	6e-07
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	1e-06
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	2e-06
cd10408	97	cd10408, SH2_Nck1, Src homology 2 (SH2) domain fou	7e-06
cd11785	55	cd11785, SH3_SH3RF_C, C-terminal (Fourth) Src Homo	9e-06
cd10340	99	cd10340, SH2_N-SH2_SHP_like, N-terminal Src homolo	1e-05
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	1e-05
cd10353	103	cd10353, SH2_Nterm_RasGAP, N-terminal Src homology	2e-05
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	4e-05
cd10409	98	cd10409, SH2_Nck2, Src homology 2 (SH2) domain fou	4e-05
cd11826	52	cd11826, SH3_Abi, Src homology 3 domain of Abl Int	5e-05
cd11933	58	cd11933, SH3_Nebulin_C, C-terminal Src Homology 3	5e-05
cd11790	64	cd11790, SH3_Amphiphysin, Src Homology 3 domain of	7e-05
cd10360	79	cd10360, SH2_Srm, Src homology 2 (SH2) domain foun	8e-05
cd11935	58	cd11935, SH3_Nebulette_C, C-terminal Src Homology	8e-05
cd11940	55	cd11940, SH3_ARHGEF5_19, Src homology 3 domain of	3e-04
cd11770	54	cd11770, SH3_Nephrocystin, Src Homology 3 domain o	5e-04
cd11823	53	cd11823, SH3_Nostrin, Src homology 3 domain of Nit	0.001
cd10348	86	cd10348, SH2_Cterm_shark_like, C-terminal Src homo	0.001
cd11783	55	cd11783, SH3_SH3RF_3, Third Src Homology 3 domain	0.002
cd11926	55	cd11926, SH3_SH3RF1_3, Third Src Homology 3 domain	0.002
cd11855	55	cd11855, SH3_Sho1p, Src homology 3 domain of High	0.002
cd09941	95	cd09941, SH2_Grb2_like, Src homology 2 domain foun	0.003
cd11878	54	cd11878, SH3_Bem1p_1, First Src Homology 3 domain	0.003
cd11972	61	cd11972, SH3_Abi2, Src homology 3 domain of Abl In	0.004

>gnl|CDD|212722 cd11788, SH3_RasGAP, Src Homology 3 domain of Ras GTPase-Activating Protein 1

 Score =  115 bits (289), Expect = 1e-33
 Identities = 44/59 (74%), Positives = 53/59 (89%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           ++R+ AILPY K+PDTDEL+FQKGDIF VHNEL DGWLWVT+ RTGE G++FRDLVE+L
Sbjct: 1   RRRVRAILPYNKVPDTDELSFQKGDIFVVHNELEDGWLWVTSLRTGESGLVFRDLVEEL 59

RasGAP, also called Ras p21 protein activator, RASA1, or p120RasGAP, is part of the GAP1 family of GTPase-activating proteins. It is a 120kD cytosolic protein containing an SH3 domain flanked by two SH2 domains at the N-terminal end, a pleckstrin homology (PH) domain, a calcium dependent phospholipid binding domain (CaLB/C2), and a C-terminal catalytic GAP domain. It stimulates the GTPase activity of normal RAS p21. It acts as a positive effector of Ras in tumor cells. It also functions as a regulator downstream of tyrosine receptors such as those of PDGF, EGF, ephrin, and insulin, among others. The SH3 domain of RasGAP is unable to bind proline-rich sequences but have been shown to interact with protein partners such as the G3BP protein, Aurora kinases, and the Calpain small subunit 1. The RasGAP SH3 domain is necessary for the downstream signaling of Ras and it also influences Rho-mediated cytoskeletal reorganization. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 95.2 bits (237), Expect = 1e-25
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGRTFECLDAVINRY 53
          SFLVR SDN+PGDYSL F +N  I+ F+I      +++MGGR F  LD VI+RY
Sbjct: 24 SFLVRESDNTPGDYSLSFRVNEGIKHFKIIPTGNNQFMMGGRYFSSLDDVIDRY 77

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|198216 cd10353, SH2_Nterm_RasGAP, N-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 76.8 bits (189), Expect = 3e-18
 Identities = 25/35 (71%), Positives = 29/35 (82%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLK 116
           FR+ A+CGD+YIGGR+F SLSDLI YYS  S LLK
Sbjct: 69  FRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLK 103

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general the longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the N-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 64.6 bits (158), Expect = 8e-14
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
           FLVR S++SPGDY L   +  +++ +RI +      YL GGR F  L  ++  Y+K  +
Sbjct: 24 DFLVRDSESSPGDYVLSVRVKGKVKHYRIRRNEDGKFYLEGGRKFPSLVELVEHYQKNSL 83

Query: 59 V 59
           
Sbjct: 84 G 84

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRY 53
          +FLVR S++ PGDY+L    + +++ +RI+       Y+ GG TF  L  ++  Y
Sbjct: 23 TFLVRESESKPGDYTLSVRDDGRVKHYRIQSLDNGGYYISGGVTFNSLPELVEHY 77

Length = 77

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 51.9 bits (125), Expect = 5e-09
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
          +FLVRPS+  P  +++ F    +I+  RI+++   +++G   FE L  +++ Y K  +  
Sbjct: 28 AFLVRPSETDPNSFAISFRAEGKIKHCRIKQEGRLFVIGTSQFESLVELVSYYEKHPLYR 87

Query: 61 GHTLGFPVTR 70
             L +PV  
Sbjct: 88 KIKLRYPVNE 97

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +  ++ A+  YT   D DEL+F+KGDI  V  +  DGW      R G++G+ 
Sbjct: 1   EGPQVRALYDYTA-QDPDELSFKKGDIITVLEKSDDGWWKGRLGR-GKEGLF 50

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           VA+  YT     DEL+F+KGDI  V  +  DGW W    + G++G+I
Sbjct: 1   VALYDYTAREP-DELSFKKGDIIIVLEKSDDGW-WKGRLKGGKEGLI 45

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212723 cd11789, SH3_Nebulin_family_C, C-terminal Src Homology 3 domain of the Nebulin family of proteins

 Score = 48.9 bits (117), Expect = 3e-08
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           R  A+  Y    D DE++FQ+GD+      + DGW+  T  RTG+ GM+  + VE
Sbjct: 1   RYRAMYDYAAA-DDDEVSFQEGDVIINVEIIDDGWMEGTVQRTGQSGMLPANYVE 54

Nebulin family proteins contain multiple nebulin repeats, and may contain an N-terminal LIM domain and/or a C-terminal SH3 domain. They have molecular weights ranging from 34 to 900 kD, depending on the number of nebulin repeats, and they all bind actin. They are involved in the regulation of actin filament architecture and function as stabilizers and scaffolds for cytoskeletal structures with which they associate, such as long actin filaments or focal adhesions. Nebulin family proteins that contain a C-terminal SH3 domain include the giant filamentous protein nebulin, nebulette, Lasp1, and Lasp2. Lasp2, also called LIM-nebulette, is an alternatively spliced variant of nebulette. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212867 cd11934, SH3_Lasp1_C, C-terminal Src Homology 3 domain of LIM and SH3 domain protein 1

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           KR  A+  Y    D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + VE
Sbjct: 3   KRYRAVYDYNA-ADEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYVE 57

Lasp1 is a cytoplasmic protein that binds focal adhesion proteins and is involved in cell signaling, migration, and proliferation. It is overexpressed in several cancer cells including breast, ovarian, bladder, and liver. In cancer cells, it can be found in the nucleus; its degree of nuclear localization correlates with tumor size and poor prognosis. Lasp1 is a 36kD protein containing an N-terminal LIM domain, two nebulin repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQ-IQRFRIEKKAVRYLMGGR-TFECLDAVINRYRKEQI 58
          SFLVR S + PGD+ L    ++  +    I  +  +Y +GG   F+ L  ++  Y+K  +
Sbjct: 24 SFLVRESQSKPGDFVLSVRTDDDKVTHIMIRCQGGKYDVGGGEEFDSLTDLVEHYKKNPM 83

Query: 59 VE 60
          VE
Sbjct: 84 VE 85

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 1  SFLVRPSDNSPGDYSL-FFHINNQIQRFRIEKKAVRYLMG---GRTFECLDAVINRY 53
          +FLVR S + PGDY L     + +++ + IE+    Y +    GRTF  L  ++  Y
Sbjct: 23 TFLVRESSSEPGDYVLSVRSGDGKVKHYLIERNEGGYYLLGGSGRTFPSLPELVEHY 79

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-----YLMGGRTFECLDAVINRYRK 55
          +FLVR S+   GDY+L F  N ++Q  RI  +        YL     F+ L  +I+ YR+
Sbjct: 32 TFLVRESETFVGDYTLSFWRNGKVQHCRIRSRQENGEKKYYLTDNLVFDSLYELIDYYRQ 91

Query: 56 EQI 58
            +
Sbjct: 92 NPL 94

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 18/57 (31%), Positives = 33/57 (57%)

Query: 2  FLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI 58
          FL+R S+++PGDYS+      + + F+++     Y +G R F  +D ++  Y+K  I
Sbjct: 26 FLIRDSESNPGDYSVSLKAPGRNKHFKVQVVDNVYCIGQRKFHTMDELVEHYKKAPI 82

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 43.2 bits (103), Expect = 2e-06
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            A+  Y    D DEL+F+KGDI  V  +  DGW     +  G +G+ 
Sbjct: 3   RALYDYEA-QDDDELSFKKGDIITVLEKDDDGWWEGELNG-GREGLF 47

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|198271 cd10408, SH2_Nck1, Src homology 2 (SH2) domain found in Nck

 Score = 43.1 bits (101), Expect = 7e-06
 Identities = 17/57 (29%), Positives = 33/57 (57%)

Query: 2  FLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI 58
          FL+R S++SP D+S+      + + F+++ K   Y +G R F  ++ ++  Y+K  I
Sbjct: 26 FLIRDSESSPNDFSVSLKAQGKNKHFKVQLKECVYCIGQRKFSSMEELVEHYKKAPI 82

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|212719 cd11785, SH3_SH3RF_C, C-terminal (Fourth) Src Homology 3 domain of SH3 domain containing ring finger 1 (SH3RF1), SH3RF3, and similar domains

 Score = 41.7 bits (98), Expect = 9e-06
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 135 RIVAILPYTKMPDTD-ELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           R   I+PY   P ++ EL  ++GDI FVH +  DGW   T  RTG+ G+     VE
Sbjct: 1   RYRVIVPYP--PQSEAELELKEGDIVFVHKKREDGWFKGTLQRTGKTGLFPGSFVE 54

SH3RF1 (or POSH) and SH3RF3 (or POSH2) are scaffold proteins that function as E3 ubiquitin-protein ligases. They contain an N-terminal RING finger domain and four SH3 domains. This model represents the fourth SH3 domain, located at the C-terminus of SH3RF1 and SH3RF3, and similar domains. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|198203 cd10340, SH2_N-SH2_SHP_like, N-terminal Src homology 2 (N-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQ 57
          SFL RPS ++PGD++L     +++   +I+     Y L GG  F  L  ++  Y ++ 
Sbjct: 24 SFLARPSKSNPGDFTLSVRRGDEVTHIKIQNTGDYYDLYGGEKFATLSELVQYYMEQH 81

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [IVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           VA+  Y    D D+L+F+KGD   + ++    W       TG++G I
Sbjct: 3   VALYDYEARTD-DDLSFKKGDRLQILDDSDGDWWLARHLSTGKEGYI 48

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|198216 cd10353, SH2_Nterm_RasGAP, N-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 41.7 bits (98), Expect = 2e-05
 Identities = 20/53 (37%), Positives = 26/53 (49%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRY 53
          S+L+R SD  PG + L F     +  FRI      Y +GGR F  L  +I  Y
Sbjct: 43 SYLIRESDRRPGSFVLSFLSRTGVNHFRIIAMCGDYYIGGRRFSSLSDLIGYY 95

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general the longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the N-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 40.5 bits (95), Expect = 4e-05
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 203 WFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
           WFH + ++ +A +MLVK G   +F + ESD+T
Sbjct: 2   WFHGKISREEAYNMLVKVGGPGSFLVRESDNT 33

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|198272 cd10409, SH2_Nck2, Src homology 2 (SH2) domain found in Nck

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 17/57 (29%), Positives = 32/57 (56%)

Query: 2  FLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI 58
          FL+R S++SP D+S+      + + F+++     Y +G R F  +D ++  Y+K  I
Sbjct: 26 FLIRDSESSPSDFSVSLKAVGKNKHFKVQLVDNVYCIGQRRFNSMDELVEHYKKAPI 82

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|212760 cd11826, SH3_Abi, Src homology 3 domain of Abl Interactor proteins

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGW 169
           ++VA+  YT   D DEL+FQ+GDI +V  +  DGW
Sbjct: 1   KVVALYDYTADKD-DELSFQEGDIIYVTKKNDDGW 34

Abl interactor (Abi) proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. They localize to sites of actin polymerization in epithelial adherens junction and immune synapses, as well as to the leading edge of lamellipodia. Vertebrates contain two Abi proteins, Abi1 and Abi2. Abi1 displays a wide expression pattern while Abi2 is highly expressed in the eye and brain. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212866 cd11933, SH3_Nebulin_C, C-terminal Src Homology 3 domain of Nebulin

 Score = 39.6 bits (92), Expect = 5e-05
 Identities = 16/45 (35%), Positives = 27/45 (60%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           D DE++F+ GD       + +GW++ T  RTG+ GM+  + VE +
Sbjct: 14  DDDEVSFKDGDTIVNVQTIDEGWMYGTVQRTGKTGMLPANYVEAI 58

Nebulin is a giant filamentous protein (600-900 kD) that is expressed abundantly in skeletal muscle. It binds to actin thin filaments and regulates its assembly and function. Nebulin was thought to be part of a molecular ruler complex that is critical in determining the lengths of actin thin filaments in skeletal muscle since its length, which varies due to alternative splicing, correlates with the length of thin filaments in various muscle types. Recent studies indicate that nebulin regulates thin filament length by stabilizing the filaments and preventing depolymerization. Mutations in nebulin can cause nemaline myopathy, characterized by muscle weakness which can be severe and can lead to neonatal lethality. Nebulin contains an N-terminal LIM domain, many nebulin repeats/super repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212724 cd11790, SH3_Amphiphysin, Src Homology 3 domain of Amphiphysin and related domains

 Score = 39.6 bits (93), Expect = 7e-05
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 6/53 (11%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFV-----HNELGDGWLWVTAHRTGEQGM 182
           ++ A   YT   DTDELTF+KGD+  V       E  +GWL      TG +G+
Sbjct: 4   KVRATHDYTAE-DTDELTFEKGDVILVIPFDDPEEQDEGWLMGVKESTGCRGV 55

Amphiphysins function primarily in endocytosis and other membrane remodeling events. They exist in several isoforms and mammals possess two amphiphysin proteins from distinct genes. Amphiphysin I proteins, enriched in the brain and nervous system, contain domains that bind clathrin, Adaptor Protein complex 2 (AP2), dynamin, and synaptojanin. They function in synaptic vesicle endocytosis. Human autoantibodies to amphiphysin I hinder GABAergic signaling and contribute to the pathogenesis of paraneoplastic stiff-person syndrome. Some amphiphysin II isoforms, also called Bridging integrator 1 (Bin1), are localized in many different tissues and may function in intracellular vesicle trafficking. In skeletal muscle, Bin1 plays a role in the organization and maintenance of the T-tubule network. Mutations in Bin1 are associated with autosomal recessive centronuclear myopathy. Amphiphysins contain an N-terminal BAR domain with an additional N-terminal amphipathic helix (an N-BAR), a variable central domain, and a C-terminal SH3 domain. The SH3 domain of amphiphysins bind proline-rich motifs present in binding partners such as dynamin, synaptojanin, and nsP3. It also belongs to a subset of SH3 domains that bind ubiquitin in a site that overlaps with the peptide binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 64

>gnl|CDD|198223 cd10360, SH2_Srm, Src homology 2 (SH2) domain found in Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristoylation sites (srm)

 Score = 39.9 bits (93), Expect = 8e-05
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRY 53
          +FL+RPS++S G YSL      ++  +RI        YL  GR F  L+ ++  Y
Sbjct: 25 AFLIRPSESSLGGYSLSVRAQAKVCHYRICMAPSGSLYLQKGRLFPGLEELLAYY 79

Srm is a nonreceptor protein kinase that has two SH2 domains, a SH3 domain, and a kinase domain with a tyrosine residue for autophosphorylation. However it lacks an N-terminal glycine for myristoylation and a C-terminal tyrosine which suppresses kinase activity when phosphorylated. Srm is most similar to members of the Tec family who other members include: Tec, Btk/Emb, and Itk/Tsk/Emt. However Srm differs in its N-terminal unique domain it being much smaller than in the Tec family and is closer to Src. Srm is thought to be a new family of nonreceptor tyrosine kinases that may be redundant in function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 79

>gnl|CDD|212868 cd11935, SH3_Nebulette_C, C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)

 Score = 39.2 bits (91), Expect = 8e-05
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           D DE++F+ GD       + +GW++ T  RTG  GM+  + +E
Sbjct: 13  DEDEVSFRDGDYIVNVQPIDEGWMYGTVQRTGRTGMLPANYIE 55

Nebulette is a cardiac-specific protein that localizes to the Z-disc. It interacts with tropomyosin and is important in stabilizing actin thin filaments in cardiac muscles. Polymorphisms in the nebulette gene are associated with dilated cardiomyopathy, with some mutations resulting in severe heart failure. Nebulette is a 107kD protein that contains an N-terminal acidic region, multiple nebulin repeats, and a C-terminal SH3 domain. LIM-nebulette, also called Lasp2 (LIM and SH3 domain protein 2), is an alternatively spliced variant of nebulette. Although it shares a gene with nebulette, Lasp2 is not transcribed from a muscle-specific promoter, giving rise to its multiple tissue expression pattern with highest amounts in the brain. It can crosslink actin filaments and it affects cell spreading. Lasp2 is a 34kD protein containing an N-terminal LIM domain, three nebulin repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212873 cd11940, SH3_ARHGEF5_19, Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF5 and ARHGEF19

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 149 DELTFQKGDIFFVHNELGDGWLWVTAHRTGEQG 181
           DELT +K DI  V  +  DGWL       GE+G
Sbjct: 14  DELTLEKADIIMVRQQSSDGWLEGVRLSDGERG 46

ARHGEF5, also called ephexin-3 or TIM (Transforming immortalized mammary oncogene), is a potent activator of RhoA and it plays roles in regulating cell shape, adhesion, and migration. It binds to the SH3 domain of Src and is involved in regulating Src-induced podosome formation. ARHGEF19, also called ephexin-2 or WGEF (weak-similarity GEF), is highly expressed in the intestine, liver, heart and kidney. It activates RhoA, Cdc42, and Rac 1, and has been shown to activate RhoA in the Wnt-PCP (planar cell polarity) pathway. It is involved in the regulation of cell polarity and cytoskeletal reorganization. ARHGEF5 and ARHGEF19 contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), and SH3 domains. The SH3 domains of ARHGEFs play an autoinhibitory role through intramolecular interactions with a proline-rich region N-terminal to the DH domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212704 cd11770, SH3_Nephrocystin, Src Homology 3 domain of Nephrocystin (or Nephrocystin-1)

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 10/35 (28%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 149 DELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            +L+F+KG++  + ++  DGW W+  +  G +G++
Sbjct: 14  GDLSFKKGEVLRIISKRADGW-WLAENSKGNRGLV 47

Nephrocystin contains an SH3 domain involved in signaling pathways that regulate cell adhesion and cytoskeletal organization. It is a protein that in humans is associated with juvenile nephronophthisis, an inherited kidney disease characterized by renal fibrosis that lead to chronic renal failure in children. It is localized in cell-cell junctions in renal duct cells, and is known to interact with Ack1, an activated Cdc42-associated kinase. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212757 cd11823, SH3_Nostrin, Src homology 3 domain of Nitric Oxide Synthase TRaffic INducer

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           R  A+  YT     DEL+ Q GDI  VH +  DGW W
Sbjct: 1   RCKALYSYTA-NREDELSLQPGDIIEVHEKQDDGW-W 35

Nostrin is expressed in endothelial and epithelial cells and is involved in the regulation, trafficking and targeting of endothelial NOS (eNOS). It facilitates the endocytosis of eNOS by coordinating the functions of dynamin and the Wiskott-Aldrich syndrome protein (WASP). Increased expression of Nostrin may be correlated to preeclampsia. Nostrin contains an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198211 cd10348, SH2_Cterm_shark_like, C-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLM--GGRTFECLDAVINRY 53
          SFLVR S   PG Y L     N +  F I+ +  ++     G  FE L+ +I  Y
Sbjct: 25 SFLVRYSRRRPGGYVLTLVYENHVYHFEIQNRDDKWFYIDDGPYFESLEHLIEHY 79

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in its carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 86

>gnl|CDD|212717 cd11783, SH3_SH3RF_3, Third Src Homology 3 domain of SH3 domain containing ring finger 1 (SH3RF1), SH3RF3, and similar domains

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
             VA+ PY K    DEL  +KG+++ V  +  DGW   T+ RTG+ G+
Sbjct: 1   IYVALYPY-KPQKPDELELRKGEMYTVTEKCQDGWFKGTSLRTGQSGV 47

SH3RF1 (or POSH) and SH3RF3 (or POSH2) are scaffold proteins that function as E3 ubiquitin-protein ligases. They contain an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle of SH3RF1 and SH3RF3, and similar domains. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212859 cd11926, SH3_SH3RF1_3, Third Src Homology 3 domain of SH3 domain containing ring finger 1, an E3 ubiquitin-protein ligase

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
           VAI PYT   + DEL  +KG++F V     DGW   T+  T + G+
Sbjct: 3   VAIYPYTPRKE-DELELRKGEMFLVFERCQDGWFKGTSMHTSKIGV 47

SH3RF1 is also called POSH (Plenty of SH3s) or SH3MD2 (SH3 multiple domains protein 2). It is a scaffold protein that acts as an E3 ubiquitin-protein ligase. It plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF1 also enhances the ubiquitination of ROMK1 potassium channel resulting in its increased endocytosis. It contains an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle, of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212789 cd11855, SH3_Sho1p, Src homology 3 domain of High osmolarity signaling protein Sho1p

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 138 AILPYTKMP-DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           A+ PY   P D +EL+F+KG+I  V +  G  W W      GE G+ 
Sbjct: 4   ALYPYDASPDDPNELSFEKGEILEVSDTSGK-W-WQARKSNGETGIC 48

Sho1p (or Sho1), also called SSU81 (Suppressor of SUA8-1 mutation), is a yeast membrane protein that regulates adaptation to high salt conditions by activating the HOG (high-osmolarity glycerol) pathway. High salt concentrations lead to the localization to the membrane of the MAPKK Pbs2, which is then activated by the MAPKK Ste11 and in turn, activates the MAPK Hog1. Pbs2 is localized to the membrane though the interaction of its PxxP motif with the SH3 domain of Sho1p. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|199828 cd09941, SH2_Grb2_like, Src homology 2 domain found in Growth factor receptor-bound protein 2 (Grb2) and similar proteins

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEK-KAVRYLMGGRTFECLDAVINRYRKEQI 58
          +FL+R S++SPGD+SL     N +Q F++ +  A +Y +    F  L+ +++ +R   +
Sbjct: 27 AFLIRESESSPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRTTSV 85

The adaptor proteins here include homologs Grb2 in humans, Sex muscle abnormal protein 5 (Sem-5) in Caenorhabditis elegans, and Downstream of receptor kinase (drk) in Drosophila melanogaster. They are composed of one SH2 and two SH3 domains. Grb2/Sem-5/drk regulates the Ras pathway by linking the tyrosine kinases to the Ras guanine nucleotide releasing protein Sos, which converts Ras to the active GTP-bound state. The SH2 domain of Grb2/Sem-5/drk binds class II phosphotyrosyl peptides while its SH3 domain binds to Sos and Sos-derived, proline-rich peptides. Besides it function in Ras signaling, Grb2 is also thought to play a role in apoptosis. Unlike most SH2 structures in which the peptide binds in an extended conformation (such that the +3 peptide residue occupies a hydrophobic pocket in the protein, conferring a modest degree of selectivity), Grb2 forms several hydrogen bonds via main chain atoms with the side chain of +2 Asn. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 95

>gnl|CDD|212811 cd11878, SH3_Bem1p_1, First Src Homology 3 domain of Bud emergence protein 1 and similar domains

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 150 ELTFQKGDIFFVHN-ELGDGWLWVTAHRTGEQGMI 183
           EL+F KGD F V   E    W   T   TG++G++
Sbjct: 15  ELSFSKGDFFHVIGEEDQGEWYEATNPVTGKRGLV 49

Members of this subfamily bear similarity to Saccharomyces cerevisiae Bem1p, containing two Src Homology 3 (SH3) domains at the N-terminus, a central PX domain, and a C-terminal PB1 domain. Bem1p is a scaffolding protein that is critical for proper Cdc42p activation during bud formation in yeast. During budding and mating, Bem1p migrates to the plasma membrane where it can serve as an adaptor for Cdc42p and some other proteins. Bem1p also functions as an effector of the G1 cyclin Cln3p and the cyclin-dependent kinase Cdc28p in promoting vacuolar fusion. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212905 cd11972, SH3_Abi2, Src homology 3 domain of Abl Interactor 2

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGW 169
           +++VAI  YTK  + DEL+FQ+G I +V  +  DGW
Sbjct: 3   EKVVAIYDYTKDKE-DELSFQEGAIIYVIKKNDDGW 37

Abi2 is highly expressed in the brain and eye. It regulates actin cytoskeletal reorganization at adherens junctions and dendritic spines, which is important in cell morphogenesis, migration, and cognitive function. Mice deficient with Abi2 show defects in orientation and migration of lens fibers, neuronal migration, dendritic spine morphology, as well as deficits in learning and memory. Abi proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	235
KOG1264|consensus	1267		99.96
KOG2996|consensus	865		99.91
KOG4792|consensus	293		99.9
KOG4226|consensus	379		99.84
KOG4278|consensus	1157		99.67
KOG3601|consensus	222		99.66
KOG4637|consensus	464		99.66
KOG4278|consensus	1157		99.64
KOG0790|consensus	600		99.54
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.52
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	99.51
KOG0197|consensus	468		99.49
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	99.45
KOG0197|consensus	468		99.42
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	99.41
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.37
KOG0790|consensus	600		99.36
KOG4226|consensus	379		99.34
KOG0194|consensus	474		99.26
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.24
KOG2199|consensus	462		99.21
KOG2996|consensus	865		99.21
KOG1118|consensus	366		99.17
KOG2070|consensus	661		99.16
KOG1029|consensus	1118		99.16
KOG3601|consensus	222		99.15
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	99.14
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	99.08
KOG1264|consensus	1267		99.02
KOG0162|consensus	1106		99.0
KOG4225|consensus	489		98.95
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	98.91
KOG1702|consensus	264		98.83
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	98.82
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	98.8
KOG4348|consensus	627		98.76
KOG4637|consensus	464		98.73
KOG4225|consensus	489		98.69
KOG2856|consensus	472		98.56
KOG2546|consensus	483		98.5
KOG4348|consensus	627		98.46
KOG3655|consensus	484		98.43
KOG1029|consensus	1118		98.42
KOG0515|consensus	752		98.38
KOG1843|consensus	473		98.27
KOG3875|consensus	362		98.26
KOG2222|consensus	848		98.02
KOG1930|consensus	483		97.87
KOG3523|consensus	695		97.77
KOG0609|consensus	542		97.74
KOG4773|consensus	386		97.61
KOG2528|consensus	490		97.37
KOG3632|consensus	1335		97.34
KOG4575|consensus	874		97.32
KOG3557|consensus	721		97.28
KOG4792|consensus	293		97.03
KOG1930|consensus	483		96.98
KOG3508|consensus	932		96.87
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	96.85
KOG1451|consensus	812		96.75
KOG3775|consensus	482		96.65
KOG3771|consensus	460		96.63
KOG0194|consensus	474		96.25
KOG4429|consensus	421		96.2
KOG3697|consensus	345		95.99
KOG3751|consensus	622		95.9
KOG3725|consensus	375		95.85
PF14603	89	hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.	95.32
KOG3751|consensus	622		95.23
KOG0199|consensus	1039		94.3
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	93.94
KOG3632|consensus	1335		93.26
smart00287	63	SH3b Bacterial SH3 domain homologues.	92.18
KOG3565|consensus	640		91.99
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	90.8
KOG3812|consensus	475		90.05
KOG1856|consensus	1299		89.52
PRK10884	206	SH3 domain-containing protein; Provisional	88.92
KOG1856|consensus	1299		88.6
KOG0040|consensus	2399		84.02
KOG4566|consensus	258		82.94

>KOG1264|consensus

Probab=99.96  E-value=2.2e-29  Score=219.66  Aligned_cols=190  Identities=29%  Similarity=0.452  Sum_probs=160.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEe-eCCe----EEcCCcccCCHHHHHHHhhhCCcc---cceeeCCccccC-
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEK-KAVR----YLMGGRTFECLDAVINRYRKEQIV---EGHTLGFPVTRI-   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~-~~~~----~~~~~~~F~sl~eLi~~y~~~~~~---~~~~L~~p~~~~-   71 (235)
                      +||||+|+...|+|+||++.+|+|.|+||.. .+++    |+.+...|+||-+||.||+++.+.   ....|..|||++ 
T Consensus       564 tFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m~LtePvPqp~  643 (1267)
T KOG1264|consen  564 TFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEMRLTEPVPQPN  643 (1267)
T ss_pred             cEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccceEEEecCCCCCCC
Confidence            6999999999999999999999999999964 3333    589999999999999999998874   467999999987 


Q ss_pred             -------------------------CCceeecc------------------eEEEEEeecCeeEeeeEEEcchhhhhhcc
Q psy13524         72 -------------------------NLGIFIPS------------------AIFRVTAVCGDFYIGGRQFDSLSDLISYY  108 (235)
Q Consensus        72 -------------------------~~~~~l~~------------------~~~~l~~~~g~~~~g~~~f~~l~~lv~~~  108 (235)
                                               .||.+|.+                  +|++|.+....+.+|...|++|.+||+||
T Consensus       644 ~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~FesLv~lv~yY  723 (1267)
T KOG1264|consen  644 PHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTSAFESLVELVSYY  723 (1267)
T ss_pred             cccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccHHHHHHHHHHHHH
Confidence                                     45555543                  89999998888889977799999999999


Q ss_pred             ccCCchhhcccccCCCCCC---------------------------CCCCCccEEEEeeccCCCCCCCCcccCCCCEEEE
Q psy13524        109 SSCSDLLKRERLAHPCPPP---------------------------EPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFV  161 (235)
Q Consensus       109 ~~~~~~~~~~~~~~p~~~~---------------------------~~~~~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v  161 (235)
                      .+.+.... .++..|+.+.                           .+..+...++|+|+|.| ..++||+|.+|.+|++
T Consensus       724 ~k~~lyR~-mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka-~r~DELSFpk~aiItn  801 (1267)
T KOG1264|consen  724 EKHPLYRK-MKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKA-KRSDELSFPKGAIITN  801 (1267)
T ss_pred             hcChhhhc-ccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhcccc-CCcccccccccceeEe
Confidence            98766554 8888887520                           01113356899999999 8999999999999999


Q ss_pred             eeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        162 HNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       162 ~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      +.+..+|| |.|...+...+|||+|||+.+..
T Consensus       802 v~keeg~w-WrGdYGg~iq~wfPsnyVeei~~  832 (1267)
T KOG1264|consen  802 VSKEEGGW-WRGDYGGRIQQWFPSNYVEEIST  832 (1267)
T ss_pred             eeccCCce-eecccccceeeeccHHHhhhhcc
Confidence            99999999 99999666789999999998753

>KOG2996|consensus

Probab=99.91  E-value=1.5e-24  Score=184.02  Aligned_cols=147  Identities=20%  Similarity=0.374  Sum_probs=114.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCccc-----ceeeCCccccCCCc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVE-----GHTLGFPVTRINLG   74 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~-----~~~L~~p~~~~~~~   74 (235)
                      +||||.+....++|+||+++++.|+|++|...++. ++.+.+.|+|+.|||+||+.+++..     .+.|+.|...+   
T Consensus       708 T~LVR~r~kea~e~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~ELVeyYq~~sLke~Fk~LDTtLk~Pyke~---  784 (865)
T KOG2996|consen  708 TYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVELVEYYQSHSLKEIFKALDTTLKFPYKEP---  784 (865)
T ss_pred             eEEEEecccchhheeEEEEeccccceEEEEecCCeEEechhhhhhhHHHHHHHHHhccHHHHHHHhhhhhcCCCcCh---
Confidence            69999998888899999999999999999988777 5999999999999999999999854     45666665420   


Q ss_pred             eeecceEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeeccCCCCCCCCcccC
Q psy13524         75 IFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQ  154 (235)
Q Consensus        75 ~~l~~~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~~~eL~~~  154 (235)
                                  +...+..|                          ..+.+..........++|.|||.+ .+..+|+|+
T Consensus       785 ------------e~sa~~~~--------------------------~~~~~sv~s~~~~g~AvarYdf~a-rd~~eLSlk  825 (865)
T KOG2996|consen  785 ------------EHSAGQRG--------------------------NRAGNSVLSPKVVGTAVARYDFCA-RDMRELSLK  825 (865)
T ss_pred             ------------hhhhhhcc--------------------------ccccccccCcceeeeeeeccccCC-Cchhhcccc
Confidence                        00000000                          001111111123457889999999 788999999


Q ss_pred             CCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        155 KGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       155 ~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      .||++.++.+.  |.|| |.|.. +|+.||||++||++-
T Consensus       826 ~GDvV~i~~k~g~d~GW-WkGev-ngrvGwFPstYVee~  862 (865)
T KOG2996|consen  826 EGDVVKIYDKVGEDQGW-WKGEV-NGRVGWFPSTYVEED  862 (865)
T ss_pred             cCCEEEEehhccccCce-eccee-cCccccccccccccc
Confidence            99999999876  6899 99999 999999999999864

>KOG4792|consensus

Probab=99.90  E-value=6.7e-24  Score=160.83  Aligned_cols=140  Identities=27%  Similarity=0.493  Sum_probs=112.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeC-----C---eEEcCCcccCCHHHHHHHhhhCCcccceeeCCccccCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-----V---RYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRIN   72 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~-----~---~~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~~   72 (235)
                      .||||+|++.||+|+|||+.+.+|.||.|++..     .   +|.++.+.|++|+.|.+||+-+.+ ..+.|+.|.+|..
T Consensus        34 ~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIgdQ~Fd~lPaLL~fykihyL-dtttLi~p~~r~~  112 (293)
T KOG4792|consen   34 VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIGDQEFDSLPALLEFYKIHYL-DTTTLIEPAKRSR  112 (293)
T ss_pred             eEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeeccccccchHHHHhheeEeee-ccccccccccccc
Confidence            499999999999999999999999999998721     1   377888999999999999988763 4456677766510


Q ss_pred             CceeecceEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeeccCCCCCCCCcc
Q psy13524         73 LGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELT  152 (235)
Q Consensus        73 ~~~~l~~~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~~~eL~  152 (235)
                                     .                          ..+.        ....+....++|+|+|.+ ++..+|.
T Consensus       113 ---------------~--------------------------~~~~--------~~~~~~~~~vr~~fdF~G-~deeDLP  142 (293)
T KOG4792|consen  113 ---------------Q--------------------------GSGV--------ILRQEEAEYVRALFDFNG-NDEEDLP  142 (293)
T ss_pred             ---------------c--------------------------ccCc--------ccchhhhhheeeeeccCC-CccccCC
Confidence                           0                          0000        001124467889999999 8999999


Q ss_pred             cCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        153 FQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       153 ~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      |++||++.|+++.+..| |.++++.|+.|++|.+||+...
T Consensus       143 FkkGeiL~I~~K~eeqW-W~Arns~Gk~GmIPvpYVe~~~  181 (293)
T KOG4792|consen  143 FKKGEILRIRDKPEEQW-WNARNSEGKRGMIPVPYVEKYR  181 (293)
T ss_pred             cccCcEEEEecCcHHHh-hhhhccCCcccceechHHHhhh
Confidence            99999999999999999 9999999999999999998764

>KOG4226|consensus

Probab=99.84  E-value=2.8e-21  Score=150.53  Aligned_cols=100  Identities=24%  Similarity=0.470  Sum_probs=87.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEeccCCC----------CC--
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLDETI----------DP--  197 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~----------~p--  197 (235)
                      ....++|+|+|.+ ..+.||+|.+||.+.|+++.  |++| |.++..+|+.|++|.||++.+.+..          .|  
T Consensus       190 vl~vVvaLYsFss-sndeELsFeKGerleivd~Pe~DPdW-wkarn~~G~vGLVPrNYv~vl~d~~~ts~~~~~s~~pq~  267 (379)
T KOG4226|consen  190 VLHVVVALYSFSS-SNDEELSFEKGERLEIVDKPENDPDW-WKARNARGQVGLVPRNYVVVLSDGPSTSKALHPSHAPQI  267 (379)
T ss_pred             EEEEEEEEecccC-CChhhcccccCceeEeccCCCCCchH-HhhcccCCccceeecceEEEeccCccccccCCccccccc
Confidence            3456899999999 78899999999999999976  7889 9999999999999999999875321          11  


Q ss_pred             ----------CCcCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        198 ----------NTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       198 ----------~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                                ....+||+|+|||.+||.+|..+| +|.||||+|+|+
T Consensus       268 sgn~p~~sg~~ag~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsn  314 (379)
T KOG4226|consen  268 SGNGPSSSGRFAGRPWYYGNITRHQAECALNEHGHEGDFLIRDSESN  314 (379)
T ss_pred             cCCCCCccccccCCcceeccccHHHHHHHHhccCccCceEEecCCCC
Confidence                      235799999999999999999999 999999999986

>KOG4278|consensus

Probab=99.67  E-value=1.5e-16  Score=138.03  Aligned_cols=96  Identities=22%  Similarity=0.294  Sum_probs=89.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe--EEcCCcccCCHHHHHHHhhhCCcccceeeCCccccC-------
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI-------   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~--~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~-------   71 (235)
                      +||||+|++.+|+|+||+++.+.|.||||+...++  |+.....|.+|.|||+||....+|+.+.|.+|.++.       
T Consensus       175 SFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~nKptvyg  254 (1157)
T KOG4278|consen  175 SFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKKNKPTVYG  254 (1157)
T ss_pred             ceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEeehhhhhHHHHHHhhccccccceeEeeeccCccCCCCceee
Confidence            69999999999999999999999999999987766  898899999999999999999999999999998875       


Q ss_pred             ----CCceeecceEEEEEeecCeeEeeeE
Q psy13524         72 ----NLGIFIPSAIFRVTAVCGDFYIGGR   96 (235)
Q Consensus        72 ----~~~~~l~~~~~~l~~~~g~~~~g~~   96 (235)
                          .|+|++.+.++.+..+.|.|++|++
T Consensus       255 vSPn~DkWEmeRtdItMkhKLGGGQYGeV  283 (1157)
T KOG4278|consen  255 VSPNADKWEMERTDITMKHKLGGGQYGEV  283 (1157)
T ss_pred             ecCCcchhhccchheeeeeccCCCcccce
Confidence                7999999999999999888887755

>KOG3601|consensus

Probab=99.66  E-value=2.2e-17  Score=124.63  Aligned_cols=137  Identities=22%  Similarity=0.426  Sum_probs=103.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcccceeeCCccccCCCceeecc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPS   79 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~~~~~~l~~   79 (235)
                      +||+|.+++.||+|++|++..+.|.|+++.+...+ |.....+|.|+.+|++||+.+....+....              
T Consensus        81 ~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s~~r~~qi~--------------  146 (222)
T KOG3601|consen   81 DFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTASQSRNQQIF--------------  146 (222)
T ss_pred             hhhhhhhhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCcccccccceeee--------------
Confidence            48999999999999999999999999999876544 777777788887888877776532211000              


Q ss_pred             eEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeeccCCCCCCCCcccCCCCEE
Q psy13524         80 AIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIF  159 (235)
Q Consensus        80 ~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~~~eL~~~~gd~i  159 (235)
                                               +..+         ...-.|.+++   .....+.|+|+|.+ ..+.+|.|++||++
T Consensus       147 -------------------------l~d~---------~~~~~~~~~~---~~~~yqQa~~df~~-~pp~ql~f~~gq~~  188 (222)
T KOG3601|consen  147 -------------------------LRDM---------EPPPAPLPPA---PTNYYQQALYDFQP-QPPGQLAFRRGQQI  188 (222)
T ss_pred             -------------------------eccc---------ccccccCCCC---ccchhhhhcCCCCC-CCchhhccccCCcc
Confidence                                     0000         0000112211   13467889999999 89999999999999


Q ss_pred             EEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        160 FVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       160 ~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      .|++..+..| |.|+. .|+.|+||++||.+.
T Consensus       189 ~v~~~ss~~w-w~Gs~-lg~agiFpagyv~p~  218 (222)
T KOG3601|consen  189 QVLDSSSPFW-WFGSK-LGRAGIFPAGYVAPS  218 (222)
T ss_pred             eeecCCCcch-hhccc-cCceeeecCcccccc
Confidence            9999999999 99999 999999999999765

>KOG4637|consensus

Probab=99.66  E-value=1.2e-19  Score=146.71  Aligned_cols=71  Identities=31%  Similarity=0.512  Sum_probs=64.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc-----ccceeeCCccccC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVTRI   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~~~   71 (235)
                      +||||+..+-+|+|+|+++.+++++-++|...++.| +.+.-+|+|+++||+||+.+++     .+.++|.+|+.+.
T Consensus        46 sFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgKyGF~d~ltf~SVVelIn~yr~~SL~~yN~~LDvrLlyPVs~~  122 (464)
T KOG4637|consen   46 SFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGKYGFSDPLTFNSVVELINHYRNESLAQYNPKLDVRLLYPVSRY  122 (464)
T ss_pred             cEEeeccccCCCceEEEEecCCccceeeeEEecCccCCCCchhhHHHHHHHHHHhhhHHHhhCcccceeeechHHHh
Confidence            699999887899999999999999999999888877 7788999999999999999886     4688999999876

>KOG4278|consensus

Probab=99.64  E-value=3.6e-16  Score=135.62  Aligned_cols=95  Identities=20%  Similarity=0.405  Sum_probs=82.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCC-eeEEEecCCCceeEEeCCcEEeccCCCCCCCcCccccCCCCh
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDG-WLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTK  210 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~-w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r  210 (235)
                      ..+.++|+|||.+ .++..|++.+||.++|+....+| | -.++..+|+ ||+|+||+.++.    .++...||||.++|
T Consensus        89 dpNLFVALYDFva-sGdntLSitKGeklRvLGYN~NgEW-cEartKNGq-GWVPSNyItPvN----SLeKhsWYHGpvSR  161 (1157)
T KOG4278|consen   89 DPNLFVALYDFVA-SGDNTLSITKGEKLRVLGYNKNGEW-CEARTKNGQ-GWVPSNYITPVN----SLEKHSWYHGPVSR  161 (1157)
T ss_pred             CCceeEeeeeeec-cccceeeeecCceEEEeeecCCCcc-eeecccCCC-cccccccccccc----chhhcccccCcccc
Confidence            3468999999999 88999999999999999987555 5 566665777 999999998864    36778999999999


Q ss_pred             HHHHHhhccCCCeeEEeeccCCC
Q psy13524        211 NDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       211 ~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ..||-+|...-+|+||||+|+|+
T Consensus       162 saaEy~LsSgInGSFLVRESEsS  184 (1157)
T KOG4278|consen  162 SAAEYILSSGINGSFLVRESESS  184 (1157)
T ss_pred             chhhhhhhcCcccceEEeeccCC
Confidence            99999999888999999999986

>KOG0790|consensus

Probab=99.54  E-value=3.3e-14  Score=118.30  Aligned_cols=116  Identities=28%  Similarity=0.542  Sum_probs=97.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCC------cccceeeCCccccC--
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQ------IVEGHTLGFPVTRI--   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~------~~~~~~L~~p~~~~--   71 (235)
                      +||.|.|++.||+|+|+++.+++|.|++|...++.| +.++.+|.+++|||+||+++.      .+....|++|+.-.  
T Consensus        28 sfl~r~s~sNp~~fsl~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyyme~~~~lkekng~~ielK~pl~cAdp  107 (600)
T KOG0790|consen   28 SFLARPSESNPGDFSLSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADP  107 (600)
T ss_pred             chhhccccCCCcceeEEEEeCCceEEEEEeecCccccccCCccccchHHHHHHHHhhhHHHHhcCCCEEEecCCCccCCc
Confidence            599999999999999999999999999999888888 899999999999999998855      46678888885422  


Q ss_pred             -----------------------------------CCceeec----------------ceEEEEEeecCeeEee-eEEEc
Q psy13524         72 -----------------------------------NLGIFIP----------------SAIFRVTAVCGDFYIG-GRQFD   99 (235)
Q Consensus        72 -----------------------------------~~~~~l~----------------~~~~~l~~~~g~~~~g-~~~f~   99 (235)
                                                         .+|-++.                ..|++|..+.|.+.+| +..|+
T Consensus       108 tserWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F~  187 (600)
T KOG0790|consen  108 TSERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERFD  187 (600)
T ss_pred             hhhhhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCCccccc
Confidence                                               1222221                1799999999999999 88999


Q ss_pred             chhhhhhccccCCchhh
Q psy13524        100 SLSDLISYYSSCSDLLK  116 (235)
Q Consensus       100 ~l~~lv~~~~~~~~~~~  116 (235)
                      ++.+|+++|++++....
T Consensus       188 sltdLidhykknpmvEt  204 (600)
T KOG0790|consen  188 SLTDLVEHYKKNPMVET  204 (600)
T ss_pred             hHHHHHHHhccCchhhh
Confidence            99999999999775443

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.52  E-value=2.8e-14  Score=85.42  Aligned_cols=49  Identities=41%  Similarity=0.813  Sum_probs=44.2

Q ss_pred             EeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEE
Q psy13524        138 AILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       138 a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      |+|+|.+ ..++||+|++||+|.|+.+.+++| |.++. +|+.|+||++||+
T Consensus         1 Al~~y~~-~~~dELs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yV~   49 (49)
T PF14604_consen    1 ALYDYEA-QDPDELSFKKGDVITVLEKSDDGW-WYGRN-TGRTGLFPANYVE   49 (49)
T ss_dssp             ESSCBCS-SSTTB-EB-TTEEEEEEEESSTSE-EEEEE-TTEEEEEEGGGEE
T ss_pred             CCccCCC-CCcCEeeEcCCCEEEEEEeCCCCE-EEEEE-CCEEEEECHHhCC
Confidence            6899999 889999999999999999989999 88888 9999999999985

...

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=99.51  E-value=1e-13  Score=95.17  Aligned_cols=68  Identities=40%  Similarity=0.752  Sum_probs=59.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-Ec-CCcccCCHHHHHHHhhhCC--cccceeeCCcc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LM-GGRTFECLDAVINRYRKEQ--IVEGHTLGFPV   68 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~-~~~~F~sl~eLi~~y~~~~--~~~~~~L~~p~   68 (235)
                      +||||.|.+.+|.|+||++.++.|+|++|.+..+++ +. ....|+||.|||+||+.++  .+..+.|..|+
T Consensus        23 ~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~~~~~~~~~~~L~~p~   94 (94)
T cd00173          23 TFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQKNPLSDGLGVKLRYPV   94 (94)
T ss_pred             eEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhhCccCCCcccEeCCcC
Confidence            699999998899999999999999999999888773 43 3889999999999999998  56778888775

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>KOG0197|consensus

Probab=99.49  E-value=8.9e-15  Score=124.70  Aligned_cols=100  Identities=24%  Similarity=0.333  Sum_probs=89.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECC------EEeEEEEEeeCCe--E--EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINN------QIQRFRIEKKAVR--Y--LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~------~v~h~~I~~~~~~--~--~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|+|+|||+...      .|+||+|...+++  +  +.....|+++.+||+||+.+..++++.|..||..
T Consensus       106 ~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~~lv~~~~~~~~gl~~~l~~p~~~  185 (468)
T KOG0197|consen  106 AFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSSLQQLVNYYSKNADGLCTRLRDPCSK  185 (468)
T ss_pred             ceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHHhhhhHHHHHhhhhccCcchhhcccCchhc
Confidence            6999999999999999999866      8999999887765  4  6777899999999999999999999999999865


Q ss_pred             C-----------CCceeecceEEEEEeecCeeEeeeEEEcc
Q psy13524         71 I-----------NLGIFIPSAIFRVTAVCGDFYIGGRQFDS  100 (235)
Q Consensus        71 ~-----------~~~~~l~~~~~~l~~~~g~~~~g~~~f~~  100 (235)
                      .           .+.|++++.++++.+++|+|.||.+....
T Consensus       186 ~~~~~p~~~~~~~d~wei~r~~l~l~~~LG~G~FG~V~~g~  226 (468)
T KOG0197|consen  186 QGHTKPQTPDLARDPWEIPREELKLIRELGSGQFGEVWLGK  226 (468)
T ss_pred             cCCCCCCCCccccCCeeecHHHHHHHHHhcCCccceEEEEE
Confidence            1           68999999999999999999999775443

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=99.45  E-value=3.2e-13  Score=89.24  Aligned_cols=53  Identities=36%  Similarity=0.797  Sum_probs=49.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHh
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRY   53 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y   53 (235)
                      +||||.|.+.+|.|+|||+.+++|+|++|.+.+++ | +.++..|+||.+||+||
T Consensus        23 ~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y   77 (77)
T PF00017_consen   23 TFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY   77 (77)
T ss_dssp             EEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred             eEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence            59999999989999999999999999999998887 5 66778999999999998

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>KOG0197|consensus

Probab=99.42  E-value=1.9e-13  Score=116.60  Aligned_cols=99  Identities=22%  Similarity=0.448  Sum_probs=82.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCE-EEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccC--CCCCCCcCccccCCC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDI-FFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDE--TIDPNTVFDWFHPEC  208 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~-i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~--~~~p~~~~~w~~~~~  208 (235)
                      ...+.|+|+|.+ ..+.+|+|.+||. ..+++..+..| |.++.. .+..|++|.|||.....  .-..++..+||++.|
T Consensus        11 ~~~~valyd~~s-~~~~dLsf~~Gd~~~~~~~~~~~~W-w~ar~~~~~~~g~ip~N~v~~~~~~~~~~~l~~~~Wf~~~i   88 (468)
T KOG0197|consen   11 ETIVVALYDYAS-RTPEDLSFRKGDVVLILLETTNGDW-WRARSLQLGQEGYIPSNYVARNRGSPAFIKLSDEPWFFGKI   88 (468)
T ss_pred             cceEEEeccccC-CCccccccccCceEEEeeccCChhH-HHHHHhhcCCCCcCcCceeeccccCCCccccccCCchhccc
Confidence            457899999999 7899999999999 88888888999 877655 78899999999987521  112355789999999


Q ss_pred             ChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        209 TKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       209 ~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      +|++||+.|....  .|+||||+|++.
T Consensus        89 sR~~ae~~ll~p~~~~G~flvR~se~~  115 (468)
T KOG0197|consen   89 SREEAERQLLAPENKEGAFLVRESESD  115 (468)
T ss_pred             cHHHHHHhhcCCCCCccceeeecccCC
Confidence            9999997666655  599999999764

>smart00252 SH2 Src homology 2 domains

Probab=99.41  E-value=1.4e-12  Score=87.60  Aligned_cols=58  Identities=34%  Similarity=0.779  Sum_probs=51.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC-eE-EcCCcccCCHHHHHHHhhhCCc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RY-LMGGRTFECLDAVINRYRKEQI   58 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~-~~-~~~~~~F~sl~eLi~~y~~~~~   58 (235)
                      +||||.|.+.+|.|+||++.++.|+||+|...++ .| +.+...|+||.|||+||+.+++
T Consensus        24 ~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~~~~~   83 (84)
T smart00252       24 DFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQKNSL   83 (84)
T ss_pred             EEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHhhCCC
Confidence            6999999988899999999999999999998774 46 5556899999999999998764

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.37  E-value=1.4e-12  Score=80.27  Aligned_cols=53  Identities=38%  Similarity=0.723  Sum_probs=47.2

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEe-eccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVH-NELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~-~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      .++|+++|.+ ..+++|+|++||+|.|+ +..+++| |.++. +|+.|+||++||++
T Consensus         1 ~~~a~~d~~~-~~~~~Ls~~~Gd~i~v~~~~~~~~w-w~~~~-~g~~G~~P~~~v~~   54 (55)
T PF07653_consen    1 YYRAIFDYVA-EDPDELSFKKGDVIEVLGEKDDDGW-WLGEN-NGRRGWFPSSYVEE   54 (55)
T ss_dssp             EEEESSSBES-SSTTB-EB-TTEEEEEEEEECSTSE-EEEEE-TTEEEEEEGGGEEE
T ss_pred             CEEEeEEECC-CCCCceEEecCCEEEEEEeecCCCE-EEEEE-CCcEEEEcHHHEEE
Confidence            4789999999 89999999999999999 7778899 99998 99999999999986

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>KOG0790|consensus

Probab=99.36  E-value=1.5e-12  Score=108.54  Aligned_cols=71  Identities=31%  Similarity=0.586  Sum_probs=63.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECC---------EEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCccc----ceeeCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINN---------QIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIVE----GHTLGF   66 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~---------~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~~~----~~~L~~   66 (235)
                      +||||+|.+.||+|+|||+.++         +|.|+.|..++..| +.++..|.|+.+||+||+++++..    .+.|..
T Consensus       134 sfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F~sltdLidhykknpmvEt~gtvv~Lrq  213 (600)
T KOG0790|consen  134 SFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVVYLRQ  213 (600)
T ss_pred             cEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCCccccchHHHHHHHhccCchhhhcceeEEeec
Confidence            6999999999999999999976         89999999998889 667789999999999999999754    568888


Q ss_pred             ccccC
Q psy13524         67 PVTRI   71 (235)
Q Consensus        67 p~~~~   71 (235)
                      |+...
T Consensus       214 P~naT  218 (600)
T KOG0790|consen  214 PLNAT  218 (600)
T ss_pred             ccccc
Confidence            97653

>KOG4226|consensus

Probab=99.34  E-value=2.6e-12  Score=100.80  Aligned_cols=69  Identities=28%  Similarity=0.547  Sum_probs=62.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCc-----ccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~   69 (235)
                      .||||+|++.||+|++|++..++.+||+|+..++-|.++.++|-+|.+||+||++.++     +....|.++++
T Consensus       305 dFLiRDSEsnpgD~SvSlka~grNKHFkVq~~d~~ycIGqRkF~tmd~Lv~HY~kaPIfts~qgEKLyLvr~Lp  378 (379)
T KOG4226|consen  305 DFLIRDSESNPGDFSVSLKASGRNKHFKVQLVDNVYCIGQRKFHTMDELVEHYKKAPIFTSEQGEKLYLVRALP  378 (379)
T ss_pred             ceEEecCCCCCcceeEEeeccCCCcceEEEEecceEEeccceeccHHHHHHhhhcCCceecCCCceEEEeccCC
Confidence            4999999999999999999999999999998888899999999999999999999776     45667777765

>KOG0194|consensus

Probab=99.26  E-value=2.4e-11  Score=105.07  Aligned_cols=99  Identities=20%  Similarity=0.345  Sum_probs=85.2

Q ss_pred             CeEEeecCCCCCC---E-EEEEEEC--CEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcc---cceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGD---Y-SLFFHIN--NQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIV---EGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~---~-~lsv~~~--~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~---~~~~L~~p~~~   70 (235)
                      .||||.|+..+|.   + +|||.+.  ..++||.|.+.++. |......|++|.+||.||+.+...   ....|+.|+++
T Consensus        70 DfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~li~~~~~~~~~~~~~~~~L~~PI~r  149 (474)
T KOG0194|consen   70 DFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISELVNYYKFSKLEITGKNFFLKRPIPR  149 (474)
T ss_pred             ceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHHHHHHHhcccceeccceeecccccc
Confidence            5999999987663   3 9999996  78999999998887 467779999999999999987764   45679999998


Q ss_pred             CCCceeecceEEEEEeecCeeEeeeEEEcch
Q psy13524         71 INLGIFIPSAIFRVTAVCGDFYIGGRQFDSL  101 (235)
Q Consensus        71 ~~~~~~l~~~~~~l~~~~g~~~~g~~~f~~l  101 (235)
                        +.|+|.|.++.+.+..|+|.||++....+
T Consensus       150 --~~Wel~H~~v~l~kkLGeGaFGeV~~G~l  178 (474)
T KOG0194|consen  150 --QKWELSHSDIELGKKLGEGAFGEVFKGKL  178 (474)
T ss_pred             --cccEEeccCccccceeecccccEEEEEEE
Confidence              88999999999999999999998866654

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.24  E-value=1.8e-11  Score=73.08  Aligned_cols=47  Identities=38%  Similarity=0.757  Sum_probs=41.6

Q ss_pred             EEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeC
Q psy13524        137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFR  185 (235)
Q Consensus       137 ~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~  185 (235)
                      +|+|+|.+ ..+++|+|++||.|.|+++.+++| |.++.. +++.|+||+
T Consensus         1 ~Alydf~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYDFDA-EDPDELSFKKGDIIEVLEKSDDGW-WKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSCBET-SSTTBSEB-TTEEEEEEEESSSSE-EEEEETTTTEEEEEEG
T ss_pred             CCCeeeCC-CCCCEEeEECCCEEEEEEecCCCE-EEEEECCCCcEEEeeC
Confidence            68999999 889999999999999999999999 888765 479999995

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG2199|consensus

Probab=99.21  E-value=2.9e-12  Score=105.37  Aligned_cols=58  Identities=21%  Similarity=0.461  Sum_probs=53.4

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...+++|+|||++ .+++||+|++||+|+|++..+.+| |.|.+ .+..|+||+|||...-
T Consensus       214 ~~rkVRALYDFeA-aE~nELsFkaGdIItVLd~s~~~W-WKG~~-~~~~GlFPsnfVT~~l  271 (462)
T KOG2199|consen  214 VVRKVRALYDFEA-AEDNELSFKAGDIITVLDDSDPNW-WKGEN-HRGIGLFPSNFVTADL  271 (462)
T ss_pred             cchhhhhhhcccc-cCCCccceecCcEEEEcccCCcch-hcccc-CCcccccchhhhhhhh
Confidence            4578999999999 899999999999999999999999 99999 7789999999998653

>KOG2996|consensus

Probab=99.21  E-value=7.2e-12  Score=107.55  Aligned_cols=80  Identities=19%  Similarity=0.349  Sum_probs=67.0

Q ss_pred             CcccCCCCEEEEeecc-CCCeeEEEecC-CCceeEEeCCcEEeccCCC-----CCCC--cCccccCCCChHHHHHhhccC
Q psy13524        150 ELTFQKGDIFFVHNEL-GDGWLWVTAHR-TGEQGMIFRDLVEDLDETI-----DPNT--VFDWFHPECTKNDAVDMLVKA  220 (235)
Q Consensus       150 eL~~~~gd~i~v~~~~-~~~w~w~~~~~-~~~~G~~P~~~v~~~~~~~-----~p~~--~~~w~~~~~~r~~ae~~l~~~  220 (235)
                      .|.++.||++.++..+ .+.| |.++.. .+.+|+||++-|.+.....     .|.+  ..+||.|+|.|++||.+|+++
T Consensus       626 ~l~~~~gdvlel~~~d~~s~~-w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~~~WyaG~MERaqaes~Lk~~  704 (865)
T KOG2996|consen  626 RLVLQEGDVLELLKGDAESSW-WEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSEFPWYAGEMERAQAESTLKNR  704 (865)
T ss_pred             ceEecCCceeehhcCCCCCcc-cccCCccCCccCCCCccccCcCCCCCCCCCCCccchhhhhhhcchHhhhhhhhHhhcC
Confidence            5899999999998766 4568 988865 6779999999998765321     1333  789999999999999999999


Q ss_pred             CCeeEEeecc
Q psy13524        221 GPVNFTISES  230 (235)
Q Consensus       221 ~~g~fliR~s  230 (235)
                      ++||||||.+
T Consensus       705 ~ngT~LVR~r  714 (865)
T KOG2996|consen  705 PNGTYLVRYR  714 (865)
T ss_pred             CCceEEEEec
Confidence            9999999987

>KOG1118|consensus

Probab=99.17  E-value=2e-11  Score=97.28  Aligned_cols=58  Identities=28%  Similarity=0.539  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|||.+ +.++||.|+.||+|.|+...|.+| |.|.. .|.+|+||.|||+++.
T Consensus       305 ~~p~cralYdFep-enEgEL~fkeGDlI~l~~QIdenW-yeG~~-~g~sG~FPvnYv~vlv  362 (366)
T KOG1118|consen  305 DQPCCRALYDFEP-ENEGELDFKEGDLITLTNQIDENW-YEGEK-HGESGMFPVNYVEVLV  362 (366)
T ss_pred             cchhheeeeccCC-CCCCccCcccCceeeehhhcCcch-hhhee-cCccCccccceeEEec
Confidence            3467899999999 899999999999999999999999 99998 8999999999999874

>KOG2070|consensus

Probab=99.16  E-value=1.6e-11  Score=103.46  Aligned_cols=57  Identities=26%  Similarity=0.547  Sum_probs=53.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      .-.++|.|.|.+ .+.+||+|.+||+|+|+...++|| |.|.+ +|++||||+|||-.+.
T Consensus        17 pLvvrAkf~F~g-sNnDELsf~KgDvItVTq~eeGGW-WEGTl-ng~TGWFPsnYV~eik   73 (661)
T KOG2070|consen   17 PLVVRAKFNFQG-SNNDELSFSKGDVITVTQVEEGGW-WEGTL-NGRTGWFPSNYVREIK   73 (661)
T ss_pred             ceEEEEEeeccc-CCCceeccccCCEEEEEEeccCcc-eeccc-cCccCccchHHHHHHh
Confidence            356899999999 899999999999999999999999 99999 9999999999998764

>KOG1029|consensus

Probab=99.16  E-value=1.4e-11  Score=108.67  Aligned_cols=62  Identities=31%  Similarity=0.599  Sum_probs=56.7

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccCCCCC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDP  197 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p  197 (235)
                      ...+.|+|||.+ +.++||+|.+||+|.|+.++++.| |.|.. +|.+|+||+|||.+...+.+|
T Consensus      1053 v~qviamYdY~A-qndDELsF~kgdiI~VlnkdepeW-W~Ge~-ng~sGLFPSNYV~k~ttd~dp 1114 (1118)
T KOG1029|consen 1053 VCQVIAMYDYEA-QNDDELSFKKGDIINVLNKDEPEW-WSGER-NGKSGLFPSNYVQKQTTDGDP 1114 (1118)
T ss_pred             cceeEEeecccc-CCcccccccCCCEEEecCCCChhh-hcccc-cCccccCccccccccccCCCh
Confidence            367889999999 899999999999999999999999 99999 999999999999887766555

>KOG3601|consensus

Probab=99.15  E-value=3.7e-12  Score=96.52  Aligned_cols=87  Identities=28%  Similarity=0.418  Sum_probs=74.6

Q ss_pred             EEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEeccCCCCCCCcCccccCCCChHHHH
Q psy13524        136 IVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAV  214 (235)
Q Consensus       136 ~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~ae  214 (235)
                      +.++++|.+ ...+||+|.+||.+.++...| .+| ....+ .|..|++|.|+..     +.+   .+||++.++|..||
T Consensus         3 a~a~n~f~a-~i~dELsFlkg~~lk~l~~~d~~nw-~~ael-~g~~g~~P~Nai~-----~~~---~~wve~~i~r~~ae   71 (222)
T KOG3601|consen    3 AVAKNDFLA-GIRDELSFLKGDNLKILNMEDDINW-YKAEL-DGPEGFIPKNAIR-----MKP---HEWVEGLIPRPLAE   71 (222)
T ss_pred             hhhhhhhhh-cCcccceeecCCceEecchHHhhhh-hhHhh-cCccccCcccccc-----ccc---ccceecccccchhh
Confidence            457889999 789999999999999988764 467 66666 9999999999874     222   68999999999999


Q ss_pred             HhhccCCCeeEEeeccCCC
Q psy13524        215 DMLVKAGPVNFTISESDST  233 (235)
Q Consensus       215 ~~l~~~~~g~fliR~s~~~  233 (235)
                      ++|+++-+|.||||.++|+
T Consensus        72 ~~l~~~~~G~fl~r~s~sS   90 (222)
T KOG3601|consen   72 DLLSKKRDGDFLIRLSESS   90 (222)
T ss_pred             hhhhccCcchhhhhhhhcC
Confidence            9999988999999988875

>smart00326 SH3 Src homology 3 domains

Probab=99.14  E-value=2.2e-10  Score=70.84  Aligned_cols=55  Identities=38%  Similarity=0.747  Sum_probs=49.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ..++|+++|.+ ..+++|+|.+||.|.+++..+++| |.++..+++.|+||.+|++.
T Consensus         3 ~~~~a~~~~~~-~~~~~l~~~~Gd~v~v~~~~~~~w-~~~~~~~~~~G~vP~~~v~~   57 (58)
T smart00326        3 PQVRALYDYTA-QDPDELSFKKGDIITVLEKSDDGW-WKGRLGRGKEGLFPSNYVEE   57 (58)
T ss_pred             cEEEEeeeeCC-CCCCCCCCCCCCEEEEEEcCCCCe-EEEEeCCCCEEEEchHHEEE
Confidence            46789999999 899999999999999999988999 88887559999999999975

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=99.08  E-value=3.4e-10  Score=68.98  Aligned_cols=52  Identities=38%  Similarity=0.719  Sum_probs=46.7

Q ss_pred             EEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEE
Q psy13524        136 IVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       136 ~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      ++|+++|.+ ..+++|+|.+||.+.+++..+++| |.++..+++.|+||.+|++
T Consensus         2 ~~a~~~~~~-~~~~~l~~~~Gd~v~v~~~~~~~w-~~~~~~~~~~G~vP~~~v~   53 (54)
T cd00174           2 VRALYDYDA-RDPDELSFKKGDIIEVLEKSDDGW-WEGRLLGGKRGLFPSNYVE   53 (54)
T ss_pred             EEEEEeeCC-CCCCCCCCCCCCEEEEEEcCCCCe-EEEEECCCCEEEEccccCc
Confidence            578999999 788999999999999999988999 8888755599999999975

>KOG1264|consensus

Probab=99.02  E-value=4.1e-10  Score=100.26  Aligned_cols=70  Identities=24%  Similarity=0.566  Sum_probs=63.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcccceeeCCccccC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~   71 (235)
                      +||||.++ .++.|+||++.+++|+|+||.+++..|..+...|+||.+||+||.++++..+++|.+|+...
T Consensus       672 aFLiR~~~-~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~FesLv~lv~yY~k~~lyR~mkLr~PVnee  741 (1267)
T KOG1264|consen  672 AFLIRKRE-GSNSYAISFRARGKIKHCRINRDGRHFVLGTSAFESLVELVSYYEKHPLYRKMKLRYPVNEE  741 (1267)
T ss_pred             ceEEEecc-CCceEEEEEEEcCcEeEEEEccCceEEEeccHHHHHHHHHHHHHhcChhhhcccccCcCCHH
Confidence            69999444 56789999999999999999997766988999999999999999999999999999998764

>KOG0162|consensus

Probab=99.00  E-value=3.2e-10  Score=99.87  Aligned_cols=55  Identities=33%  Similarity=0.647  Sum_probs=51.7

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ...+.|+|+|.+ ++.+||+|++||+|.++.++..|| |.++. +|+.||||.+||.+
T Consensus      1051 ~p~~~A~Y~y~g-q~~dEls~~~~diIei~~edpSGW-w~gk~-~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1051 NPVCEALYDYPG-QDVDELSFKKGDIIEIMREDPSGW-WLGKL-NGKEGLFPGNYVTE 1105 (1106)
T ss_pred             CcceeeeccCCC-CCcccccccCCCEEEEeccCCCcc-hhhcc-CCcccccccccccc
Confidence            367999999999 899999999999999999999999 99998 99999999999975

>KOG4225|consensus

Probab=98.95  E-value=1.1e-09  Score=91.33  Aligned_cols=57  Identities=26%  Similarity=0.557  Sum_probs=53.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ +...||.|.+||+|.|+.+.|.+| ..|.. +|+.|+||++||+.+..
T Consensus       231 ~~aralf~F~~-qt~kEL~~~kGDIVyI~rkvD~nW-yeGEh-hGr~GifP~sYvE~~~~  287 (489)
T KOG4225|consen  231 RAARALFDFEA-QTPKELPFNKGDIVYILRKVDQNW-YEGEH-HGRVGIFPASYVEILTP  287 (489)
T ss_pred             chhhheecccc-CCccccccCCCCEEEEEeeccCce-eeeee-cceecceechheeecCc
Confidence            44899999999 899999999999999999999999 88888 99999999999998864

>smart00252 SH2 Src homology 2 domains

Probab=98.91  E-value=1e-09  Score=73.59  Aligned_cols=32  Identities=25%  Similarity=0.556  Sum_probs=30.1

Q ss_pred             CccccCCCChHHHHHhhccCCCeeEEeeccCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      .+||||.|+|++||++|.+.++|+||||.|++
T Consensus         1 ~~w~~g~i~r~~Ae~lL~~~~~G~FLvR~s~~   32 (84)
T smart00252        1 QPWYHGFISREEAEKLLKNEGDGDFLVRDSES   32 (84)
T ss_pred             CCeecccCCHHHHHHHHhcCCCcEEEEEcCCC
Confidence            37999999999999999998899999999987

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>KOG1702|consensus

Probab=98.83  E-value=3e-09  Score=80.24  Aligned_cols=58  Identities=33%  Similarity=0.558  Sum_probs=54.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      .+..++|.|||.| ++.++++|.-||.|..+...|+||+|+....+|.+|+.|+||++.
T Consensus       206 ~gktyra~ydysa-qdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~  263 (264)
T KOG1702|consen  206 TGKTYRAFYDYSA-QDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF  263 (264)
T ss_pred             CCccchhhccCcc-cCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence            4577999999999 999999999999999999999999999998899999999999985

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=98.82  E-value=1.6e-09  Score=71.42  Aligned_cols=30  Identities=27%  Similarity=0.510  Sum_probs=28.6

Q ss_pred             cccCCCChHHHHHhhcc-CCCeeEEeeccCC
Q psy13524        203 WFHPECTKNDAVDMLVK-AGPVNFTISESDS  232 (235)
Q Consensus       203 w~~~~~~r~~ae~~l~~-~~~g~fliR~s~~  232 (235)
                      ||+|.|+|++||++|++ ..+|+||||+|++
T Consensus         1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~   31 (77)
T PF00017_consen    1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSS   31 (77)
T ss_dssp             TBEESSHHHHHHHHHHTTSSTTEEEEEEESS
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCeEEEEeccc
Confidence            99999999999999999 6699999999986

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=98.80  E-value=3.8e-09  Score=72.32  Aligned_cols=31  Identities=26%  Similarity=0.577  Sum_probs=29.4

Q ss_pred             ccccCCCChHHHHHhhccCCCeeEEeeccCC
Q psy13524        202 DWFHPECTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       202 ~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      +||||.|+|++||++|.+..+|+||||.|++
T Consensus         1 ~w~~g~i~r~~Ae~~L~~~~~G~FLiR~s~~   31 (94)
T cd00173           1 PWYHGPISREEAEELLKKKPDGTFLVRDSES   31 (94)
T ss_pred             CccccCCCHHHHHHHHhcCCCceEEEEecCC
Confidence            6999999999999999998899999999985

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>KOG4348|consensus

Probab=98.76  E-value=2.3e-09  Score=89.46  Aligned_cols=58  Identities=29%  Similarity=0.628  Sum_probs=54.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ..+++++.|.|.+ +.++||.|..||+|.|++....|| |.|.+ +|..|+||+|+|..+.
T Consensus        99 ~~r~c~v~f~Y~p-qndDELelkVGDiIeli~eVEeGW-w~G~L-ngk~GmFPsNFVkel~  156 (627)
T KOG4348|consen   99 QARICVVTFAYSP-QNDDELELKVGDIIELISEVEEGW-WKGKL-NGKVGMFPSNFVKELP  156 (627)
T ss_pred             cceeEEEEEeecC-CCCceeeeeeccHHHhhhHhhhhh-hhcee-cCcccccchhhceecC
Confidence            4567899999999 899999999999999999999999 99999 8999999999999875

>KOG4637|consensus

Probab=98.73  E-value=1.5e-08  Score=83.01  Aligned_cols=68  Identities=22%  Similarity=0.413  Sum_probs=57.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCC-cccCCHHHHHHHhhhCCc-----ccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGG-RTFECLDAVINRYRKEQI-----VEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~-~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~   69 (235)
                      +||||+|. ..|.|+|||..++.|+|+.|.++..+| +... ..+.||.+||.||+..++     .+.+.|.+|+-
T Consensus       355 tFLIR~ss-~~g~yalSV~~~~~V~HClIy~tatG~GFa~pyn~y~tlk~lV~hY~h~SLe~HnDal~ttLr~Pv~  429 (464)
T KOG4637|consen  355 TFLIRESS-KGGCYALSVVHDGEVKHCLIYQTATGFGFAEPYNLYSTLKELVLHYQHTSLEQHNDALTTTLRYPVF  429 (464)
T ss_pred             eEEEeecc-CCCceEEEEEECCceeeeEEeeccccccccchhHHHHHHHHHHHHHhhhhHHhhcccccccccccee
Confidence            69999964 578999999999999999999988885 5444 478999999999998664     57888988874

>KOG4225|consensus

Probab=98.69  E-value=1e-08  Score=85.69  Aligned_cols=55  Identities=33%  Similarity=0.564  Sum_probs=49.0

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      .++|+|.|.+ +.++||.|+.||+|.|+++.|+||.-+...++|+-|.||.|||++
T Consensus       434 ~yrAly~Y~p-qnedeLEl~egDii~VmeKcddgWfvGts~rtg~fGtFPgnyV~~  488 (489)
T KOG4225|consen  434 KYRALYSYRP-QNEDELELREGDIIDVMEKCDDGWFVGTSRRTGKFGTFPGNYVKR  488 (489)
T ss_pred             cceeccccCC-CCchhheeccCCEEeeeecccCcceeccceecccccccCcccccc
Confidence            3799999999 899999999999999999999999444445599999999999975

>KOG2856|consensus

Probab=98.56  E-value=1.5e-08  Score=82.97  Aligned_cols=56  Identities=29%  Similarity=0.468  Sum_probs=49.2

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|||.+ ++.+||+|+.||.|..+... ..|| =.|+..+|+.|++|+|||+.+
T Consensus       415 v~vraLYDY~g-qE~DElsfkaGd~l~kl~eeDeqGW-C~Grl~~G~vGLyPAnYVe~~  471 (472)
T KOG2856|consen  415 VRVRALYDYAG-QEGDELSFKAGDELEKLEEEDEQGW-CKGRLDSGRVGLYPANYVECI  471 (472)
T ss_pred             eeEEeeeccCc-ccccchhhccccHhhhcCCcccccc-ccccccCCcccccchhhhhcc
Confidence            56899999999 89999999999999888765 5688 788886799999999999854

>KOG2546|consensus

Probab=98.50  E-value=4.4e-08  Score=81.73  Aligned_cols=56  Identities=36%  Similarity=0.695  Sum_probs=51.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ..++|+|||.+ ...+||+|..|-+|.|+++.|+|| |.+.. ++.+|+||.|||+++.
T Consensus       424 EkVv~iydy~~-~KddeLsf~E~ailyv~kknddgw-~EgV~-~~VTglFpgnyve~~~  479 (483)
T KOG2546|consen  424 EKVVAIYDYTA-DKDDELSFAEGAILYVLKKNDDGW-YEGVQ-DGVTGLFPGNYVEPLK  479 (483)
T ss_pred             HHHHhhccccc-ccccccccccccEEEEEEecCCcc-hhhee-cCcceeccCccccccc
Confidence            45789999999 788999999999999999999999 99998 8999999999999874

>KOG4348|consensus

Probab=98.46  E-value=1.2e-07  Score=79.37  Aligned_cols=58  Identities=28%  Similarity=0.562  Sum_probs=52.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...+++.+|.|.+ ++++||.|+.||++.++.+.  |-|| |.|.+ +|+.|.||.|+|+-+.
T Consensus       260 tKeycrv~F~Ye~-qndDELt~KEgdil~lItK~cgdaGW-weGEL-nGk~GvFPDNFv~lv~  319 (627)
T KOG4348|consen  260 TKEYCRVKFVYEP-QNDDELTLKEGDILILITKNCGDAGW-WEGEL-NGKKGVFPDNFVELVQ  319 (627)
T ss_pred             hhhheeeeeeecC-CCccceeeccccEEEEecccccccce-eeeee-cCccccCCchhhhhcC
Confidence            3467899999999 89999999999999998865  7799 99999 9999999999998764

>KOG3655|consensus

Probab=98.43  E-value=7.2e-08  Score=81.65  Aligned_cols=57  Identities=25%  Similarity=0.546  Sum_probs=52.6

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ .++.+++|..+|.|.+++..|.|| |.+....|..|+||+|||+.+
T Consensus       427 ~q~A~A~~dyqA-AddtEisf~p~d~it~Id~vdegw-w~g~~pdG~~glfPaNyV~li  483 (484)
T KOG3655|consen  427 PQTARALYDYQA-ADDTEISFDPPDAITLIDQVDEGW-WTGQGPDGEVGLFPANYVELI  483 (484)
T ss_pred             CCCccccccccc-cCCcccccCCccccccccccCCcc-ccccCCCCCcCcccccccccC
Confidence            456899999999 899999999999999999999999 999988999999999999753

>KOG1029|consensus

Probab=98.42  E-value=1.2e-07  Score=84.37  Aligned_cols=58  Identities=26%  Similarity=0.542  Sum_probs=50.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      .-.++|+|.|.+ .+.+|++|..||+|.|-...  .+|| ..|.. +|+.||||.+||+.+..
T Consensus       693 ~vkyrAly~Fea-Rs~dEisf~pGDII~V~esq~aEPGW-laGel-~gktGWFPenyvEki~~  752 (1118)
T KOG1029|consen  693 TVKYRALYPFEA-RSHDEISFEPGDIIIVFESQAAEPGW-LAGEL-RGKTGWFPENYVEKIPA  752 (1118)
T ss_pred             eEEEeeeccccc-CCcccccccCCCEEEEehhccCCccc-cccee-ccccCcCcHHHHhhccc
Confidence            346899999999 79999999999999996543  7899 88888 99999999999998753

>KOG0515|consensus

Probab=98.38  E-value=3.6e-08  Score=84.46  Aligned_cols=57  Identities=28%  Similarity=0.493  Sum_probs=48.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc---CCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL---GDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~---~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....+-|+|||.+ +..+||+|..||-++|+.++   +.+| |.+++ +|+.|++|.||+.-.
T Consensus       682 N~G~vYAlwdYea-qf~DELsf~eGd~lTvirr~d~~eteW-Wwa~l-ng~eGyVPRnylgLy  741 (752)
T KOG0515|consen  682 NKGVVYALWDYEA-QFEDELSFDEGDELTVIRRDDEVETEW-WWARL-NGEEGYVPRNYLGLY  741 (752)
T ss_pred             ccceeEEeecccc-cccccccccCCceeEEEecCCcchhhh-hhHhh-cCcccccchhhhhcC
Confidence            4567889999999 89999999999999999885   4579 66667 999999999998643

>KOG1843|consensus

Probab=98.27  E-value=4.1e-07  Score=75.67  Aligned_cols=55  Identities=24%  Similarity=0.518  Sum_probs=49.6

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC--CCeeEEEecCCCceeEEeCCcEEe
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG--DGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~--~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ...++|+|+|.+ +-+.+|+|++||+|.++++.+  ..| |.++. ++..|+||+|||+.
T Consensus       416 ~n~a~a~ysfag-e~~GDl~f~kgDii~il~ks~s~~dw-wtgr~-~~~egifPanyv~~  472 (473)
T KOG1843|consen  416 PNIATALYSFAG-EQPGDLSFQKGDIITILKKSDSANDW-WTGRG-NGYEGIFPANYVSL  472 (473)
T ss_pred             cceeeeeehhcc-CCCCCcccccCceEEEecCCcchhhH-HHhhc-cccccccccceecc
Confidence            458999999999 899999999999999998864  579 99998 99999999999964

>KOG3875|consensus

Probab=98.26  E-value=1.4e-07  Score=75.70  Aligned_cols=60  Identities=22%  Similarity=0.369  Sum_probs=49.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC-----CCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG-----DGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-----~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      +...++|+|||.+ .++.||+|++||.+.|..+++     +.| |..+.. ++..|+||.|||+.+..
T Consensus       267 p~~~arA~YdF~a-~np~ElSlk~Gdml~ia~K~dq~~~~~~g-W~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  267 PHEFARALYDFVA-RNPVELSLKKGDMLAIASKEDQQGVRCEG-WLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             hHHHHHHHhhhhc-CCHHHhhhhcCchhhcccccccCCCCCcc-eeeeeccCCeeeeeehhhhhhhhc
Confidence            3367899999999 788999999999999987763     457 776665 77899999999998754

>KOG2222|consensus

Probab=98.02  E-value=2e-07  Score=79.22  Aligned_cols=58  Identities=34%  Similarity=0.527  Sum_probs=52.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...+++|++||.. .+++||.|++.|+|++++..|... |.|.. +|-.||||+.+|+.++
T Consensus       547 ~~krakal~df~r-~dddelgfrkndiitiisekdehc-wvgel-nglrgwfpakfvelld  604 (848)
T KOG2222|consen  547 GAKRAKALHDFAR-EDDDELGFRKNDIITIISEKDEHC-WVGEL-NGLRGWFPAKFVELLD  604 (848)
T ss_pred             hhHHHHHHhhhhh-ccccccccccccEEEEeecCCcce-eeecc-ccccccchHHHHHHHH
Confidence            3467899999998 899999999999999999999998 99998 9999999999998764

>KOG1930|consensus

Probab=97.87  E-value=1e-05  Score=67.76  Aligned_cols=33  Identities=24%  Similarity=0.583  Sum_probs=31.5

Q ss_pred             cCccccCCCChHHHHHhhccCCCeeEEeeccCC
Q psy13524        200 VFDWFHPECTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       200 ~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      .+-||..+|||+||-.||+.+.+|+|+||+|.|
T Consensus       211 SKyWYKP~isREQAIalLrdkePGtFvvRDS~S  243 (483)
T KOG1930|consen  211 SKYWYKPNISREQAIALLRDKEPGTFVVRDSHS  243 (483)
T ss_pred             cccccCCCCCHHHHHHHhhcCCCCeEEEecCCc
Confidence            589999999999999999999999999999976

>KOG3523|consensus

Probab=97.77  E-value=2.6e-06  Score=74.34  Aligned_cols=60  Identities=30%  Similarity=0.489  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....+.++..|.+ ..+++|++..+|++.|+.+.++||+.+.+..+|..||||..|++.+.
T Consensus       607 dcpQv~~~~sy~a-~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~  666 (695)
T KOG3523|consen  607 DCPQVQCVHSYKA-KQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEIT  666 (695)
T ss_pred             CCChhheeecccc-CCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhc
Confidence            3456888999999 89999999999999999999999977777889999999999999875

>KOG0609|consensus

Probab=97.74  E-value=1.3e-05  Score=69.42  Aligned_cols=88  Identities=22%  Similarity=0.374  Sum_probs=59.7

Q ss_pred             chhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeeccCCCCC------CCCcccCCCCEEEEeeccCCCeeEEE
Q psy13524        100 SLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPD------TDELTFQKGDIFFVHNELGDGWLWVT  173 (235)
Q Consensus       100 ~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~------~~eL~~~~gd~i~v~~~~~~~w~w~~  173 (235)
                      ++.++++..+..+..+  +..+.|...+.+......++|++||.+.++      +..|.|++||++.|++++|..| |.+
T Consensus       183 ~~~e~q~~l~~~~G~i--tfkiiP~~~~~~~~~~~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nW-WQA  259 (542)
T KOG0609|consen  183 SPEELQELLRNSRGSI--TFKIIPSYRPPPQQQVVFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNW-WQA  259 (542)
T ss_pred             CHHHHHHHHHhCCCcE--EEEEcccccCCCceeeeeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcch-hhh
Confidence            3456666665544222  445555433222223467899999999433      2369999999999999999999 988


Q ss_pred             ecCC----CceeEEeCCcEEe
Q psy13524        174 AHRT----GEQGMIFRDLVED  190 (235)
Q Consensus       174 ~~~~----~~~G~~P~~~v~~  190 (235)
                      +...    +..|.+|+...+.
T Consensus       260 ~~~~~~~~~~AGLiPS~~~qe  280 (542)
T KOG0609|consen  260 RRVGDPFGGLAGLIPSKELQE  280 (542)
T ss_pred             hcccCccccccccccCHHHHH
Confidence            7642    5689999977654

>KOG4773|consensus

Probab=97.61  E-value=7e-06  Score=67.19  Aligned_cols=94  Identities=17%  Similarity=0.192  Sum_probs=69.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccCCCCCC-------CcCcccc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPN-------TVFDWFH  205 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~-------~~~~w~~  205 (235)
                      .+.+.|+++|.+ +...||.|.+||++.++.+++.+| |.|.. .+..||+|..|++.++.  .|.       .+-+++.
T Consensus       175 ~q~~~a~~df~g-ns~~EL~l~agdV~~~~~r~ek~W-~~gk~-R~~~g~yp~sF~~~ld~--fpeeD~~~nw~r~pY~~  249 (386)
T KOG4773|consen  175 AQRAEASFDFPG-NSKLELNLVAGDVEFLLSRDEKYW-LLGKV-RGLTGYYPDSFVKQLDD--FPEEDAGTNWLRCPYYP  249 (386)
T ss_pred             hHHHHhhccCCC-CccceeeeehhhHHHHHhhcccce-eeeee-ccccccccHHhhhhhcc--CccccCCCCcccCcccc
Confidence            356788999999 788999999999999999999999 88888 88999999999998853  222       1446666


Q ss_pred             CCCC---hHHHHHhhccCC---CeeEEeeccC
Q psy13524        206 PECT---KNDAVDMLVKAG---PVNFTISESD  231 (235)
Q Consensus       206 ~~~~---r~~ae~~l~~~~---~g~fliR~s~  231 (235)
                      |.++   ...-+..|..-+   +|..+||++.
T Consensus       250 ~~v~tv~e~~~~~rl~~lp~~l~~~~~~~~r~  281 (386)
T KOG4773|consen  250 GPVSTVKEGIEESRLEVLPKYLDGLEVIRPRE  281 (386)
T ss_pred             CchHHhhhhhhHhhhhhhHHhhccccccChhh
Confidence            6542   222233343333   8888887543

>KOG2528|consensus

Probab=97.37  E-value=7e-05  Score=63.41  Aligned_cols=56  Identities=21%  Similarity=0.421  Sum_probs=50.3

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      .++++|+|.. +...+++...||++.++... ..|| |.+++..|..|+||+.||+.+.
T Consensus         4 k~RamyDf~~-E~~sElsi~~~evl~i~~e~~~~Gw-Leg~Nsrge~GlfPa~yVeV~~   60 (490)
T KOG2528|consen    4 KARAMYDFQS-EGHSELSIWEGEVLSITSEDVIEGW-LEGSNSRGERGLFPASYVEVTR   60 (490)
T ss_pred             chhhhcchhh-cccccccccccceeeecCccccccc-ccCCCccCccCCCcccceeeec
Confidence            5689999999 79999999999999998876 5688 9999999999999999999763

>KOG3632|consensus

Probab=97.34  E-value=0.00012  Score=67.41  Aligned_cols=59  Identities=25%  Similarity=0.533  Sum_probs=49.0

Q ss_pred             CccEEEEeeccCCCC-------CCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMP-------DTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~-------~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...+++|+|||.+..       .+.||.|++|++|.|....| +|+ +.+.. +|+.|++|.|.|.++.
T Consensus      1137 parifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgF-Y~GE~-ngr~GlIPcNmvae~~ 1203 (1335)
T KOG3632|consen 1137 PARIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGF-YMGEL-NGRRGLIPCNMVAEQP 1203 (1335)
T ss_pred             cceeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccce-eeccc-cccccccccccccccc
Confidence            457899999998732       24489999999999998765 567 78887 9999999999998875

>KOG4575|consensus

Probab=97.32  E-value=0.00045  Score=61.06  Aligned_cols=60  Identities=23%  Similarity=0.406  Sum_probs=49.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|.+.+ +..++|.|..||+|+++...| ||||.+... ....|+||.|+|..++.
T Consensus         7 ~p~~vrA~y~w~g-e~eGdl~f~egDlie~trI~d-gkwwi~lhrNk~~~g~fpsNFvhcLd~   67 (874)
T KOG4575|consen    7 LPCMVRALYAWPG-EREGDLKFTEGDLIEQTRIED-GKWWILLHRNKDEDGLFPSNFVHCLDK   67 (874)
T ss_pred             CCceEEeeccCCC-CcccccceecccceeEEeecc-ceeeeeeeecccccccCcccceeeccc
Confidence            3467899999999 889999999999999999855 554988876 45689999999977653

>KOG3557|consensus

Probab=97.28  E-value=0.00012  Score=64.63  Aligned_cols=58  Identities=22%  Similarity=0.607  Sum_probs=51.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++..|||.+ .+..||+..+||++.|++. ..+| |.++...|+.|++|.|.+.++.
T Consensus       499 ~~k~~~~~Ydf~a-rNs~ELsV~k~E~LEvl~d-~R~W-W~~kn~~G~~GyvP~nIL~~~~  556 (721)
T KOG3557|consen  499 GKKWVLVLYDFQA-RNSSELSVKKGEVLEVLDD-GRKW-WKVKNGHGRAGYVPSNILAPLQ  556 (721)
T ss_pred             cceeeeeehhhhc-ccchhhhhhhhhhhhhhhc-cccc-eeccCccCCCCCcchhhhccCC
Confidence            3457889999999 8999999999999999886 6789 9999989999999999988774

>KOG4792|consensus

Probab=97.03  E-value=0.0014  Score=51.02  Aligned_cols=59  Identities=22%  Similarity=0.189  Sum_probs=48.8

Q ss_pred             ccEEEEeeccCCCC-CCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMP-DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~-~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++++++-.++. +...|.+.+||++.|+.+.-+|. |.+.+ +|+.|.||-.||.....
T Consensus       227 Pa~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGq-wegEl-nGk~G~fPfThvrf~d~  286 (293)
T KOG4792|consen  227 PAYARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQ-WEGEL-NGKIGHFPFTHVRFTDV  286 (293)
T ss_pred             ChheeeehhcCCCccChhhhhhhcCcEEEEEeeccCce-eeeee-cCccccccceeEEeecc
Confidence            34577777665522 55689999999999999998898 99999 99999999999987754

>KOG1930|consensus

Probab=96.98  E-value=0.00072  Score=56.97  Aligned_cols=68  Identities=22%  Similarity=0.324  Sum_probs=55.0

Q ss_pred             CeEEeecCCCCCCEEEEEEE----------C-----CEEeEEEEEeeCCeE----EcCCcccCCHHHHHHHhhhCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI----------N-----NQIQRFRIEKKAVRY----LMGGRTFECLDAVINRYRKEQIVEG   61 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~----------~-----~~v~h~~I~~~~~~~----~~~~~~F~sl~eLi~~y~~~~~~~~   61 (235)
                      +||||+|.+.+|.|=|+++.          +     .-|+||.|+....+.    ....-.|-||..||--|.=..+.+.
T Consensus       235 tFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGVkLKGC~nEP~FGSLSALV~QHSIt~LALP  314 (483)
T KOG1930|consen  235 TFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGVKLKGCDNEPVFGSLSALVYQHSITALALP  314 (483)
T ss_pred             eEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCceeccCCCCCCccchhHHHHhhccchhhhcc
Confidence            69999999999999888874          1     249999998877773    2234489999999998888888888


Q ss_pred             eeeCCcc
Q psy13524         62 HTLGFPV   68 (235)
Q Consensus        62 ~~L~~p~   68 (235)
                      |+|.-|-
T Consensus       315 ckL~iP~  321 (483)
T KOG1930|consen  315 CKLVIPD  321 (483)
T ss_pred             eeEeccC
Confidence            8887763

>KOG3508|consensus

Probab=96.87  E-value=0.0014  Score=60.85  Aligned_cols=122  Identities=39%  Similarity=0.596  Sum_probs=90.0

Q ss_pred             CchhhcccccCCCCCCCCCCCccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        112 SDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       112 ~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      +....+.....|.-|+.+......++++-.|..+...+++.|.+|+...+-....++|+|......+.-|.+-++-+...
T Consensus       141 s~vl~gE~~~f~~lPpl~~~~~~~~~~i~~~~k~~~n~~l~~~~~~~f~~~~~~~d~w~~v~t~~~~e~~~i~~s~~~~~  220 (932)
T KOG3508|consen  141 SNVLWGENFLFPVLPPLPVVDVLRVRAILPKKKKPTNDEIGFVKGDEFPVHRDLEDGWYWVTTSRTDEGGSIIASLVGGK  220 (932)
T ss_pred             chhccccccccccCCccchhhhhhhhhhhhhhccCcccccccccchhheecccccceeEEeeccccccCCcccccccccc
Confidence            33455566777766666666667778888888755677999999888777666788998888776555555444444444


Q ss_pred             cCCCCCCCcCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        192 DETIDPNTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       192 ~~~~~p~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      ....+++....|++++|...+|.++|...+ .+.|++|.+.-.
T Consensus       221 ~~~~~~~~~ar~q~i~i~~~e~y~~~~e~~~~~y~~lc~~lnp  263 (932)
T KOG3508|consen  221 SESPDPRIKARWQSINILPMEAYDELAETGTYNYFLLCPVLNP  263 (932)
T ss_pred             cCCCCccccccccccccCchHHHHHHHHHhccceeeeecccCC
Confidence            344566778999999999999999999998 558999876543

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=96.85  E-value=0.018  Score=45.41  Aligned_cols=109  Identities=23%  Similarity=0.442  Sum_probs=70.0

Q ss_pred             eEEeecCCCCCCEEEEEEE-CCEEeEEEEEeeCC-------e-EEcCCcccCCHHHHHHHhhh-----------CCc---
Q psy13524          2 FLVRPSDNSPGDYSLFFHI-NNQIQRFRIEKKAV-------R-YLMGGRTFECLDAVINRYRK-----------EQI---   58 (235)
Q Consensus         2 FLvR~s~~~~g~~~lsv~~-~~~v~h~~I~~~~~-------~-~~~~~~~F~sl~eLi~~y~~-----------~~~---   58 (235)
                      ++||.|+......+++++. ++...|+-|...+.       . +.+++..|..|.|||.-|-.           +.-   
T Consensus        61 ~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~~~~yeDLDEii~r~V~pm~~~v~~~~~h~kf~~  140 (220)
T PF14633_consen   61 VIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIGGEEYEDLDEIIARHVEPMARNVEEMMNHRKFKD  140 (220)
T ss_dssp             EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEETTEEESSHHHHHHHCHHHHHHHHHHHHCSTTEES
T ss_pred             EEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEECCeEECCHHHHHHHHHHHHHHHHHHHHhCccccC
Confidence            6899998766667888886 55778999976542       1 56789999999999998843           110   


Q ss_pred             cc----ceeeCC-----c--------cccCCCceeecc---------eEEEEEeecCeeEeeeEEEcchhhhhhcccc
Q psy13524         59 VE----GHTLGF-----P--------VTRINLGIFIPS---------AIFRVTAVCGDFYIGGRQFDSLSDLISYYSS  110 (235)
Q Consensus        59 ~~----~~~L~~-----p--------~~~~~~~~~l~~---------~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~  110 (235)
                      +.    .-.|..     |        +.+..+|+++..         .++-+.-....+.+.+..|+++.+|+.+++.
T Consensus       141 g~~~e~e~~L~~~k~~nP~~i~Y~f~~~~~~PG~F~L~y~~~~~~~~~~~~v~V~p~Gf~~r~~~f~~~~~L~~~FK~  218 (220)
T PF14633_consen  141 GTKEEVEEWLKEEKKANPKRIPYAFCISKEHPGYFILSYKPNKNPRHEYWPVKVTPDGFRFRKQVFPSLDRLINWFKK  218 (220)
T ss_dssp             S-CCCCHHHHHCHHHHSTTS-EEEEEE-TTSTTEEEEEEESSTTS-EEEEEEEE-SSSEEETTEEESSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCceEEEEECCCCCCEEEEEEEcCCCCceEEeeEEEecCcEEEecccCCCHHHHHHHHhh
Confidence            10    001111     1        111167777643         3323555556667779999999999988753

>KOG1451|consensus

Probab=96.75  E-value=0.0013  Score=57.93  Aligned_cols=56  Identities=32%  Similarity=0.557  Sum_probs=47.3

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEee-ccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHN-ELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~-~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++++|.-.+ ....+++|..|.++.-+. ...+|| ..|++ +|+.|++|+|||+++
T Consensus       756 ~rk~k~lyAc~a-~h~selsf~~gt~f~nv~~S~e~Gw-l~GtL-nGktglip~nyve~l  812 (812)
T KOG1451|consen  756 SRRVKTLYACTA-DHHSELSFEPGTIFTNVYESNEDGW-LVGTL-NGKTGLIPSNYVEPL  812 (812)
T ss_pred             cccccceeccCC-CCcccccccCcceeeeecccCCCCc-eeeec-CCCcccCcccccCcC
Confidence            355778888888 788899999999997665 557899 88888 999999999999864

>KOG3775|consensus

Probab=96.65  E-value=0.0012  Score=54.98  Aligned_cols=58  Identities=28%  Similarity=0.425  Sum_probs=50.2

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      +.-++++.|.+ ..++||.+..||-|.|-...++-|..+...++|++|+||+.|+-.++
T Consensus       263 ~THR~~~rFvP-RHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd  320 (482)
T KOG3775|consen  263 QTHRAVFRFVP-RHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVD  320 (482)
T ss_pred             hhhhhhhhccC-CCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecC
Confidence            45688999999 79999999999999999888999944555669999999999998775

>KOG3771|consensus

Probab=96.63  E-value=0.0014  Score=56.21  Aligned_cols=54  Identities=24%  Similarity=0.289  Sum_probs=43.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEE
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      ...++++|+|.+ .+.++|+|+.||+|.|+...+ ..| |.|++ .|..+-+|.+|+.
T Consensus       400 ~~~v~a~~dy~a-~~~deLsf~~gd~i~vi~s~~~~e~-~eg~~-mg~ke~~~~~~~~  454 (460)
T KOG3771|consen  400 LYKVKALHDYAA-QDTDELSFEAGDVILVIPSDNPEEQ-DEGWL-MGVKESDWNGLFP  454 (460)
T ss_pred             ccceeccccccc-cccccccccCCCEEEEecCCCccch-hhHHH-hhhccccccccee
Confidence            456899999999 899999999999999998653 457 88887 7776666666653

>KOG0194|consensus

Probab=96.25  E-value=0.0029  Score=55.51  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=27.7

Q ss_pred             cCccccCCCChHHHHHhhccCCCeeEEeeccCC
Q psy13524        200 VFDWFHPECTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       200 ~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      ..+||||-+.|++|+.+|.+  +|.||||.|+-
T Consensus        48 ~~~~yHG~l~red~~~lL~~--~GDfLvR~s~~   78 (474)
T KOG0194|consen   48 ELPYYHGLLPREDAEKLLKN--DGDFLVRASEP   78 (474)
T ss_pred             cCccccccccHhHHHHHhCC--CCceEEEeecc
Confidence            47999999999999999988  67799998864

>KOG4429|consensus

Probab=96.20  E-value=0.0011  Score=53.44  Aligned_cols=55  Identities=18%  Similarity=0.161  Sum_probs=49.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..+.|.|+|.+ ...++|....||++.+-++...|| |-+++ .|.-|-||+.+++.+
T Consensus       364 ~lcdafYSfqa-rqddel~~e~gditif~Ekkeeg~-~f~rl-~gd~~hf~Aa~iEea  418 (421)
T KOG4429|consen  364 ILCDAFYSFQA-RQDDELGGEIGDITIFDEKKEEGP-TFCRL-LGDFEHFHAAEIEEA  418 (421)
T ss_pred             HHhhhhhcccc-ccccccCCcccceeeecCcccCCC-ceeee-ccccCCCcHHHHHHh
Confidence            45789999999 678999999999999999999999 99999 899999999988754

>KOG3697|consensus

Probab=95.99  E-value=0.0098  Score=47.94  Aligned_cols=63  Identities=21%  Similarity=0.255  Sum_probs=49.8

Q ss_pred             CCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcc-----cceeeCCcccc
Q psy13524          8 DNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV-----EGHTLGFPVTR   70 (235)
Q Consensus         8 ~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~-----~~~~L~~p~~~   70 (235)
                      ..++|+|+|+-..+++-||....--++-.....+.|+|+.-||+|++.+.+-     ....|..|+.|
T Consensus       276 ~~~~gqyvltgl~~~~~khlllvdpegvvrtkd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r  343 (345)
T KOG3697|consen  276 TTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVER  343 (345)
T ss_pred             cCCCccEEEecccCCCcceEEEECCccceecccchhhHHHHHHHHhhhccCceecCcchhhhhCcccc
Confidence            4579999999999999999976543332456778999999999999998763     34677778765

>KOG3751|consensus

Probab=95.90  E-value=0.0021  Score=55.79  Aligned_cols=69  Identities=22%  Similarity=0.277  Sum_probs=55.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe---EE---cCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR---YL---MGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~---~~---~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      .||||+|.+.|..|+++..+..+|+||+|.-.+..   |+   .+...|.++..|+++|+-++..+.+.|+.-|.
T Consensus       544 ~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~sd~~ql~~~~ql~k~~l~~al~~~~~  618 (622)
T KOG3751|consen  544 LFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKFSDLIQLVEFYQLNKGVLPCALKHCCE  618 (622)
T ss_pred             eeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCccccccccccchhhcCCCcchHHHHHHHH
Confidence            38999999999999999999999999999765443   43   24568999999999999887666666655443

>KOG3725|consensus

Probab=95.85  E-value=0.0024  Score=50.59  Aligned_cols=56  Identities=16%  Similarity=0.312  Sum_probs=46.9

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec--cCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE--LGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~--~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++.+|||.+ ..+.||++...|+|.|..-  .|.+| ..+.. +++.|-+|..|++-+
T Consensus       317 trkArVlyDYdA-a~s~ElslladeiitVyslpGMD~dw-lmgEr-GnkkGKvPvtYlELL  374 (375)
T KOG3725|consen  317 TRKARVLYDYDA-ALSQELSLLADEIITVYSLPGMDADW-LMGER-GNKKGKVPVTYLELL  374 (375)
T ss_pred             ccceeeeecccc-cchhhhhhhhcceEEEEecCCCChHH-hhhhh-cCCCCCcchhHHHhc
Confidence            456899999999 8999999999999999775  47888 66665 788899999998643

>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A

Probab=95.32  E-value=0.032  Score=36.83  Aligned_cols=45  Identities=22%  Similarity=0.334  Sum_probs=31.3

Q ss_pred             CCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       147 ~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      +..+|.+.+|+.+.|+...+.+- |.+|+..|+-|++|.+++-+.+
T Consensus        29 G~kDLpi~~GE~LeVI~~t~~~k-vlCRN~~GKYGYV~~~~L~~~d   73 (89)
T PF14603_consen   29 GGKDLPIKPGEILEVIQFTDDNK-VLCRNSEGKYGYVLRSHLLPLD   73 (89)
T ss_dssp             -TTB----TT-B-EEEEESSSSE-EEEEETTTEEEEEEGGGS----
T ss_pred             CcccCCcCCCCEEEEEEeCCCCe-EEEeCCCCceeEEEHHHccCCC
Confidence            45789999999999999988888 9999999999999999986654

>KOG3751|consensus

Probab=95.23  E-value=0.013  Score=51.05  Aligned_cols=36  Identities=19%  Similarity=0.495  Sum_probs=33.4

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      |..+.|||++|+|.++.+++++.|  +|.||+|+|.|+
T Consensus       516 h~sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsn  553 (622)
T KOG3751|consen  516 HRSQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSN  553 (622)
T ss_pred             cccccCcccccCchhhhhHHHhcccceeeeeecccccC
Confidence            567899999999999999999999  999999999886

>KOG0199|consensus

Probab=94.30  E-value=0.051  Score=49.70  Aligned_cols=52  Identities=29%  Similarity=0.454  Sum_probs=39.3

Q ss_pred             EEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEe-cCCCceeEEeCCcEE
Q psy13524        137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTA-HRTGEQGMIFRDLVE  189 (235)
Q Consensus       137 ~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~-~~~~~~G~~P~~~v~  189 (235)
                      +|..+|.. ..++.|-|++||.|.|++....+.+|.+. .++++.|.||.+-|.
T Consensus       378 ~a~~~~d~-~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt  430 (1039)
T KOG0199|consen  378 VARETYDS-IEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVT  430 (1039)
T ss_pred             eeeeeccc-cCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceee
Confidence            34444444 45789999999999999987544338884 448899999998887

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=93.94  E-value=0.14  Score=30.74  Aligned_cols=38  Identities=26%  Similarity=0.500  Sum_probs=29.5

Q ss_pred             cccCCCCEEEEeeccCCC-eeEEEecCCCceeEEeCCcEE
Q psy13524        151 LTFQKGDIFFVHNELGDG-WLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       151 L~~~~gd~i~v~~~~~~~-w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      -.+..|+.+.++.....+ | ...+..++..||++..|++
T Consensus        17 ~~l~~g~~v~v~~~~~~~~W-~~V~~~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   17 GQLPKGEKVTVLGESGDGNW-YKVRTYDGKTGWVSSSYLS   55 (55)
T ss_dssp             EEEETTSEEEEEEEETT--E-EEEEEETTEEEEEEGGCEE
T ss_pred             EEEeCCCEEEEEEEcCCcEE-EEEECcCCcEEEEEccccC
Confidence            356788999999887655 8 7775558889999999874

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

>KOG3632|consensus

Probab=93.26  E-value=0.19  Score=47.31  Aligned_cols=82  Identities=18%  Similarity=0.367  Sum_probs=59.7

Q ss_pred             ccEEEEeeccCCC--C---CCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEeccCCCCCCCcCccccC
Q psy13524        133 KKRIVAILPYTKM--P---DTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHP  206 (235)
Q Consensus       133 ~~~~~a~~~~~~~--~---~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~  206 (235)
                      ...+.|.|+|.+=  .   -+.+|.+-.|+.|.|....| +|. ..+.+..|+.|.+|+|+|+.+.++.      .=..+
T Consensus       447 ~q~~~arySynPFegpNenpeaelpltAg~yiYiyGdmdEdgf-yegeL~dgrrglvPsnFVe~v~d~~------~~l~t  519 (1335)
T KOG3632|consen  447 AQPFTARYSYNPFEGPNENPEAELPLTAGYYIYIYGDMDEDGF-YEGELRDGRRGLVPSNFVEVVTDTK------ESLVT  519 (1335)
T ss_pred             cceEEEEEeccCCcCCCCCCccccccccceEEEEecCCCcccc-ceeeeecccccCCCchheEEeccch------hhccc
Confidence            4568899998871  1   24589999999999998765 566 8888889999999999999887641      12334


Q ss_pred             CCChHHHHHhhccCC
Q psy13524        207 ECTKNDAVDMLVKAG  221 (235)
Q Consensus       207 ~~~r~~ae~~l~~~~  221 (235)
                      .+.+++++.-|...+
T Consensus       520 ~lp~eq~d~~l~ps~  534 (1335)
T KOG3632|consen  520 RLPREQNDAPLPPSP  534 (1335)
T ss_pred             cCCcccccCCCCCCC
Confidence            556666665554443

>smart00287 SH3b Bacterial SH3 domain homologues

Probab=92.18  E-value=0.46  Score=29.24  Aligned_cols=37  Identities=27%  Similarity=0.348  Sum_probs=29.3

Q ss_pred             cccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcE
Q psy13524        151 LTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV  188 (235)
Q Consensus       151 L~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v  188 (235)
                      -.+..|+.+.++...+.+| ...+..+|..||++..++
T Consensus        25 ~~l~~g~~v~i~~~~~~~W-~~v~~~~g~~Gwi~~~~~   61 (63)
T smart00287       25 GTLKKGDKVKVLGVDGQDW-AKITYGSGQRGYVPGYVV   61 (63)
T ss_pred             EEecCCCEEEEEEccCCce-EEEEcCCCCEEEEEeeee
Confidence            4577899999998765589 888875699999987654

>KOG3565|consensus

Probab=91.99  E-value=0.052  Score=49.59  Aligned_cols=58  Identities=21%  Similarity=0.396  Sum_probs=48.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEe-cCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTA-HRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~-~~~~~~G~~P~~~v~~~  191 (235)
                      ....+.|+|.|.+ ..++.++...|+++.++... .+|| -.++ ..++..|.+|.+|+...
T Consensus       577 ~~~~~~a~~~~~~-~s~~~~si~~~~il~~ie~~~g~gw-t~~r~~~~~~~g~~Ptsyl~~~  636 (640)
T KOG3565|consen  577 PIRTSKALYAFEG-QSEGTISIDPGEILQVIEEDKGDGW-TRGRLEPNGEKGYVPTSYLDVT  636 (640)
T ss_pred             CccceecccCcCC-CCCCccccCcchhHHHHhhcccCCC-CCCCCCCCCcCCCCCccccccc
Confidence            4567889999999 89999999999999998876 5677 6666 34888999999999765

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=90.80  E-value=0.22  Score=39.41  Aligned_cols=31  Identities=16%  Similarity=0.155  Sum_probs=23.6

Q ss_pred             ccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        202 DWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       202 ~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      |-|+ +++-.+|++.|.+...|.++||+|+..
T Consensus        39 P~F~-n~~~~qAe~~L~~~~~Ge~iIRPSSkG   69 (220)
T PF14633_consen   39 PLFK-NFNYKQAEEYLADQDVGEVIIRPSSKG   69 (220)
T ss_dssp             TTEE-SS-HHHHHHHHCCS-TT-EEEEE-TTT
T ss_pred             CCcc-CCCHHHHHHHHhcCCCCCEEEeeCCCC
Confidence            4465 899999999999999999999999864

>KOG3812|consensus

Probab=90.05  E-value=0.14  Score=42.54  Aligned_cols=52  Identities=17%  Similarity=0.417  Sum_probs=40.3

Q ss_pred             cEEEEeeccCCCCCC------CCcccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCC
Q psy13524        134 KRIVAILPYTKMPDT------DELTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRD  186 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~------~eL~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~  186 (235)
                      ..+++..+|.+..++      ..++|...|.+.|-++-+++| |-|++.  .+..||+|+.
T Consensus        59 FAV~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDW-WIGRlVkeg~e~gFiPsp  118 (475)
T KOG3812|consen   59 FAVRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDW-WIGRLVKEGCEIGFIPSP  118 (475)
T ss_pred             EEEEeccccCCccCCCCCCCCceeeeccccceeehhhcccch-hHHHHhhcCCccccccch
Confidence            345677788873222      258999999999999999999 999876  5568999973

>KOG1856|consensus

Probab=89.52  E-value=1.1  Score=43.27  Aligned_cols=109  Identities=22%  Similarity=0.400  Sum_probs=69.1

Q ss_pred             eEEeecCCCCCCEEEEEEECC-EEeEEEEEeeCC-------e-EEcCCcccCCHHHHHHHhhhCCc--------------
Q psy13524          2 FLVRPSDNSPGDYSLFFHINN-QIQRFRIEKKAV-------R-YLMGGRTFECLDAVINRYRKEQI--------------   58 (235)
Q Consensus         2 FLvR~s~~~~g~~~lsv~~~~-~v~h~~I~~~~~-------~-~~~~~~~F~sl~eLi~~y~~~~~--------------   58 (235)
                      ++||.|++.....+++++..+ .-.|+-|...+.       + ...++..|..|.|+|.-|-+.-.              
T Consensus      1131 ~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e~feDLDEiI~r~vqpm~~~~~em~nhkyf~~ 1210 (1299)
T KOG1856|consen 1131 LIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGEEFEDLDEIIARYVQPMATNLREMTNHKYFFT 1210 (1299)
T ss_pred             EEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCcccccHHHHHHHHHHHHHHHHHHHHhhhHhhc
Confidence            689999876666777777654 568898865432       1 46788999999999988844110              


Q ss_pred             ccc---eee------------CC--ccccCCCceeecc-------eEEEEEeecCeeEeeeEEEcchhhhhhcccc
Q psy13524         59 VEG---HTL------------GF--PVTRINLGIFIPS-------AIFRVTAVCGDFYIGGRQFDSLSDLISYYSS  110 (235)
Q Consensus        59 ~~~---~~L------------~~--p~~~~~~~~~l~~-------~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~  110 (235)
                      |..   -.+            .+  .+.+..+||++..       .|.-+.-....+.+-+..|+++.+|..+++.
T Consensus      1211 Gt~~~~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~~k~~heyv~v~p~g~~~rg~~f~tld~L~~~FK~ 1286 (1299)
T KOG1856|consen 1211 GTKKEVEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPSSKPRHEYVKVVPEGFRFRGQNFGTLDELCRWFKR 1286 (1299)
T ss_pred             CCHHHHHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccCCCccceeEEEcccceEEecccchhHHHHHHHHHH
Confidence            100   000            00  1112278888753       3333333334455569999999999988875

>PRK10884 SH3 domain-containing protein; Provisional

Probab=88.92  E-value=0.64  Score=36.43  Aligned_cols=40  Identities=10%  Similarity=0.033  Sum_probs=32.9

Q ss_pred             cccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEec
Q psy13524        151 LTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       151 L~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      -.+..|+.++|++..+ .+| ...+..+|+.||++..|+...
T Consensus        48 ~~l~~G~~v~vl~~~~~~~w-~~Vr~~~G~~GWV~~~~Ls~~   88 (206)
T PRK10884         48 GTLNAGEEVTLLQVNANTNY-AQIRDSKGRTAWIPLKQLSTT   88 (206)
T ss_pred             EEEcCCCEEEEEEEcCCCCE-EEEEeCCCCEEeEEHHHhcCC
Confidence            4577899999998765 578 788776899999999998754

>KOG1856|consensus

Probab=88.60  E-value=0.89  Score=43.83  Aligned_cols=52  Identities=15%  Similarity=0.375  Sum_probs=46.7

Q ss_pred             ecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCC
Q psy13524          6 PSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQ   57 (235)
Q Consensus         6 ~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~   57 (235)
                      -|...||.|.||.+.+.+++|--|.-...+|...++-|.++.+|+.|++.+.
T Consensus      1237 ~s~~~PG~F~L~y~~~~k~~heyv~v~p~g~~~rg~~f~tld~L~~~FK~h~ 1288 (1299)
T KOG1856|consen 1237 ASHEHPGKFCLSYKPSSKPRHEYVKVVPEGFRFRGQNFGTLDELCRWFKRHY 1288 (1299)
T ss_pred             ecccCCceEEEEeccCCCccceeEEEcccceEEecccchhHHHHHHHHHHHh
Confidence            4556799999999999999999888888889899999999999999999865

>KOG0040|consensus

Probab=84.02  E-value=0.032  Score=54.44  Aligned_cols=58  Identities=28%  Similarity=0.598  Sum_probs=52.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++.|+|+|.. .++.+.+.++||+++++......| |..+. +-+.|++|+.||+.+.+
T Consensus       968 ~~~v~alyd~q~-kSprev~mKkgDvltll~s~nkdw-wkve~-~d~qg~vpa~yvk~~~~ 1025 (2399)
T KOG0040|consen  968 KECVLALYDYQE-KSPREVTMKKGDVLTLLNSINKDW-WKVEV-NDRQGFVPAAYVKRLDP 1025 (2399)
T ss_pred             HHHHHHHHHHHh-cCHHHHHHhhhhHHHHHhhccccc-ccchh-hhhcCcchHHHHHHhcc
Confidence            355779999999 899999999999999999888899 99998 88899999999998764

>KOG4566|consensus

Probab=82.94  E-value=1.4  Score=35.60  Aligned_cols=57  Identities=23%  Similarity=0.433  Sum_probs=44.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE------EcCC--cccCCHHHHHHHhhhCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY------LMGG--RTFECLDAVINRYRKEQ   57 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~------~~~~--~~F~sl~eLi~~y~~~~   57 (235)
                      +||||+|...+-.+.|+++....-+-.+|...++.+      ....  ..|+....++++|+.-.
T Consensus        75 ~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~~sfr~ds~~~~~~pl~~~e~~~~~~~~y~~~~  139 (258)
T KOG4566|consen   75 TFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQDSSFRLDSSHRHTPPLISFEDVEVLIHHYRQSR  139 (258)
T ss_pred             ceeeecCcCccccceeEeeeccCCCCccccccccceecccccccCCCcccChhHHHHHHhhhhhh
Confidence            599999987776789999998888888888766532      1222  47999999999996544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	235
2gqi_A	71	Solution Structure Of The Sh3 Domain Of Human Ras G		2e-19
2j05_A	65	Crystal Structure Of The Rasgap Sh3 Domain At 1.5 A		7e-18
4fss_A	62	Crystal Structure Of A Ras P21 Protein Activator (R		7e-18
2gsb_A	119	Solution Structure Of The Second Sh2 Domain Of Huma		9e-16
3i35_A	60	Human Sh3 Domain Of Protein Lasp1 Length = 60		2e-05
2ci9_A	102	Nck1 Sh2-Domain In Complex With A Dodecaphosphopept		2e-04
2ci8_A	99	Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomple		2e-04
2b3o_A	532	Crystal Structure Of Human Tyrosine Phosphatase Shp		2e-04
3ps5_A	595	Crystal Structure Of The Full-Length Human Protein		2e-04

>pdb|2GQI|A Chain A, Solution Structure Of The Sh3 Domain Of Human Ras Gtpase- Activating Protein 1 Length = 71

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/58 (67%), Positives = 49/58 (84%)
Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           +R+ AILPYTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++
Sbjct: 8   RRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 65

>pdb|2J05|A Chain A, Crystal Structure Of The Rasgap Sh3 Domain At 1.5 Angstrom Resolution Length = 65

Iteration: 1
 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           ++R+ AILPYTK+PDTDE++F KGD F VHNEL DGW WVT  RT EQG+I  DLVE++
Sbjct: 5   RRRVRAILPYTKVPDTDEISFLKGDXFIVHNELEDGWXWVTNLRTDEQGLIVEDLVEEV 63

>pdb|4FSS|A Chain A, Crystal Structure Of A Ras P21 Protein Activator (Rasa1) From Homo Sapiens At 2.25 A Resolution Length = 62

Iteration: 1
 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           ++R+ AILPYTK+PDTDE++F KGD F VHNEL DGW WVT  RT EQG+I  DLVE++
Sbjct: 2   RRRVRAILPYTKVPDTDEISFLKGDXFIVHNELEDGWXWVTNLRTDEQGLIVEDLVEEV 60

>pdb|2GSB|A Chain A, Solution Structure Of The Second Sh2 Domain Of Human Ras Gtpase-Activating Protein 1 Length = 119

Iteration: 1
 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRI-EKKAVRYLMGGRTFECLDAVINRYRKEQIV 59
           SFLVRPSDN+PGDYSL+F  N  IQRF+I      +++MGGR +  +  +I+ YRKEQIV
Sbjct: 40  SFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIV 99
Query: 60  EGHTLGFPV 68
           EG+ L  PV
Sbjct: 100 EGYYLKEPV 108

>pdb|3I35|A Chain A, Human Sh3 Domain Of Protein Lasp1 Length = 60

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           KR  A+  Y+   D DE++FQ GD      ++ DGW++ T  RTG+ GM+  + VE
Sbjct: 4   KRYRAVYDYSA-ADEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYVE 58

>pdb|2CI9|A Chain A, Nck1 Sh2-Domain In Complex With A Dodecaphosphopeptide From Epec Protein Tir Length = 102

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 2  FLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI 58
          FL+R S++SP D+S+      + + F+++ K   Y +G R F  ++ ++  Y+K  I
Sbjct: 30 FLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRKFSTMEELVEHYKKAPI 86

>pdb|2CI8|A Chain A, Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomplexed Length = 99

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 2  FLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI 58
          FL+R S++SP D+S+      + + F+++ K   Y +G R F  ++ ++  Y+K  I
Sbjct: 26 FLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRKFSTMEELVEHYKKAPI 82

>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1 Length = 532

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
          SFL RPS  + GD+SL   + +Q+   RI+     Y L GG  F  L  ++  Y ++Q V
Sbjct: 26 SFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGV 85

>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein Tyrosine Phosphatase Shp-1 Length = 595

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
          SFL RPS  + GD+SL   + +Q+   RI+     Y L GG  F  L  ++  Y ++Q V
Sbjct: 26 SFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGV 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	235
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	2e-23
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	3e-22
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	3e-20
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	1e-04
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	5e-20
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	2e-08
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	5e-20
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	9e-17
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	2e-15
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	2e-14
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	3e-15
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	1e-12
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	1e-05
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	9e-15
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	4e-12
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-06
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	1e-14
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	1e-14
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	3e-14
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	3e-05
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	1e-13
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	5e-06
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	2e-13
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	3e-09
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	2e-13
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	1e-04
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	2e-13
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	6e-09
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	3e-13
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	7e-06
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	3e-13
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	6e-13
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	5e-06
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	1e-12
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	1e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-05
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	1e-12
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	5e-08
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	2e-12
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	2e-07
2dly_A	121	FYN-related kinase; BRK family kinase, structural	2e-12
2dly_A	121	FYN-related kinase; BRK family kinase, structural	1e-08
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	3e-12
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	2e-11
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	4e-08
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	1e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-05
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	6e-12
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	6e-12
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	2e-08
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	7e-12
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	2e-07
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	7e-12
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	3e-07
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	8e-12
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	8e-12
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	5e-06
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	1e-11
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	1e-11
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	1e-11
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	2e-11
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	3e-11
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	3e-11
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	5e-11
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	6e-08
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	8e-11
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	4e-07
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	1e-10
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	1e-10
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	1e-10
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	2e-10
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	2e-10
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	3e-10
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	4e-10
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	8e-08
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	6e-10
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	7e-07
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	1e-09
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	1e-09
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	1e-09
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	2e-09
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	2e-09
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	2e-09
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	3e-09
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	3e-09
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-09
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-07
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	9e-09
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	9e-09
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	1e-08
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	1e-08
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	1e-08
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	1e-08
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	1e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-06
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	2e-08
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	2e-08
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	2e-08
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	4e-05
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	2e-08
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	3e-08
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	4e-08
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	6e-08
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	7e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-07
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	9e-08
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	2e-05
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	9e-08
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	9e-08
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	1e-07
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	1e-07
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	1e-07
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	1e-07
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	1e-07
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	2e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-05
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	3e-07
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	3e-07
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	3e-07
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	3e-05
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	3e-07
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	6e-07
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	6e-07
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	7e-07
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	7e-07
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	1e-06
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	1e-06
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	1e-06
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	1e-06
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	3e-06
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	1e-06
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	1e-06
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	2e-06
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	4e-05
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	2e-06
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	2e-06
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	2e-06
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	2e-06
1awj_A	77	ITK; transferase, regulatory intramolecular comple	3e-06
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	4e-06
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	4e-06
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	4e-06
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	4e-06
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	5e-06
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	5e-06
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	6e-06
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	6e-06
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	6e-06
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	2e-05
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	7e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-06
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	8e-06
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	9e-06
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	9e-06
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	1e-05
1wxb_A	68	Epidermal growth factor receptor pathway substrate	1e-05
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	1e-05
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	1e-05
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	1e-05
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	2e-05
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	2e-05
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	2e-05
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	2e-05
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	2e-05
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	2e-05
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	2e-05
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	3e-05
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	3e-05
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	3e-05
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	4e-05
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	5e-05
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	5e-05
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	5e-05
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	5e-05
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	5e-05
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	6e-05
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	6e-05
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	8e-05
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	8e-05
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	9e-05
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	9e-05
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	9e-05
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	9e-05
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	9e-05
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	9e-05
1i07_A	60	Epidermal growth factor receptor kinase substrate	1e-04
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	1e-04
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	1e-04
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	1e-04
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	1e-04
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	1e-04
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	1e-04
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	1e-04
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	1e-04
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	2e-04
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	2e-04
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	2e-04
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	2e-04
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	2e-04
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	2e-04
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	2e-04
3u23_A	65	CD2-associated protein; structural genomics, struc	2e-04
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	2e-04
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	2e-04
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	3e-04
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	3e-04
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	3e-04
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	3e-04
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	3e-04
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	4e-04
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	4e-04
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	5e-04
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	5e-04
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	5e-04
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	5e-04
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	5e-04
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	6e-04
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	6e-04
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	6e-04
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	6e-04
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	7e-04
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	8e-04
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	8e-04
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	8e-04
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	9e-04
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	9e-04
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	9e-04

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 88.6 bits (220), Expect = 2e-23
 Identities = 39/59 (66%), Positives = 50/59 (84%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           ++R+ AILPYTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++
Sbjct: 5   RRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 63

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 85.4 bits (212), Expect = 3e-22
 Identities = 39/60 (65%), Positives = 49/60 (81%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
           +R+ AILPYTK+PDTDE++F KGD+F VHNEL DGW+WVT  RT EQG+I  DLVE++  
Sbjct: 8   RRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVSG 67

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 86.2 bits (212), Expect = 3e-20
 Identities = 42/211 (19%), Positives = 67/211 (31%), Gaps = 42/211 (19%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
            FLVR S  SPGDY L    N+++  + I                               
Sbjct: 34  VFLVRDSSTSPGDYVLSVSENSRVSHYIINS----------------------------S 65

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCS----DLLK 116
           G     P +                       IG ++FDSL  L+ +Y         L++
Sbjct: 66  GPRPPVPPSPAQ---------PPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIE 116

Query: 117 RERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR 176
               +          ++   V  L      D ++L F+KGDI  + ++  + W W     
Sbjct: 117 PVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQW-WNAEDS 175

Query: 177 TGEQGMIFRDLVEDLDETIDPNTVFDWFHPE 207
            G++GMI    VE         +     + E
Sbjct: 176 EGKRGMIPVPYVEKYRPASASVSALIGGNQE 206

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 41.5 bits (96), Expect = 1e-04
 Identities = 15/95 (15%), Positives = 26/95 (27%), Gaps = 3/95 (3%)

Query: 100 SLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIF 159
             S              +  +  P P  +      R++         D   L  + G++ 
Sbjct: 206 EGSHPQPLGGPEPGPYAQPSVNTPLPNLQNGPIYARVIQKRVP-NAYDKTALALEVGELV 264

Query: 160 FVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDET 194
            V      G  W      G++G      V  LD+ 
Sbjct: 265 KVTKINVSGQ-W-EGECNGKRGHFPFTHVRLLDQQ 297

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 81.2 bits (201), Expect = 5e-20
 Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIV 59
           SFLVRPSDN+PGDYSL+F  N  IQRF+I       ++MGGR +  +  +I+ YRKEQIV
Sbjct: 40  SFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIV 99

Query: 60  EGHTLGFPVTR 70
           EG+ L  PV  
Sbjct: 100 EGYYLKEPVPM 110

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 89  GDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEP 129
             F +GGR ++S+ D+I +Y     +     L  P P  + 
Sbjct: 74  NQFMMGGRYYNSIGDIIDHYRKEQIVEGY-YLKEPVPMQDQ 113

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 84.2 bits (207), Expect = 5e-20
 Identities = 44/237 (18%), Positives = 72/237 (30%), Gaps = 46/237 (19%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
            FLVR S  SPGDY L    N+++  + I     R                         
Sbjct: 36  VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRP------------------------ 71

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSD----LLK 116
                         +    A            IG ++FDSL  L+ +Y         L++
Sbjct: 72  -------------PVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIE 118

Query: 117 RERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR 176
               +          ++   V  L      D ++L F+KGDI  + ++  + W W     
Sbjct: 119 PVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQW-WNAEDS 177

Query: 177 TGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            G++GMI    VE       P +          +  +    +           S +T
Sbjct: 178 EGKRGMIPVPYVEK----YRPASASVSALIGGNQEGSHPQPLGGPEPGPYAQPSVNT 230

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 76.6 bits (187), Expect = 9e-17
 Identities = 39/234 (16%), Positives = 68/234 (29%), Gaps = 46/234 (19%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIV 59
            FLVR S   PGDY L    N+++  + I     R + +G + F+ L A++  Y+   + 
Sbjct: 35  MFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLD 94

Query: 60  EGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRER 119
               +       +                                               
Sbjct: 95  TTTLIEPAPRYPS--------------------------------------------PPM 110

Query: 120 LAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGE 179
            +   P      D    V  L      D ++L F+KG+I  +  +  + W W   ++ G 
Sbjct: 111 GSVSAPNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQW-WSARNKDGR 169

Query: 180 QGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
            GMI    VE L  +       +         +      +        + S S 
Sbjct: 170 VGMIPVPYVEKLVRSSPHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSP 223

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 71.5 bits (175), Expect = 2e-15
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FLVR   N P  Y++ F    +I+  R++++    ++G   F+ L  +I+ Y K  +  
Sbjct: 146 AFLVRKR-NEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYR 204

Query: 61  GHTLGFPVTR 70
              L +P+  
Sbjct: 205 KMKLRYPINE 214

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 69.2 bits (169), Expect = 2e-14
 Identities = 37/178 (20%), Positives = 55/178 (30%), Gaps = 53/178 (29%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-----YLMGGRTFECLDAVINRY-- 53
           SFLVR S+   GDY+L F  N ++Q  RI  +        +L     F+ L  +I  Y  
Sbjct: 38  SFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQ 97

Query: 54  ----RKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVC-------------------GD 90
                 E  +                +  +++ R  A                       
Sbjct: 98  VPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS 157

Query: 91  F----------------------YIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPP 126
           +                       +G  +FDSL DLISYY       K  +L +P   
Sbjct: 158 YAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYRKM-KLRYPINE 214

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 71.5 bits (175), Expect = 3e-15
 Identities = 37/234 (15%), Positives = 63/234 (26%), Gaps = 74/234 (31%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
            +L+R S N  G ++L      +   + IE++                         I  
Sbjct: 30  LYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY-------------------AIAG 70

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
           G T                                    S +DL  Y+S  SD L    L
Sbjct: 71  GRT----------------------------------HASPADLCHYHSQESDGLVC-LL 95

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQ 180
             P   P+ V  K                  T    D+            W    +  EQ
Sbjct: 96  KKPFNRPQGVQPK------------------TGPFEDLKENLIREYVKQTWNLQGQALEQ 137

Query: 181 GMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVN--FTISESDS 232
            +I +    +       +    WFH + ++ ++  +++     N  F I   D+
Sbjct: 138 AIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDN 191

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 64.6 bits (157), Expect = 1e-12
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
            FL+R  D + G Y+L      ++  +RI+K       +  G+ F+ L  ++  Y  +  
Sbjct: 183 KFLIRARD-NNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKAD 241

Query: 59  VEGHTLGFPVTRI 71
                L  P  +I
Sbjct: 242 GLLRVLTVPCQKI 254

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 89  GDFYI-GGRQFDSLSDLISYYSSCSDLLKRERLAHPCP 125
           G   I  G++FD+L  L+ +YS  +D L R  L  PC 
Sbjct: 216 GKLSIPEGKKFDTLWQLVEHYSYKADGLLR-VLTVPCQ 252

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 69.7 bits (170), Expect = 9e-15
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 88  CGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPD 147
            G +++   +F+SL++L+ Y+ S S    ++         E V  +   V  L      +
Sbjct: 115 AGKYFLWVVKFNSLNELVDYHRSTSVSRNQQI---FLRDIEQVPQQPTYVQALFDFDPQE 171

Query: 148 TDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETI 195
             EL F++GD   V +     W W      G+ GM  R+ V  ++  +
Sbjct: 172 DGELGFRRGDFIHVMDNSDPNW-W-KGACHGQTGMFPRNYVTPVNRNV 217

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 62.4 bits (151), Expect = 4e-12
 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDET 194
             +A   +      DEL+F++GDI  V NE  D   W  A   G+ G I ++ +E     
Sbjct: 2   EAIAKYDFKA-TADDELSFKRGDILKVLNEECDQN-WYKAELNGKDGFIPKNYIEMKPH- 58

Query: 195 IDPNTVFDWFHPECTKNDAVDMLVKAGPV-NFTISESDST 233
                   WF  +  +  A +ML K      F I ES+S 
Sbjct: 59  -------PWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA 91

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGRTFECLDAVINRYRKEQIV 59
           +FL+R S+++PGD+SL     N +Q F++ +    +Y +    F  L+ +++ +R   + 
Sbjct: 82  AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS 141

Query: 60  EGHTLGFPVTRIN 72
               +        
Sbjct: 142 RNQQIFLRDIEQV 154

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 65.5 bits (160), Expect = 1e-14
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFV-HNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
            +++  I P+T   +   L+F +GD+  +   E  DGWL+     T  +G       + L
Sbjct: 7   GQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLL 66

Query: 192 DE 193
             
Sbjct: 67  SG 68

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 66.8 bits (163), Expect = 1e-14
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 19/88 (21%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA------------------VRYLMGGRT 42
            FLVR S  SPGDY L    N+++  + I                       R  +G + 
Sbjct: 23  VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQE 82

Query: 43  FECLDAVINRYRKEQIVEGHTLGFPVTR 70
           F+ L A++  Y+   +    TL  PV+R
Sbjct: 83  FDSLPALLEFYKIHYLDT-TTLIEPVSR 109

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 65.3 bits (160), Expect = 3e-14
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGRTFECLDAVINRYRKEQIV 59
           F++R S +SPGD+S+     + +Q F++ +     Y +    F  L+ +++ YR   I 
Sbjct: 32 FFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSIS 91

Query: 60 EGHTL 64
          +   +
Sbjct: 92 KQKQV 96

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 8/32 (25%), Positives = 19/32 (59%)

Query: 89  GDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
           G++++   +F SL+ L+ YY + S   +++  
Sbjct: 66  GNYFLWTEKFPSLNKLVDYYRTTSISKQKQVF 97

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGRTFECLDAVINRYRKEQIV 59
          +FL+R S+++PGD+SL     N +Q F++ +    +Y +    F  L+ +++ +R   + 
Sbjct: 27 AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS 86

Query: 60 EGHTL 64
              +
Sbjct: 87 RNQQI 91

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 8/31 (25%), Positives = 19/31 (61%)

Query: 88  CGDFYIGGRQFDSLSDLISYYSSCSDLLKRE 118
            G +++   +F+SL++L+ Y+ S S    ++
Sbjct: 60  AGKYFLWVVKFNSLNELVDYHRSTSVSRNQQ 90

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV- 59
            FLVR S   PG+Y L  + + Q + F I+     Y   G  F  +  +I+ +   + V 
Sbjct: 38  DFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLIDHHYTTKQVI 97

Query: 60  ---EGHTLGFPVTR 70
               G  L  P+ +
Sbjct: 98  TKKSGVVLLNPIPK 111

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRE---RLAHPCPPPE 128
           F +  V   +   G  F ++  LI ++ +   ++ ++    L +P P  +
Sbjct: 64  FIIQYVDNMYRFEGTGFSNIPQLIDHHYTTKQVITKKSGVVLLNPIPKDK 113

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 63.5 bits (155), Expect = 2e-13
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-VRYLMGGRTFECLDAVINRYRKEQIV 59
            FLVR S+   G+  L F+   + +  R+   A  +  +    F+ +  ++  +R   I 
Sbjct: 35  VFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHFRVHPIP 94

Query: 60  EGHTLGFPVTRINLGIFIPS 79
                   V    L  ++PS
Sbjct: 95  LESGGSSDVV---LVSYVPS 111

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 5/42 (11%)

Query: 89  GDFYIGGRQFDSLSDLISYYSSCSDLLKRE-----RLAHPCP 125
           G   +    F S+ D++ ++      L+        L    P
Sbjct: 69  GQCRVQHLHFQSIFDMLEHFRVHPIPLESGGSSDVVLVSYVP 110

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
           +FL+R  +     Y++ F    +++  RI +    + L     FE L  +++ Y K  + 
Sbjct: 43  AFLIRKRE-GTDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYEKHALY 101

Query: 60  EGHTLGFPVTR 70
               L +PVT 
Sbjct: 102 RKMRLRYPVTP 112

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 51.9 bits (125), Expect = 6e-09
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 82  FRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCPP 126
            R+      F +G    F+SL +L+SYY   +   K  RL +P  P
Sbjct: 68  CRINRDGRHFVLGTSAYFESLVELVSYYEKHALYRKM-RLRYPVTP 112

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 12/80 (15%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
           ++L+R        +++    N++++  ++ +K     +   + F+ L  ++  Y+   + 
Sbjct: 39  TYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHSLK 98

Query: 60  EG-----HTLGFPVTRINLG 74
           E       TL +P +  + G
Sbjct: 99  ESFKQLDTTLKYPYSGPSSG 118

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 82  FRVTAVCGDFYI-GGRQFDSLSDLISYYSSCSDLLKRE----RLAHPCPPPE 128
            +V       +I   ++FDSL +L+ YY   S     +     L +P   P 
Sbjct: 65  IKVVEKDNWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYSGPS 116

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 63.1 bits (154), Expect = 3e-13
 Identities = 23/129 (17%), Positives = 32/129 (24%), Gaps = 49/129 (37%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           SFLVR S++    Y+L     N +  +RI                               
Sbjct: 34  SFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFT---------------------- 71

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
                                     V     +  R F  L  LI +Y   +  L    L
Sbjct: 72  --------------------------VQASEGVSMRFFTKLDQLIEFYKKENMGLVT-HL 104

Query: 121 AHPCPPPEP 129
            +P P  E 
Sbjct: 105 QYPVPLEEE 113

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 61.9 bits (151), Expect = 6e-13
 Identities = 17/61 (27%), Positives = 33/61 (54%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           FL+R S++SP D+S+    + + + F+++     Y +G R F  +D ++  Y+K  I  
Sbjct: 29 DFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAPIFT 88

Query: 61 G 61
           
Sbjct: 89 S 89

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 43.0 bits (102), Expect = 5e-06
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPV 130
           F+V  V   + IG R+F ++ +L+ +Y      +              +
Sbjct: 55  FKVQLVDNVYCIGQRRFHTMDELVEHYKKAP--IFTSEHGEKLYLVRAL 101

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 61.5 bits (150), Expect = 1e-12
 Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGRTFECLDAVINRYRKEQIV 59
           +FL+R S+++PGD+SL     N +Q F++ +    +Y +    F  L+ +++ +R   + 
Sbjct: 30  AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS 89

Query: 60  EGHTLGFPVTR 70
               +      
Sbjct: 90  RNQQIFLRDIE 100

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 88  CGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDK 133
            G +++   +F+SL++L+ Y+ S S    + ++        P    
Sbjct: 63  AGKYFLWVVKFNSLNELVDYHRSTSVSRNQ-QIFLRDIEQVPQQPT 107

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 6/111 (5%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
                   ND    VA+  +    D + L+  KG+   V     +G  W  A     QG 
Sbjct: 33  NLLAGPSENDPNLFVALYDFVASGD-NTLSITKGEKLRVLGYNHNGE-WCEAQTKNGQGW 90

Query: 183 IFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
           +  + +     +++      W+H   ++N A  +L      +F + ES+S+
Sbjct: 91  VPSNYIT-PVNSLEK---HSWYHGPVSRNAAEYLLSSGINGSFLVRESESS 137

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
           SFLVR S++SPG  S+      ++  +RI   +    Y+     F  L  +++ +     
Sbjct: 128 SFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVAD 187

Query: 59  VEGHTLGFPVTRIN 72
               TL +P  + N
Sbjct: 188 GLITTLHYPAPKRN 201

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 12/81 (14%)

Query: 89  GDFYI-GGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPD 147
           G  Y+    +F++L++L+ ++S+ +D L    L +P P                Y   P+
Sbjct: 162 GKLYVSSESRFNTLAELVHHHSTVADGLIT-TLHYPAPKRNK---------PTIYGVSPN 211

Query: 148 TDELTFQKGDIFFVHNELGDG 168
            D+   ++ DI    ++LG G
Sbjct: 212 YDKWEMERTDITMK-HKLGGG 231

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 62.8 bits (152), Expect = 1e-12
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQ 180
               PP  P+     ++A+  Y    D  +L F+KG+   +  + G+ W    +  TG++
Sbjct: 1   GGSNPPASPL-QDNLVIALHSYEPSHD-GDLGFEKGEQLRILEQSGE-WWKAQSLTTGQE 57

Query: 181 GMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVN--FTISESDST 233
           G I      +     +      WF    ++ DA   L+  G  +  F I ES+ST
Sbjct: 58  GFI----PFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESEST 108

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 50.5 bits (120), Expect = 5e-08
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-------YLMGGRTFECLDAVINRY 53
           SFL+R S+++ G +SL     +Q Q   ++   +R       Y+    TF  L  ++  Y
Sbjct: 99  SFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHY 158

Query: 54  RKEQIVEGHTLGFPVT 69
                     L  P  
Sbjct: 159 TNASDGLCTRLSRPCQ 174

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEK-KAVRYLMGGRTFECLDAVINRYRKEQIV 59
            FLVR S   PGDY L    N+++  + I      R+ +G + F+ L A++  Y+   + 
Sbjct: 42  MFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLD 101

Query: 60  EGHTLGFPVTR 70
              TL  P  R
Sbjct: 102 T-TTLIEPAPR 111

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 82  FRVTAVC-GDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCP 125
           + + ++    F IG ++FD L  L+ +Y           L  P P
Sbjct: 68  YIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLDTT--TLIEPAP 110

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 61.5 bits (150), Expect = 2e-12
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
           +FL+R S++  GD+SL       ++ +RI +      +L   + F  L+  +N Y     
Sbjct: 41  AFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNYYTTTSD 100

Query: 59  VEGHTLGFPVTRIN 72
                L  P  +I 
Sbjct: 101 GLCVKLEKPCLKIQ 114

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 89  GDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCPPPEP 129
           G F++  R  F +L++ ++YY++ SD L   +L  PC   + 
Sbjct: 75  GGFFLTRRKVFSTLNEFVNYYTTTSDGLCV-KLEKPCLKIQV 115

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 63.4 bits (154), Expect = 3e-12
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
            FL+RP     G Y+L       +  + I +       +  G  F+ L  ++   + +  
Sbjct: 184 KFLLRPRK-EQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKAD 242

Query: 59  VEGHTLGFPV 68
              + L    
Sbjct: 243 GLIYCLKEAC 252

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 61.1 bits (148), Expect = 2e-11
 Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 22/148 (14%)

Query: 88  CGDFYI-GGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMP 146
            G + I GG+     ++L  +YS   D L    L  PC  P  +  +  +   L    + 
Sbjct: 64  NGTYAIAGGKAHCGPAELCEFYSRDPDGLPC-NLRKPCNRPSGLEPQPGVFDCLRDAMVR 122

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHP 206
           D                       W       EQ +I +    +       +    W+H 
Sbjct: 123 DYVR------------------QTWKLEGEALEQAIISQAPQVEKLIATTAHERMPWYHS 164

Query: 207 ECTKNDAVDMLVKAGPVN--FTISESDS 232
             T+ +A   L      +  F +     
Sbjct: 165 SLTREEAERKLYSGAQTDGKFLLRPRKE 192

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 51.4 bits (123), Expect = 4e-08
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
            FL+R    S G Y L    + +   F IE++      + GG+       +   Y ++  
Sbjct: 31  LFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPD 90

Query: 59  VEGHTLGFPVTR 70
                L  P  R
Sbjct: 91  GLPCNLRKPCNR 102

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 89  GDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCP 125
           G + I    +FD+L  L+ Y    +D L    L   CP
Sbjct: 217 GKYCIPEGTKFDTLWQLVEYLKLKADGLIY-CLKEACP 253

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 126 PPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFR 185
                      +A   +    +  +L F KGD+  +     D   +   ++ G +G+I  
Sbjct: 4   IQASWPSGTECIAKYNFHGTAE-QDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPA 62

Query: 186 DLVE--DLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST 233
           + V+  +  +     ++  WFH + T+  A  +L       F + ES + 
Sbjct: 63  NYVQKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNY 112

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIV 59
            FLVR S N PGDY+L      +++ +RI   A +  +     FE L  ++  Y  +   
Sbjct: 103 LFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADG 162

Query: 60  EGHTLGFPVTR 70
               L  P   
Sbjct: 163 LCTRLIKPKVM 173

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 13/88 (14%)

Query: 82  FRVTAVCGDFYIG-GRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAIL 140
           +R+        I     F++L  L+ +Y++ +D L   RL  P      V          
Sbjct: 129 YRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLCT-RLIKPKVMEGTV---------- 177

Query: 141 PYTKMPDTDELTFQKGDIFFVHNELGDG 168
                           ++  +   +G G
Sbjct: 178 AAQDEFYRSGWALNMKELKLLQ-TIGKG 204

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 61.3 bits (148), Expect = 6e-12
 Identities = 12/96 (12%), Positives = 31/96 (32%), Gaps = 8/96 (8%)

Query: 88  CGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPD 147
                I  + F  +  L++++                         + +V    +T    
Sbjct: 79  AAGVKIANQSFPDIPALLNHFKMRVLTE------ASLLAAYKKPIIEVVVGTFKFTG-ER 131

Query: 148 TDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
             +L F++G+   + ++    W W   +  G  G++
Sbjct: 132 ETDLPFEQGERLEILSKTNQDW-WEARNALGTTGLV 166

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
            FLVR S N PGDY+L    + +++ +RI   A +  +     FE L  ++  Y  +   
Sbjct: 31  LFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADG 90

Query: 60  EGHTLGFPVTRIN 72
               L  P     
Sbjct: 91  LCTRLIKPKVMEG 103

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 82  FRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPV 130
           +R+        I     F++L  L+ +Y+S +D L   RL  P      V
Sbjct: 57  YRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCT-RLIKPKVMEGTV 105

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 59.6 bits (145), Expect = 7e-12
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
           SFLVR S++SPG  S+      ++  +RI   A    Y+     F  L  +++ +     
Sbjct: 39  SFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTVAD 98

Query: 59  VEGHTLGFPVTRIN 72
               TL +P  + N
Sbjct: 99  GLVTTLHYPAPKCN 112

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 89  GDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCPPPEP 129
           G  Y+    +F +L++L+ ++S+ +D L    L +P P    
Sbjct: 73  GKVYVTAESRFSTLAELVHHHSTVADGLVT-TLHYPAPKCNK 113

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 59.2 bits (144), Expect = 7e-12
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-VRYLMGGRTFECLDAVINRYR----- 54
           SFL RPS ++PGD++L    N  +   +I+       L GG  F  L  ++  Y      
Sbjct: 31  SFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQ 90

Query: 55  -KEQIVEGHTLGFPVTRIN 72
            KE+  +   L +P+   +
Sbjct: 91  LKEKNGDVIELKYPLNCAD 109

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 82  FRVTAVCGDFYI-GGRQFDSLSDLISYYSSCSDLLKRE-----RLAHPCPPPE 128
            ++      + + GG +F +L++L+ YY      LK +      L +P    +
Sbjct: 57  IKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCAD 109

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 59.2 bits (144), Expect = 8e-12
 Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 50/125 (40%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
            FL+R S ++P  + L    + +I+ F+I          G+TF  LD             
Sbjct: 30  LFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCED----DGQTFFSLDD------------ 73

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
                                            G  +F  L  L+ +Y     +L   +L
Sbjct: 74  ---------------------------------GNTKFSDLIQLVDFYQLNKGVLPC-KL 99

Query: 121 AHPCP 125
            H C 
Sbjct: 100 KHHCI 104

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 58.8 bits (143), Expect = 8e-12
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 5/75 (6%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV- 59
            FLVR S  +PG Y L    + Q +   +             FE +  +I+ +    +  
Sbjct: 28  DFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPI 87

Query: 60  ----EGHTLGFPVTR 70
                   L  PV R
Sbjct: 88  ISAGSELCLQQPVER 102

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 43.0 bits (102), Expect = 5e-06
 Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 4/48 (8%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRE----RLAHPCP 125
             +    G       +F+S+S LISY+      +        L  P  
Sbjct: 54  LLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVE 101

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLM------GGRTFECLDAVINRYR 54
            FLVR S  +P  + L      +++ + I        +      G   F  L  ++  ++
Sbjct: 39  LFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQ 98

Query: 55  KEQIVEGHTLGFPVTRINL 73
             + +    L    TR+ L
Sbjct: 99  LNRGILPCLLRHCCTRVAL 117

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 59.9 bits (145), Expect = 1e-11
 Identities = 25/131 (19%), Positives = 37/131 (28%), Gaps = 52/131 (39%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FLVR S+  P DY+L F  + ++Q  RI                              E
Sbjct: 52  TFLVRESETFPNDYTLSFWRSGRVQHCRIRSTM--------------------------E 85

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLK--RE 118
              + +                        +      F+S+  LI +Y            
Sbjct: 86  NGVMKY------------------------YLTDNLTFNSIYALIQHYREAHLRCAEFEL 121

Query: 119 RLAHPCPPPEP 129
           RL  P P P P
Sbjct: 122 RLTDPVPNPNP 132

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 57.3 bits (139), Expect = 1e-11
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
               A+  Y    + DEL  ++GD   V  +  DGW    + RT + G  
Sbjct: 8   TPYRAMYQYRP-QNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTF 56

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 6/76 (7%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA------VRYLMGGRTFECLDAVINRYR 54
            FLVR S ++P  + L      +I+ F+I               G   F  L  ++  Y+
Sbjct: 51  VFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVEFYQ 110

Query: 55  KEQIVEGHTLGFPVTR 70
             + V    L     R
Sbjct: 111 LNKGVLPCKLKHYCAR 126

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 57.9 bits (140), Expect = 3e-11
 Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 5/95 (5%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
              P          VA+  Y     T++L+F+KG+ F + N     W    +  TG+ G 
Sbjct: 17  SSYPTGLTGGVTIFVALYDYEAR-TTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGY 75

Query: 183 IFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDML 217
           I  + V       D     +W+  +  + DA    
Sbjct: 76  IPSNYVVP----ADSIQAEEWYFGKMGRKDAESGP 106

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 57.8 bits (140), Expect = 3e-11
 Identities = 17/133 (12%), Positives = 31/133 (23%), Gaps = 49/133 (36%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           S+L+R S++ PG Y L    +  I  +R+ +                             
Sbjct: 28  SYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWS---------------------- 65

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
                                           +  R F  + +LIS +      +    L
Sbjct: 66  --------------------------AETAPGVHKRYFRKIKNLISAFQKPDQGIVI-PL 98

Query: 121 AHPCPPPEPVNDK 133
            +P          
Sbjct: 99  QYPVEKKSSARST 111

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 56.8 bits (138), Expect = 5e-11
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
          +FL+R S+    DY L       ++ ++I ++A    +L    +F  L  ++N +R + +
Sbjct: 27 AFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSL 86

Query: 59 VEGHTLGFPVTR 70
            G  L  P  +
Sbjct: 87 SHGLRLAAPCRK 98

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 89  GDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCPPPE 128
           G  ++     F SL +L++Y+ + S      RLA PC   E
Sbjct: 61  GRLHLNEAVSFLSLPELVNYHRAQSLSHGL-RLAAPCRKHE 100

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 56.0 bits (136), Expect = 8e-11
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGR-TFECLDAVINRYRKEQIV 59
           FLVR S   PGDY L       +  +R+  +     +     F  L  ++  Y K++  
Sbjct: 28 LFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGA 87

Query: 60 EGHTLGFPVTR 70
              L  P  +
Sbjct: 88 ICTKLVRPKRK 98

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 82  FRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCP 125
           +RV    G   I     F +L D++ +YS     +   +L  P  
Sbjct: 54  YRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICT-KLVRPKR 97

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 25/126 (19%), Positives = 40/126 (31%), Gaps = 52/126 (41%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           SFL+R S+++ G +SL                        +       V+  Y+      
Sbjct: 37  SFLIRESESNKGAFSLSV----------------------KDITTQGEVVKHYK------ 68

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRER 119
                               I  +    G +YI  R  F +L  L+ +YS   D L + +
Sbjct: 69  --------------------IRSLD--NGGYYISPRITFPTLQALVQHYSKKGDGLCQ-K 105

Query: 120 LAHPCP 125
           L  PC 
Sbjct: 106 LTLPCV 111

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 11/51 (21%), Positives = 20/51 (39%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
             +  A   +     + EL  +KGDI F+  +   GW         ++G +
Sbjct: 2   DPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWV 52

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 59.1 bits (142), Expect = 1e-10
 Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 8/126 (6%)

Query: 88  CGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPD 147
                I  + F  +  L++++            A+  P  E V      V    +T    
Sbjct: 108 AAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKPIIEVV------VGTFKFTG-ER 160

Query: 148 TDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPE 207
             +L F++G+   + ++    W W   +  G  G++  + V+   E  +  T        
Sbjct: 161 ETDLPFEQGERLEILSKTNQDW-WEARNALGTTGLVPANYVQIQMEFHNDRTSKGASQSS 219

Query: 208 CTKNDA 213
              +  
Sbjct: 220 IGSSGG 225

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 18/125 (14%), Positives = 31/125 (24%), Gaps = 49/125 (39%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           S+L+R S++ PG Y L    +  I  +R+          G                    
Sbjct: 28  SYLLRDSESVPGVYCLCVLYHGYIYTYRV-----SQTETGSWS----------------- 65

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
                                           +  R F  + +LIS +      +    L
Sbjct: 66  --------------------------AETAPGVHKRYFRKIKNLISAFQKPDQGIVI-PL 98

Query: 121 AHPCP 125
            +P  
Sbjct: 99  QYPVE 103

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 51/130 (39%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +F+VR S    G Y++                +V       T    +A I  Y+      
Sbjct: 40  AFIVRDSR-HLGSYTI----------------SVFMGARRST----EAAIKHYQ------ 72

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRER 119
                               I +     G +Y+  R  F S+ +LI Y+   +  L   R
Sbjct: 73  --------------------IKK--NDSGQWYVAERHAFQSIPELIWYHQHNAAGLMT-R 109

Query: 120 LAHPCPPPEP 129
           L +P      
Sbjct: 110 LRYPVGLMGS 119

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
              VA+  Y+     +EL  QKG+   V  +  DGWL   +  TG  G+ 
Sbjct: 8   NMFVALHTYSAH-RPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIF 56

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 54.5 bits (132), Expect = 4e-10
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
           SFLVR S++SPG  S+      ++  +RI   +    Y+     F  L  +++ +     
Sbjct: 28  SFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVAD 87

Query: 59  VEGHTLGFPVTRIN 72
               TL +P  + N
Sbjct: 88  GLITTLHYPAPKRN 101

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 89  GDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPCPPPEP 129
           G  Y+    +F++L++L+ ++S+ +D L    L +P P    
Sbjct: 62  GKLYVSSESRFNTLAELVHHHSTVADGLIT-TLHYPAPKRNK 102

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 54.7 bits (132), Expect = 6e-10
 Identities = 13/76 (17%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKK-AVRYLMGGRTFECLDAVINRYRKEQIV 59
           +FLVR       ++++    N +++  +I     +  +   + F  L  ++  Y++  + 
Sbjct: 49  TFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVEFYQQNSLK 108

Query: 60  EGH-----TLGFPVTR 70
           +       TL FP   
Sbjct: 109 DCFKSLDTTLQFPFKE 124

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 46.2 bits (110), Expect = 7e-07
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 82  FRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRE----RLAHPCPPPEP 129
            ++    G + I  +  F  L++L+ +Y   S     +     L  P   PE 
Sbjct: 75  IKIMTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEK 127

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
                       VA+  Y  +   D+L+F KG+ F + N     W    +  TGE G I
Sbjct: 7   LRTRGGTGVTLFVALYDYEAI-TEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYI 64

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 51/126 (40%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FL+R S+ + G YSL     + ++   ++                      Y+  ++  
Sbjct: 30  TFLIRESETTKGAYSLSIRDWDDMKGDHVK---------------------HYKIRKLDN 68

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRER 119
           G                             +YI  R QF++L  L+ +YS  +  L   R
Sbjct: 69  GG----------------------------YYITTRAQFETLQQLVQHYSERAAGLSS-R 99

Query: 120 LAHPCP 125
           L  P  
Sbjct: 100 LVVPSH 105

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD--ET 194
            A+  Y    + D+L+F KG+ F + N     W    +  TGE G I    +  +D  + 
Sbjct: 9   EALYDYEARTE-DDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDRLDY 67

Query: 195 IDPNTVFDWFH 205
            D +      H
Sbjct: 68  KDDDDKHHHHH 78

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHN-ELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           K+++  I P+T   +   L+F +GD+  +   E  DGWL+     +  +G       + L
Sbjct: 6   KQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLL 65

Query: 192 DE 193
           +E
Sbjct: 66  EE 67

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHN-ELGDGWLWVTAHRTGEQGM 182
           P     + + R+ AI  +    ++  L+F++GD+  +   E  DGW +  + +T  +G 
Sbjct: 2   PLG---SGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGW 57

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 21/130 (16%), Positives = 35/130 (26%), Gaps = 51/130 (39%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
            F+VR S    G Y++                +V     G        VI  Y      +
Sbjct: 35  GFIVRDSSK-AGKYTV----------------SVFAKSTGDP----QGVIRHYVVCSTPQ 73

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRER 119
                                         +Y+  +  F ++ +LI+Y+   S  L   R
Sbjct: 74  SQ----------------------------YYLAEKHLFSTIPELINYHQHNSAGLIS-R 104

Query: 120 LAHPCPPPEP 129
           L +P      
Sbjct: 105 LKYPVSQQNK 114

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 50.7 bits (122), Expect = 3e-09
 Identities = 10/47 (21%), Positives = 18/47 (38%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            A   +       EL  +KGD+ ++  E   GW         ++G +
Sbjct: 4   EAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWV 50

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 51.9 bits (125), Expect = 3e-09
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 49/125 (39%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FL+R S++ PG   L       +  +RI ++   Y                        
Sbjct: 27  NFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYY----------------------- 63

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
                                     +  D +     F +L +L+S Y      L    L
Sbjct: 64  -------------------------RIETDAHTPRTIFPNLQELVSKYGKPGQGLVV-HL 97

Query: 121 AHPCP 125
           ++P  
Sbjct: 98  SNPIM 102

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV- 59
            FLVR S     +Y L    +   + F I+     Y + G  F  +  +I+     Q   
Sbjct: 37  DFLVRESQ-GKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPL 95

Query: 60  ---EGHTLGFPVTR 70
               G  L   V  
Sbjct: 96  TKKSGVVLHRAVPS 109

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRE---RLAHPCPPP 127
           F + ++   + + G  F S+  LI +  S    L ++    L    P  
Sbjct: 62  FIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPSG 110

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 55.0 bits (132), Expect = 6e-09
 Identities = 36/235 (15%), Positives = 58/235 (24%), Gaps = 74/235 (31%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
            FL+R    S G Y L    + +   F IE++                            
Sbjct: 33  LFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQL--------------------------- 65

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
                      N    I                GG+     ++L  +YS   D L    L
Sbjct: 66  -----------NGTYAI---------------AGGKAHCGPAELCEFYSRDPDGLPC-NL 98

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQ 180
             PC  P  +  +  +   L    + D    T                  W       EQ
Sbjct: 99  RKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQT------------------WKLEGEALEQ 140

Query: 181 GMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVN--FTISESDST 233
            +I +    +       +    W+H   T+ +A   L      +  F +      
Sbjct: 141 AIISQAPQVEKLIATTAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQ 195

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 10/170 (5%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
            FL+RP     G Y+L       +  + I +       +  G  F+ L  ++   + +  
Sbjct: 186 KFLLRPRK-EQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKAD 244

Query: 59  VEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRE 118
              + L       +      +A   + A         R+ D+L+                
Sbjct: 245 GLIYCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPA------- 297

Query: 119 RLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDG 168
           R+  P  P     D     +     +     +L  ++ ++     ELG G
Sbjct: 298 RITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCG 347

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
            AI  +      DEL  +  D   V  +  D W      RTG +G+
Sbjct: 10  RAIFRFVPR-HEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGV 54

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
                  D  ++     +      DE+T Q+ D+  V  +  DGWL+    R GE G 
Sbjct: 9   QGLSSKGDLPQVEITKAFFAK-QADEVTLQQADVVLVL-QQEDGWLYGERLRDGETGW 64

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
                 +  +  +A+  +T      +LTF+KG+I  V  +  DGW W+     G +G++ 
Sbjct: 2   SESHKWSTGEEYIAVGDFTAQ-QVGDLTFKKGEILLVIEKKPDGW-WIAKDAKGNEGLVP 59

Query: 185 RDLVEDLDE 193
           R  +E   E
Sbjct: 60  RTYLEPYSE 68

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 50/134 (37%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +F+VR S  +PG Y++                +V      +     +  I  Y       
Sbjct: 33  AFMVRDSR-TPGTYTV----------------SVFT----KAIISENPCIKHYH------ 65

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRER 119
                               I         +Y+  +  FDS+  LI Y+      L   R
Sbjct: 66  --------------------IKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVT-R 104

Query: 120 LAHPCPP-PEPVND 132
           L +P    P    D
Sbjct: 105 LRYPVCGSPGIHRD 118

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A* Length = 62

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
           ++   AI  +      DEL  +  D   V  +  D W      RTG +G+
Sbjct: 3   EQTHRAIFRFVPR-HEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGV 51

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGR--TFECLDAVINRYRKEQ 57
           SFL+R S +  G Y+L +   +    F ++      +++ G       LDA++  ++++ 
Sbjct: 39  SFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKP 97

Query: 58  IVE-GHTLGFPVTRIN 72
           I      L  P  + +
Sbjct: 98  IEPRRELLTQPCRQKD 113

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 82  FRVTAVC-GDFYIGGRQ--FDSLSDLISYYSSCSDLLKRERLAHPCPPPEP 129
           F V  +  G F I G +    SL  L++++       +RE L  PC   + 
Sbjct: 64  FMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELLTQPCRQKDS 114

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 8/109 (7%)

Query: 127 PEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRD 186
                 +  +VA+  Y  +   ++L+FQKGD   V  E G+ W    +  T ++G I  +
Sbjct: 2   AMGSGIRIIVVALYDYEAIHH-EDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSN 59

Query: 187 LVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST 233
            V    ++++     +WF    ++ DA   L+  G    +F I +S++T
Sbjct: 60  YVA-RVDSLE---TEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETT 104

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 1   SFLVRPSDNSPGDYSL-----FFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRY 53
           SF++R S+ + G YSL          + ++ ++I        Y+    TF  L  +++ Y
Sbjct: 95  SFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHY 154

Query: 54  RKEQIVEGHTLGFPVTR 70
           +K        L  P   
Sbjct: 155 KKGNDGLCQKLSVPCMS 171

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 51/126 (40%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           SFL+R S+++ G +SL                +VR     +        +  Y+   +  
Sbjct: 29  SFLIRESESTAGSFSL----------------SVRDFDQNQGEV-----VKHYKIRNLDN 67

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRER 119
           G                             FYI  R  F  L +L+ +Y++ SD L   R
Sbjct: 68  GG----------------------------FYISPRITFPGLHELVRHYTNASDGLCT-R 98

Query: 120 LAHPCP 125
           L+ PC 
Sbjct: 99  LSRPCQ 104

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
           P P PE ++    +  +  Y    D     F++G+   V ++ G  W    +  TG +  
Sbjct: 8   PLPNPEGLDSD-FLAVLSDYPSP-DISPPIFRRGEKLRVISDEGGWW-KAISLSTGRESY 64

Query: 183 I 183
           I
Sbjct: 65  I 65

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 1   SFLVRPS-DNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI 58
           +FLVR +     GDY+L        +  +I  +  +Y      TF  +  +IN YR E +
Sbjct: 34  TFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESL 93

Query: 59  VEG-----HTLGFPVTRIN 72
            +        L +PV++  
Sbjct: 94  AQYNPKLDVKLLYPVSKYQ 112

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 5/54 (9%)

Query: 82  FRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRE----RLAHPCPPPEPV 130
            ++    G +       F S+ +LI++Y + S          +L +P    +  
Sbjct: 61  IKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKYQQD 114

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +R VA+  +    D +EL   +GDI F+  + G GWL        + G++
Sbjct: 2   QRAVALYDFEPEND-NELRLAEGDIVFISYKHGQGWLVAENESGSKTGLV 50

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 48.5 bits (116), Expect = 3e-08
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
            +R VA+  +    D +EL   +GDI F+  + G GWL        + G++  + V  + 
Sbjct: 5   NQRAVALYDFEPEND-NELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 63

Query: 193 ETIDPNTVFDWFH 205
                +      H
Sbjct: 64  PE-LEHH--HHHH 73

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 48.6 bits (116), Expect = 4e-08
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVH----NELGDGWLWVTAHRTGEQGMIFRDL 187
           + + +  I PYT   + DEL    GD  F+         +GW++ T+  TG  G++  + 
Sbjct: 15  NHETLQVIYPYTPQ-NDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENY 73

Query: 188 VEDLDET 194
           +   DE 
Sbjct: 74  ITKADEC 80

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 51.4 bits (122), Expect = 6e-08
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 1   SFLVRPS-DNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI 58
           +FLVR +     GDY+L        +  +I  +  +Y      TF  +  +IN YR E +
Sbjct: 33  TFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESL 92

Query: 59  VEGH-----TLGFPVTRIN 72
            + +      L +PV++  
Sbjct: 93  AQYNPKLDVKLLYPVSKYQ 111

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 39.4 bits (91), Expect = 7e-04
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 5/54 (9%)

Query: 82  FRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRE----RLAHPCPPPEPV 130
            ++    G +       F S+ +LI++Y + S          +L +P    +  
Sbjct: 60  IKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKYQQD 113

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 51.4 bits (123), Expect = 7e-08
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 116 KRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH 175
             + +  P             VA+  Y       +L+F+KG+   + N     W    + 
Sbjct: 68  SSDTVTSPQRAGPLAGGVTTFVALYDYESR-TETDLSFKKGERLQIVNNTEGDWWLAHSL 126

Query: 176 RTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST 233
            TG+ G I  + V       D     +W+  + T+ ++  +L+ A      F + ES++T
Sbjct: 127 STGQTGYIPSNYVAP----SDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT 182

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 29/133 (21%), Positives = 43/133 (32%), Gaps = 51/133 (38%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FLVR S+ + G Y L                +V      +        +  Y+  ++  
Sbjct: 173 TFLVRESETTKGAYCL----------------SVSDFDNAK-----GLNVKHYKIRKLDS 211

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYI-GGRQFDSLSDLISYYSSCSDLLKRER 119
           G                             FYI    QF+SL  L++YYS  +D L   R
Sbjct: 212 GG----------------------------FYITSRTQFNSLQQLVAYYSKHADGLCH-R 242

Query: 120 LAHPCPPPEPVND 132
           L   CP  +P   
Sbjct: 243 LTTVCPTSKPQTQ 255

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 48.1 bits (115), Expect = 9e-08
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQI 58
           +FLVR S    G Y+    ++ +++   I K A    +      +  L  ++  Y+   +
Sbjct: 33  TFLVRESSK-QGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSL 91

Query: 59  VEG-----HTLGFPVTR 70
           V+       TL +PV  
Sbjct: 92  VQHNDSLNVTLAYPVYA 108

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 5/46 (10%)

Query: 89  GDFYIGGRQ-FDSLSDLISYYSSCSDLLKRE----RLAHPCPPPEP 129
           G  +      + SL +L+ +Y   S +   +     LA+P    + 
Sbjct: 66  GYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYAQQR 111

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 47.4 bits (113), Expect = 9e-08
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +     VA+  Y       +L+F KG+ F +       W    +  TGE G I
Sbjct: 4   SGVTLFVALYDYNAT-RWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYI 55

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 49.9 bits (119), Expect = 9e-08
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGR-----TFECLDAVINRYRK 55
           +FL+R S      +S+ F   ++    RIE+    +              +  ++  Y+ 
Sbjct: 57  TFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKD 116

Query: 56  EQIVEGHT--LGFPVTR 70
                     L  P+ R
Sbjct: 117 PSACMFFEPLLSTPLIR 133

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 8/78 (10%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGG--------RTFECLDAVINR 52
           +FL+R S +S    ++    +      RIE +  ++ +          + F+ +  +I+ 
Sbjct: 40  TFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDY 99

Query: 53  YRKEQIVEGHTLGFPVTR 70
           Y +    +      P   
Sbjct: 100 YVQMCKDKRTGPEAPRNG 117

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 4/60 (6%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY----LMGGRTFECLDAVINRYRKE 56
           SFLVR S +     SL F  + +    RIE    R+             +  +I     +
Sbjct: 47  SFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIGD 106

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQ 180
           ++     E  ++   +VA+  Y  +   ++L+FQKGD   V  E G+ W    +  T ++
Sbjct: 13  SNTPGIREAGSEDIIVVALYDYEAIHH-EDLSFQKGDQMVVLEESGEWW-KARSLATRKE 70

Query: 181 GMI 183
           G I
Sbjct: 71  GYI 73

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           ND    VA+  +    D + L+  KG+   V     +G  W  A     QG +
Sbjct: 3   NDPNLFVALYDFVASGD-NTLSITKGEKLRVLGYNHNGE-WCEAQTKNGQGWV 53

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWV-TAHRTGEQGM 182
           + +   A+  Y+   D DE++F+ GD       + DGW    T  RTG  GM
Sbjct: 5   NLRTYRAMYDYSAQ-DEDEVSFRDGDYIVNVQPIDDGW-MYGTVQRTGRTGM 54

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
           + + A+  Y     +DELTF +G +    ++   GW W   + T  Q     + VED+  
Sbjct: 8   RTVKALYDYKA-KRSDELTFCRGALIHNVSKEPGGW-WKGDYGTRIQQYFPSNYVEDISG 65

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETID 196
           VA+  Y    +  +L+F+KG+   + N     W    +  TG+ G I  + V       D
Sbjct: 6   VALYDYESRTE-TDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAP----SD 60

Query: 197 PNTVFDWFHPECTKNDAVDMLVKAGPVN--FTISESDST 233
                +W+  + T+ ++  +L+ A      F + ES++T
Sbjct: 61  SIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT 99

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 29/133 (21%), Positives = 43/133 (32%), Gaps = 51/133 (38%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FLVR S+ + G Y L                +V      +        +  Y+  ++  
Sbjct: 90  TFLVRESETTKGAYCL----------------SVSDFDNAK-----GLNVKHYKIRKLDS 128

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYI-GGRQFDSLSDLISYYSSCSDLLKRER 119
           G                             FYI    QF+SL  L++YYS  +D L   R
Sbjct: 129 GG----------------------------FYITSRTQFNSLQQLVAYYSKHADGLCH-R 159

Query: 120 LAHPCPPPEPVND 132
           L   CP  +P   
Sbjct: 160 LTTVCPTSKPQTQ 172

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGD-GWLWVTAHRTGEQGMI 183
            P        + +    +T+ P   EL F+KGD+  +     +  W  V  H +G++G++
Sbjct: 9   MPTRRWAPGTQCITKCEHTR-PKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLL 67

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGG--------RTFECLDAVINR 52
           +FL+R S +    ++L     +  +  RI+ +   + +            F+C+  +++ 
Sbjct: 46  TFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHH 105

Query: 53  YRKEQIVEGHT--LGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSS 110
           Y         +     P + +       +            Y GG +   +  ++S   S
Sbjct: 106 YMPPPGTPSFSLPPTEPSSEVPEQPPAQALPGSTPKRAYYIYSGGEK---IPLVLSRPLS 162

Query: 111 CS 112
            +
Sbjct: 163 SN 164

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY--LMGGRTFECLDAVINRYRKEQI 58
           +FL+R S    G Y+    ++   +   I + A  +        +  L  ++  Y+   +
Sbjct: 217 TFLIRESSQ-RGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASL 275

Query: 59  VEG-----HTLGFPVTR 70
           V+       TL  PV  
Sbjct: 276 VQHNDALTVTLAHPVRA 292

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 89  GDFYIGGR-QFDSLSDLISYYSSCSDLLKRE----RLAHPCPPPEP 129
           G  +      + SL +L+ +Y   S +   +     LAHP   P P
Sbjct: 250 GFGFAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLAHPVRAPGP 295

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 45.3 bits (108), Expect = 3e-07
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +  VAI  Y    D  +L+F +G+   +  +    W W    R G  G I
Sbjct: 8   EEFVAIADYAAT-DETQLSFLRGEKILILRQTTADW-W-WGERAGCCGYI 54

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGW---LWVTAHRTGEQG 181
              +  +   + V +  +    D +EL+F+ GD+F V  +    W   L   A     QG
Sbjct: 2   VSRDQAHLGPKYVGLWDFKSRTD-EELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQG 60

Query: 182 MI 183
            +
Sbjct: 61  YV 62

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 45.1 bits (107), Expect = 6e-07
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
             P    ++  ++A+  Y    D  EL  ++ + + + +     W W    R G +G +
Sbjct: 11  RRPLWEPEETVVIALYDYQTN-DPQELALRRNEEYCLLDSSEIHW-WRVQDRNGHEGYV 67

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 44.6 bits (106), Expect = 7e-07
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
                       +A   +       +L F KGD+  +     D   +   ++ G +G+I
Sbjct: 3   AIQASWPSGTECIAKYNFHG-TAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 45.2 bits (107), Expect = 7e-07
 Identities = 13/50 (26%), Positives = 15/50 (30%), Gaps = 2/50 (4%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMP-DTDELTFQKGDIFFVHNELGDGWLW 171
             P P   N      AI        D   L  + GDI  V     +G  W
Sbjct: 6   SGPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQ-W 54

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 127 PEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
               ++ K++VA+  Y  M + ++L  +KGD +F+  E    W W    + G++G I
Sbjct: 2   SMSTSELKKVVALYDYMPM-NANDLQLRKGDEYFILEESNLPW-WRARDKNGQEGYI 56

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 44.9 bits (106), Expect = 1e-06
 Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 121 AHPCPPPEPVNDK-KRIVAILPYTKMPDT-----DELTFQKGDIFFVHNELGDGWLWVTA 174
                  +  + K    VA   Y            EL    G   +V+ ++ +   +   
Sbjct: 4   GSSGTSKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGE 63

Query: 175 HRTGEQGMIFRDLVEDLDET 194
              G++G++  + V+ + + 
Sbjct: 64  LLDGQRGLVPSNFVDFVQDN 83

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 10/68 (14%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGG--------RTFECLDAVINR 52
           +FL+R S +    ++L     +  +  RI+ +   + +            F+ +  +++ 
Sbjct: 57  TFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLVHH 116

Query: 53  YRKEQIVE 60
           Y   Q + 
Sbjct: 117 YMPPQALP 124

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 89  GDFYIGGR-QFDSLSDLISYYSSCSDLLKRERLAHPC 124
              Y+     FDS+  LI Y+   S  +   RL HP 
Sbjct: 74  NKLYLAENYCFDSIPKLIHYHQHNSAGMIT-RLRHPV 109

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 1   SFLVRPSDNSPGDYSL------FFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINR 52
           +F+VR S    G Y++             ++ + +   A    YL     F+ +  +I+ 
Sbjct: 35  AFMVRNSS-QVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHY 93

Query: 53  YRKEQIVEGHTLGFPVT 69
           ++         L  PV+
Sbjct: 94  HQHNSAGMITRLRHPVS 110

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           PP  P +  +++VAI  YTK    DEL+FQ+G I +V  +  DGW +
Sbjct: 9   PPWAPRSYLEKVVAIYDYTKD-KEDELSFQEGAIIYVIKKNDDGW-Y 53

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           +   +VA+  Y      D+L+FQKGD   V  E G+ W    +  T ++G I  + V   
Sbjct: 2   EDIIVVALYDYVSWSP-DDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV--- 56

Query: 192 DETIDPNTVFDWFHPECTKNDAVDML 217
              +D             +  A  M 
Sbjct: 57  -ARVDSGGGTSGGGRH-RRRQAERMS 80

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 4/88 (4%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
           P   PE +   +   AI  Y K     E+    GD+  V  +   GW +       ++G 
Sbjct: 2   PLGSPEFI-ILQTYRAIADYEKT-SGSEMALSTGDVVEVVEKSESGWWFCQMK--AKRGW 57

Query: 183 IFRDLVEDLDETIDPNTVFDWFHPECTK 210
           I    +E LD   +       +  E   
Sbjct: 58  IPASFLEPLDSPDETEDPEPNYAGEPYV 85

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 115 LKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTA 174
           L+          PEP    +  VAI  YT +   DE++  +G+   V ++L DGW  +  
Sbjct: 63  LEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEG-DEVSLLEGEAVEVIHKLLDGWWVIRK 121

Query: 175 HRTGEQGMIFRDLVEDLDETIDP 197
                 G      ++   + +  
Sbjct: 122 D--DVTGYFPSMYLQKSGQDVSQ 142

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
            +   A+  YT   + DEL    GDI  V  E  DGW W T  R G++G 
Sbjct: 8   AQEYRALYDYTAQ-NPDELDLSAGDILEVILEGEDGW-W-TVERNGQRGF 54

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 147 DTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMI 183
           D DE+T   GD   +     G GW  +    TGE G++
Sbjct: 14  DDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLV 51

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 8/78 (10%)

Query: 122 HPCPPPEPVNDKKRIVAILPYT-------KMPDTDELTFQKGDIFFVHNELGDGWLWVTA 174
               P       +  VA+  Y             +EL F++G I  V+ +      +   
Sbjct: 6   SGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADG-FYRG 64

Query: 175 HRTGEQGMIFRDLVEDLD 192
                 G+I  ++V ++ 
Sbjct: 65  ETCARLGLIPCNMVSEIQ 82

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 122 HPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQG 181
                     ++  ++A+  Y    D  EL  +  + +++ +     W W    + G +G
Sbjct: 9   EDNRRSFQEPEETLVIALYDYQTN-DPQELALRCDEEYYLLDSSEIHW-WRVQDKNGHEG 66

Query: 182 MI 183
             
Sbjct: 67  YA 68

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
            ++ V +  Y K  +  EL+ Q G++  V  +   GW W     + EQG +    +E  +
Sbjct: 8   LEQYVVVSNYKKQ-ENSELSLQAGEVVDVIEKNESGW-W-FVSTSEEQGWVPATYLEAQN 64

Query: 193 ET 194
             
Sbjct: 65  SG 66

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +    +  +      +EL    G+I FV  +  D W  V     G++G++
Sbjct: 8   EAHRVLFGFVPE-TKEELQVMPGNIVFVLKKGNDNWATVM--FNGQKGLV 54

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 42.4 bits (100), Expect = 4e-06
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           A      +    K+ ++A+  Y +     E+T +KGDI  + N     W W
Sbjct: 9   AAYVKKLDSGTGKELVLALYDYQEK-SPREVTMKKGDILTLLNSTNKDW-W 57

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
                   ++R      Y    + DEL  + GDI  V  E+ +GW W      G+ GM  
Sbjct: 10  TNKRGERRRRRCQVAFSYLPQ-NDDELELKVGDIIEVVGEVEEGW-WEGVLN-GKTGMFP 66

Query: 185 RDLVEDLDETIDPNTV 200
            + +++L    D   +
Sbjct: 67  SNFIKELSGESDELGI 82

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           + +VA+  +    +  +L  ++G  + +  +    W W    + G +G I
Sbjct: 3   EIVVAMYDFQAT-EAHDLRLERGQEYIILEKNDLHW-WRARDKYGSEGYI 50

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 43.7 bits (103), Expect = 5e-06
 Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 37/124 (29%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FL+R S +  G Y L   +       +  K            + ++ ++  +  E   +
Sbjct: 43  AFLIRDSHSFQGAYGLALKVATPPPSAQPWKG-----------DPVEQLVRHFLIETGPK 91

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
           G  +    +                            F SLS L+S +S     L    L
Sbjct: 92  GVKIKGCPSE-------------------------PYFGSLSALVSQHSISPISLPC-CL 125

Query: 121 AHPC 124
             P 
Sbjct: 126 RIPS 129

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 42.4 bits (100), Expect = 6e-06
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQ 180
            H          K+ ++A+  Y +     E+T +KGDI  + N     W W        Q
Sbjct: 5   HHHHHHGSDETGKELVLALYDYQEKSP-REVTMKKGDILTLLNSTNKDW-W-KVEVNDRQ 61

Query: 181 GMI 183
           G +
Sbjct: 62  GFV 64

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +++ V + PYT     DE+ F+KG    V  +  +GW W      G++G  
Sbjct: 8   EEKYVTVQPYTSQ-SKDEIGFEKGVTVEVIRKNLEGW-W-YIRYLGKEGWA 55

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 45.6 bits (108), Expect = 6e-06
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQ 57
          SFL RPS ++PGD +L    N  +   +I+     Y L GG  F  L  ++  Y +  
Sbjct: 28 SFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHH 85

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 37/168 (22%), Positives = 57/168 (33%), Gaps = 42/168 (25%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLM-----------GGRTFECLDAV 49
           SFLVR S + PGD+ L     +        K  V ++M           GG  F+ L  +
Sbjct: 134 SFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDL 193

Query: 50  INRYRKEQIVEGHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYS 109
           +  Y+K  +VE  TLG         + +               I   + +S    +S  +
Sbjct: 194 VEHYKKNPMVE--TLGTV-------LQLKQP-------LNTTRINAAEIESRVRELSKLA 237

Query: 110 SCSDLLKR------ERLAHPCPPPE--------PVNDKK-RIVAILPY 142
             +D +K+      E L                  N  K R   ILP+
Sbjct: 238 ETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPF 285

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 42.4 bits (100), Expect = 7e-06
 Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 2/51 (3%)

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           +   P     +          Y      DEL+  KG    V  +  DGW W
Sbjct: 5   SSGDPGERLYDLNMPAYVKFNYMAE-REDELSLIKGTKVIVMEKCSDGW-W 53

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
            FLVR S     +Y L    +   + F I+     Y + G  F  +  +I+     Q   
Sbjct: 34  DFLVRESQ-GKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPL 92

Query: 61  GHTLGFPVTR 70
               G  + R
Sbjct: 93  TKKSGVVLHR 102

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
           + + A+  +    D ++L F+KGDI  + ++  + W W      G++GMI    VE    
Sbjct: 4   EYVRALFDFNGN-DEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVEKYHH 61

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 41.7 bits (98), Expect = 9e-06
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 3/47 (6%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +    Y K+    E++F  G    V  +   GW +V       +G  
Sbjct: 12  MTCSAYQKV-QDSEISFPAGVEVQVLEKQESGWWYVR--FGELEGWA 55

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 41.5 bits (98), Expect = 9e-06
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMI 183
           KKR +    +      DELT + GD  ++ ++     W       +G+ G++
Sbjct: 6   KKRGIVQYDFMAESQ-DELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLV 56

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 3/61 (4%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
                  + ++  ++A   YT   D  EL  +K +  ++ ++    W W   +     G 
Sbjct: 21  SLVKNLHMTEEVIVIAKWDYTAQQD-QELDIKKNERLWLLDD-SKTW-WRVRNAANRTGY 77

Query: 183 I 183
           +
Sbjct: 78  V 78

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +  K +  +  +T   + +EL+  K ++  V  + G  W W    R+G+ G +
Sbjct: 5   SSGKYVKILYDFTAR-NANELSVLKDEVLEVLED-GRQW-WKLRSRSGQAGYV 54

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 41.4 bits (97), Expect = 1e-05
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHP 206
              E+T +KGDI  + N     W  V  +    QG +    V+ LD       V   +  
Sbjct: 4   GPREVTMKKGDILTLLNSTNKDWWKVEVN--DRQGFVPAAYVKKLDSGTGKELVLALYDY 61

Query: 207 ECTKNDA 213
           + + ++A
Sbjct: 62  QESGDNA 68

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
               ++A+  Y       +L F+KG+   +  + G+ W    +  TG++G I
Sbjct: 5   QDNLVIALHSYEP-SHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFI 54

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
           PP   V +    VA   +       EL+F+KG+   +  ++ + W       TG QG+
Sbjct: 9   PPTYQVLEYGEAVAQYTFKGD-LEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGI 65

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGW 169
           P   P  D+    A+  +    +  EL F++GD+  + N++ + W
Sbjct: 5   PEFMPPLDQPSCKALYDFEPE-NDGELGFREGDLITLTNQIDENW 48

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            V+    +VA+  YT    +DELT  +GDI  V  +  + W W  +   G++G  
Sbjct: 2   QVDTAPTVVALYDYTAN-RSDELTIHRGDIIRVFFKDNEDW-WYGSIGKGQEGYF 54

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
          SFL RPS  + GD+SL   + +Q+   RI+     Y L GG  F  L  ++  Y ++Q V
Sbjct: 26 SFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGV 85

Query: 60 EGHTLGFPVT 69
               G  + 
Sbjct: 86 LQDRDGTIIH 95

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} Length = 595

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
          SFL RPS  + GD+SL   + +Q+   RI+     Y L GG  F  L  ++  Y ++Q V
Sbjct: 26 SFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGV 85

Query: 60 EGHTLGFPVT 69
               G  + 
Sbjct: 86 LQDRDGTIIH 95

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 6/62 (9%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW---VTAHRTGEQG 181
                 N K   V+I  Y    D +   FQ+G    V     +GW W   +       +G
Sbjct: 2   SSGSSGNLKDVYVSIADYEG--DEETAGFQEGVSMEVLERNPNGW-WYCQILDGVKPFKG 58

Query: 182 MI 183
            +
Sbjct: 59  WV 60

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 3/50 (6%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            ++  +  +       ELT  +G+   V +     W  V  +  G  G I
Sbjct: 8   LKMQVLYEFEARNP-RELTVVQGEKLEVLDHSKRWW-LVK-NEAGRSGYI 54

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 127 PEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMI 183
                   +   +  +   P  +ELT  +G+I  V N  +G GWL    ++ GEQG++
Sbjct: 3   SGSSGMATKARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNK-GEQGLV 59

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMI 183
            +R +    +      DELT + GD  ++ ++     W       +G+ G++
Sbjct: 2   MERGIVQYDFMAESQ-DELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLV 52

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           D ++L F+KGDI  + ++  + W W      G++GMI
Sbjct: 14  DEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMI 49

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
                 + +  + A   + +  + DEL+  KGDI +V      GW W
Sbjct: 2   SSGSSGSHQLIVKARFNFKQT-NEDELSVCKGDIIYVTRVEEGGW-W 46

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 6/35 (17%), Positives = 13/35 (37%), Gaps = 2/35 (5%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
                Y     +++L+   G +  +  +   GW W
Sbjct: 11  QVTSAYVAS-GSEQLSLAPGQLILILKKNTSGW-W 43

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 40.5 bits (95), Expect = 5e-05
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 6/57 (10%)

Query: 149 DELTFQKGDIFFVHNELGDGWLWV--TAHRTGEQGMI---FRDLVEDLDETIDPNTV 200
           DELT   G+  F+       W ++     R G  G++   F  +++        N V
Sbjct: 20  DELTTYVGENLFICAHHNCEW-FIAKPIGRLGGPGLVPVGFVSIIDIATGYATGNDV 75

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens} Length = 83

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           ++ A+  +  + D   L  + GD+  V  +  DG  W
Sbjct: 20  KVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGR-W 55

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 41.0 bits (96), Expect = 5e-05
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 9/82 (10%)

Query: 1   SFLVRPSDNSPGD--YSLFFHINNQIQ--RFRIEKKAVRYLMG-----GRTFECLDAVIN 51
           SFL+R S        Y+L    N ++     R  +   +Y +G        F  +  ++N
Sbjct: 47  SFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVN 106

Query: 52  RYRKEQIVEGHTLGFPVTRINL 73
            ++   +V   +         L
Sbjct: 107 SHQHNPLVLIDSQNNTKDSTRL 128

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526

 Score = 42.5 bits (99), Expect = 5e-05
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETID 196
           +AI  +      DE+  + GDI  V     DG+      + G  G+     V +  ET+ 
Sbjct: 446 IAIYAHQPR-TADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVK 504

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 39.7 bits (93), Expect = 6e-05
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 121 AHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           +            +++ A+  +  + D +ELTF+ G+I  V ++    W W
Sbjct: 5   SSGSEIQLNNKVARKVRALYDFEAVED-NELTFKHGEIIIVLDDSDANW-W 53

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
                   + R+      +   DTD L  +KGDI  + ++   G  W
Sbjct: 3   SGSSGFCGRARVHTDFTPSPY-DTDSLKLKKGDIIDIISKPPMGT-W 47

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 39.3 bits (92), Expect = 8e-05
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
            P       K   A+  Y    DT  L F++ DI  +  +  +   ++     G++G   
Sbjct: 2   GPLGSPEFAKYARALKDYNVS-DTSLLPFKRNDIITITFKDQENKWFMGQLN-GKEGSFP 59

Query: 185 RDLVEDLDETIDP 197
            D VE L   + P
Sbjct: 60  VDHVEILLSDVPP 72

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMI 183
                 N       +  Y      DELT ++ ++  V  +   + W     ++ G+ G +
Sbjct: 5   SSGTLRNYPLTCKVVYSYKAS-QPDELTIEEHEVLEVIEDGDMEDW-VKARNKVGQVGYV 62

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 39.4 bits (92), Expect = 9e-05
 Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGD--GWLWVTAHRTGEQ 180
                +       +  + P++ + + +EL F+KG+   V  +  +   W W   +  G+ 
Sbjct: 7   GLSNGQGSRVLHVVQTLYPFSSVTE-EELNFEKGETMEVIEKPENDPEW-WKCKNARGQV 64

Query: 181 GMI 183
           G++
Sbjct: 65  GLV 67

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 7/64 (10%)

Query: 134 KRIVAILPYT------KMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDL 187
           +R+VA+  Y        +    ELTF  GDI  V  E+ +   +      G++G++  + 
Sbjct: 8   RRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELN-GQKGLVPSNF 66

Query: 188 VEDL 191
           +E++
Sbjct: 67  LEEV 70

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 38.4 bits (90), Expect = 9e-05
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 126 PPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           P    +     +A+  Y      DE++F   DI      + DGW W
Sbjct: 2   PLGSSDLGITAIALYDYQAA-GDDEISFDPDDIITNIEMIDDGW-W 45

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} PDB: 2kt1_A Length = 90

 Score = 39.2 bits (91), Expect = 9e-05
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 16/61 (26%)

Query: 138 AILPYTKMPDTDELTFQKGDIFFVHNEL---------------GDGWLWVTAHRTGEQGM 182
           A+ P+ +    ++L    GD+  V                     GW+     RT ++G 
Sbjct: 16  ALYPFRRE-RPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGD 74

Query: 183 I 183
            
Sbjct: 75  F 75

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           K+ ++A+  Y +     E+T +KGDI  + N     W  V  +    QG +
Sbjct: 5   KELVLALYDYQEK-SPREVTMKKGDILTLLNSTNKDWWKVEVN--DRQGFV 52

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B Length = 115

 Score = 39.7 bits (92), Expect = 9e-05
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 6/52 (11%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFV-----HNELGDGWLW 171
               P     ++ A   YT   DTDEL  + GD+  V       E  +GWL 
Sbjct: 36  RLDLPPGFMFKVQAQHDYTAT-DTDELQLKAGDVVLVIPFQNPEEQDEGWLM 86

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 10/51 (19%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           KK   +   +    ++ EL+  K D+  + ++    W W   + +G+ G +
Sbjct: 1   KKYAKSKYDFVAR-NSSELSVMKDDVLEILDD-RRQW-WKVRNASGDSGFV 48

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
                 +     VA+  Y      DE++F   DI      + DGW W
Sbjct: 9   YDEYENDLGITAVALYDYQAA-GDDEISFDPDDIITNIEMIDDGW-W 53

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 147 DTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMI 183
               ++  +G+   +  E  GDGW      + G +G +
Sbjct: 20  SEGTISMAEGEDLSLMEEDKGDGW-TRVRRKEGGEGYV 56

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 127 PEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           P      K ++    +       EL+ ++ D+  V ++    W W      G++G +
Sbjct: 2   PLGSGALKWVLCNYDFQARNS-SELSVKQRDVLEVLDDSRK-W-WKVRDPAGQEGYV 55

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 8/36 (22%), Positives = 12/36 (33%), Gaps = 1/36 (2%)

Query: 149 DELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMI 183
           DEL    G+   +       W       R G  G++
Sbjct: 18  DELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLV 53

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
              E++F+KG+   +  ++ + W       T  QG+ 
Sbjct: 20  TQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIF 56

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWV-TAHRTGEQGM 182
           + +ELTF + D       + D W W+    + G +G+
Sbjct: 13  EDNELTFVENDKIINIEFVDDDW-WLGELEKDGSKGL 48

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 2/35 (5%)

Query: 138 AILPYTKMP-DTDELTFQKGDIFFVHNELGDGWLW 171
           AI        D   L  + GDI  V     +G  W
Sbjct: 6   AIQKRVPCAYDKTALALEVGDIVKVTRMNINGQ-W 39

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 9/124 (7%)

Query: 78  PSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIV 137
           P  +     V   FY      + +   +      +  +K      P           R  
Sbjct: 122 PVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVS---PQGNSVDRMAAPRAE 178

Query: 138 AILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI---FRDLVEDLDET 194
           A+  +T      EL F+ GD+ F+ + +   WL  T    G  G+    F  +++D  E 
Sbjct: 179 ALFDFTG-NSKLELNFKAGDVIFLLSRINKDWLEGTVR--GATGIFPLSFVKILKDFPEE 235

Query: 195 IDPN 198
            DP 
Sbjct: 236 DDPT 239

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           N +  + A   + +  + DEL+F KGD+  V      GW W
Sbjct: 4   NSQLVVRAKFNFQQT-NEDELSFSKGDVIHVTRVEEGGW-W 42

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED 190
           +  +   A+  +      DEL  +KGDI  +H +  +GW W  +   G++G      VE+
Sbjct: 5   SSGRLCKALYSFQAR-QDDELNLEKGDIVIIHEKKEEGW-WFGSLN-GKKGHFPAAYVEE 61

Query: 191 LDETIDPNT 199
           L        
Sbjct: 62  LPSNAGNTA 70

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 10/58 (17%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW--------VTAHRTGEQGMI 183
           +  VA+  Y      ++L+F+ GD   V +   +GW W         T      QG I
Sbjct: 8   QYFVALFDYQARTA-EDLSFRAGDKLQVLDTSHEGW-WLARHLEKKGTGLGQQLQGYI 63

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 9/58 (15%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW-------VTAHRTGEQGMI 183
           K+ ++A+  Y +     E+T +KGDI  + N     W W       V       QG +
Sbjct: 1   KELVLALYDYQEKSP-REVTMKKGDILTLLNSTNKDW-WKVEVKITVNGKTYERQGFV 56

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
            +R      Y    + DEL  + GDI  V  E+ +GW W
Sbjct: 7   GRRCQVAFSYLPQ-NDDELELKVGDIIEVVGEVEEGW-W 43

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           ++ A+  Y      DELTF++GD   VH +   GW W
Sbjct: 5   QVKALYDYDAQ-TGDELTFKEGDTIIVHQKDPAGW-W 39

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            ++  ++A   YT   D  EL  +K +  ++ ++    W W   +     G +
Sbjct: 2   TEEVIVIAKWDYTAQQD-QELDIKKNERLWLLDD-SKTW-WRVRNAANRTGYV 51

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
             + K++   +  Y    + DEL  + GDI  ++ E+ +GW W
Sbjct: 3   LGSKKRQCKVLFEYIPQ-NEDELELKVGDIIDINEEVEEGW-W 43

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED 190
             K+ ++ +  Y +     ELT +KGDI  + N     W W      G QG +    ++ 
Sbjct: 4   TGKELVLVLYDYQEK-SPRELTVKKGDILTLLNSTNKDW-W-KIEVNGRQGFVPAAYLKK 60

Query: 191 LD 192
           LD
Sbjct: 61  LD 62

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 7/57 (12%)

Query: 133 KKRIVAILPYTKMPDT------DELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            K ++A L Y              L  + GD+  V+  + D   +      G +G++
Sbjct: 7   GKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQG-FYYGELGGHRGLV 62

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 118 ERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-R 176
            ++ H            R  A+  +T      EL F+ GD+ F+ + +   WL  T    
Sbjct: 3   HKVHHHHHHHMDRMAAPRAEALFDFTGN-SKLELNFKAGDVIFLLSRINKDWLEGTVRGA 61

Query: 177 TG 178
           TG
Sbjct: 62  TG 63

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLW 171
           + DEL+F KGD+  V      GW W
Sbjct: 17  NEDELSFSKGDVIHVTRVEEGGW-W 40

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           ++  +VA   Y    +  EL  +K +  ++ ++    W W   +   + G +
Sbjct: 6   EEVVVVAKFDYVAQQE-QELDIKKNERLWLLDD-SKSW-WRVRNSMNKTGFV 54

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           N  +R+  I       + DELTF +G++  V  E    W W
Sbjct: 8   NKVRRVKTIYDCQA-DNDDELTFIEGEVIIVTGEEDQEW-W 46

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 2/39 (5%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           K  + A+  Y      DELTF K  I     +   GW W
Sbjct: 3   KSAVKALFDYKAQ-REDELTFTKSAIIQNVEKQDGGW-W 39

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 37.0 bits (86), Expect = 4e-04
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
             + PY+      E+T +KGDI  + N     W  V  +    QG +
Sbjct: 4   PPLPPYS--AGGREVTMKKGDILTLLNSTNKDWWKVEVN--DRQGFV 46

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
              E+T +KGDI  + N     W  V  +    QG 
Sbjct: 2   GPREVTMKKGDILTLLNSTNKDWWKVEVN--DRQGF 35

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGW 169
           ++   +  Y    + DEL  + GDI  ++ E+ +GW
Sbjct: 2   RQCKVLFEYIPQ-NEDELELKVGDIIDINEEVEEGW 36

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           P+   +  +A   Y       EL+F+KG    +++   + W W      G  G++
Sbjct: 2   PLGSPEFAIAKFDYVGR-SARELSFKKGASLLLYHRASEDW-W-EGRHNGIDGLV 53

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486

 Score = 39.8 bits (91), Expect = 5e-04
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 122 HPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFV-HNELGDGWLWVTAHRTGEQ 180
           +P         + R+ A+  Y    + DEL+F+ GD      +E   GW        G+ 
Sbjct: 417 NPFDDDATSGTEVRVRALYDYEG-QEHDELSFKAGDELTKMEDEDEQGW-CKGRLDNGQV 474

Query: 181 GM 182
           G+
Sbjct: 475 GL 476

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 135 RIVAILPYTKMP-DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +  A+ PY     D  E++F++ +I  V +++   W W      GE G+I
Sbjct: 7   KAKALYPYDADDDDAYEISFEQNEILQV-SDIEGRW-WKARRANGETGII 54

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 119 RLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
              H        ++ +++ AI  +    + +ELTF+ G+I  V ++    W W
Sbjct: 3   HHHHHHSHMNHQHEARKVRAIYDFEAA-EDNELTFKAGEIITVLDDSDPNW-W 53

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} Length = 184

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
            P    + ++  VAI  +       +L+ Q GD+  +    GD +          QG+  
Sbjct: 9   APWRKADKERHGVAIYNFQG-SGAPQLSLQIGDVVRIQETCGDWYRGYLIKHKMLQGIFP 67

Query: 185 RDLVEDLDETIDPNTVFD 202
           +  +   + T++     +
Sbjct: 68  KSFIHIKEVTVEKRRNTE 85

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
                 +   +++A+  Y    + DEL+F KG +  V N+    W W      G  G+  
Sbjct: 26  RATPAFHPVCQVIAMYDYAAN-NEDELSFSKGQLINVMNKDDPDW-W-QGEINGVTGLFP 82

Query: 185 RDLVEDLDETIDPNT 199
            + V+   ++  P++
Sbjct: 83  SNYVKMTTDSSGPSS 97

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 36.6 bits (85), Expect = 6e-04
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 3/48 (6%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGM 182
              A+  +  M    EL F+ GD+  V +     W W       E+G 
Sbjct: 12  SAEAVWDHVTM-ANRELAFKAGDVIKVLDASNKDWWWGQID--DEEGW 56

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 7/47 (14%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLW 171
           P   P     +  A+  Y    DTDEL+F   DI  +  E   GW W
Sbjct: 2   PLGSP-----QCKALYAYDAQ-DTDELSFNANDIIDIIKEDPSGW-W 41

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
            +    +A   Y       EL+F+KG    ++    D W W      G  G+I
Sbjct: 7   GEPIEAIAKFDYVGR-TARELSFKKGASLLLYQRASDDW-W-EGRHNGIDGLI 56

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 149 DELTFQKGDIFFVHNELGDGW 169
            EL  QKGDI +++ ++   W
Sbjct: 22  KELPLQKGDIVYIYKQIDQNW 42

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 36.2 bits (84), Expect = 8e-04
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
              EL+F++GD+  +H      W     +  G +G+I
Sbjct: 23  TAQELSFRRGDVLRLHERASSDWWRGEHN--GMRGLI 57

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 37.5 bits (87), Expect = 8e-04
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 7/62 (11%)

Query: 1  SFLVRPSDNSPGDYSL---FFHINNQIQRFRIEK---KAVRYLMGGRTFECLDAVINRYR 54
          + ++RP  +   +YS+         +I+ +++          L    T   L +VI+ + 
Sbjct: 39 NMILRPGSD-SRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDYFV 97

Query: 55 KE 56
          KE
Sbjct: 98 KE 99

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 37.4 bits (86), Expect = 9e-04
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
                 + ++  VAI  +       +L+ Q GD+  +    GD +          QG IF
Sbjct: 51  SSGSSGDKERHGVAIYNFQGSGA-PQLSLQIGDVVRIQETCGDWYRGYLIKHKMLQG-IF 108

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGM 182
            R+ A+  Y    + DEL+F+ GD      E    GW       +G+ G+
Sbjct: 4   VRVRALYDYDGQ-EQDELSFKAGDELTKLGEEDEQGW-CRGRLDSGQLGL 51

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213

 Score = 38.5 bits (88), Expect = 9e-04
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 6/54 (11%)

Query: 123 PCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFV-----HNELGDGWLW 171
                 P     ++ A   YT   DTDEL  + GD+  V       E  +GWL 
Sbjct: 132 AGRLDLPPGFMFKVQAQHDYTA-TDTDELQLKAGDVVLVIPFQNPEEQDEGWLM 184

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	235
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.95
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.95
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.95
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.89
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.93
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.93
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.91
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.88
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.87
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.85
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.85
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.84
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.84
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.83
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.82
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.82
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.81
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.8
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.79
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.79
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.78
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.76
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.75
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.74
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.74
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.73
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.72
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.72
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.71
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.71
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.7
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.7
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.7
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.7
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.69
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.69
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.69
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.69
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.69
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.69
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.69
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.69
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.68
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.68
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.68
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.68
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.68
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.68
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.67
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.67
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.67
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.67
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.67
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.66
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.66
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.65
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.65
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.65
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.64
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.64
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.64
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.63
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.63
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.63
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.62
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.62
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.62
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.62
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.61
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.6
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.59
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.58
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.58
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.57
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.57
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.56
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.56
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.56
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.56
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.56
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.56
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.56
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.56
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.56
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.56
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.55
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.55
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.55
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.55
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.55
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.55
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.54
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.54
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.54
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.54
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.54
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.54
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.54
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.54
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.53
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.53
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.53
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.53
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.53
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.53
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.53
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.53
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.53
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.53
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.52
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.52
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.52
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.52
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.52
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.52
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.52
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.52
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.52
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.52
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.52
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.52
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.51
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.51
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.51
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.51
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.51
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.51
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.51
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.51
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.51
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.51
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.51
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.51
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.51
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.5
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.5
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.5
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.5
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.5
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.5
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.5
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.5
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.5
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.5
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.5
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.5
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.5
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.5
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.5
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.5
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.49
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.49
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.49
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.49
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.49
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.49
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.49
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.49
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.49
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.49
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.49
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.49
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.49
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.48
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.48
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.48
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.48
3u23_A	65	CD2-associated protein; structural genomics, struc	99.48
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.48
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.48
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.48
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.48
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.48
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.48
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.48
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.48
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.48
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.47
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.47
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.47
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.47
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.47
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.47
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.47
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.47
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.47
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.47
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.47
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.47
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.47
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.46
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.46
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.46
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.46
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.46
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.46
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.45
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.45
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.45
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.45
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.45
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.45
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.45
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.45
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.45
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.45
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.45
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.45
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.44
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.44
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.44
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.44
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.44
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.44
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.44
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.44
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.44
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.44
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.43
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.43
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.43
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.43
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.43
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.43
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.43
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.42
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.42
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.42
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.41
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.41
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.4
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.4
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.39
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.39
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.38
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.37
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.36
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.35
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.35
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.35
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.35
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.35
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.34
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.34
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.34
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.33
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.33
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	99.33
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.31
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.29
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.28
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.28
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.28
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.28
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.25
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	99.23
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.22
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.2
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.2
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.19
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	99.18
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	99.16
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.15
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.11
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.11
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.1
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.1
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.08
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	99.08
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.08
1u3o_A	82	Huntingtin-associated protein-interacting protein;	99.08
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	99.08
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.07
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.06
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.06
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.06
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.04
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.04
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.03
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.03
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.02
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.02
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.02
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.02
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	99.02
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.0
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	98.99
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	98.99
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	98.99
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	98.99
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	98.98
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	98.98
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	98.98
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	98.98
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	98.97
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	98.97
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	98.96
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	98.96
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	98.95
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	98.94
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	98.94
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	98.94
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	98.94
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	98.93
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	98.93
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	98.93
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	98.93
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	98.91
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	98.91
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.89
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	98.89
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	98.88
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	98.38
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	98.86
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	98.85
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	98.84
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	98.84
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	98.84
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	98.81
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	98.79
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	98.79
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	98.78
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	98.74
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	98.73
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	98.63
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	98.59
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	98.58
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.36
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	98.31
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	98.27
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	98.24
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	98.2
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	98.19
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	98.18
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	98.15
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	98.08
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	97.89
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	97.78
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	97.74
1uur_A	473	Stata protein, STAT protein; transcription activat	97.25
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	97.07
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	96.78
1yvl_A	683	Signal transducer and activator of transcription 1	96.6
1bf5_A	575	Signal transducer and activator of transcription 1	96.55
1y1u_A	585	Signal transducer and activator of transcription;	96.17
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	95.87
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	95.47
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	94.32
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	93.12
2kt8_A	76	Probable surface protein; SH3 family, structural g	92.79
1uur_A	473	Stata protein, STAT protein; transcription activat	90.82
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	90.0
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	89.62
1wfw_A	74	Kalirin-9A; SH3 domain, neuron-specific GDP/GTP ex	89.49
2kq8_A	70	Cell WALL hydrolase; GFT protein structure, NESG,	89.32
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	87.93
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	87.73
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	86.62
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	83.18
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	80.91

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.95  E-value=2.4e-27  Score=180.58  Aligned_cols=126  Identities=21%  Similarity=0.464  Sum_probs=107.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCE---EeEEEEEe---e-CC----eEEcCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQ---IQRFRIEK---K-AV----RYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~---v~h~~I~~---~-~~----~~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||+| +.+|.|+|||+.++.   |+||+|.+   . ++    .|..+...|+|+.+||+||+.+++ ..+.|..|++
T Consensus        37 ~FLVR~S-~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~~~~~~~~~~F~sl~eLv~~y~~~~~-~~~~L~~P~~  114 (174)
T 3qwx_X           37 TFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVL-TEASLLAAYK  114 (174)
T ss_dssp             EEEEEEC-SSTTCEEEEEECCSSSSCEEEEEEEECCCCTTSSSCCCEEETTEEESSHHHHHHHTTSSCS-SSCCCCEECC
T ss_pred             eEEEEec-CCCCCEEEEEEECCCCCceEEEEEEeccCCCCCcccceEEECCeecCcHHHHhhhhhcCcc-cccccccccc
Confidence            5999999 889999999999998   99999987   3 22    476678999999999999999874 4455555553


Q ss_pred             cCCCceeecceEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeeccCCCCCCC
Q psy13524         70 RINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTD  149 (235)
Q Consensus        70 ~~~~~~~l~~~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~~~  149 (235)
                      +                                                        +    ....++|+|+|.+ ..++
T Consensus       115 ~--------------------------------------------------------p----~~~~~~alydy~~-~~~~  133 (174)
T 3qwx_X          115 K--------------------------------------------------------P----IIEVVVGTFKFTG-ERET  133 (174)
T ss_dssp             C--------------------------------------------------------C----CSEEEEESSCBCC-SSTT
T ss_pred             c--------------------------------------------------------c----cccEEEEecCccc-CCCC
Confidence            2                                                        1    2357899999999 8999


Q ss_pred             CcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        150 ELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       150 eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      +|+|++||+|.|+++.+++| |.++..+|+.|+||+|||+.
T Consensus       134 eLsf~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          134 DLPFEQGERLEILSKTNQDW-WEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             BCCBCTTCEEEEEECCSSSE-EEEECTTCCEEEEEGGGEEE
T ss_pred             ccccccCCEEEEEEccCCCe-EEEEECCCCEEEEChHHEEe
Confidence            99999999999999999999 99996699999999999974

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.95  E-value=8.9e-29  Score=196.38  Aligned_cols=141  Identities=29%  Similarity=0.520  Sum_probs=116.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC------------------eEEcCCcccCCHHHHHHHhhhCCcccce
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV------------------RYLMGGRTFECLDAVINRYRKEQIVEGH   62 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~------------------~~~~~~~~F~sl~eLi~~y~~~~~~~~~   62 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++                  .|..+...|+||.+||+||+.+++. .+
T Consensus        36 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~~l~-~~  114 (230)
T 2dvj_A           36 VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLD-TT  114 (230)
T ss_dssp             CBEEECCSSCTTSCEEECCCSSSCCCEECBCCCSCCSSSSSSSSTTTSCCCCCEESSSCEESSHHHHHTTSTTTCSS-SS
T ss_pred             eEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCCcccccccccccccccceEEEeCCceeCCHHHHHHHHhhCccc-cc
Confidence            6999999999999999999999999999987652                  3777889999999999999999876 67


Q ss_pred             eeCCccccCCCceeecceEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeecc
Q psy13524         63 TLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPY  142 (235)
Q Consensus        63 ~L~~p~~~~~~~~~l~~~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~  142 (235)
                      .|++||++..               .+                          . .   .+.    .......++|+|+|
T Consensus       115 ~L~~Pv~~~~---------------~~--------------------------s-~---~~L----~~~~~~~~~al~dy  145 (230)
T 2dvj_A          115 TLIEPVSRSR---------------QG--------------------------S-G---VIL----RQEEAEYVRALFDF  145 (230)
T ss_dssp             CCCCBCCSCC---------------CC--------------------------C-C---CCC----SCCCCCCCBCCSCC
T ss_pred             cccccccccc---------------cc--------------------------c-c---ccc----CcccceeEEEeeee
Confidence            8999998610               00                          0 0   000    01133568999999


Q ss_pred             CCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        143 TKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       143 ~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      .+ .+++||+|++||+|.|+++.+++| |.++..+|+.|+||++||+.+..
T Consensus       146 ~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~~  194 (230)
T 2dvj_A          146 NG-NDEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVEKYRP  194 (230)
T ss_dssp             CC-SSSSSCCCCSSCBCCCCBCSCSSE-EEEECTTSCEEEEEGGGSCCCCS
T ss_pred             cC-CCCCCccCcCCCEEEEEEccCCCc-EEEEeCCCCEEEEehHHeEEcCC
Confidence            99 899999999999999999999999 99985599999999999998764

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.95  E-value=9.5e-28  Score=198.00  Aligned_cols=141  Identities=28%  Similarity=0.496  Sum_probs=116.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEee-----------------CCe-EEcCCcccCCHHHHHHHhhhCCcccce
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKK-----------------AVR-YLMGGRTFECLDAVINRYRKEQIVEGH   62 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~-----------------~~~-~~~~~~~F~sl~eLi~~y~~~~~~~~~   62 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.                 .++ |..+...|+||.+||+||+.+++. .+
T Consensus        34 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~l~-~~  112 (304)
T 2eyz_A           34 VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLD-TT  112 (304)
T ss_dssp             CEECCSCCSSSSCCEEEECSSSSCEEEECCCCSSCCSSCCCCCCCSSSSSCCCCCBTTBCCSCHHHHHTTTTTSCCS-SS
T ss_pred             EEEEEeCCCCCCCEEEEEEECCEEEEEEEeeccccccccccccccccccCCCeEEeCCcEECCHHHHHHHhhhCccc-cc
Confidence            69999999999999999999999999999872                 233 767888999999999999999876 78


Q ss_pred             eeCCccccCCCceeecceEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeecc
Q psy13524         63 TLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPY  142 (235)
Q Consensus        63 ~L~~p~~~~~~~~~l~~~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~  142 (235)
                      .|++||++..                                     . .  ..      +.   .+......++|+|+|
T Consensus       113 ~L~~P~~~~~-------------------------------------~-~--~g------~~---~~~~~~~~~~alydy  143 (304)
T 2eyz_A          113 TLIEPVSRSR-------------------------------------Q-G--SG------VI---LRQEEAEYVRALFDF  143 (304)
T ss_dssp             SSCCBCCSCS-------------------------------------C-C--SC------CC---CCCCCCCEEEECSCC
T ss_pred             eecccccccc-------------------------------------c-c--cc------cc---CCcccceeEEEEeee
Confidence            8999998600                                     0 0  00      00   011234679999999


Q ss_pred             CCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        143 TKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       143 ~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      .+ ..+++|+|++||+|.|+++.+.+| |.++..+|+.|+||++||+.+..
T Consensus       144 ~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~~  192 (304)
T 2eyz_A          144 NG-NDEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVEKYRP  192 (304)
T ss_dssp             CC-SCSSSCCCCTTCEEEEEECCSSSE-EEEECTTSCEEEEESTTEEECCC
T ss_pred             cC-CCCCcCcccCCCEEEEEEecCCCc-EEEEeCCCceeccchhccccccC
Confidence            99 889999999999999999999999 99996689999999999998753

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.89  E-value=1.5e-28  Score=202.75  Aligned_cols=147  Identities=27%  Similarity=0.528  Sum_probs=118.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcccceeeCCccccCCCceeecc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPS   79 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~~~~~~l~~   79 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ |..++..|+||.+||+||+++++ ..+.|+.||++..       
T Consensus        35 ~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~Lv~~y~~~~~-~~~~L~~P~~r~~-------  106 (303)
T 2lqn_A           35 MFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYL-DTTTLIEPAPRYP-------  106 (303)
Confidence            69999999999999999999999999999885555 77777999999999999999987 5789999998710       


Q ss_pred             eEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCC-CCCCCCCccEEEEeeccCCCCCCCCcccCCCCE
Q psy13524         80 AIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCP-PPEPVNDKKRIVAILPYTKMPDTDELTFQKGDI  158 (235)
Q Consensus        80 ~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~a~~~~~~~~~~~eL~~~~gd~  158 (235)
                                          +.        .    ..    ..|.+ ++.+......++|+|+|.+ ..+++|+|++||+
T Consensus       107 --------------------~~--------~----~~----~~~~p~~~~~~~~~~~~~alydy~~-~~~~eLsf~~Gd~  149 (303)
T 2lqn_A          107 --------------------SP--------P----MG----SVSAPNLPTAEDNLEYVRTLYDFPG-NDAEDLPFKKGEI  149 (303)
Confidence                                00        0    00    00100 0111124467899999999 8999999999999


Q ss_pred             EEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        159 FFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       159 i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      |.|+.+.+.+| |.++..+|+.|+||++||+.+..
T Consensus       150 i~v~~~~~~~W-w~~~~~~g~~G~~P~~yv~~~~~  183 (303)
T 2lqn_A          150 LVIIEKPEEQW-WSARNKDGRVGMIPVPYVEKLVR  183 (303)
Confidence            99999999999 99986589999999999998754

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.93  E-value=1.5e-24  Score=170.85  Aligned_cols=133  Identities=24%  Similarity=0.509  Sum_probs=108.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcccceeeCCccccCCCceeecc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRINLGIFIPS   79 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~~~~~~l~~   79 (235)
                      +||||+|++.+|.|+||++.++.|+||+|.+..++ |......|+|+.+||+||+.+++.....                
T Consensus        82 ~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~g~~~~~~~~f~sl~eLv~~~~~~~~~~~~~----------------  145 (217)
T 1gri_A           82 AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQ----------------  145 (217)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSSCEESSSCEESSHHHHHHHHHHSCSSSSTT----------------
T ss_pred             eEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeeeEcCCHHHHHHhhhccccccccc----------------
Confidence            69999999999999999999999999999987665 7666889999999999999876422110                


Q ss_pred             eEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeeccCCCCCCCCcccCCCCEE
Q psy13524         80 AIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIF  159 (235)
Q Consensus        80 ~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~~~eL~~~~gd~i  159 (235)
                                                            ..+..+.++   ......++|+|+|.+ .++++|+|.+||+|
T Consensus       146 --------------------------------------~~l~~~~~~---~~~~~~~~al~~y~~-~~~~eL~~~~Gd~i  183 (217)
T 1gri_A          146 --------------------------------------IFLRDIEQV---PQQPTYVQALFDFDP-QEDGELGFRRGDFI  183 (217)
T ss_dssp             --------------------------------------CCCCBCCCC---CCCCCEEEESSCCCC-SSTTBCCCCTTCEE
T ss_pred             --------------------------------------eeecccccC---CCCceEEEecCCccC-CCCCcCCCCCCCEE
Confidence                                                  000000011   124468999999999 89999999999999


Q ss_pred             EEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        160 FVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       160 ~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      .|+.+.+++| |.++. +|+.|+||++||+.++.
T Consensus       184 ~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~~~  215 (217)
T 1gri_A          184 HVMDNSDPNW-WKGAC-HGQTGMFPRNYVTPVNR  215 (217)
T ss_dssp             EEEECCSSSE-EEEEC-SSCEEEEEGGGEEEECC
T ss_pred             EEEEeCCCCe-EEEEE-CCeEEEEeHHHeEECCC
Confidence            9999999999 99998 89999999999998753

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.93  E-value=5.5e-25  Score=181.94  Aligned_cols=125  Identities=21%  Similarity=0.484  Sum_probs=106.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCE---EeEEEEEe-eC-------CeEEcCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQ---IQRFRIEK-KA-------VRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~---v~h~~I~~-~~-------~~~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||+| +.+|.|+|||+.+++   |+||+|.+ ..       +.|..+...|+|+.+||+||+.+++ ..+.|..|++
T Consensus        66 ~FLVR~S-~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~g~~~~~~~~F~Sl~eLv~~y~~~~~-~~~~L~~P~~  143 (308)
T 3qwy_A           66 TFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVL-TEASLLAAYK  143 (308)
T ss_dssp             EEEEEEC-SSTTCEEEEEECCSSSSCEEEEEEEECCCCTTTTCCCCEEETTEEESSHHHHHHHHHHSCS-SSCCCCEECC
T ss_pred             eEEEEcc-CCCCCEEEEEEeCCCCCceEEEEEeeccCCCcCcccceEEEeCeeeCCHHHHHHHHhhccc-ccchhccccc
Confidence            5999999 889999999999998   99999987 43       3476677999999999999999875 3444444443


Q ss_pred             cCCCceeecceEEEEEeecCeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCCCCCCCCccEEEEeeccCCCCCCC
Q psy13524         70 RINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAILPYTKMPDTD  149 (235)
Q Consensus        70 ~~~~~~~l~~~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~a~~~~~~~~~~~  149 (235)
                      +                                                        +    ....++|+|+|.+ ..++
T Consensus       144 ~--------------------------------------------------------p----~~~~~~al~dy~~-~~~~  162 (308)
T 3qwy_A          144 K--------------------------------------------------------P----IIEVVVGTFKFTG-ERET  162 (308)
T ss_dssp             C--------------------------------------------------------C----CCEEEEESSCBCC-SSTT
T ss_pred             c--------------------------------------------------------c----cceeEEEeceEcC-CCCC
Confidence            2                                                        1    2357899999999 8999


Q ss_pred             CcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEE
Q psy13524        150 ELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       150 eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      +|+|++||+|.|+++.+.+| |.++..+|+.|+||++||+
T Consensus       163 eLsf~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~  201 (308)
T 3qwy_A          163 DLPFEQGERLEILSKTNQDW-WEARNALGTTGLVPANYVQ  201 (308)
T ss_dssp             BCCBCTTCEEEEEECCSSSE-EEEECTTSCEEEEEGGGEE
T ss_pred             cCcCCCCCEEEEEEcCCCCe-EEEEeCCCCeeEecccccc
Confidence            99999999999999999999 9999668999999999999

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.91  E-value=5.2e-24  Score=162.24  Aligned_cols=95  Identities=26%  Similarity=0.526  Sum_probs=83.3

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccCCCCCCCcCccccCCCCh
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTK  210 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r  210 (235)
                      ....++|+|||.+ .+++||+|++||+|.|++. +++| |.++. .+|+.|+||++||++...    ++..+||||.|+|
T Consensus        11 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~~~~~~~g~~G~vP~~yv~~~~~----l~~~~w~~g~isr   83 (175)
T 4d8k_A           11 QDNLVIALHSYEP-SHDGDLGFEKGEQLRILEQ-SGEW-WKAQSLTTGQEGFIPFNFVAKANS----LEPEPWFFKNLSR   83 (175)
T ss_dssp             --CEEEESSCBCC-CSSSBCCBCTTCEEEEEEC-CSSE-EEEEETTTCCEEEEEGGGEEETTC----STTCTTBCSSCCH
T ss_pred             CCcEEEEccCcCC-cCCcccccccCCEEEEEcc-CCCE-EEEEECCCCceeeecccccccccc----ccccceecCcccH
Confidence            3468999999999 8899999999999999998 7899 98887 489999999999997642    5568999999999


Q ss_pred             HHHHHhhccCC--CeeEEeeccCCC
Q psy13524        211 NDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       211 ~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      .+||++|.+.+  +|+||||+|++.
T Consensus        84 ~~ae~lL~~~~~~~G~FLVR~S~~~  108 (175)
T 4d8k_A           84 KDAERQLLAPGNTHGSFLIRESEST  108 (175)
T ss_dssp             HHHHHHHHSTTCCTTCEEEEECSSS
T ss_pred             HHHHHHHhcCCCCCCEEEEEECCCC
Confidence            99999998754  999999999764

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.88  E-value=5.4e-25  Score=177.08  Aligned_cols=70  Identities=24%  Similarity=0.348  Sum_probs=64.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC-eE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~-~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++ .| +.+...|+||.|||+||+.+++++.+.|..||++
T Consensus        31 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~~p~~~  102 (254)
T 2oq1_A           31 LFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNR  102 (254)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             EEEEEeCCCCCCCEEEEEEECCeEEEEEEEEeCCCCEEeCCCCccCCHHHHHHHHHhCCCCcccccccccCC
Confidence            6999999999999999999999999999998544 45 6678899999999999999999999999999986

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.87  E-value=2.4e-24  Score=173.29  Aligned_cols=70  Identities=24%  Similarity=0.327  Sum_probs=64.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ | +.++..|+||.|||+||+.+++++.+.|..||++
T Consensus        30 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv~~y~~~~~~l~~~L~~p~~~  101 (254)
T 1a81_A           30 LYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNR  101 (254)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTCCTTSSSCCCEECCC
T ss_pred             EEEEEecCCCCCCEEEEEEECCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHHHHHHhCCCCceECCccccCC
Confidence            59999999999999999999999999999985444 5 6678999999999999999999999999999976

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.85  E-value=1.3e-23  Score=189.39  Aligned_cols=70  Identities=24%  Similarity=0.327  Sum_probs=64.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ | +.+...|+|+.|||+||+++++++.++|.+||.+
T Consensus        38 ~FLvR~S~~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~~y~~~~~~l~~~L~~p~~~  109 (635)
T 4fl3_A           38 LYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNR  109 (635)
T ss_dssp             EEEEEECTTSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHHHHHTTCCTTSSSCCCEECCC
T ss_pred             eEEEeecccCCCCEEEEEEeCCEEEeEEEEEcCCCCEEeCCCCccCCHHHHHHHHhhCCCCCeeccCCcCCC
Confidence            59999999999999999999999999999987554 5 6688899999999999999999999999999986

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.85  E-value=5.7e-21  Score=165.81  Aligned_cols=100  Identities=20%  Similarity=0.393  Sum_probs=86.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeec-cCCCeeEEEecCCCceeEEeCCcEEeccCC--CCCCCcCccccCCC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMIFRDLVEDLDET--IDPNTVFDWFHPEC  208 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~~~~~~G~~P~~~v~~~~~~--~~p~~~~~w~~~~~  208 (235)
                      ....++|+|||.+ ..++||+|++||+|.|++. .+++| |.++..+|+.|+||+|||++...-  .+.++..+||||.|
T Consensus        10 ~~~~~~aly~~~~-~~~~el~~~~gd~i~v~~~~~~~~w-w~~~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~wyhg~i   87 (450)
T 1k9a_A           10 SGTECIAKYNFHG-TAEQDLPFCKGDVLTIVAVTKDPNW-YKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKI   87 (450)
T ss_dssp             TTCEEEESSCBCC-SSSSBCCBCTTCEEEEEEECSSTTE-EEEECTTCCEEEEEGGGEEECCCCCCCTTEESCTTBCTTC
T ss_pred             CCCEEEECCCcCc-cCCCcCCCCCCCEEEEeeccCCCCc-eEEEECCCceeeechhccccccccccccccccccccccCc
Confidence            3457999999999 8899999999999999998 57889 888875699999999999986531  12245789999999


Q ss_pred             ChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        209 TKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       209 ~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +|++||++|.+..+|+||||+|++.
T Consensus        88 ~r~~ae~~L~~~~~G~FlvR~S~~~  112 (450)
T 1k9a_A           88 TREQAERLLYPPETGLFLVRESTNY  112 (450)
T ss_dssp             CHHHHHHHTCSCCTTEEEEEECSSS
T ss_pred             CHHHhhhhhccCCCceEEEEecCCC
Confidence            9999999998877999999999774

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.85  E-value=1.5e-23  Score=175.46  Aligned_cols=71  Identities=28%  Similarity=0.466  Sum_probs=62.9

Q ss_pred             CeEEeecCCC-CCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCC-----cccceeeCCccccC
Q psy13524          1 SFLVRPSDNS-PGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQ-----IVEGHTLGFPVTRI   71 (235)
Q Consensus         1 ~FLvR~s~~~-~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~-----~~~~~~L~~p~~~~   71 (235)
                      +||||+|++. +|.|+|||+.++.|+||+|...++.| +.+...|+||.+||+||+.++     .++.+.|..||++.
T Consensus        33 ~FLVR~S~s~~~g~y~LSvr~~~~v~H~rI~~~~g~y~l~~~~~F~SL~eLV~~Y~~~~l~~~~~gl~~~L~~Pv~r~  110 (373)
T 3hhm_B           33 TFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKY  110 (373)
T ss_dssp             EEEEEECSCC--CCEEEEEEETTEEEEEEECCSSSCBCSSSSCCBSSSHHHHHHHHHSCGGGSCTTCCCCCCEECCSC
T ss_pred             CEEEeccCCCCCCCEEEEEEECCeeEEEEEEecCCeEEeCCCCCcCCHHHHHHHHhhCCccccCCCCCcccCCCCCCc
Confidence            5999999998 99999999999999999998876666 666689999999999999998     46789999999984

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.84  E-value=1.5e-20  Score=149.99  Aligned_cols=124  Identities=33%  Similarity=0.491  Sum_probs=101.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC----e-EEcCCcccCCHHHHHHHhhhCCc---ccceeeCCccccC-
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV----R-YLMGGRTFECLDAVINRYRKEQI---VEGHTLGFPVTRI-   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~----~-~~~~~~~F~sl~eLi~~y~~~~~---~~~~~L~~p~~~~-   71 (235)
                      +||||+|++.+|+|+|||+.++.|+||+|...++    . |+.+...|+||.|||+||+++++   .+...+..|+++. 
T Consensus        38 ~FLVR~S~s~~G~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~F~sl~~LV~~y~~~~l~~~~~~~~l~~p~p~~~  117 (246)
T 4fbn_A           38 SFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQTN  117 (246)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEEECGGGCCEEEEETTEEESSHHHHHHHHHHSCEECSSCEECCCCBCCCSC
T ss_pred             EEEEEcCCCCCCCEEEEEEECCEEEEEEEEEECCCCceeEEecCCcccCCHHHHHHhHhhcccccccccccccccccccC
Confidence            6999999999999999999999999999987654    2 47888899999999999999886   3455666676654 


Q ss_pred             -------------------------CCceeecc------------------eEEEEEeecCeeEeeeEEEcchhhhhhcc
Q psy13524         72 -------------------------NLGIFIPS------------------AIFRVTAVCGDFYIGGRQFDSLSDLISYY  108 (235)
Q Consensus        72 -------------------------~~~~~l~~------------------~~~~l~~~~g~~~~g~~~f~~l~~lv~~~  108 (235)
                                               .+|.++.+                  .|++|.+..+.+.+++..|++|.+||++|
T Consensus       118 ~~~~~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~s~~~g~y~Lsv~~~~~v~H~~I~~~~~~~~~~~~~F~sL~~Lv~~y  197 (246)
T 4fbn_A          118 AHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYY  197 (246)
T ss_dssp             GGGGSTTEESSCCHHHHHHHHHTSCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEEETTEEEETTEEESCHHHHHHHH
T ss_pred             CcccCCeeecCccHHHHHHHHhhCCCCCeEEEEecCCCCCEEEEEEeCCCeEEEEEEeCCCEEEeCCCccCCHHHHHHHh
Confidence                                     24555443                  89999888777777788999999999999


Q ss_pred             ccCCchhhcccccCCCC
Q psy13524        109 SSCSDLLKRERLAHPCP  125 (235)
Q Consensus       109 ~~~~~~~~~~~~~~p~~  125 (235)
                      +..+..+. +.|..|++
T Consensus       198 ~~~p~~~~-~~L~~Pv~  213 (246)
T 4fbn_A          198 EKHPLYRK-MKLRYPIN  213 (246)
T ss_dssp             HHSCSBTT-BCCCEECS
T ss_pred             CcCCCCCC-cCCCCcCC
Confidence            98876665 77777775

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.84  E-value=5e-21  Score=169.54  Aligned_cols=95  Identities=25%  Similarity=0.513  Sum_probs=84.2

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccCCCCCCCcCccccCCCChH
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKN  211 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~  211 (235)
                      ...++|+|||.+ .+++||+|++||+|.|++..+++| |.++.. +|+.|+||++||+...    +++..+||||.|+|+
T Consensus        85 ~~~~~alyd~~~-~~~~el~~~~gd~i~v~~~~~~~w-w~~~~~~~g~~G~~P~~yv~~~~----~l~~~~wy~g~i~r~  158 (535)
T 2h8h_A           85 VTTFVALYDYES-RTETDLSFKKGERLQIVNNTEGDW-WLAHSLSTGQTGYIPSNYVAPSD----SIQAEEWYFGKITRR  158 (535)
T ss_dssp             --CEEESSCBCC-CSSSBCCBCTTCEEEEEECSSSSE-EEEEETTTCCEEEEEGGGEEETT----SGGGSTTBCCSCCHH
T ss_pred             CcEEEEccccCC-cCCCcCCcCCCCEEEEEEecCCCc-eEEEECCCCcceEecchhhcccc----cccccceeccccCHH
Confidence            456899999999 899999999999999999999999 999875 7999999999999853    255689999999999


Q ss_pred             HHHHhhccCC--CeeEEeeccCCC
Q psy13524        212 DAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       212 ~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      +||++|++.+  +|+||||+|++.
T Consensus       159 ~ae~~L~~~~~~~G~FLvR~S~~~  182 (535)
T 2h8h_A          159 ESERLLLNAENPRGTFLVRESETT  182 (535)
T ss_dssp             HHHHHHTCTTCCTTEEEEEECSSS
T ss_pred             HHHHHhccCCCCCCeEEEEecCCC
Confidence            9999999775  799999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.83  E-value=1.5e-20  Score=163.29  Aligned_cols=94  Identities=26%  Similarity=0.525  Sum_probs=84.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccCCCCCCCcCccccCCCChHH
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKND  212 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~  212 (235)
                      ..++|+|+|.+ .+++||+|++||+|.|+++.+++| |.++.. +|+.|+||++||++.+    +++..+||||.|+|++
T Consensus         3 ~~~~al~~~~~-~~~~el~~~~gd~~~v~~~~~~~w-w~~~~~~~g~~G~~P~~yv~~~~----~le~~~w~~g~~~r~~   76 (452)
T 1fmk_A            3 TTFVALYDYES-RTETDLSFKKGERLQIVNNTEGDW-WLAHSLSTGQTGYIPSNYVAPSD----SIQAEEWYFGKITRRE   76 (452)
T ss_dssp             EEEEESSCBCC-CSSSBCCBCTTCEEEESCCCSSSE-EEEEETTTCCEEEEEGGGEEETT----SGGGSTTEEETCCHHH
T ss_pred             eEEEECCccCC-CCCCCCCccCCCEEEEeccCCCCc-eEEEEcCCCcccccCcccccccc----cccccccccCCccHHH
Confidence            46899999999 899999999999999999989999 888875 7999999999999853    2556899999999999


Q ss_pred             HHHhhccCC--CeeEEeeccCCC
Q psy13524        213 AVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       213 ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      ||++|++.+  +|+||||+|++.
T Consensus        77 ae~~L~~~~~~~G~FLvR~s~~~   99 (452)
T 1fmk_A           77 SERLLLNAENPRGTFLVRESETT   99 (452)
T ss_dssp             HHHHHTCTTSCTTEEEEEECSSS
T ss_pred             HHHHhccCCCCCceEEEEeCCCC
Confidence            999999765  799999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.82  E-value=2.6e-20  Score=163.47  Aligned_cols=94  Identities=19%  Similarity=0.345  Sum_probs=83.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEeccCCCCCCCcCccccCCCChH
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKN  211 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~  211 (235)
                      ...++|+|||.+ ..++||+|++||+|.|++.. +.+| |.++. ++..|+||+|||+++.    +++..+||||.|+|+
T Consensus        43 ~~~~~alyd~~~-~~~~els~~~gd~~~v~~~~~~~~w-~~~~~-~~~~G~~P~~yv~~~~----~le~~~wyhg~i~r~  115 (495)
T 1opk_A           43 PNLFVALYDFVA-SGDNTLSITKGEKLRVLGYNHNGEW-CEAQT-KNGQGWVPSNYITPVN----SLEKHSWYHGPVSRN  115 (495)
T ss_dssp             -CEEEESSCBCC-CSTTBCCBCTTCEEEEEEECTTSSE-EEEEC-SSCEEEEEGGGEEESS----SGGGSTTEEEECCHH
T ss_pred             CcEEEEeCCcCC-CCCCCCCccCCCEEEEeecCCCCCc-eeeee-cCCcceeccccccccc----cccchhhhccCCCHH
Confidence            457999999999 88999999999999999987 6777 99998 7888999999999863    356689999999999


Q ss_pred             HHHHhhccCCCeeEEeeccCCC
Q psy13524        212 DAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       212 ~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +||++|.+..+|+||||+|++.
T Consensus       116 ~ae~ll~~~~~G~fLvR~s~~~  137 (495)
T 1opk_A          116 AAEYLLSSGINGSFLVRESESS  137 (495)
T ss_dssp             HHHHHGGGCCTTEEEEEECSSS
T ss_pred             HHHHHhhCCCCceEEEEeCCCC
Confidence            9999998867999999999865

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.82  E-value=4.3e-20  Score=160.43  Aligned_cols=95  Identities=29%  Similarity=0.535  Sum_probs=83.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccCCCCCCCcCccccCCCCh
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTK  210 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r  210 (235)
                      ....++|+|||.+ ..++||+|++||+|.|++. +++| |.++. .+|+.|+||+|||++..    +++..+||||.|+|
T Consensus         7 ~~~~~~al~~~~~-~~~~el~~~~gd~~~v~~~-~~~W-~~~~~~~~g~~G~~P~~yv~~~~----~le~~~W~~g~i~r   79 (454)
T 1qcf_A            7 IRIIVVALYDYEA-IHHEDLSFQKGDQMVVLEE-SGEW-WKARSLATRKEGYIPSNYVARVD----SLETEEWFFKGISR   79 (454)
T ss_dssp             CCCEEEESSCBCC-CSTTBCCBCTTCEEEEEEC-CTTE-EEEEETTTCCEEEEEGGGEEETT----CGGGSTTEETTCCH
T ss_pred             CCeEEEECcccCC-cCCCcCcccCCCEEEEEec-CCCC-eEEEECCCCceEEecchhccccc----ccccccccccccch
Confidence            3467999999999 8999999999999999998 5889 88884 48999999999999863    35668999999999


Q ss_pred             HHHHHhhccCC--CeeEEeeccCCC
Q psy13524        211 NDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       211 ~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      ++||++|...+  +|+||||+|++.
T Consensus        80 ~~ae~~L~~~~~~~G~FLvR~s~~~  104 (454)
T 1qcf_A           80 KDAERQLLAPGNMLGSFMIRDSETT  104 (454)
T ss_dssp             HHHHHHHHSTTCCTTCEEEEECSSS
T ss_pred             hhhhhhhhcCCCCCceEEEEECcCC
Confidence            99999997643  899999999764

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.81  E-value=7.3e-20  Score=144.00  Aligned_cols=88  Identities=31%  Similarity=0.539  Sum_probs=73.9

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEeccCCCCCCCcCccccCCCChHHH
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDA  213 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~a  213 (235)
                      .++|+|+|.+ ..++||+|++||+|.|+... +.+| |.++. +|+.|+||++||+...        .+||||.|+|++|
T Consensus         2 ~~~al~~~~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-~~~~~-~g~~G~~P~~yv~~~~--------~~w~~g~isr~~a   70 (217)
T 1gri_A            2 EAIAKYDFKA-TADDELSFKRGDILKVLNEECDQNW-YKAEL-NGKDGFIPKNYIEMKP--------HPWFFGKIPRAKA   70 (217)
T ss_dssp             EEEECSCBCC-CSSSCCCBCTTCEEEC------CCE-EEEES-SSCEEEEEGGGEECCC--------CSSBCTTCCHHHH
T ss_pred             EEEEeeccCC-cCCCcCCCCCCCEEEEEeccCCCCe-Eeecc-CCccceECCccccccc--------chhhcccCCHHHH
Confidence            4799999999 89999999999999999876 6788 99987 8999999999998432        6899999999999


Q ss_pred             HHhhcc-CCCeeEEeeccCCC
Q psy13524        214 VDMLVK-AGPVNFTISESDST  233 (235)
Q Consensus       214 e~~l~~-~~~g~fliR~s~~~  233 (235)
                      |++|.. ..+|+||||+|++.
T Consensus        71 e~lL~~~~~~G~fLvR~S~~~   91 (217)
T 1gri_A           71 EEMLSKQRHDGAFLIRESESA   91 (217)
T ss_dssp             HHHHHTCSSTTCEEEEECSSS
T ss_pred             HHHHhccCCCceEEEEccCCC
Confidence            999954 44999999999764

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.80  E-value=2e-19  Score=158.93  Aligned_cols=57  Identities=37%  Similarity=0.711  Sum_probs=51.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQ   57 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~   57 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++.| +.+...|+||.|||+||+.++
T Consensus        26 ~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~~y~~~~   83 (532)
T 2b3o_A           26 SFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQ   83 (532)
T ss_dssp             EEEEEECSSSSSEEEEEEEETTEEEEEEEECSSSCEEETTSCEESCHHHHHHHHHTTC
T ss_pred             CEEEecCCCCCCceEEEEEECCEEEEEEEEecCCEEEECCCcccCCHHHHHHHHHhcc
Confidence            599999999999999999999999999998765557 667889999999999999876

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.79  E-value=4.4e-19  Score=158.52  Aligned_cols=58  Identities=36%  Similarity=0.673  Sum_probs=53.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI   58 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~   58 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|...+++| +.+...|+||.|||+||+.+++
T Consensus        26 ~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~eLv~~y~~~~~   84 (595)
T 3ps5_A           26 SFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQG   84 (595)
T ss_dssp             CEEEEECSSSTTSEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHTTSS
T ss_pred             EEEEeecCCCCCceEEEEEECCEEEEEEEEeCCCcEEEecCccccchhhhhhhhccCcc
Confidence            699999999999999999999999999998877665 7888899999999999998763

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.79  E-value=1.7e-19  Score=126.61  Aligned_cols=82  Identities=26%  Similarity=0.473  Sum_probs=73.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccCCCCCCCcCccccCCCCh
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTK  210 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r  210 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. .+++.|+||++||++++.    .+..+||+++|+|
T Consensus        26 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~~----~~~~~w~~g~isR   99 (109)
T 2yt6_A           26 GVTIFVALYDYEA-RTTEDLSFKKGERFQIINNTEGDW-WEARSIATGKSGYIPSNYVVPADS----IQAEEWYFGKMGR   99 (109)
T ss_dssp             SCCEEEESSCCCC-SSTTSCCCCTTCEEEEEECSCTTC-EEEEESSSCCEEEECTTTEEESSS----CTTTHHHHHCCCS
T ss_pred             CCEEEEECccCCC-CCCCccCCCCCCEEEEEEccCCCc-EEEEECCCCCEEEechHHcEECCc----ccccccccCCcCH
Confidence            4578999999999 889999999999999999989999 88875 589999999999998742    4557899999999


Q ss_pred             HHHHHhhcc
Q psy13524        211 NDAVDMLVK  219 (235)
Q Consensus       211 ~~ae~~l~~  219 (235)
                      ++||++|+.
T Consensus       100 ~~Ae~lL~~  108 (109)
T 2yt6_A          100 KDAESGPSS  108 (109)
T ss_dssp             CCCCCCSCC
T ss_pred             HHHHHHhhC
Confidence            999999974

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.78  E-value=1.1e-18  Score=153.92  Aligned_cols=57  Identities=33%  Similarity=0.655  Sum_probs=52.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQ   57 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~   57 (235)
                      +||||+|++.+|.|+||++.++.|+||+|...++.| +.+...|+||.|||+||+.++
T Consensus        28 ~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLv~~y~~~~   85 (525)
T 2shp_A           28 SFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHH   85 (525)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHHTCT
T ss_pred             cEEeeccCCCCCcEEEEEEECCEEEEEEEEecCCeEEECCCCeECCHHHHHHHHHhCC
Confidence            599999999999999999999999999998766666 777889999999999999876

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.76  E-value=3e-18  Score=117.85  Aligned_cols=70  Identities=24%  Similarity=0.373  Sum_probs=65.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++| +.+...|+||.|||+||+.+++++.++|..||++
T Consensus        28 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~~y~~~~~~l~~~L~~P~pk   98 (98)
T 3us4_A           28 LFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRK   98 (98)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEEETTEEESSSSSEESSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             EEEEEeCCCCCCcEEEEEEECCceEEEEEEEeCCEEEECCCCccCCHHHHHHHhhhCCCCCeEcCCccCCC
Confidence            699999999999999999999999999999887776 5667899999999999999999999999999975

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.75  E-value=9.1e-18  Score=150.87  Aligned_cols=125  Identities=26%  Similarity=0.391  Sum_probs=104.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccccC-------
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI-------   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~-------   71 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ | +.+...|.||.+||+||+++++++.+.|..||+++       
T Consensus        33 ~fLvR~s~~~~g~~~ls~~~~~~~~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~~y~~~~~~l~~~L~~p~~~~~~~~~~~  112 (613)
T 2ozo_A           33 LFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPSGLEPQP  112 (613)
T ss_dssp             EEEEEECTTBTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTSCCTTSSSCCCSBCCCCTTCCCBC
T ss_pred             eEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcEEECCCCCcCCHHHHHHHHhhCCCCCCccCCccCCCCCCCCCCc
Confidence            59999999999999999999999999999886554 4 77888999999999999999999999999999762       


Q ss_pred             ----------------------------------------------------------------------CCceeecc--
Q psy13524         72 ----------------------------------------------------------------------NLGIFIPS--   79 (235)
Q Consensus        72 ----------------------------------------------------------------------~~~~~l~~--   79 (235)
                                                                                            .+|-+|.+  
T Consensus       113 ~~~~~~~~~l~~~~~~~~we~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~wyhg~i~r~~ae~~L~~~~~~~G~FLvR~s  192 (613)
T 2ozo_A          113 GVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPR  192 (613)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTSCTTTSTTBCTTCCHHHHHHHHSSSCCCTTCEEEEEC
T ss_pred             cchhHHHHHHHHHHHHHHhhcCchHHHHHhhcCCCchhhcccccccccCCccccCCCHHHHHHHHhhcCCCCceEEEEec
Confidence                                                                                  12233222  


Q ss_pred             ----------------eEEEEEee-cCeeEee-eEEEcchhhhhhccccCCchhhcccccCCCCC
Q psy13524         80 ----------------AIFRVTAV-CGDFYIG-GRQFDSLSDLISYYSSCSDLLKRERLAHPCPP  126 (235)
Q Consensus        80 ----------------~~~~l~~~-~g~~~~g-~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~  126 (235)
                                      .|++|.+. .|.++++ +..|+++.+||++|+..+..++ +++..|++.
T Consensus       193 ~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv~~y~~~~~~l~-~~L~~pC~~  256 (613)
T 2ozo_A          193 KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLI-YCLKEACPN  256 (613)
T ss_dssp             SSTTEEEEEEEETTEEEEEEEEECTTCCEECTTSCEESSHHHHHHHHHHCCTTCS-SCCCSBCCC
T ss_pred             CCCCCEEEEEEECCeEEEEEEEECCCCCEEECCCCCcCCHHHHHHHHhhCCCCce-ecccccccc
Confidence                            89999864 7888887 8899999999999998777665 666666643

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.74  E-value=8.8e-18  Score=118.65  Aligned_cols=75  Identities=25%  Similarity=0.379  Sum_probs=66.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCc----ccceeeCCccccCCCcee
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI----VEGHTLGFPVTRINLGIF   76 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~----~~~~~L~~p~~~~~~~~~   76 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|...++.|..++..|+||.|||+||+.+.+    +..+.|+.||++ .+.|+
T Consensus        38 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~y~~~~~~F~sl~eLV~~y~~~~~~i~~~~~~~L~~Pv~r-~~~We  116 (116)
T 2kk6_A           38 DFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLIDHHYTTKQVITKKSGVVLLNPIPK-DKKWI  116 (116)
T ss_dssp             CEEEEECTTCTTCEEEEEEETTEEEEEEEEEETTEEESSSCEESCHHHHHHHHHHTTCCSCTTTTCCCCSCCCC-CCCCC
T ss_pred             cEEEEECCCCCCcEEEEEEECCeEEEEEEEecCCEEEECCCEeCCHHHHHHHHhhCCCCccCCCCCeECcccCC-CCCCC
Confidence            6999999999999999999999999999998777787788999999999999999876    356899999998 22674

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.74  E-value=7.4e-18  Score=117.13  Aligned_cols=70  Identities=24%  Similarity=0.439  Sum_probs=62.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcC------CcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMG------GRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~------~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ |..+      ...|+||.|||+||+.+++++.+.|..||+|
T Consensus        28 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~~~l~~~L~~P~~r  104 (104)
T 1d4t_A           28 SYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQYPVEK  104 (104)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSSSSSSSSCCCEECCC
T ss_pred             EEEEeeCCCCCCCEEEEEEECCeEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhCCCCCeEECCCcCCC
Confidence            59999999999999999999999999999976555 6443      6799999999999999999999999999975

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.73  E-value=1.1e-17  Score=116.59  Aligned_cols=70  Identities=21%  Similarity=0.366  Sum_probs=62.8

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeCC-eE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKAV-RY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~~-~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.     ++.|+||+|.+.++ +| +.+...|+||.|||+||+.+++++.+.|..||++
T Consensus        29 ~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LI~~y~~~~~~l~~~L~~P~~~  105 (105)
T 1lkk_A           29 SFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQT  105 (105)
T ss_dssp             CEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             eEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECCCceeCCHHHHHHHHhhCCCCCccCCcCcCCC
Confidence            69999999999999999998     67899999998644 45 5567899999999999999999999999999974

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.72  E-value=6.4e-18  Score=116.59  Aligned_cols=70  Identities=24%  Similarity=0.432  Sum_probs=64.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ | +.+...|+||.|||+||+.+++++.+.|+.||++
T Consensus        27 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~~p~~~   98 (100)
T 1rja_A           27 AFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLAAPCRK   98 (100)
T ss_dssp             CEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             EEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCcEEECCCCccCCHHHHHHHHhhCCCCCCCCCCccCCC
Confidence            69999999989999999999999999999985444 5 6678899999999999999999999999999987

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.72  E-value=1.2e-17  Score=116.42  Aligned_cols=70  Identities=29%  Similarity=0.394  Sum_probs=64.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++.| +.+...|+||.|||+||+.+++++.+.|..||++
T Consensus        31 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~Lv~~y~~~~~gl~~~L~~P~~~  101 (106)
T 3eaz_A           31 LFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKVM  101 (106)
T ss_dssp             EEEEEECTTSTTCEEEEEEETTEEEEEECEEETTEEESSSSSCBSSHHHHHHHHHHCCTTSSSCCCEECCC
T ss_pred             EEEEEECCCCCCcEEEEEEeCCceEEEEEEecCCEEEECCCCccCCHHHHHHHHhhCCCCCCeecCCcCCC
Confidence            599999999999999999999999999999877776 5557899999999999999999999999999987

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=3.5e-17  Score=114.91  Aligned_cols=69  Identities=32%  Similarity=0.528  Sum_probs=61.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC-eEEcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~-~~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..+ .|..++..|+||.|||+||+.+++. .+.|+.||+|
T Consensus        42 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~-~~~L~~Pv~r  111 (111)
T 2eo3_A           42 MFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLD-TTTLIEPAPR  111 (111)
T ss_dssp             CEEEEECSSSSSCEEEEEEETTEEEEEEEEEETTTEEEETTCCBSSHHHHHHHHTTSCSS-SSCCCCBCCC
T ss_pred             eEEEEeecCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCCCC-CccCCCcCcC
Confidence            6999999999999999999999999999998544 4756778999999999999999976 7899999975

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.71  E-value=1.2e-17  Score=115.85  Aligned_cols=70  Identities=24%  Similarity=0.419  Sum_probs=62.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-Ec-----CCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LM-----GGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~-----~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ | +.     ....|+||.|||+||+.++.++.+.|..||+|
T Consensus        27 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~~~l~~~L~~P~~R  103 (103)
T 1i3z_A           27 NFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHLSNPIMR  103 (103)
T ss_dssp             EEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSSSSSSSSCCCEECC-
T ss_pred             eEEEEeCCCCCCCEEEEEEECCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhCCCCCeEEcCCccCC
Confidence            59999999999999999999999999999876554 6 44     26799999999999999999999999999975

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=3.6e-17  Score=116.09  Aligned_cols=71  Identities=14%  Similarity=0.382  Sum_probs=63.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc-----ccceeeCCccccC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVTRI   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~~~   71 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++| +.+...|+||.|||+||+.+++     ++.+.|..||+++
T Consensus        39 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LV~~y~~~~l~~~~~gl~~~L~~Pv~~p  115 (118)
T 2dlz_A           39 TYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYSGP  115 (118)
T ss_dssp             BEEEECCSCSSCCEEEEEECSSSEEEEEEEEETTEEESTTSCCBSSHHHHHHHHTTSCTTTTCTTCCCCCCBCCSCC
T ss_pred             EEEEEeCCCCCCCEEEEEEECCcEEEEEEEEcCCEEEEeCCcccCCHHHHHHHHhhCcccccCCCcccEeCCcCCCC
Confidence            699999998899999999999999999999877776 5557899999999999999987     5678999999874

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.70  E-value=3.3e-17  Score=116.84  Aligned_cols=70  Identities=24%  Similarity=0.410  Sum_probs=64.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC-eE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~-~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..+ .| +.+...|+||.|||+||+.+++++.+.|+.||++
T Consensus        41 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~~l~~~L~~P~~~  112 (121)
T 2dly_A           41 AFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNYYTTTSDGLCVKLEKPCLK  112 (121)
T ss_dssp             CEEEEECSSSSSCEEEEEESSSCEEEEEEEECSSSCEEEETTEEESSHHHHHHHHTTCCSSSSSCCCSBCCC
T ss_pred             EEEEEcCCCCCCceEEEEEECCeEEEEEEEEcCCCCEEECCCCccCCHHHHHHHHhhCCCCCceeCCeecCC
Confidence            6999999999999999999999999999988544 44 6678899999999999999999999999999987

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.70  E-value=3.3e-17  Score=115.36  Aligned_cols=70  Identities=24%  Similarity=0.390  Sum_probs=64.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ | +.+...|+||.|||+||+.+.+++.+.|..||++
T Consensus        28 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~~P~~~   99 (112)
T 3k2m_A           28 SFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPK   99 (112)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEESSTTCCBSSHHHHHHHHHHCCTTSSSCCCEECCC
T ss_pred             eEEEEeCCCCCCCEEEEEEeCCcEEEEEEEECCCCcEEECCCCeECCHHHHHHHHhhCCCCCccCCCCCCCC
Confidence            59999999999999999999999999999986554 5 6678899999999999999999999999999987

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=1.4e-17  Score=118.44  Aligned_cols=70  Identities=56%  Similarity=0.962  Sum_probs=64.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ |..++..|.||.|||+||+.++++..+.|+.||++
T Consensus        40 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LI~~y~~~~l~~~~~L~~Pv~~  110 (119)
T 2gsb_A           40 SFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPM  110 (119)
T ss_dssp             EEEEEECSSSTTCEEEEEECSSCBCCCCEEEETTTEEEESSCCBSCHHHHHHHHTTSCSBTTBCCCCCCCC
T ss_pred             eEEEEeCCCCCCceEEEEEECCEEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCccCCCCEeCCccCC
Confidence            59999999999999999999999999999986544 76677899999999999999999999999999987

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.69  E-value=6.5e-17  Score=112.52  Aligned_cols=70  Identities=21%  Similarity=0.309  Sum_probs=60.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeC-Ce---EEcC--CcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-VR---YLMG--GRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~-~~---~~~~--~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+ ++   |..+  ...|+||.|||+||+.+++++.+.|..||+|
T Consensus        30 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~~p~~r  105 (105)
T 1nrv_A           30 LFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCKLKHHCIR  105 (105)
T ss_dssp             EEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCCEECCC
T ss_pred             eEEEEeCCCCCCCEEEEEEeCCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHHHHHhhhCCCCCcEeCCCcCCC
Confidence            599999999999999999999999999998743 32   5343  5799999999999999999999999999975

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.69  E-value=3.8e-17  Score=101.14  Aligned_cols=57  Identities=21%  Similarity=0.475  Sum_probs=51.5

Q ss_pred             ccEEEEeeccCCCCCCCC-cccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDE-LTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~e-L~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      +.+++|+|+|.+ +.++| |+|++||+|.|+++.+++| |.++..+|+.|+||+|||+.+
T Consensus         3 g~~~rAlydy~~-~~~~e~Ls~~~Gd~i~v~~~~~~~W-w~g~~~~G~~G~fP~nyVe~i   60 (60)
T 2lx7_A            3 GARCRTLYPFSG-ERHGQGLRFAAGELITLLQVPDGGW-WEGEKEDGLRGWFPASYVQLL   60 (60)
T ss_dssp             SCEEEESCCCCS-CCCSSCCCCCTTCEEEBSCCCTTSC-EEEECTTSCEEEECGGGEEEC
T ss_pred             CCEEEECcccCC-CCCCCCccCCCCCEEEEeEecCCCe-EEEEeCCCCEEEEcHHHEEEC
Confidence            468999999999 67676 9999999999999999999 999987899999999999864

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.69  E-value=7.8e-17  Score=113.33  Aligned_cols=68  Identities=19%  Similarity=0.287  Sum_probs=57.6

Q ss_pred             CeEEeecCCCCCCEEEEEEE---CCEEeEEEEEeeCCeE-Ec--CCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI---NNQIQRFRIEKKAVRY-LM--GGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~---~~~v~h~~I~~~~~~~-~~--~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||+|++.+ .|+|||+.   ++.|+||+|.+.+++| +.  ....|+||.|||+||+++++++.++|..||-
T Consensus        39 aFLVR~Se~~~-~ySLSVR~~~~~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV~yY~~~adGl~~~L~~~c~  112 (125)
T 3maz_A           39 NMILRPGSDSR-NYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDYFVKETRGNLRPFIASTD  112 (125)
T ss_dssp             SEEEEECTTSS-SEEEEEEECSSSCEEEEEEEEEETTEEEECSSSCEEESSHHHHHHHHHHHTTTCCCBCCC---
T ss_pred             cEEEEeCCCCC-CEEEEEEecCCCCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHHHHHHhCCCcCccccccccc
Confidence            69999998765 89999998   6799999999886666 44  3458999999999999999999999999984

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.69  E-value=4.8e-17  Score=115.69  Aligned_cols=70  Identities=31%  Similarity=0.449  Sum_probs=62.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcC-----CcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMG-----GRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~-----~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ | +.+     ...|.||.|||+||+.+++++.+.|..||++
T Consensus        34 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~eLV~~y~~~~~~l~~~L~~P~~~  110 (119)
T 2ysx_A           34 SFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIEFYKKENMGLVTHLQYPVPL  110 (119)
T ss_dssp             EEEEEECSSCTTSEEEEEECSSCEEEEEEEECTTSCEEECCSCSSSCCCBSSHHHHHHHTTSSSSSSSSCCCEECCC
T ss_pred             EEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeccCCcCCcccCCHHHHHHHHhhCCCCCCeECCCcCCC
Confidence            59999999999999999999999999999875544 6 443     3799999999999999999999999999987

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.69  E-value=3.7e-17  Score=113.51  Aligned_cols=70  Identities=24%  Similarity=0.290  Sum_probs=61.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCc-----ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|...++.|..+...|+||.|||+||+.+++     +..+.|..||++
T Consensus        28 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LI~~y~~~~~p~~~~g~~~~L~~Pv~r  102 (104)
T 1mil_A           28 DFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVER  102 (104)
T ss_dssp             EEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHHHTCCEEETTEEECCCEECCC
T ss_pred             cEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCEEEECCceeCCHHHHHHHHhhCCCccccCCceEEeCccCCC
Confidence            5999999999999999999999999999975444487788999999999999999875     567889999987

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.69  E-value=2.6e-17  Score=116.31  Aligned_cols=70  Identities=26%  Similarity=0.422  Sum_probs=63.7

Q ss_pred             CeEEeecCCCCCCEEEEEEE----CCEEeEEEEEeeC-CeE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI----NNQIQRFRIEKKA-VRY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~----~~~v~h~~I~~~~-~~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.    ++.|+||+|.+.+ ++| +.+...|+||.|||+||+.+++++.+.|..||++
T Consensus        37 ~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~~p~~~  112 (114)
T 1blj_A           37 SFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKKGDGLCQKLTLPCVN  112 (114)
T ss_dssp             CEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHHHHHHHCCSSSSSCCCCCSCC
T ss_pred             eEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEcCCCCEEECCCcccCCHHHHHHHhhhCCCCCceecCccCCC
Confidence            69999999999999999998    6799999999864 444 6678899999999999999999999999999986

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.69  E-value=5.5e-17  Score=116.82  Aligned_cols=70  Identities=24%  Similarity=0.436  Sum_probs=63.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcC-----CcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMG-----GRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~-----~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ | +.+     ...|+||.|||+||+.+++++.+.|..||++
T Consensus        28 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~~gl~~~L~~P~~~  104 (128)
T 1ka6_A           28 SYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQYPVEK  104 (128)
T ss_dssp             CEEEEECSSSTTCEEEEEESSSCEEEEEEEECTTSCEEEECSTTSCCCEESSHHHHHHHTTSSCSSSSSCCCSBCCS
T ss_pred             EEEEeecCCCCCCEEEEEEeCCEEEEEEEEECCCCeEEEeecCCCCCCccCCHHHHHHHHhhCCCCCcEEcCCcCCC
Confidence            69999999899999999999999999999976554 6 442     6899999999999999999999999999997

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.69  E-value=8e-17  Score=114.31  Aligned_cols=70  Identities=24%  Similarity=0.314  Sum_probs=60.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEee-CC-e-EE-c--CCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKK-AV-R-YL-M--GGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~-~~-~-~~-~--~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+. ++ . |+ .  +...|+||.|||+||+.+++++.++|..||++
T Consensus        39 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~~P~~~  114 (117)
T 3pqz_A           39 LFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRGILPCLLRHCCTR  114 (117)
T ss_dssp             EEEEEECCC-CCCEEEEEEETTEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHHHHHHHHCCTTSSSCCCEECC-
T ss_pred             EEEEEecCCCCCcEEEEEEeCCeeEEEEEEEecCCCCEEEEECCCCcccCCHHHHHHHHhhCCCCCcEECCCcCcc
Confidence            59999999999999999999999999999875 33 3 43 3  35799999999999999999999999999986

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.68  E-value=8e-17  Score=112.84  Aligned_cols=70  Identities=30%  Similarity=0.582  Sum_probs=61.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc------ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI------VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~------~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++.| +.+...|+||.|||+||+.+++      ++.+.|++||++
T Consensus        31 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~~gl~~~L~~Pv~~  107 (109)
T 3tkz_A           31 SFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNC  107 (109)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHHSTTSEEETTSCBCCCCEECC-
T ss_pred             EEEEEecCCCCCCEEEEEEECCEEEEEEEEeCCCEEEecCCcccCCHHHHHHHHHhCcCccccCCCceEECCCcccC
Confidence            599999999999999999999999999998866557 5678899999999999999874      556899999976

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.68  E-value=8e-17  Score=108.88  Aligned_cols=79  Identities=27%  Similarity=0.360  Sum_probs=51.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccCCCCCCCcCccccCCCChHH
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKND  212 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~  212 (235)
                      ..++|+|+|.+ ..+++|+|.+||+|.|+.. +++| |.++. .+|+.|+||++||+++..    .. ..+|+++|+|.+
T Consensus         4 ~~~~Alydy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~g~~~~~g~~G~~P~~yv~~~~~----~~-~~~~~~~~~r~~   75 (90)
T 3reb_B            4 IIVVALYDYVS-WSPDDLSFQKGDQMVVLEE-SGEW-WKARSLATRKEGYIPSNYVARVDS----GG-GTSGGGRHRRRQ   75 (90)
T ss_dssp             CEEEESSCBCC-SSTTBCCBCTTCEEEEEEC-SSSE-EEEEETTTCCEEEEEGGGEEEECC-------------------
T ss_pred             EEEEECCccCc-CCcCcCCCCCCCEEEEEEe-CCCE-EEEEECCCCCEEEEehhheEECCC----CC-CcccccCcCHHH
Confidence            56899999999 8999999999999999998 6789 88886 589999999999998753    12 233999999999


Q ss_pred             HHHhhccC
Q psy13524        213 AVDMLVKA  220 (235)
Q Consensus       213 ae~~l~~~  220 (235)
                      |+++|..+
T Consensus        76 ae~lL~~k   83 (90)
T 3reb_B           76 AERMSQIK   83 (90)
T ss_dssp             --------
T ss_pred             HHHHHhHH
Confidence            99999543

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=8.1e-17  Score=115.16  Aligned_cols=69  Identities=19%  Similarity=0.357  Sum_probs=61.6

Q ss_pred             CeEEeecCCCCCCEEEEEEEC--CEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCcc--cceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN--NQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV--EGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~--~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~~--~~~~L~~p~~~   70 (235)
                      +||||+|+ .+|.|+|||+.+  +.|+||+|.+.+++| +.+...|+||.|||+||+++++.  ..+.|+.|+.+
T Consensus        46 ~FLVR~S~-~~g~y~LSv~~~~~~~vkH~rI~~~~~~~~i~~~~~F~sL~eLV~hY~~~~l~~~~~~~L~~P~~~  119 (126)
T 2cr4_A           46 LYCIRNSS-TKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLLLRHPYGY  119 (126)
T ss_dssp             CEEEEECS-STTCEEEEEEETTTTEECCEECEEETTEEESSSSCEESSHHHHHHHHTTSCCSSSSSCCCCSBSSC
T ss_pred             eEEEEecC-CCCCEEEEEEeCCCCCEEEEEEEECCCeEEEcCCccCCCHHHHHHHHhhCCcCCCCCEEeCCcCCC
Confidence            69999999 899999999999  999999999887775 66778999999999999998874  46788999886

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.68  E-value=8.8e-17  Score=115.04  Aligned_cols=69  Identities=25%  Similarity=0.572  Sum_probs=62.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCc-ccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGR-TFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~-~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|+ .+|.|+|||+.++.|+||+|.+.++.|..+.. .|+||.|||+||+.+++++.+.|+.||++
T Consensus        43 ~FLVR~S~-~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~~L~~P~~~  112 (124)
T 2eob_A           43 AFLIRKRE-GTDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYEKHALYRKMRLRYPVTP  112 (124)
T ss_dssp             EEEEECCT-TSSCEEEEEEETTEEEEEEEEESSSCEESSSSCCBSSHHHHHHHHTTSCSSSSCCSCEECCH
T ss_pred             EEEEEecC-CCCCEEEEEEeCCeEEEEEEEECCCEEEECCCCcCCCHHHHHHHHhhCCCCCCcCCCCcCCc
Confidence            59999999 89999999999999999999986555755544 59999999999999999999999999987

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.68  E-value=1.4e-16  Score=114.24  Aligned_cols=70  Identities=24%  Similarity=0.316  Sum_probs=61.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEee--CCeE-E-c--CCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKK--AVRY-L-M--GGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~--~~~~-~-~--~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.  ++.| + .  +...|+||.|||+||+.+++++.++|..||++
T Consensus        51 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL~eLV~~y~~~~~~l~~~L~~P~~r  126 (126)
T 2aug_A           51 VFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVEFYQLNKGVLPCKLKHYCAR  126 (126)
T ss_dssp             EEEEEECSSSSCCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCCEECCC
T ss_pred             EEEEeecCCCCCCEEEEEEcCCeEEEEEEEEECCCCeEEEEeCCCCCccCCHHHHHHHHhhCCCCCceecCCCcCC
Confidence            59999999999999999999999999999874  4443 3 2  35799999999999999999999999999975

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.68  E-value=6.2e-17  Score=113.34  Aligned_cols=69  Identities=35%  Similarity=0.558  Sum_probs=61.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC------------------eEEcCCcccCCHHHHHHHhhhCCcccce
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV------------------RYLMGGRTFECLDAVINRYRKEQIVEGH   62 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~------------------~~~~~~~~F~sl~eLi~~y~~~~~~~~~   62 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++                  .|..+...|+||.|||+||+.+++. .+
T Consensus        23 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~l~~~~F~sl~~LV~~y~~~~l~-~~  101 (109)
T 1ju5_A           23 VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLD-TT  101 (109)
T ss_dssp             EEEEEECSSSTTEEEEEEECSSCEEEEEEECCSSSSCCCCCCSSCCTTCCCCCEEETTEEESSHHHHHHHHHHSCSS-SS
T ss_pred             EEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcccccccccccccccccEEEeCCcccCCHHHHHHHHhhCCCC-Ce
Confidence            5999999999999999999999999999987652                  3766889999999999999999876 46


Q ss_pred             eeCCcccc
Q psy13524         63 TLGFPVTR   70 (235)
Q Consensus        63 ~L~~p~~~   70 (235)
                      .|++||+|
T Consensus       102 ~L~~Pv~r  109 (109)
T 1ju5_A          102 TLIEPVSR  109 (109)
T ss_dssp             CCCEESCC
T ss_pred             ecCccCCC
Confidence            89999975

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.67  E-value=9.6e-17  Score=115.02  Aligned_cols=76  Identities=22%  Similarity=0.362  Sum_probs=65.8

Q ss_pred             CeEEeecCCCCCCEEEEEEE------CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccccCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI------NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRIN   72 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~------~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~~   72 (235)
                      +||||+| +.+|.|+|||+.      ++.|+||+|.+.+++ | +.+...|+||.|||+||+.+++++.+.|..||++  
T Consensus        35 ~FLVR~S-s~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~~l~~~L~~P~~~--  111 (125)
T 2ge9_A           35 GFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELINYHQHNSAGLISRLKYPVSQ--  111 (125)
T ss_dssp             EEEEEEC-SSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESSTTSCBSSHHHHHHHHHCCCTTCSCCSSEECCS--
T ss_pred             eEEEEec-CCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECCCCcCCCHHHHHHHhhhCCCCCceeCCCccCC--
Confidence            5999999 679999999997      479999999887544 5 5567899999999999999999999999999997  


Q ss_pred             Cceeecc
Q psy13524         73 LGIFIPS   79 (235)
Q Consensus        73 ~~~~l~~   79 (235)
                      ..|+...
T Consensus       112 ~~~~~~~  118 (125)
T 2ge9_A          112 QNKNAPS  118 (125)
T ss_dssp             SCCCCCC
T ss_pred             CCCCCcc
Confidence            6676654

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.67  E-value=1.5e-17  Score=115.95  Aligned_cols=70  Identities=24%  Similarity=0.474  Sum_probs=63.0

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeC-CeE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKA-VRY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~-~~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.     ++.|+||+|.+.+ ++| +.+...|+||.|||+||+.+++++.+.|..||++
T Consensus        30 ~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~~p~~~  106 (106)
T 1aot_F           30 TFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVPSHK  106 (106)
T ss_dssp             EECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEETTEEESSHHHHHHHHTTCCTTSSSCSCSSCCC
T ss_pred             EEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECCCCccCCHHHHHHHhccCCCCCcEeecccCCC
Confidence            59999999999999999996     6799999998864 444 6778899999999999999999999999999975

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.67  E-value=1.4e-16  Score=113.43  Aligned_cols=71  Identities=28%  Similarity=0.491  Sum_probs=63.7

Q ss_pred             CeEEeecCCC-CCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc-----ccceeeCCccccC
Q psy13524          1 SFLVRPSDNS-PGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVTRI   71 (235)
Q Consensus         1 ~FLvR~s~~~-~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~~~   71 (235)
                      +||||+|++. +|.|+|||+.++.|+||+|.+.+++| +.+...|+||.+||+||+.+++     ++.+.|..||++.
T Consensus        34 ~FLVR~S~~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LI~~y~~~~~~~~~~~l~~~L~~Pv~r~  111 (120)
T 2iug_A           34 TFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKY  111 (120)
T ss_dssp             EEEEEECSSGGGCSEEEEEEETTEEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCGGGTCGGGCCCCCEECCTT
T ss_pred             EEEEECCCCCCCCcEEEEEEECCEEEEEEEEEcCCEEEECCCCccCCHHHHHHHHHhCccccccCCcceeeCCcCCcC
Confidence            5999999988 89999999999999999999887776 6667899999999999999986     4678999999873

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.67  E-value=3.4e-17  Score=116.42  Aligned_cols=70  Identities=26%  Similarity=0.408  Sum_probs=63.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ | +.+...|+||.|||+||+.+.+++.+.|..||++
T Consensus        39 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~gl~~~L~~P~~~  110 (119)
T 2ecd_A           39 SFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPK  110 (119)
T ss_dssp             BEEEEEESSSTTEEEEEEECSSCEEEECCCCCSSSCCCCCSSCCCSSHHHHHHHHHHCCTTSSSCCCBCCSS
T ss_pred             eEEEEeCCCCCCCEEEEEEECCeEEEEEEEEcCCCCEEEcCCCcCCCHHHHHHHHhhCCCCCceECCCccCC
Confidence            69999999999999999999999999999875544 4 6678899999999999999999999999999987

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.67  E-value=1.3e-16  Score=113.66  Aligned_cols=70  Identities=14%  Similarity=0.397  Sum_probs=63.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc-----ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++| +.+...|+||.|||+||+.+++     ++.+.|+.||++
T Consensus        45 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLV~~y~~~~l~~~~~~l~~~L~~P~~~  120 (122)
T 2lnw_A           45 TYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYKS  120 (122)
T ss_dssp             BEEEEECCCSSEEEEEEEECSSCEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCGGGTCTTCCCCCCBCSSS
T ss_pred             eEEEEeCCCCCCcEEEEEEeCCcEEEEEEEEcCCEEEECCCCeECCHHHHHHHHhhCcCcccCCCcCeeeCCcCCC
Confidence            699999999899999999999999999999888775 6667899999999999999954     667899999976

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.66  E-value=2.5e-16  Score=111.88  Aligned_cols=69  Identities=22%  Similarity=0.402  Sum_probs=61.4

Q ss_pred             CeEEeecCCCCCCEEEEEEEC------CEEeEEEEE--eeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN------NQIQRFRIE--KKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~------~~v~h~~I~--~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+..      +.|+||+|.  +..++ | +.+...|+||.|||+||+.+++++.+.|..||++
T Consensus        33 ~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~~Pv~~  111 (118)
T 3s9k_A           33 AFMVRDS-RTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVTRLRYPVCG  111 (118)
T ss_dssp             CEEEEEC-SSTTCEEEEEEECCSCSSSCEEEEEEEEECSCSSCCEEEECSCCCSCHHHHHHHHHHCCTTSSSCCCCCCCC
T ss_pred             eEEEEee-CCCCCEEEEEEecccccCCCceEEEEEeEEECCCCCEEECCCcccCCHHHHHHHheeCCCCCccCCCCcCCC
Confidence            6999999 7899999999997      899999994  33333 4 7778899999999999999999999999999987

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.66  E-value=1.3e-16  Score=110.26  Aligned_cols=69  Identities=28%  Similarity=0.538  Sum_probs=60.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcc-----cceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV-----EGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~-----~~~~L~~p~~   69 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|...++.|..++..|+||.|||+||+++++.     ..+.|++|++
T Consensus        29 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~~~~~~~~~~L~~Pip  102 (102)
T 2cia_A           29 DFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAPIFTSEHGEKLYLVRALQ  102 (102)
T ss_dssp             EEEEEECSSSTTCEEEEECCSSSCEEEEEEEETTEEEETTEEESSHHHHHHHHHHSCSEECTTSCEECCCEECC
T ss_pred             EEEEEECCCCCCCEEEEEEeCCeeEEEEEEecCCEEEECCcCcCCHHHHHHHHhhCccccCCCCceEEeCCCCC
Confidence            59999999999999999999999999999976667866679999999999999998863     4577888874

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.65  E-value=6e-16  Score=97.52  Aligned_cols=57  Identities=32%  Similarity=0.501  Sum_probs=51.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..++||+|++||+|.|++..++|| |.++. .+|+.|+||+|||+++
T Consensus         6 ~~~~~Alydy~a-~~~~ELs~~~Gd~i~v~~~~~~gW-w~g~~~~~g~~G~~P~nyVe~l   63 (65)
T 2lj0_A            6 LFSYQALYSYIP-QNDDELELRDGDIVDVMEKCDDGW-FVGTSRRTKQFGTFPGNYVKPL   63 (65)
T ss_dssp             SCEEEESSCBCC-SSTTBCCBCTTCEEEEEEECTTSE-EEEEETTTCCEEEEETTSEEEC
T ss_pred             CEEEEEceeECC-CCcCCcCCCCCCEEEEeEeCCCCE-EEEEECCCCCEEEEehhHeEEE
Confidence            457899999999 899999999999999999999999 88765 3799999999999986

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.65  E-value=3e-16  Score=114.33  Aligned_cols=70  Identities=34%  Similarity=0.551  Sum_probs=61.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeC-C---eE-EcCCcccCCHHHHHHHhhhCCc---ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-V---RY-LMGGRTFECLDAVINRYRKEQI---VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~-~---~~-~~~~~~F~sl~eLi~~y~~~~~---~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.. +   .| +.+...|+||.|||+||+++++   ++.+.|..||++
T Consensus        52 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~~l~~~~~F~sl~eLI~~y~~~~l~~~gl~~~L~~Pv~~  129 (138)
T 2dx0_A           52 TFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHLRCAEFELRLTDPVPN  129 (138)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSCBSSHHHHHHHTTTSCCCCGGGSSCCCCBCC-
T ss_pred             EEEEEeCCCCCCCeEEEEEECCeEEEEEEEEecCCCceEEEeCCCCcCCCHHHHHHHHhhCCCCCCCcccccCccCCC
Confidence            699999999899999999999999999998763 2   34 6678899999999999999986   668899999987

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.65  E-value=3.1e-16  Score=114.22  Aligned_cols=70  Identities=20%  Similarity=0.441  Sum_probs=61.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc-----ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|...++.| +.+...|+||.|||+||+++++     ++.+.|+.||++
T Consensus        49 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~eLV~~y~~~~l~~~~~~l~~~L~~Pv~~  124 (138)
T 2crh_A           49 TFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE  124 (138)
T ss_dssp             EEEEECCSSTTCCCEEEEEETTEEEEEECEEETTEEESSTTCCBSSHHHHHHHHTTSCGGGTCTTCCCCCCEESSC
T ss_pred             EEEEEECCCCCCCEEEEEEECCeEEEEEEEeCCCEEEECCCCccCCHHHHHHHHHhCccccccCCcCcccCCccCC
Confidence            599999999899999999999999999997655556 5557899999999999999885     467899999987

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.64  E-value=5.8e-16  Score=108.87  Aligned_cols=69  Identities=25%  Similarity=0.415  Sum_probs=60.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcC-CcccCCHHHHHHHhhhCC-----cccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMG-GRTFECLDAVINRYRKEQ-----IVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~-~~~F~sl~eLi~~y~~~~-----~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+.++.|+||+|.+.+++| +.+ ...|+||.|||+||++++     .++.+.|..||++
T Consensus        33 ~FLVR~S-~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~l~~~~~gl~~~L~~P~~~  108 (112)
T 1h9o_A           33 TFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA  108 (112)
T ss_dssp             EEEEEEC-SSTTCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSCGGGTCTTCCCCCCEETTC
T ss_pred             eEEEeec-CCCCCEEEEEEECCEEEEEEEEEcCCceEEeCCCCCcCCHHHHHHHHhhCcccccCCCcCeeCCCCcCC
Confidence            5999999 7899999999999999999999888874 444 569999999999999864     4567899999986

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.64  E-value=1.8e-16  Score=111.22  Aligned_cols=68  Identities=19%  Similarity=0.352  Sum_probs=60.0

Q ss_pred             CeEEeecCCCCCCEEEEEEE------CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI------NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~------~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||+| +.+|.|+|||+.      ++.|+||+|.+.+++ | +.+...|+||.|||+||+.+++++.++|..||+
T Consensus        35 ~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~~Pv~  110 (110)
T 2ekx_A           35 AFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNSAGMITRLRHPVS  110 (110)
T ss_dssp             EEEEEEC-SSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESSTTCCCSCHHHHHHHHHHSCCSSSCCCCEECC
T ss_pred             eEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECCCCccCCHHHHHHHHeeCCCCCceecCccCC
Confidence            5999999 579999999997      468999999987554 5 556789999999999999999999999999984

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.64  E-value=5.1e-16  Score=117.91  Aligned_cols=70  Identities=21%  Similarity=0.366  Sum_probs=62.9

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.     ++.|+||+|.+..++ | +.+...|+||.+||+||+.+++++.++|..||++
T Consensus        99 ~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~gl~~~L~~Pc~~  175 (175)
T 4d8k_A           99 SFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQT  175 (175)
T ss_dssp             CEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESSTTSEESSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             EEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECCCCccCCHHHHHHHHhhCCCCCcccCCCcCCC
Confidence            69999999999999999998     779999999876544 5 5566899999999999999999999999999974

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.63  E-value=5.1e-16  Score=109.43  Aligned_cols=69  Identities=25%  Similarity=0.329  Sum_probs=61.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcc----cceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV----EGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~----~~~~L~~p~~~   70 (235)
                      +||||+|++.+ .|+|||+.++.|+||+|...++.|..++..|+||.|||+||+.+.+.    ..+.|..||++
T Consensus        37 ~FLVR~S~~~~-~y~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LV~~y~~~~~~~~~~~~~~L~~Pv~r  109 (114)
T 1wqu_A           37 DFLVRESQGKQ-EYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPS  109 (114)
T ss_dssp             EEEEEECSSSC-CEEEEEEETTEEEEEECEECSSSEESSSCCBSSHHHHHHHHHHHCCCSCTTTCCCCCEECCS
T ss_pred             eEEEEEcCCCC-CEEEEEEECCEEEEEEEEecCCEEEECCCCCCCHHHHHHHHHHCCCCcCCCCCcEECcccCC
Confidence            59999999877 99999999999999999887666888889999999999999987653    47899999987

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.63  E-value=9.2e-16  Score=107.66  Aligned_cols=69  Identities=22%  Similarity=0.318  Sum_probs=57.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCccc------ceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVE------GHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~------~~~L~~p~~   69 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ |..+...|+||.|||+||+.+++..      .+.|..|++
T Consensus        35 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~~~~~~~~~v~L~~~v~  110 (111)
T 2hdv_A           35 VFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHFRVHPIPLESGGSSDVVLVSYVP  110 (111)
T ss_dssp             EEEEEECSSCTTEEEEEEEETTEEEEEEEEECTTCCEEETTEEESSHHHHHHHHTTSCCC-------CCCCCEECC
T ss_pred             eEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEeCCceeCCHHHHHHHHhhCCcccccCCccceEcccccc
Confidence            59999999999999999999999999999986555 7666889999999999999988654      445555553

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.63  E-value=7.3e-16  Score=112.74  Aligned_cols=70  Identities=24%  Similarity=0.424  Sum_probs=60.3

Q ss_pred             CeEEeecCC--CCCCEEEEEEECCEEeEEEEEee-CCe-EEcC-----CcccCCHHHHHHHhhhCCccc---------ce
Q psy13524          1 SFLVRPSDN--SPGDYSLFFHINNQIQRFRIEKK-AVR-YLMG-----GRTFECLDAVINRYRKEQIVE---------GH   62 (235)
Q Consensus         1 ~FLvR~s~~--~~g~~~lsv~~~~~v~h~~I~~~-~~~-~~~~-----~~~F~sl~eLi~~y~~~~~~~---------~~   62 (235)
                      +||||+|++  .+|.|+|||+.++.|+||+|.+. +++ |..+     ...|+||.|||+||+.+++++         .+
T Consensus        47 ~FLVR~S~~~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~sl~eLV~~y~~~~~~l~~~~~~~~~~~  126 (141)
T 2eo6_A           47 SFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDST  126 (141)
T ss_dssp             CBCEEECSTTCSSCSEEEEEEETTEEEEEEECEETTTTEECSSSCCTTCCCBSSHHHHHHHHHHSCCCCCCSSSCCCCCC
T ss_pred             eEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEeCCCCEEEEccccCCCCccCCHHHHHHHHhhCCccceecccCCCCce
Confidence            699999997  78999999999999999999864 344 6544     579999999999999999887         57


Q ss_pred             eeCCcccc
Q psy13524         63 TLGFPVTR   70 (235)
Q Consensus        63 ~L~~p~~~   70 (235)
                      .|++||.+
T Consensus       127 ~L~~Pv~~  134 (141)
T 2eo6_A          127 RLKYAVKV  134 (141)
T ss_dssp             CCCCBCCC
T ss_pred             EeCcCccc
Confidence            89999875

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=3.7e-16  Score=112.05  Aligned_cols=69  Identities=20%  Similarity=0.381  Sum_probs=61.4

Q ss_pred             CeEEeecCCCCCCEEEEEEE------CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI------NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~------~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+.      ++.|+||+|.+..++ | +.+...|+||.|||+||+.+++++.+.|..||++
T Consensus        40 ~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~~l~~~L~~P~~~  116 (125)
T 2dm0_A           40 AFIVRDS-RHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPELIWYHQHNAAGLMTRLRYPVGL  116 (125)
T ss_dssp             CBCEEEE-TTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSSSCCCSSHHHHHHHHTTCCCSSSCCCCSBCCS
T ss_pred             EEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECCCCccCCHHHHHHHhhhCCCCCccCCCCccCC
Confidence            6999999 578999999998      458999999987654 5 5567899999999999999999999999999987

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.62  E-value=6e-16  Score=109.93  Aligned_cols=70  Identities=21%  Similarity=0.328  Sum_probs=61.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC-eE-Ec-CCcccCCHHHHHHHhhhCCcc-cceeeCCccccC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RY-LM-GGRTFECLDAVINRYRKEQIV-EGHTLGFPVTRI   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~-~~-~~-~~~~F~sl~eLi~~y~~~~~~-~~~~L~~p~~~~   71 (235)
                      +||||+|++.+| |+|||+.++.|+||+|.+.++ +| +. ....|+||.|||+||+.+++. .++.|..||++.
T Consensus        39 ~FLVR~S~~~~~-y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~~y~~~~l~~~~~~L~~P~~~~  112 (119)
T 2cs0_A           39 SFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELLTQPCRQK  112 (119)
T ss_dssp             CEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSCCSSCCCCCCSBCCCS
T ss_pred             EEEEEecCCCCC-EEEEEEECCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHHHHhhCcCCCCCCEeCccCCCC
Confidence            699999999888 999999999999999998765 46 54 367999999999999999976 568999999873

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.62  E-value=1.4e-15  Score=107.57  Aligned_cols=70  Identities=24%  Similarity=0.450  Sum_probs=60.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCccc--ceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVE--GHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~--~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ |..++..|+||.|||+||+++++..  ...|..|++.
T Consensus        30 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~eLV~~y~~~~l~~~~~~~L~~~~~~  102 (117)
T 3ov1_A           30 AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQV  102 (117)
T ss_dssp             BEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTTSCSCSSSCCCCBCCCCC
T ss_pred             cEEEEeCCCCCCCEEEEEecCCceEEEEEEECCCCeEEECCCCcCCHHHHHHHHhhCCCCCCCceEecCCCcC
Confidence            69999999999999999999999999999886555 7666789999999999999998743  4567777665

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.62  E-value=1.4e-15  Score=103.86  Aligned_cols=59  Identities=27%  Similarity=0.607  Sum_probs=53.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIV   59 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~   59 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ |..++..|+||.|||+||+.+++.
T Consensus        27 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~   86 (96)
T 1jyr_A           27 AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS   86 (96)
T ss_dssp             BEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTSSCSC
T ss_pred             EEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCCCC
Confidence            69999999999999999999999999999986554 766679999999999999998864

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.61  E-value=5.5e-16  Score=111.85  Aligned_cols=69  Identities=23%  Similarity=0.360  Sum_probs=61.9

Q ss_pred             CeEEeecCCCCCCEEEEEEEC---------------CEEeEEEEEeeCCeE-E---cCCcccCCHHHHHHHhhhCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN---------------NQIQRFRIEKKAVRY-L---MGGRTFECLDAVINRYRKEQIVEG   61 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~---------------~~v~h~~I~~~~~~~-~---~~~~~F~sl~eLi~~y~~~~~~~~   61 (235)
                      +||||+|++.+|.|+|||+..               +.|+||+|.+.+++| +   .....|+||.|||+||+.+++++.
T Consensus        43 ~FLVR~S~s~~g~y~LSv~~~~~~~~~~~~~g~~~~~~v~H~~I~~~~~g~~l~g~~~~~~F~SL~eLV~~y~~~~~~L~  122 (131)
T 2kno_A           43 AFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGVKIKGCPSEPYFGSLSALVSQHSISPISLP  122 (131)
T ss_dssp             BEEEEECSSSTTEEEEEEECSCCSSSSSSCCSCHHHHHEEEEEEECCSSCCCEETCSSCCCCCSHHHHHHTTTTCCSSCS
T ss_pred             eEEEecCCCCCCCEEEEEEeCCCCcccccccccccCCceEEEEEEECCCCCEEecCCCCCccCCHHHHHHHHhhCCCCCC
Confidence            699999999999999999996               379999999877775 5   367799999999999999999999


Q ss_pred             eeeCCccc
Q psy13524         62 HTLGFPVT   69 (235)
Q Consensus        62 ~~L~~p~~   69 (235)
                      ++|..|+.
T Consensus       123 ~~L~~P~~  130 (131)
T 2kno_A          123 CCLRIPSK  130 (131)
T ss_dssp             SCCBCSSC
T ss_pred             eECCCcCC
Confidence            99999983

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.60  E-value=3.8e-16  Score=110.72  Aligned_cols=66  Identities=18%  Similarity=0.361  Sum_probs=58.7

Q ss_pred             CeEEeecCCCCCCEEEEEEE----CCEEeEEEEEeeCCeE-EcCCccc--CCHHHHHHHhhhCCcccceeeCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI----NNQIQRFRIEKKAVRY-LMGGRTF--ECLDAVINRYRKEQIVEGHTLGF   66 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~----~~~v~h~~I~~~~~~~-~~~~~~F--~sl~eLi~~y~~~~~~~~~~L~~   66 (235)
                      +||||+|++.+|.|+|||+.    ++.|+||+|.+.++.| +.+...|  +||.|||+||+.+++++.++|.+
T Consensus        45 ~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~g~~~i~~~~~F~~~sL~eLV~~y~~~~~gl~~~L~~  117 (118)
T 2el8_A           45 NLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKALVPFLL  117 (118)
T ss_dssp             SBEEEECCSSSSSEEEEECCCBTTBCCCEEECBCCBTTBCCBSSSSCCCCSSHHHHHHHHHHHSSSCCCBCCC
T ss_pred             EEEEeeCCCCCCceEEEEEEecCCCCcEEEEEEEEcCCEEEEeCCCeECCCCHHHHHHHHhhCCCCCeEeeec
Confidence            69999999999999999999    8899999998865566 6667899  99999999999999999887754

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.59  E-value=4.1e-15  Score=112.05  Aligned_cols=70  Identities=20%  Similarity=0.217  Sum_probs=60.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCC-------cccCCHHHHHHHhhhCCcc------------c
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGG-------RTFECLDAVINRYRKEQIV------------E   60 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~-------~~F~sl~eLi~~y~~~~~~------------~   60 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++| +.+.       ..|+||.|||+||+.+++.            .
T Consensus        40 ~FLVR~S~~~~~~~~LSv~~~~~v~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~eLI~~y~~~~~~~~~~~~~~~~~~~  119 (169)
T 2c9w_A           40 TFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTV  119 (169)
T ss_dssp             CEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHHTC--------------
T ss_pred             EEEEecCCCCCCeEEEEEEECCeeEEEEEEEeCCEEEEccccCccccCCCCCCHHHHHHHHHhCcCCCcccccCCCCcCc
Confidence            699999999899999999999999999999877776 4442       8999999999999987753            4


Q ss_pred             ceeeCCcccc
Q psy13524         61 GHTLGFPVTR   70 (235)
Q Consensus        61 ~~~L~~p~~~   70 (235)
                      .+.|++|+.+
T Consensus       120 ~~~L~~P~~~  129 (169)
T 2c9w_A          120 HLYLTKPLYT  129 (169)
T ss_dssp             CCCCCCBCCS
T ss_pred             cceecCcccc
Confidence            6789999976

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.58  E-value=2.6e-15  Score=97.54  Aligned_cols=65  Identities=26%  Similarity=0.456  Sum_probs=51.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEeccCCCCCCCcCccccCC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFHPE  207 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~  207 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+. +.+| |.++. +|+.|+||++||+.+.        .+|||+.
T Consensus         8 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~--------~~w~~~t   73 (74)
T 1gbq_A            8 GSMEAIAKYDFKA-TADDELSFKRGDILKVLNEECDQNW-YKAEL-NGKDGFIPKNYIEMKP--------HPEFIVT   73 (74)
T ss_dssp             --CEEEESSCBCC-SSTTBCCBCTTCEEECCBCSSCSSE-EEEEE-TTEEEEEEGGGEEEEC---------------
T ss_pred             CCeEEEECccCCC-CCCCeeeEcCCCEEEEeEecCCCCE-EEEEE-CCCEEEEehHhEEEcC--------CcccccC
Confidence            3457999999999 89999999999999999987 5689 99997 9999999999999763        5799863

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.58  E-value=4.5e-15  Score=108.55  Aligned_cols=66  Identities=21%  Similarity=0.137  Sum_probs=56.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-Ec---CCcccCCHHHHHHHhhhCCc-ccceeeCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LM---GGRTFECLDAVINRYRKEQI-VEGHTLGF   66 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~---~~~~F~sl~eLi~~y~~~~~-~~~~~L~~   66 (235)
                      +||||+|++.+|.|+||++.++.|+||+|.+.++.| +.   ....|+||.|||+||+.+++ ++.|.|..
T Consensus        47 ~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~~~~F~sl~eLI~~y~~~~~~gl~c~l~~  117 (141)
T 2vif_A           47 SFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIGDSENGAFCYSRS  117 (141)
T ss_dssp             CEEEEECSSTTCSEEEEEEETTEEEEEEEEEETTEEEETTCCSCCCBSSHHHHHHHHHHHHHHTCCEEESC
T ss_pred             eEEEEecCCCCCCEEEEEEECCEEEEEEEEEECCEEEEeecCCCCccCCHHHHHHHHhhCCCCCcceeccc
Confidence            699999999899999999999999999999887776 55   47899999999999998873 55444433

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.57  E-value=4e-15  Score=102.41  Aligned_cols=60  Identities=27%  Similarity=0.616  Sum_probs=53.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVE   60 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~   60 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.+++ |..++..|+||.|||+||+.+++..
T Consensus        32 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~~   92 (100)
T 1r1p_A           32 FFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSISK   92 (100)
T ss_dssp             BEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCEESSHHHHHHHHTTSCSSS
T ss_pred             EEEEEecCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeCCEeCCHHHHHHHHHhCCCCC
Confidence            69999999999999999999999999999986544 7666789999999999999988754

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.57  E-value=9.6e-15  Score=96.73  Aligned_cols=67  Identities=25%  Similarity=0.500  Sum_probs=56.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccCCCCCCCcCcccc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETIDPNTVFDWFH  205 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~  205 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|+...+++| |.+.. +|+.|+||++||+.+.....    .+||+
T Consensus        16 ~~~~~~Alydy~a-~~~~eLsf~~Gd~i~Vl~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~~~~----~p~~~   82 (83)
T 1neg_A           16 GKELVLALYDYQE-KSPREVTMKKGDILTLLNSTNKDW-WKVEV-NDRQGFVPAAYVKKLAAAWS----HPQFE   82 (83)
T ss_dssp             -CCEEEESSCBCC-SSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEECCTTSC----CCCC-
T ss_pred             CceEEEEccccCC-CCCCccccCCCCEEEEEEecCCCE-EEEEE-CCeEEEEEHHHEEECCCCCC----CCCcC
Confidence            3467999999999 899999999999999999988999 88876 99999999999999865322    46764

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.56  E-value=6.1e-15  Score=117.57  Aligned_cols=69  Identities=25%  Similarity=0.594  Sum_probs=64.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|+ .+|.|+||++.++.|+||+|.+.++.|+.++..|+||.+||+||+++++++.+.|+.||++
T Consensus       146 ~FLVR~s~-~~g~y~Lsv~~~~~v~H~~I~~~~~~~~~~~~~F~sL~~Lv~~y~~~p~~~~~~L~~Pv~~  214 (246)
T 4fbn_A          146 AFLVRKRN-EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYRKMKLRYPINE  214 (246)
T ss_dssp             EEEEEECS-STTEEEEEEEETTEEEEEEEEEETTEEEETTEEESCHHHHHHHHHHSCSBTTBCCCEECSH
T ss_pred             eEEEEecC-CCCCEEEEEEeCCCeEEEEEEeCCCEEEeCCCccCCHHHHHHHhCcCCCCCCcCCCCcCCC
Confidence            59999985 5899999999999999999998777788889999999999999999999999999999976

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.56  E-value=8.8e-15  Score=117.46  Aligned_cols=69  Identities=22%  Similarity=0.442  Sum_probs=63.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+.++.|+||+|.+..++ | +.+...|+||.+||+||+.+++++.+.|+.||++
T Consensus       183 ~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~~p~~r  253 (254)
T 1a81_A          183 KFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQK  253 (254)
T ss_dssp             CEEEEEC-SSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTTCCTTSSSCCCCBCCC
T ss_pred             eEEEEec-CCCCCEEEEEEECCEEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHHHCCCCCCeecCCcCCC
Confidence            6999999 789999999999999999999986554 5 5568899999999999999999999999999986

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.56  E-value=1.1e-14  Score=89.99  Aligned_cols=55  Identities=24%  Similarity=0.539  Sum_probs=51.4

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      .++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+.+.
T Consensus         3 ~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A            3 EAIVEFDYQA-QHDDELTISVGEIITNIRKEDGGW-WEGQI-NGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CEEESSCBCC-CSTTBCCBCTTCEEEEEECCTTTE-EEEEE-TTEEEEEEGGGEEECC
T ss_pred             EEEECcccCC-CCcCEeeECCCCEEEEEEeCCCCE-EEEEE-CCeEEEEehHHeEEcC
Confidence            5799999999 899999999999999999989999 99998 8999999999999864

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.56  E-value=1.2e-14  Score=96.74  Aligned_cols=73  Identities=25%  Similarity=0.353  Sum_probs=54.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccCCCCCCCcCccccCCCChH
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKN  211 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~  211 (235)
                      ...++|+|+|.+ ..+++|+|.+||+|.|+.+.+++| |.++. .+|+.|+||++||+++..    .+..+|...+..+.
T Consensus         6 ~~~~~Alydy~a-~~~~eLsf~~Gd~i~vl~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~~----~~~e~~~~~~~~~~   79 (84)
T 4ag1_C            6 VTLFVALYDYNA-TRWTDLSFHKGEKFQILEFGPGDW-WEARSLTTGETGYIPSNYVAPVDS----IQGEQKLISEEDLH   79 (84)
T ss_dssp             CCEEEESSCBCC-SBTTBCCBCTTCEEEEEECCSSSE-EEEEETTTCCEEEEEGGGEEETTT----CC------------
T ss_pred             CEEEEEcccCCC-CCCCcccccCCCEEEEEEecCCCe-EEEEECCCCCEEEEehHHeEECCC----cccccCCCcccChh
Confidence            467999999999 889999999999999999989999 88887 489999999999998643    55678888776654

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.56  E-value=1.7e-14  Score=91.29  Aligned_cols=57  Identities=26%  Similarity=0.480  Sum_probs=52.4

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+++.+.+| |.++. +|+.|+||++||+.+
T Consensus         8 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B            8 LGITAIALYDYQA-AGDDEISFDPDDIITNIEMIDDGW-WRGVC-KGRYGLFPANYVELR   64 (65)
T ss_dssp             CCSCEEECSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CceEEEEEeeECC-CCcCEeeEecCCEEEEEEecCCCE-EEEEE-CCcEEEEehHHeEEC
Confidence            4467999999999 889999999999999999988999 99997 999999999999875

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.56  E-value=6.9e-15  Score=118.07  Aligned_cols=69  Identities=19%  Similarity=0.303  Sum_probs=62.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+.++.|+||+|.+..++ | +.+...|+||.+||+||+.+++++.+.|..||++
T Consensus       184 ~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~~p~~r  254 (254)
T 2oq1_A          184 KFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYCLKEACPN  254 (254)
T ss_dssp             EEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             eEEEEec-CCCCCEEEEEEECCeEEEEEEEEcCCCCEEECCCceECCHHHHHHHHHhCCCCCCeeCCccCcC
Confidence            5999999 789999999999999999999976554 5 5567899999999999999999999999999975

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.56  E-value=1.3e-14  Score=91.66  Aligned_cols=57  Identities=32%  Similarity=0.540  Sum_probs=52.6

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+.+..
T Consensus         2 ~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~fP~~yv~~~~~   58 (65)
T 2nwm_A            2 KAARLKFDFQA-QSPKELTLQKGDIVYIHKEVDKNW-LEGEH-HGRLGIFPANYVEVLPL   58 (65)
T ss_dssp             CEEEECSCBCC-CSTTBCCBCTTCEEEEEECCTTTC-EEEEE-TTEEEEECGGGEEECCC
T ss_pred             cEEEEeeeECC-CCcCccCCcCCCEEEEEEecCCCE-EEEEE-CCcEEEEehhhEEEcCC
Confidence            46899999999 899999999999999999989999 99996 99999999999998763

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.56  E-value=1.5e-14  Score=90.03  Aligned_cols=56  Identities=25%  Similarity=0.479  Sum_probs=51.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+.+
T Consensus         4 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            4 HMRAEALFDFTG-NSKLELNFKAGDVIFLLSRINKDW-LEGTV-RGATGIFPLSFVKIL   59 (60)
T ss_dssp             SCEEEESSCBCC-SSTTBCCBCTTCEEEEEEECSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCc-CCCCCccCCCCCEEEEEEeCCCCe-EEEEE-CCCEEEechHHEEEC
Confidence            357899999999 889999999999999999989999 99997 899999999999875

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.56  E-value=1.4e-14  Score=89.49  Aligned_cols=56  Identities=20%  Similarity=0.437  Sum_probs=51.8

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|++..+++| |.++. +|+.|+||++||++++
T Consensus         2 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A            2 RWARALYDFEA-LEEDELGFRSGEVVEVLDSSNPSW-WTGRL-HNKLGLFPANYVAPMM   57 (58)
T ss_dssp             CEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEECC
T ss_pred             eEEEECccCCC-CCcCCCCCCCCCEEEEEEECCCCE-EEEEE-CCeEEEeeHHHeEEcc
Confidence            46899999999 889999999999999999989999 99998 8999999999999763

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.56  E-value=1.5e-14  Score=91.38  Aligned_cols=59  Identities=27%  Similarity=0.615  Sum_probs=53.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|++..+++| |.++..+|+.|+||++||++..+
T Consensus         3 ~~~~~Alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~~   61 (65)
T 1b07_A            3 AEYVRALFDFNG-NDEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVEKYHH   61 (65)
T ss_dssp             CCEEEESSCBCC-SSTTBCCBCTTCEEEEEECSSSSE-EEEECTTSCEEEEEGGGEEECC-
T ss_pred             ceEEEECCcCCC-CCCCccCCcCCCEEEEEEecCCCe-EEEEECCCCEEEEChHHEeecCC
Confidence            357899999999 899999999999999999989999 99985589999999999998753

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.55  E-value=1.7e-14  Score=91.99  Aligned_cols=57  Identities=23%  Similarity=0.454  Sum_probs=53.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+.+..
T Consensus         4 ~~~~Alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   60 (68)
T 2ew3_A            4 PCCRGLYDFEP-ENQGELGFKEGDIITLTNQIDENW-YEGMI-HGESGFFPINYVEVIVP   60 (68)
T ss_dssp             CEEEESSCBCC-CSTTBCCBCTTCEEEEEEESSSSE-EEEEE-TTEEEEEEGGGEEESCC
T ss_pred             CEEEEeeeECC-CCCCccCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEeeHHHEEEcCc
Confidence            57899999999 889999999999999999989999 99998 99999999999998764

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.55  E-value=1.6e-14  Score=89.53  Aligned_cols=56  Identities=29%  Similarity=0.631  Sum_probs=51.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++. +++.|+||++||+++
T Consensus         4 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X            4 GSVVRAKFNFQQ-TNEDELSFSKGDVIHVTRVEEGGW-WEGTH-NGRTGWFPSNYVREI   59 (59)
T ss_dssp             CCEEEESSCBCC-SSTTBCCBCTTCEEEEEEECTTSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECceeCC-CCcCCcCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEEeHHHEEEC
Confidence            467999999999 899999999999999999989999 99998 999999999999864

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.55  E-value=1.4e-14  Score=89.23  Aligned_cols=56  Identities=29%  Similarity=0.645  Sum_probs=50.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++..+|+.|+||++||+++
T Consensus         2 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~   57 (57)
T 1cka_A            2 EYVRALFDFNG-NDEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVEKY   57 (57)
T ss_dssp             CEEEESSCBCC-SSTTBCCBCTTCEEEEEECSSSSE-EEEECTTSCEEEEEGGGEEC-
T ss_pred             cEEEECCcCCC-CCCCCCCCCCCCEEEEEEecCCCc-EEEEeCCCCEEEEeHHHEEEC
Confidence            46899999999 889999999999999999988999 999855899999999999853

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.55  E-value=1.4e-14  Score=89.45  Aligned_cols=55  Identities=24%  Similarity=0.425  Sum_probs=50.4

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEec
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDL  191 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~  191 (235)
                      .++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++.. +|+.|+||++||+.+
T Consensus         2 ~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A            2 WATAEYDYDA-AEDNELTFVENDKIINIEFVDDDW-WLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEECceECC-CCCCCcccCCCCEEEEEEecCCCc-EEEEECCCCCEEEechHHeEEC
Confidence            5799999999 889999999999999999989999 999874 499999999999875

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.55  E-value=1.9e-14  Score=88.95  Aligned_cols=55  Identities=16%  Similarity=0.392  Sum_probs=51.4

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+++.+++| |.++. +|+.|+||++||+++
T Consensus         3 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A            3 EYVEALYQFDP-QQDGDLGLKPGDKVQLLEKLSPEW-YKGSC-NGRTGIFPANYVKPA   57 (58)
T ss_dssp             CEEEECSCBCC-CSTTBCCBCTTCEEEEEEECSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECceECC-CCCCCccCCCCCEEEEEEecCCCE-EEEEE-CCcEEEeeHHHEEEc
Confidence            57899999999 899999999999999999989999 99998 999999999999864

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.55  E-value=2e-14  Score=89.41  Aligned_cols=56  Identities=32%  Similarity=0.610  Sum_probs=51.9

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ +.+++|+|++||+|.|+++.+++| |.++. +++.|+||++||+.+
T Consensus         5 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            5 SPQCKALYAYDA-QDTDELSFNANDIIDIIKEDPSGW-WTGRL-RGKQGLFPNNYVTKI   60 (60)
T ss_dssp             SCEEEESSCBCC-SSTTBCCBCTTCEEEEEEECTTSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCc-CCcCCcCCCCCCEEEEEEecCCCE-EEEEE-CCEEEEEcHHHEEEC
Confidence            467999999999 899999999999999999989999 99998 899999999999864

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.54  E-value=5.9e-15  Score=93.23  Aligned_cols=57  Identities=25%  Similarity=0.623  Sum_probs=52.6

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ +++++|+|++||+|.|+.+.+++| |.++. +|+.|+||++||+.+..
T Consensus         2 ~~~~Alydy~~-~~~~eLs~~~Gd~i~v~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~~   58 (65)
T 2fei_A            2 RQCKVLFEYIP-QNEDELELKVGDIIDINEEVEEGW-WSGTL-NNKLGLFPSNFVKELEL   58 (65)
T ss_dssp             CEEECSSCCCC-CSTTBCCCCTTCEEECCCCSSSSE-EEEES-SSCEEEEETTTSCBCCC
T ss_pred             eEEEECccCCc-CCcCccCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEecHHHEEEcCC
Confidence            46899999999 899999999999999999989999 99987 89999999999998754

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.54  E-value=2e-14  Score=90.01  Aligned_cols=56  Identities=23%  Similarity=0.390  Sum_probs=51.4

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..++||+|++||+|.|+...+++| |.++. .+|+.|+||++||+++
T Consensus         4 ~~~~al~~y~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~~~~g~~G~fP~~yv~~~   60 (62)
T 2fpe_A            4 QTHRAIFRFVP-RHEDELELEVDDPLLVELQAEDYW-YEAYNMRTGARGVFPAYYAIEV   60 (62)
T ss_dssp             CCEEECSCBCC-SSTTBCCBCTTCEEEEEEECTTSE-EEEEETTTCCEEEEEGGGEEEC
T ss_pred             CEEEECccCCc-cCcCcCcCCCCCEEEEEEecCCCE-EEEEECCCCCEEEechHHEEEC
Confidence            56899999999 899999999999999999989999 98884 5899999999999976

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.54  E-value=3.1e-14  Score=93.81  Aligned_cols=59  Identities=27%  Similarity=0.357  Sum_probs=53.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCC-eeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDG-WLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~-w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ .++++|+|++||+|.|+++.+.+ | |.++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~~alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~~   68 (80)
T 2i0n_A            9 FAKYARALKDYNV-SDTSLLPFKRNDIITITFKDQENKW-FMGQL-NGKEGSFPVDHVEILLS   68 (80)
T ss_dssp             CCCEEEESSCBCC-CSSSSCCBCSSEEEEEEEESSSSSE-EEEEE-TTEEEEEEGGGEEEESS
T ss_pred             CCeEEEECCCCCc-CCCCCcCCCCCCEEEEEEecCCCCE-EEEEE-CCcEEEechHHEEECCC
Confidence            4578999999999 89999999999999999998777 9 99997 89999999999998864

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.54  E-value=2.5e-14  Score=88.35  Aligned_cols=55  Identities=22%  Similarity=0.512  Sum_probs=51.4

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+++
T Consensus         3 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~   57 (58)
T 1sem_A            3 KFVQALFDFNP-QESGELAFKRGDVITLINKDDPNW-WEGQL-NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCC-SSTTBCCBCTTCEEEEEECSSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECcCCCC-CCCCCcCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEechHHeEEC
Confidence            46899999999 889999999999999999988999 99998 899999999999875

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.54  E-value=2.8e-14  Score=92.32  Aligned_cols=60  Identities=25%  Similarity=0.238  Sum_probs=53.4

Q ss_pred             CccEEEEeeccCCC-CCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKM-PDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~-~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+. +++++|+|++||+|.|+.+.+.+| |.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~~   68 (73)
T 2ebp_A            8 FCGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGT-WMGLL-NNKVGTFKFIYVDVLSS   68 (73)
T ss_dssp             CSEEEEECSCBCCCTTCCSBCCBCSSCEEEEEECCSSSC-EEEEC-SSCEEEECSTTEEECCC
T ss_pred             cceEEEEeeccCCCCCCCCccCCCCCCEEEEEEeCCCCe-EEEEE-CCCEEEEeHHHEEECCC
Confidence            34679999999972 388999999999999999999999 99988 89999999999998854

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.54  E-value=3.4e-14  Score=90.83  Aligned_cols=57  Identities=32%  Similarity=0.587  Sum_probs=52.5

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ ..++||+|++||+|.|+.+.  +++| |.++. +|+.|+||++||+.+..
T Consensus         3 ~~~~Alydy~a-~~~~eLs~~~Gd~i~vl~~~~~~~gW-w~g~~-~g~~G~~P~~yV~~~~~   61 (69)
T 2ydl_A            3 DYCKVIFPYEA-QNDDELTIKEGDIVTLINKDCIDVGW-WEGEL-NGRRGVFPDNFVKLLPP   61 (69)
T ss_dssp             EEEEESSCBCC-CSTTBCCBCTTCEEEEEESCCSSTTE-EEEEE-TTEEEEEEGGGEEECCS
T ss_pred             cEEEEcccCCC-CCCCccccCCCCEEEEEEcCCCCCCE-EEEEE-CCcEEEecHHHEEECCC
Confidence            57899999999 89999999999999999986  8899 99998 99999999999998764

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.54  E-value=3e-14  Score=89.85  Aligned_cols=57  Identities=28%  Similarity=0.653  Sum_probs=51.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.  +++| |.++. +|+.|+||++||+.+
T Consensus         5 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-~~g~~-~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            5 AKEYCRTLFPYTG-TNEDELTFREGEIIHLISKETGEAGW-WKGEL-NGKEGVFPDNFAVQI   63 (64)
T ss_dssp             SSEEEEESSCBCC-SSSSBCCBCTTCEEEEEESCSSSTTE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCEEEEECccCCc-cCCCccCCCCCCEEEEEECCCCCCCE-EEEEE-CCeEEEEeHHHEEEC
Confidence            3467999999999 89999999999999999885  7899 99987 999999999999875

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.54  E-value=2.6e-14  Score=88.30  Aligned_cols=56  Identities=32%  Similarity=0.666  Sum_probs=51.7

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++. +++.|+||++||+.+
T Consensus         3 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~l   58 (58)
T 2drm_A            3 GIQVKALYDYDA-QTGDELTFKEGDTIIVHQKDPAGW-WEGEL-NGKRGWVPANYVQDI   58 (58)
T ss_dssp             CEEEEESSCBCC-CSTTBCCBCTTCEEEEEECCTTSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCC-CCcCCcCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEEeHHHEEEC
Confidence            357899999999 899999999999999999988999 99998 999999999999864

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.53  E-value=1.3e-14  Score=107.18  Aligned_cols=57  Identities=19%  Similarity=0.389  Sum_probs=50.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCC-------cccCCHHHHHHHhhhCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGG-------RTFECLDAVINRYRKEQ   57 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~-------~~F~sl~eLi~~y~~~~   57 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++.| +.+.       ..|+||.|||+||+.++
T Consensus        57 ~FLVR~S~~~~g~y~LSv~~~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV~~Y~~~~  121 (152)
T 2hmh_A           57 TFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLVHHYMPPQ  121 (152)
T ss_dssp             EEEEEECCSTTCSEEEEEEETTEEEEEEEECGGGCBEECBCTTCSSCCCCBSSHHHHHHHTCCCC
T ss_pred             cEEEEeCCCCCCcEEEEEEcCCceEEEEEEecCCEEEEecccccccccCccCCHHHHHHHHhhCc
Confidence            599999999999999999999999999999855555 5554       89999999999999987

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.53  E-value=2.3e-14  Score=89.75  Aligned_cols=56  Identities=23%  Similarity=0.458  Sum_probs=51.2

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeec-cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      .++|+|+|.+ ..+++|+|++||+|.|+.+ .+++| |.++. +|+.|+||++||+.+..
T Consensus         3 ~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   59 (62)
T 2j6f_A            3 DYIVEYDYDA-VHDDELTIRVGEIIRNVKKLQEEGW-LEGEL-NGRRGMFPDNFVKEIKR   59 (62)
T ss_dssp             CEEECSCBCC-SSTTBCCBCTTCEEEEEEECSSTTE-EEEEE-TTEEEEEEGGGEEECC-
T ss_pred             EEEECccCCc-CCcCCcCCcCCCEEEEEEecCCCCE-EEEEE-CCcEEEechHHEEECCC
Confidence            5899999999 8999999999999999998 78899 99997 99999999999998753

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=4.6e-14  Score=90.06  Aligned_cols=59  Identities=19%  Similarity=0.478  Sum_probs=53.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 2dl4_A            6 SGNTYVALYKFVP-QENEDLEMRPGDIITLLEDSNEDW-WKGKI-QDRIGFFPANFVQRLSG   64 (68)
T ss_dssp             CCCEEEESSCCCC-SSTTBCCCCTTCEEEEEECCCSSE-EEEEC-SSCEEEEETTTEEECCC
T ss_pred             CCCEEEEeeeECC-CCcCCcCCCCCCEEEEEEeCCCCE-EEEEE-CCcEEEEehHHeEECCC
Confidence            3467999999999 889999999999999999989999 99996 89999999999998753

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.53  E-value=3.6e-14  Score=89.47  Aligned_cols=57  Identities=28%  Similarity=0.626  Sum_probs=52.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   62 (64)
T 2ak5_A            6 QLVVRAKFNFQQ-TNEDELSFSKGDVIHVTRVEEGGW-WEGTH-NGRTGWFPSNYVREIK   62 (64)
T ss_dssp             CCEEEESSCBCC-CSTTBCCBCTTCEEEEEECCTTSE-EEEEE-TTEEEEEEGGGEEECC
T ss_pred             CEEEEEccccCC-cCcCcccCCCCCEEEEeEecCCCE-EEEEE-CCCEEEEehHHeEEcC
Confidence            457999999999 889999999999999999989999 99998 9999999999999874

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.53  E-value=3.1e-14  Score=87.92  Aligned_cols=55  Identities=27%  Similarity=0.617  Sum_probs=51.5

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +++.|+||++||+++
T Consensus         3 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A            3 TYVQALFDFDP-QEDGELGFRRGDFIHVMDNSDPNW-WKGAC-HGQTGMFPRNYVTAV   57 (58)
T ss_dssp             CEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECceECC-CCcCCcCCCCCCEEEEEEcCCCCE-EEEEE-CCcEEEEchHHeEEC
Confidence            57899999999 889999999999999999988999 99998 999999999999875

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.53  E-value=5.5e-14  Score=92.45  Aligned_cols=60  Identities=12%  Similarity=0.373  Sum_probs=53.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC----CCeeEEEecCCCceeEEeCCcEEeccCC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG----DGWLWVTAHRTGEQGMIFRDLVEDLDET  194 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~----~~w~w~~~~~~~~~G~~P~~~v~~~~~~  194 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+    .+| |.++. +++.|+||++||++++..
T Consensus        12 ~~~~~~Alydy~~-~~~~eLs~~~Gd~i~vl~~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~~   75 (79)
T 1uhc_A           12 GNQVYFAVYTFKA-RNPNELSVSANQKLKILEFKDVTGNTEW-WLAEV-NGKKGYVPSNYIRKTESG   75 (79)
T ss_dssp             SSCCEEESSCBCC-CSSSBCCBCTTCEEEEEESCCTTSCTTE-EEEES-SSCEEEEEGGGEEECCSS
T ss_pred             CCeEEEECccCCC-CCCCccCCCCCCEEEEEECCCCCCCCCe-EEEEe-CCCEEEEchHHeEECCCC
Confidence            3467999999999 899999999999999999876    899 99986 999999999999988643

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=3.4e-14  Score=90.71  Aligned_cols=58  Identities=19%  Similarity=0.417  Sum_probs=53.3

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++. +++.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 2dmo_A            6 SGEAHRVLFGFVP-ETKEELQVMPGNIVFVLKKGNDNW-ATVMF-NGQKGLVPCNYLEPVS   63 (68)
T ss_dssp             CSEEEEECSSCCC-CSSSSCCCCTTCEEEECEECSSSC-EEEEE-TTEEEEECSTTEEECC
T ss_pred             CCCEEEECcCCCc-CCcCCCCCCCCCEEEEEEeCCCCE-EEEEe-CCCEEEeehHHeEECC
Confidence            3467999999999 889999999999999999989999 99977 8999999999999875

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.53  E-value=4.4e-14  Score=91.34  Aligned_cols=60  Identities=25%  Similarity=0.597  Sum_probs=54.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccCC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDET  194 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~~  194 (235)
                      ...++|+|+|.+ .++++|+|++||+|.|+++.++|| |.++.. +|+.|+||++||+.+...
T Consensus         5 ~~~~~Alydy~a-~~~~eLs~~~Gd~i~v~~~~~~gW-w~g~~~~~g~~G~~P~~yv~~~~~~   65 (73)
T 2lcs_A            5 NQRAVALYDFEP-ENDNELRLAEGDIVFISYKHGQGW-LVAENESGSKTGLVPEEFVSYIQPE   65 (73)
T ss_dssp             CEEEEESSCBCC-SSTTBCCBCTTCEEEEEEEETTTE-EEEECTTSSCEEEEESTTEEECCSS
T ss_pred             CCEEEECccCCC-CCCCccCCcCCCEEEEEEEcCCCE-EEEEECCCCCEEEeeHHHEEECCCC
Confidence            357899999999 889999999999999999999999 888875 489999999999998654

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=5.8e-14  Score=93.65  Aligned_cols=59  Identities=17%  Similarity=0.488  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+++.+.+| |.++..+|+.|+||++||++..
T Consensus        18 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~g~~G~~P~~yv~~~~   76 (85)
T 2yuq_A           18 EETVVIALYDYQT-NDPQELALRRNEEYCLLDSSEIHW-WRVQDRNGHEGYVPSSYLVEKS   76 (85)
T ss_dssp             SSCEEEESSCCCC-SCSSBCCCCBTEEEEEEECCSSSE-EEEECSSSCEEEEETTTCEECC
T ss_pred             CCeEEEECcCCCC-CCCCcCCCCCCCEEEEEEecCCCe-EEEEECCCCEEEEehHHeEEcc
Confidence            3467999999999 899999999999999999988999 9998668999999999999874

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.53  E-value=3.6e-14  Score=88.25  Aligned_cols=56  Identities=23%  Similarity=0.593  Sum_probs=51.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...  +++| |.++. +++.|+||++||+.+
T Consensus         3 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~l   60 (60)
T 1oot_A            3 SPKAVALYSFAG-EESGDLPFRKGDVITILKKSDSQNDW-WTGRV-NGREGIFPANYVELV   60 (60)
T ss_dssp             CCEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSCTTSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             ccEEEECccCCc-CCcCEeeEcCCCEEEEEEeCCCCCCe-EEEEE-CCEEEEEeHHHEEEC
Confidence            357899999999 88999999999999999986  7899 99998 999999999999864

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.52  E-value=3.1e-14  Score=90.57  Aligned_cols=57  Identities=25%  Similarity=0.244  Sum_probs=52.3

Q ss_pred             cEEEEeeccCCCC--CCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMP--DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~--~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ .  ++++|+|++||+|.|+...+.+| |.+.. +|+.|+||++||+.+..
T Consensus         2 ~~~~al~dy~~-~~~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~fP~~yv~~~~~   60 (67)
T 2bzy_A            2 VFAKAIQKRVP-CAYDKTALALEVGDIVKVTRMNINGQ-WEGEV-NGRKGLFPFTHVKIFDP   60 (67)
T ss_dssp             EEEEECSCBCS-EEECTTBCCBCTTCEEEEEEECSSSE-EEEEE-TTEEEEEEGGGEEECCS
T ss_pred             cEEEEeeeECC-CCCCCCccccCCCCEEEEEEecCCCe-EEEEe-CCcEEEEehHHeEECCC
Confidence            36899999999 7  88999999999999999999999 99987 89999999999998854

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=8.3e-14  Score=91.33  Aligned_cols=59  Identities=36%  Similarity=0.646  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++. +|+.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~-~~~~eLsf~~Gd~i~v~~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~   74 (78)
T 2ed0_A           16 YLEKVVAIYDYTK-DKEDELSFQEGAIIYVIKKNDDGW-YEGVM-NGVTGLFPGNYVESISG   74 (78)
T ss_dssp             CSEEEEECSCBCC-SSTTBCCBCSSCEEEEEEECSSSE-EEEEE-TTEEEEEETTSEEECSS
T ss_pred             cCEEEEECccCCc-cCcCcccccCCCEEEEEEeCCCCE-EEEEE-CCcEEEeChHHEEEcCC
Confidence            4567999999999 889999999999999999989999 99986 99999999999998753

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.52  E-value=2.5e-14  Score=90.98  Aligned_cols=57  Identities=21%  Similarity=0.215  Sum_probs=51.8

Q ss_pred             ccEEEEeeccCCCC--CCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMP--DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~--~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ .  ++++|+|++||+|.|+.+.+++| |.+.. +|+.|+||++||+.+.
T Consensus         6 ~~~~~alydy~~-~~~~~~eLs~~~Gd~i~v~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~   64 (67)
T 2eyx_A            6 PIYARVIQKRVP-NAYDKTALALEVGELVKVTKINVSGQ-WEGEC-NGKRGHFPFTHVRLLD   64 (67)
T ss_dssp             SCBEEECCCBCC-CTTCSSBCCBCSSEEEEEEEECTTSE-EEEEE-TTEEEEEEGGGBCCBC
T ss_pred             CEEEEEeEEECC-CCCCCCccccCCCCEEEEEEecCCCE-EEEEE-CCCEEEEehHhEEEcC
Confidence            357899999999 7  78899999999999999999999 99987 8999999999998764

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.52  E-value=4.8e-14  Score=92.01  Aligned_cols=60  Identities=25%  Similarity=0.518  Sum_probs=53.4

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCC--CceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRT--GEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~--~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++..+  ++.|+||++||+.+..
T Consensus         9 ~~~~~~alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~~~~~g~~G~~P~~yv~~~~~   70 (76)
T 2ed1_A            9 KVRRVKTIYDCQA-DNDDELTFIEGEVIIVTGEEDQEW-WIGHIEGQPERKGVFPVSFVHILSD   70 (76)
T ss_dssp             CCEEEEESSCCCC-SSSSBCCCCSSCEEEESSCCSSSE-EEEEETTCTTCEEEEEGGGEEECCC
T ss_pred             CCeEEEECccCCC-CCcCCcCcCCCCEEEEEEecCCCE-EEEEECCCCCCEEEEehHHeEECCC
Confidence            3468999999999 899999999999999999889999 9998732  4899999999999864

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.52  E-value=1.8e-14  Score=95.49  Aligned_cols=60  Identities=20%  Similarity=0.338  Sum_probs=52.6

Q ss_pred             CCccEEEEeecc-CCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCC-----CceeEEeCCcEEecc
Q psy13524        131 NDKKRIVAILPY-TKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRT-----GEQGMIFRDLVEDLD  192 (235)
Q Consensus       131 ~~~~~~~a~~~~-~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~-----~~~G~~P~~~v~~~~  192 (235)
                      .....++|+|+| .+ .++++|+|++||+|.|+.+.+++| |.++..+     |+.|+||++||+.+.
T Consensus        16 ~~~~~~~Alydy~~a-~~~~eLsf~~GDiI~V~~~~~~gW-w~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           16 RGSLKVRALKDFWNL-HDPTALNVRAGDVITVLEQHPDGR-WKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             -CCEEEEESSCBCCC-SCTTBCCBCTTCEEEESCSSCSSC-EEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             CCCeEEEEccccCCC-CCCCcccccCCCEEEEEEecCCCe-EEEEECCCCCCCCCEEEechHHEEECC
Confidence            355689999999 78 788999999999999999999999 9998753     699999999998764

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.52  E-value=5.6e-14  Score=89.69  Aligned_cols=58  Identities=24%  Similarity=0.513  Sum_probs=53.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ .++++|+|++||+|.|+...+.+| |.++. +++.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 2djq_A            6 SGPRAKALCNYRG-KNPGDLKFNKGDVILLRRQLDENW-YQGEI-NGVSGIFPASSVEVIS   63 (68)
T ss_dssp             SCCEEEECSCCCS-CCTTCCCCCTTCEEEEEECCCSSE-EEEEE-TTEEEEEESSSEETTC
T ss_pred             CceEEEECCCCCC-CCcCCccCCCCCEEEEEEecCCCE-EEEEE-CCcEEEeehHHEEEcC
Confidence            3468999999999 899999999999999999989999 99997 8999999999999774

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.52  E-value=1.4e-14  Score=108.13  Aligned_cols=70  Identities=17%  Similarity=0.303  Sum_probs=61.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCC-------cccCCHHHHHHHhhhCCc--ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGG-------RTFECLDAVINRYRKEQI--VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~-------~~F~sl~eLi~~y~~~~~--~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+.++.| +.+.       ..|+||.+||+||+.+++  ++.+.|..|++.
T Consensus        46 tFLVR~S~s~~g~y~LSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV~~Y~~~~~~~~~~~~l~ep~~~  125 (164)
T 2bbu_A           46 TFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYMPPPGTPSFSLPPTEPSSE  125 (164)
T ss_dssp             CCEEEECSTTSCCEEEEECCTTCCEEEECEEETTEEESSSCCCCCSSCTTCCHHHHHHHHHSCCCSCSCCSSSCSSCCSS
T ss_pred             CEEEEECCCCCCCEEEEEEECCceEEEEEEeCCCeEEEecCcccccCCCccCCHHHHHHHHhhCCCCCCccccccCCCcc
Confidence            699999999999999999999999999999877776 4443       799999999999999887  567888888874

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.52  E-value=1.8e-14  Score=90.24  Aligned_cols=57  Identities=26%  Similarity=0.578  Sum_probs=52.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ .++++|+|++||+|.|++..+++| |.++. +|+.|+||++||+.+
T Consensus         4 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~   60 (62)
T 1k4u_S            4 KGSQVEALFSYEA-TQPEDLEFQEGDIILVLSKVNEEW-LEGES-KGKVGIFPKVFVEDS   60 (62)
T ss_dssp             CCEEEECCSCBCC-CSSSBCCBCSSCEEEEEEESSSSC-EEEEC-SSCEEEECGGGCCCS
T ss_pred             CCeEEEECCCCCc-CCCCCccCCCCCEEEEEEeCCCCE-EEEEE-CCcEEEEeHHHEEEC
Confidence            3467999999999 889999999999999999989999 99996 899999999999865

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.52  E-value=5.6e-14  Score=90.47  Aligned_cols=60  Identities=22%  Similarity=0.509  Sum_probs=53.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeec--cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE--LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~--~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|+.+  .+++| |.++..+|+.|+||++||+.+..
T Consensus         5 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~~   66 (71)
T 1u5s_A            5 VLHVVQTLYPFSS-VTEEELNFEKGETMEVIEKPENDPEW-WKCKNARGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             SSSEEEESSCCCC-CSSSBCCCCSSCCEEEEECCCTTTCE-EEEEETTTEEEEEETTSEEECCC
T ss_pred             ccEEEEEcccCCC-CCCCcccCCCCCEEEEEECCCCCCCC-EEEEeCCCCEEEEeHHHEEECCC
Confidence            3467999999999 8899999999999999998  68899 99975589999999999998864

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.52  E-value=3.8e-14  Score=91.25  Aligned_cols=58  Identities=19%  Similarity=0.441  Sum_probs=51.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEee-ccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHN-ELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~-~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+. ..+++| |.++..+|+.|+||++||++.
T Consensus        10 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~   68 (71)
T 1csk_A           10 SGTECIAKYNFHG-TAEQDLPFCKGDVLTIVAVTKDPNW-YKAKNKVGREGIIPANYVQKR   68 (71)
T ss_dssp             -CEEEEESSCBCC-SSTTBCCBCTTCEEEEEEECSSTTE-EEEECTTSCEEEEETTSEEC-
T ss_pred             CCCEEEEceeECc-CCCCcCCCCCCCEEEEeECCCCCCC-EEEEeCCCCEEEEehHHeEEc
Confidence            3467999999999 889999999999999999 678999 999955999999999999865

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.52  E-value=2.8e-14  Score=90.59  Aligned_cols=57  Identities=19%  Similarity=0.434  Sum_probs=51.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+++ +++| |.++..+|+.|+||++||+.++
T Consensus         4 ~~~~~Alydy~a-~~~~ELsf~~Gd~i~vl~~-~~~W-w~~~~~~g~~G~~Psnyv~~~~   60 (67)
T 2b86_A            4 EVIVIAKWDYTA-QQDQELDIKKNERLWLLDD-SKTW-WRVRNAANRTGYVPSNYVERKL   60 (67)
T ss_dssp             CEEEEESSCBCC-SSTTSCCBCTTCEEEEEEC-SSSS-CEEECTTSCEEECCCCSEEEC-
T ss_pred             CeEEEEeeeECC-CCCCccccCCCCEEEEEec-CCCe-EEEEeCCCCEEEeChHHEeEcC
Confidence            357899999999 8999999999999999998 5799 9998668999999999999875

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.52  E-value=3.7e-14  Score=90.22  Aligned_cols=56  Identities=18%  Similarity=0.494  Sum_probs=52.0

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++..+|+.|+||++||+++
T Consensus         3 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A            3 EIVVAMYDFQA-TEAHDLRLERGQEYIILEKNDLHW-WRARDKYGSEGYIPSNYVTGK   58 (67)
T ss_dssp             SCEEECSCBCC-SSSSBCCBCTTCEEEEEECSSSSE-EEEECSSSCEEEEETTSEESS
T ss_pred             eEEEECccCCC-CCCCeecCCcCCEEEEEEccCCCc-EEEEECCCCEEEEEhHhEEEc
Confidence            46899999999 899999999999999999988999 999865899999999999986

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.51  E-value=4.2e-14  Score=91.32  Aligned_cols=58  Identities=24%  Similarity=0.374  Sum_probs=52.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+++.+.+| |.++. +|+.|+||++||+.+.
T Consensus        12 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~~   69 (72)
T 4glm_A           12 ALTYGVALYRFQA-LEPNELDFEVGDKIRILATLEDGW-LEGSL-KGRTGIFPYRFVKLCP   69 (72)
T ss_dssp             -CCEEEESSCBCC-CSTTBCCBCTTCEEEEEEECSTTE-EEEEE-TTEEEEEEGGGEEEEC
T ss_pred             CCeEEEECccCCC-CCCCcCCCCCCCEEEEEEccCCCE-EEEEE-CCcEEEEChHHeEECC
Confidence            4567999999999 899999999999999999989999 99996 8999999999999875

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.51  E-value=4.7e-14  Score=87.10  Aligned_cols=54  Identities=28%  Similarity=0.636  Sum_probs=50.5

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +++.|+||++||++
T Consensus         4 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~   57 (58)
T 1zlm_A            4 KVFRALYTFEP-RTPDELYFEEGDIIYITDMSDTNW-WKGTS-KGRTGLIPSNYVAE   57 (58)
T ss_dssp             EEEEESSCBCC-SSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEE
T ss_pred             EEEEECccCCC-CCCCCccCCCCCEEEEEEeCCCCE-EEEEE-CCCEEEEehHHEEe
Confidence            57899999999 889999999999999999988999 99998 99999999999975

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.51  E-value=5.6e-14  Score=86.76  Aligned_cols=54  Identities=24%  Similarity=0.448  Sum_probs=50.2

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      .++|+|+|.+ ..+++|+|++||+|.|+++.+.+| |.+.. +|+.|+||++||++.
T Consensus         3 ~a~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A            3 PAFVXFAYVA-EREDELSLVXGSRVTVMEXCSDGW-WRGSY-NGQIGWFPSNYVLEE   56 (58)
T ss_dssp             EEEECSCBCC-CSTTBCCBCTTCEEEEEEECTTSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEECccCCC-CCCCEeeEeCCCEEEEeEcCCCCE-EEEEE-CCcEEEEehHHEEEC
Confidence            6899999999 899999999999999999988999 98866 999999999999875

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.51  E-value=8.7e-14  Score=90.07  Aligned_cols=59  Identities=32%  Similarity=0.588  Sum_probs=53.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...  +.+| |.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~~~   68 (73)
T 2k9g_A            8 SKDYCKVIFPYEA-QNDDELTIKEGDIVTLINKDCIDVGW-WEGEL-NGRRGVFPDNFVKLLPP   68 (73)
T ss_dssp             SCEEEEECSCBCC-SSTTBCCBCTTCEEEEEECCSSSTTE-EEEEE-TTEEEEEEGGGEEECCS
T ss_pred             CccEEEECccCCC-CCCCeeeECCCCEEEEEECCCCCCCE-EEEEE-CCeEEEEchHHEEECCc
Confidence            4568999999999 89999999999999999985  8899 99997 99999999999998754

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.51  E-value=4.7e-14  Score=90.81  Aligned_cols=59  Identities=22%  Similarity=0.384  Sum_probs=52.9

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. .+|+.|+||++||+++..
T Consensus         6 ~~~~~al~~y~~-~~~~eLs~~~Gd~i~v~~~~~~gW-~~g~~~~~g~~G~fP~~yv~~~~~   65 (71)
T 2fpf_A            6 EQTHRAIFRFVP-RHEDELELEVDDPLLVELQAEDYW-YEAYNMRTGARGVFPAYYAIEVTK   65 (71)
T ss_dssp             CCCEEECSCBCC-SSTTBCCBCTTCEEEEEEECTTSE-EEEEETTTTEEEEEEGGGEEECC-
T ss_pred             CeEEEECeeECc-cCCCcccCcCCcEEEEeEecCCCE-EEEEECCCCCEEEeehHHEEECCC
Confidence            457899999999 889999999999999999989999 98884 589999999999998864

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=6.2e-14  Score=89.48  Aligned_cols=58  Identities=24%  Similarity=0.483  Sum_probs=53.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +++.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 1x2p_A            6 SGEEFVAIADYAA-TDETQLSFLRGEKILILRQTTADW-WWGER-AGCCGYIPANHVGKHS   63 (68)
T ss_dssp             SCCEEEESSCCCC-SSTTBCCCCTTCEEEEEECCSSSE-EEEEC-TTCCEEEESSSEECCC
T ss_pred             CCCEEEECceECC-CCcCCcCCCCCCEEEEEEcCCCCE-EEEEE-CCeEEEEehHHeEECC
Confidence            3467999999999 899999999999999999989999 99997 8999999999999874

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.51  E-value=2.7e-14  Score=90.97  Aligned_cols=56  Identities=20%  Similarity=0.497  Sum_probs=49.7

Q ss_pred             cEEEEeeccCCCCCCC-CcccCCCCEEEEeeccC-----CCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTD-ELTFQKGDIFFVHNELG-----DGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~-eL~~~~gd~i~v~~~~~-----~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ++++ ||+|++||+|.|+++.+     ++| |.++..+|+.|+||+|||+.+
T Consensus         8 ~~~~aly~y~a-~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gW-W~g~~~~G~~G~~PsnyV~~l   69 (69)
T 1nm7_A            8 HFARALYDFVP-ENPEMEVALKKGDLMAILSKKDPLGRDSDW-WKVRTKNGNIGYIPYNYIEII   69 (69)
T ss_dssp             -CEEECSCCCC-SSTTSCCCCCTTCEEEECCSSSSSCCSSSC-EEEEETTTEEEEECGGGEEEC
T ss_pred             eEEEEEecccC-CCCCCccCCCCCCEEEEEecCCCCCCCCCe-eEEEeCCCCEEEecHHHEEEC
Confidence            46899999999 7778 99999999999999875     499 999987899999999999863

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=8.4e-14  Score=88.85  Aligned_cols=57  Identities=26%  Similarity=0.590  Sum_probs=53.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +++.|+||++||+.+.
T Consensus         7 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 1x2k_A            7 GKVFRALYTFEP-RTPDELYFEEGDIIYITDMSDTNW-WKGTS-KGRTGLIPSNYVAEQS   63 (68)
T ss_dssp             SEEEEESSCCCC-CSTTBCCCCSSCEEEEEECSCSSE-EEEES-SSCEEEEETTTEEECC
T ss_pred             cEEEEECceECC-CCCCcccCCCCCEEEEEEcCCCCE-EEEEE-CCcEEEEehHHeEEcC
Confidence            467999999999 889999999999999999988999 99998 9999999999999874

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.51  E-value=3.5e-14  Score=88.34  Aligned_cols=54  Identities=22%  Similarity=0.543  Sum_probs=50.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEE
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~   59 (60)
T 2gnc_A            6 PEFAIAKFDYVG-RSARELSFKKGASLLLYHRASEDW-WEGRH-NGIDGLVPHQYIV   59 (60)
T ss_dssp             CEEEEESSCBCC-SSTTBCCBCTTCEEEEEEEEETTE-EEEEE-TTEEEEEEGGGEE
T ss_pred             CEEEEECCCCCc-CCcCCcCCCCCCEEEEEEecCCCE-EEEEE-CCeEEEEeHhhEE
Confidence            467999999999 899999999999999999988899 99998 8999999999996

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.51  E-value=4.9e-14  Score=87.35  Aligned_cols=56  Identities=27%  Similarity=0.649  Sum_probs=51.0

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCC-CceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRT-GEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~-~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++... ++.|+||++||+.+
T Consensus         2 ~~~~al~d~~~-~~~~eLs~~~Gd~i~v~~~~~~gW-~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A            2 QRAVALYDFEP-ENDNELRLAEGDIVFISYKHGQGW-LVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             EEEEECSCBCC-CSTTBCCBCTTCEEEEEEEEETTE-EEEECTTSSCEEEEEGGGEEEC
T ss_pred             CEEEECccCCC-CCCCCcCCCCCCEEEEEEcCCCCe-EEEEECCCCCEEEEehHHeEEC
Confidence            46899999999 889999999999999999989999 9888753 89999999999876

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.51  E-value=8.7e-14  Score=88.76  Aligned_cols=58  Identities=16%  Similarity=0.429  Sum_probs=52.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|++.. ++| |.++..+|+.|+||++||+++.
T Consensus         7 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~-~~W-w~~~~~~g~~G~~P~~yv~~~~   64 (68)
T 2k2m_A            7 ALKWVLCNYDFQA-RNSSELSVKQRDVLEVLDDS-RKW-WKVRDPAGQEGYVPYNILTPYP   64 (68)
T ss_dssp             CCCEEEESSCBCC-CSSSBCCBCTTCEEEEEECS-SSE-EEEECTTSCCEEEEGGGEEECC
T ss_pred             CCEEEEECccCCC-CCCCcccCCCCCEEEEEEcC-CCe-EEEEeCCCCEEEEEhhhEEEcC
Confidence            4568999999999 89999999999999999985 899 9998778999999999999874

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.51  E-value=1.9e-14  Score=94.27  Aligned_cols=59  Identities=24%  Similarity=0.470  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ .++++|+|.+||+|.|+...+++| |.++. +|+.|+||++||+.+..
T Consensus        17 ~~~~~~Alydy~a-~~~~eLsf~~Gd~I~Vl~~~~~gW-w~g~~-~g~~G~fP~nyV~~~~~   75 (79)
T 1z9q_A           17 AAPRAEALFDFTG-NSKLELNFKAGDVIFLLSRINKDW-LEGTV-RGATGIFPLSFVKILKD   75 (79)
T ss_dssp             SCCCEEESSCCCC-SSTTBCCCCTTCCBCCCEESSSSE-EEEEE-TTEEEEEEGGGEEESSC
T ss_pred             CceEEEEcCccCC-CCCCcccccCCCEEEEeEecCCCE-EEEEE-CCeEEEecHHHEEECCC
Confidence            3467899999999 899999999999999999999999 99997 89999999999998853

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.51  E-value=4.8e-14  Score=87.70  Aligned_cols=56  Identities=16%  Similarity=0.478  Sum_probs=51.5

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+.. +++| |.++..+|+.|+||++||+.+.
T Consensus         2 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~~~~~~g~~G~~P~~yv~~~~   57 (60)
T 1i07_A            2 KYAKSKYDFVA-RNSSELSVMKDDVLEILDD-RRQW-WKVRNASGDSGFVPNNILDIMR   57 (60)
T ss_dssp             CEEEESSCBCC-SSTTBCCBCTTCEEEECGG-GCCE-EEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEECccCCC-CCCCcccCCCCCEEEEEEc-CCCe-EEEEECCCCEEEEEHHHeEEcc
Confidence            46899999999 8999999999999999999 8999 9998668999999999999875

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.50  E-value=4.5e-14  Score=90.14  Aligned_cols=58  Identities=29%  Similarity=0.689  Sum_probs=53.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++..+|+.|+||++||++++
T Consensus        10 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           10 GEEYIAVGDFTA-QQVGDLTFKKGEILLVIEKKPDGW-WIAKDAKGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             CEEEEECSCBCC-SSSSCCCBCSSEEEEECSCCSSSE-EEEECSSSCEEEEESTTEEECC
T ss_pred             CCEEEEcccCCC-CCCCcCCCCCCCEEEEEEcCCCCe-EEEEECCCCEEEEehHHeEECc
Confidence            467899999999 889999999999999999988999 9998558999999999999874

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=5.3e-14  Score=90.59  Aligned_cols=61  Identities=25%  Similarity=0.491  Sum_probs=54.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccCCC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDETI  195 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~~~  195 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|+...+++| |.++. .++.|+||++||+++....
T Consensus         7 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~~~   67 (71)
T 2dnu_A            7 GEEKYVTVQPYTS-QSKDEIGFEKGVTVEVIRKNLEGW-WYIRY-LGKEGWAPASYLKKAKDSG   67 (71)
T ss_dssp             CSEEEECSSCBCC-SSTTBCCBCTTCEEEECCCCSSSE-EEEEE-TTEEEEEEGGGCEECCCCC
T ss_pred             CCCEEEECCccCC-CCCCCCcCCCCCEEEEeECCCCCe-EEEEE-CCcEEEEEHHHeEEccCCC
Confidence            3467999999999 899999999999999999988999 99998 5999999999999987543

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.50  E-value=4.1e-14  Score=107.61  Aligned_cols=70  Identities=19%  Similarity=0.245  Sum_probs=60.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcC-C----cccCCHHHHHHHhhhCCccc--ceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMG-G----RTFECLDAVINRYRKEQIVE--GHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~-~----~~F~sl~eLi~~y~~~~~~~--~~~L~~p~~~   70 (235)
                      +||||+|++.++.|+||++.++.|+||+|...+++|... .    ..|+||.|||+||+.++.+.  .+.|+.||.+
T Consensus        57 tFLVR~S~~~~~~lsLSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~F~SL~eLV~hY~~~~~~~~~~~~L~~Pv~r  133 (187)
T 2izv_A           57 TFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIR  133 (187)
T ss_dssp             EEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTCCGGGCCTTSCCCCEECCC
T ss_pred             cEEEEECCCCCceEEEEEeeCCeEEEEEEEECCCEEEEeccCCCccccCCHHHHHHHHHhccccccccccccccccc
Confidence            599999998777899999999999999999887776433 2    38999999999999988876  4789999987

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.50  E-value=1e-13  Score=88.43  Aligned_cols=59  Identities=25%  Similarity=0.517  Sum_probs=53.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 2dl3_A            6 SGRPARAKFDFKA-QTLKELPLQKGDIVYIYKQIDQNW-YEGEH-HGRVGIFPRTYIELLSG   64 (68)
T ss_dssp             CSEEEEESSCBCC-SSTTBCCBCTTCEEEEEECCSTTE-EEEEC-SSCEEEEETTTEEECCS
T ss_pred             CCcEEEECccCCC-CCcCCccCCCCCEEEEeEecCCCE-EEEEE-CCCEEEEchHHEEECCC
Confidence            3467999999999 889999999999999999988999 99996 89999999999998753

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.50  E-value=7.2e-14  Score=87.48  Aligned_cols=56  Identities=29%  Similarity=0.596  Sum_probs=52.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+++.+.+| |.++. +|+.|+||++||+++
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~-~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A            6 KELVLVLYDYQE-KSPRELTVKKGDILTLLNSTNKDW-WKIEV-NGRQGFVPAAYLKKL   61 (62)
T ss_dssp             CCEEEECSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CEEEEECcCCCC-CCCCCccCCCCCEEEEeEecCCCe-EEEEE-CCEEEEEEHHHEEEC
Confidence            357899999999 899999999999999999988999 99997 899999999999875

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=1.4e-13  Score=90.96  Aligned_cols=59  Identities=20%  Similarity=0.306  Sum_probs=54.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   67 (81)
T 2ysq_A            9 SIVSAEAVWDHVT-MANRELAFKAGDVIKVLDASNKDW-WWGQI-DDEEGWFPASFVRLWVN   67 (81)
T ss_dssp             CCEEEEESSCCCC-SSSSSCCCCTTCEEEEEECCSSSE-EEEEC-SSCEEEEEGGGEEESSC
T ss_pred             CceEEEEeeeECC-CCCCcCCCCCCCEEEEEEEcCcCE-EEEEE-CCCEEEechHHEEEcCC
Confidence            4567999999999 889999999999999999989999 99998 79999999999999864

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=7.6e-14  Score=90.07  Aligned_cols=59  Identities=25%  Similarity=0.526  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   66 (72)
T 2dl8_A            8 EPIEAIAKFDYVG-RTARELSFKKGASLLLYQRASDDW-WEGRH-NGIDGLIPHQYIVVQDT   66 (72)
T ss_dssp             SCEEEEESSCBCC-SSSSBCCBCTTCEEEEEEEEETTE-EEEEE-TTEEEEECSSSEEECCS
T ss_pred             CCEEEEECccCCc-CCCCEeccCCCCEEEEEeecCCCE-EEEEE-CCEEEEEchHHeEEcCC
Confidence            3467999999999 899999999999999999988999 99999 89999999999998764

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.50  E-value=5.4e-14  Score=90.04  Aligned_cols=58  Identities=29%  Similarity=0.530  Sum_probs=53.2

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|.+||+|.|+.+.+.+| |.++..+|+.|+||++||++..
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A            6 APTVVALYDYTA-NRSDELTIHRGDIIRVFFKDNEDW-WYGSIGKGQEGYFPANHVASET   63 (69)
T ss_dssp             CCEEEESSCBCC-CSTTBCCBCTTCEEEEEEECSSSE-EEEEEETTEEEEEEGGGEEEHH
T ss_pred             cCEEEECccCCC-CCcCcCCCCCCCEEEEEEecCCCe-EEEEeCCCCEEEEchHHeEECc
Confidence            467999999999 899999999999999999989999 9998778999999999999764

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=5.3e-14  Score=90.55  Aligned_cols=56  Identities=23%  Similarity=0.558  Sum_probs=51.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +++.|+||++||++
T Consensus        16 ~~~~~~Alydy~a-~~~~eLsf~~Gd~i~Vl~~~~~gW-w~g~~-~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           16 EARKVRAIYDFEA-AEDNELTFKAGEIITVLDDSDPNW-WKGET-HQGIGLFPSNFVTA   71 (72)
T ss_dssp             CCEEEEESSCBCC-SSTTBCCBCTTCEEEEEEEEETTE-EEEEC-SSCEEECTTCCEEE
T ss_pred             CCeEEEECCccCC-CCCCccCCCCCCEEEEEEecCCCE-EEEEE-CCCEEEechhhCcc
Confidence            4567999999999 899999999999999999988999 99998 78899999999975

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.50  E-value=9.2e-14  Score=89.96  Aligned_cols=58  Identities=31%  Similarity=0.564  Sum_probs=52.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|+.+.+.+| |.++.. +|+.|+||++||+++
T Consensus        14 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           14 GVTLFVALYDYEA-ITEDDLSFHKGEKFQILNSSEGDW-WEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             TTCEEEESSCBCC-SSTTBCCBCTTCEEEEEECSSSSE-EEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCEEEEECccCCC-CCCCcceEeCCCEEEEEEecCCCe-EEEEECCCCCEEEEEHHHeEEC
Confidence            3467999999999 899999999999999999989999 888874 889999999999876

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.50  E-value=1e-13  Score=86.78  Aligned_cols=56  Identities=23%  Similarity=0.554  Sum_probs=50.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|++.. ++| |.++. .+|+.|+||++||+++
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~-~~W-w~g~~~~~g~~G~~P~~yv~~~   62 (62)
T 2iim_A            6 DNLVIALHSYEP-SHDGDLGFEKGEQLRILEQS-GEW-WKAQSLTTGQEGFIPFNFVAKA   62 (62)
T ss_dssp             TCEEEESSCBCC-CSTTBCCBCTTCEEEEEECC-SSE-EEEEETTTCCEEEEEGGGEEEC
T ss_pred             CcEEEEcccCCC-CCCCCcCCCCCCEEEEEEcC-CCE-EEEEECCCCCEEEEEHHHEEEC
Confidence            467999999999 88999999999999999985 599 88885 4899999999999864

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.50  E-value=9.1e-14  Score=86.42  Aligned_cols=56  Identities=21%  Similarity=0.586  Sum_probs=50.6

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeec-cCCCeeEEEec-CCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAH-RTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~-~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|++. .+++| |.++. .+++.|+||++||+++
T Consensus         3 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~l   60 (60)
T 2v1q_A            3 ERGIVQYDFMA-ESQDELTIKSGDKVYILDDKKSKDW-WMCQLVDSGKSGLVPAQFIEPV   60 (60)
T ss_dssp             CEEEECSCBCC-CSTTBCCBCTTCEEEEEESSSCSSE-EEEEETTTCCEEEEEGGGEEEC
T ss_pred             cEEEEeeeECC-CCCCCccCCCCCEEEEEeCCCCCCC-EEEEECCCCCEEEEEHHHEEEC
Confidence            57899999999 8999999999999999998 48999 88887 4899999999999864

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.50  E-value=5.2e-14  Score=87.52  Aligned_cols=57  Identities=28%  Similarity=0.490  Sum_probs=49.3

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+.+ ++| |.++..+|+.|+||++||+++
T Consensus         3 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-~~g~~~~g~~G~~P~~yv~~l   60 (60)
T 2x3w_D            3 GVRVRALYDYDG-QEQDELSFKAGDELTKLGEEDEQGW-CRGRLDSGQLGLYPANYVEAI   60 (60)
T ss_dssp             -CEEEECSCBCC-SSSSBCCBCTTCEEEECSCCCSSSE-EEEECSSCCEEEEEGGGEEC-
T ss_pred             CCEEEECcccCc-cCCCcccCCCCCEEEEEEccCCCCc-eEEEeCCCCEEEecHHHEEEC
Confidence            357899999999 889999999999999998754 488 999985699999999999853

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.50  E-value=8.2e-14  Score=86.93  Aligned_cols=57  Identities=28%  Similarity=0.498  Sum_probs=51.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCcee-EEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQG-MIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G-~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +++.| +||++||+.+.
T Consensus         3 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A            3 KSAVKALFDYKA-QREDELTFTKSAIIQNVEKQDGGW-WRGDY-GGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CCCEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEEGGGEEECC
T ss_pred             CCEEEECcCCCc-CCCCCcCCcCCCEEEEEEecCCCE-EEEEE-CCeEEEEEChHHcEECC
Confidence            356899999999 899999999999999999989999 99988 67775 99999999864

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.50  E-value=6.4e-14  Score=89.41  Aligned_cols=57  Identities=21%  Similarity=0.411  Sum_probs=50.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CC---ceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TG---EQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~---~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++.. ++   +.|+||++||+.+
T Consensus         7 ~~~~~Alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A            7 PFKVVAQFPYKS-DYEDDLNFEKDQEIIVTSVEDAEW-YFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             SEEEEESSCBCC-SCTTBCCBCTTCEEEEEEECSSSE-EEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CEEEEECeeECc-CCcCCCCCCCCCEEEEEEecCCCe-EEEEECCCCCCCEEEEEchHHEEEC
Confidence            357999999999 899999999999999999989999 988863 34   8999999999865

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.1e-13  Score=91.14  Aligned_cols=59  Identities=17%  Similarity=0.285  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++. +++.|+||++||+++..
T Consensus         7 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~vl~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~   65 (80)
T 2ekh_A            7 GATSYMTCSAYQK-VQDSEISFPAGVEVQVLEKQESGW-WYVRF-GELEGWAPSHYLVLDEN   65 (80)
T ss_dssp             SCEEEEECSCBCC-SSTTSCCBCTTCEEEEEEECTTSE-EEEEE-TTEEEEEETTTEECCCC
T ss_pred             CCCEEEECCCCCC-CCCCccCcCCCCEEEEEEeCCCCe-EEEEE-CCCEEEEEhHHeEECCC
Confidence            3467999999999 899999999999999999999999 99997 79999999999998754

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1e-13  Score=90.20  Aligned_cols=58  Identities=22%  Similarity=0.462  Sum_probs=52.0

Q ss_pred             CccEEEEeeccCCCCC-------CCCcccCCCCEEEEee-ccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPD-------TDELTFQKGDIFFVHN-ELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~-------~~eL~~~~gd~i~v~~-~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..       +++|+|++||+|.|+. ..+.+| |.++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~Alydy~~-~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~   71 (75)
T 2ege_A            6 SGKIMIAALDYDP-GDGQMGGQGKGRLALRAGDVVMVYGPMDDQGF-YYGEL-GGHRGLVPAHLLDHMS   71 (75)
T ss_dssp             CSEEEEESSCBCT-TTTCCCSSSCCBCCBCTTCEEEEESCCCTTCE-EEEES-SSCEEEEETTTEEECC
T ss_pred             CCcEEEECCCCCC-CccccCCCCCCcceECCCCEEEEeEccCCCCE-EEEEE-CCcEEEEChHHeEEcc
Confidence            3467999999999 67       8999999999999997 478899 99998 9999999999999874

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.49  E-value=8.3e-14  Score=90.15  Aligned_cols=59  Identities=24%  Similarity=0.433  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +++.|+||++||+.+.+
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   64 (73)
T 2dbm_A            6 SGPCCRALYDFEP-ENEGELGFKEGDIITLTNQIDENW-YEGML-HGHSGFFPINYVEILVA   64 (73)
T ss_dssp             CCCEEEESSCBCC-CSTTCCCBCTTCEEECCBCSSSSE-EEEEE-TTEEEEEESSSEEESSC
T ss_pred             CCCEEEEccccCC-CCCCCccCCCCCEEEEEEecCCCE-EEEEE-CCCEEEechHHEEEccC
Confidence            3467999999999 889999999999999999988999 99998 99999999999998753

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.49  E-value=8.5e-14  Score=90.09  Aligned_cols=58  Identities=22%  Similarity=0.480  Sum_probs=53.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+++.+++| |.++. +|+.|+||++||+.+.
T Consensus        12 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~~   69 (73)
T 3c0c_A           12 DQPSCKALYDFEP-ENDGELGFREGDLITLTNQIDENW-YEGML-HGQSGFFPLSYVQVLV   69 (73)
T ss_dssp             CSCEEEESSCBCC-SSTTBCCBCTTCEEEEEEECSSSE-EEEEE-TTEEEEEEGGGEEEEE
T ss_pred             CCeEEEECccCCC-CCCCCccCcCCCEEEEEEecCCCE-EEEEE-CCCEEEeChHHEEECC
Confidence            3467999999999 899999999999999999989999 99998 8999999999999875

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.49  E-value=7.4e-14  Score=87.41  Aligned_cols=55  Identities=22%  Similarity=0.569  Sum_probs=50.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. .++.|+||++||++
T Consensus         5 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~   59 (62)
T 1uj0_A            5 ARRVRALYDFEA-VEDNELTFKHGELITVLDDSDANW-WQGEN-HRGTGLFPSNFVTT   59 (62)
T ss_dssp             CEEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEES
T ss_pred             CeEEEECccCCC-CCcCCcCCCCCCEEEEEEeCCCCE-EEEEE-CCCEEEechhHEEE
Confidence            457899999999 889999999999999999988999 99998 78899999999975

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.49  E-value=9e-14  Score=88.44  Aligned_cols=59  Identities=15%  Similarity=0.346  Sum_probs=52.6

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCC-CceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRT-GEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~-~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ .++++|+|++||+|.|+.+.+++| |.++..+ ++.|+||++||+.+..
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~~   65 (67)
T 2o9s_A            6 TGEAIAKFNFNG-DTQVEMSFRKGERITLLRQVDENW-YEGRIPGTSRQGIFPITYVDVIKR   65 (67)
T ss_dssp             SEEEEECSCBCC-SSTTBCCBCTTCEEEEEEECSSSE-EEEECTTSSCEEEEEGGGEEEEEC
T ss_pred             CEEEEECccCCc-CCcCccCCCCCCEEEEEEecCCCE-EEEEECCCCCEEEEChHHeEECCC
Confidence            357899999999 899999999999999999988999 9998853 6999999999998753

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.1e-13  Score=92.34  Aligned_cols=59  Identities=22%  Similarity=0.456  Sum_probs=53.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeec--cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE--LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~--~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+..  .+.+| |.++. +++.|+||++||+.+..
T Consensus         7 ~~~~~~al~dy~~-~~~~eLsf~~Gd~i~v~~~~~~~~~W-w~g~~-~g~~G~fP~~yv~~~~~   67 (85)
T 2dlp_A            7 GSGYVIALRSYIT-DNCSLLSFHRGDLIKLLPVATLEPGW-QFGSA-GGRSGLFPADIVQPAAA   67 (85)
T ss_dssp             CCCEEEESSCBCC-SSSSBCCBCTTCEEEECCCSCCCTTE-EEEES-SSCEEEEETTSEEECCC
T ss_pred             CCEEEEECCCCCc-cCcCCccCcCCCEEEEEEccCCCCCe-EEEEE-CCEEEEechHHeEECCC
Confidence            4467999999999 8899999999999999987  78999 99998 89999999999998853

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.49  E-value=7.6e-14  Score=93.61  Aligned_cols=57  Identities=25%  Similarity=0.498  Sum_probs=51.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-----CCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-----GDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-----~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|+++.     +++| |.++..+|+.|+||++||++
T Consensus        28 ~~~~~~Alydy~a-~~~~ELsf~~GD~I~Vl~~~~~~~~~~gW-w~g~~~~g~~G~fP~nyV~p   89 (89)
T 2rf0_A           28 AGPVWTAVFDYEA-AGDEELTLRRGDRVQVLSQDCAVSGDEGW-WTGQLPSGRVGVFPSNYVAP   89 (89)
T ss_dssp             CCCEEEECSCBCC-SSTTBCCBCTTCEEEEEECCHHHHSSTTE-EEEECTTCCEEEEEGGGEEC
T ss_pred             CCcEEEECCccCC-CCCCccccCCCCEEEEEeccCCcccCCCE-EEEEECCCCEEEEcHHHCcC
Confidence            4578999999999 88999999999999999985     8899 99998789999999999974

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.49  E-value=7.9e-14  Score=91.58  Aligned_cols=59  Identities=29%  Similarity=0.541  Sum_probs=52.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+++.+++| |.++. .+|+.|+||++||+++..
T Consensus         5 ~~~~~Alydy~~-~~~~eLs~~~Gd~i~vl~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~~   64 (79)
T 3cqt_A            5 STLFEALYDYEA-RTEDDLSFHKGEKFQILNSSEGDW-WEARSLTTGETGYIPSIYLAPVDR   64 (79)
T ss_dssp             CCCEEESSCBCC-CSTTBCCBCTTCEEEEEECTTSSE-EEEEETTTCCEEEEEGGGEEEC--
T ss_pred             CcEEEECccCCC-CCcCcCCCCCCCEEEEEEecCCCe-EEEEECCCCCEEEeehHHeEECCc
Confidence            357899999999 899999999999999999989999 88887 589999999999998753

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.49  E-value=8.2e-14  Score=89.16  Aligned_cols=56  Identities=32%  Similarity=0.534  Sum_probs=51.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeecc---CCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNEL---GDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~---~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ..++|+|+|.+ +.+++|+|++||+|.|+...   +.+| |.++. +|+.|+||++||+.+.
T Consensus         4 ~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   62 (69)
T 1wyx_A            4 VLAKALYDNVA-ESPDELSFRKGDIMTVLEQDTQGLDGW-WLCSL-HGRQGIVPGNRLKILV   62 (69)
T ss_dssp             EEEEESSCBCC-SSTTBCCBCTTCEEEEEETTGGGCTTE-EEEEE-TTEEEEEEGGGEEEEE
T ss_pred             EEEEECccCCc-CCCCccCCcCCCEEEEeECCCCCCCCc-EEEEE-CCcEEEechhhEEECC
Confidence            46899999999 89999999999999999987   7899 99987 9999999999999874

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.4e-13  Score=89.13  Aligned_cols=58  Identities=31%  Similarity=0.513  Sum_probs=52.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec---cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE---LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~---~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+   .+.+| |.++. +++.|+||++||+.+..
T Consensus         8 ~~~~~alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   68 (73)
T 2dl7_A            8 VCFVKALYDYEG-QTDDELSFPEGAIIRILNKENQDDDGF-WEGEF-NGRIGVFPSVLVEELSS   68 (73)
T ss_dssp             CEEEEESSCBCC-SSTTBCCBCTTCEEEEEECCCSSSSSC-EEEEE-TTEEEEECSSSEEECCS
T ss_pred             CEEEEECccCCc-CCCCcCCCCCCCEEEEEECCCCCCCCc-EEEEE-CCCEEEEChHHEEECCC
Confidence            467999999999 8899999999999999998   47899 99986 99999999999998864

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.49  E-value=1.5e-13  Score=90.13  Aligned_cols=59  Identities=34%  Similarity=0.555  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   64 (78)
T 2yuo_A            6 SGRRAKALLDFER-HDDDELGFRKNDIITIISQKDEHC-WVGEL-NGLRGWFPAKFVEVLDE   64 (78)
T ss_dssp             CCEEEEESSCBCC-SSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEEECC
T ss_pred             CceEEEECccCCC-CCCCCccCCCCCEEEEEEecCCCE-EEEEE-CCCEEEEehHHEEECCC
Confidence            3467999999999 889999999999999999989999 99987 89999999999998864

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.49  E-value=8.7e-14  Score=87.67  Aligned_cols=57  Identities=28%  Similarity=0.549  Sum_probs=51.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++.. +++.|+||++||+++
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A            6 LRTYRAMYDYSA-QDEDEVSFRDGDYIVNVQPIDDGW-MYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             --CEEESSCBCC-CSTTBCCBCTTCEEEEEEECSSSE-EEEEETTTTEEEEEEGGGEEEC
T ss_pred             CEEEEECeeeCC-cCCCcCCCCCCCEEEEEEeCCCCe-EEEEECCCCCEEEEeHHHeEEC
Confidence            356899999999 889999999999999999988999 888876 899999999999875

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.49  E-value=1.6e-13  Score=86.77  Aligned_cols=59  Identities=61%  Similarity=1.075  Sum_probs=51.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEe-cCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTA-HRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~-~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+...+++|+|++||+|.|+...+++| |.++ ..+|+.|+||++||+++.
T Consensus         5 ~~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~gW-~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A            5 RRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGW-MWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             TCEEEESSCBCCCTTSSBCCBCTTCEEEEEEECTTSE-EEEEETTTCCEEEEEGGGEEECC
T ss_pred             CcEEEEccccCCCCCCCcCcCCCCCEEEEeEecCCCE-EEEEECCCCCEEEEEhHHeEECc
Confidence            3579999999983477899999999999999989999 8887 348999999999999764

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.8e-13  Score=91.87  Aligned_cols=60  Identities=23%  Similarity=0.225  Sum_probs=53.1

Q ss_pred             CccEEEEeeccCCC-CCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKM-PDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~-~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+. .++++|+|++||+|.|+.+.+.+| |.+.. +|+.|+||++||+.+..
T Consensus        15 ~~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~fP~~yv~~~~~   75 (88)
T 2dbk_A           15 GPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQ-WEGEV-NGRKGLFPFTHVKIFDP   75 (88)
T ss_dssp             CCEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEECTTSC-EEEEC-SSCEEEECTTTEEECCS
T ss_pred             CCEEEEEcccccCCCCCCCcccCCCCCEEEEEEecCCCE-EEEEe-CCCEEEEehHHeEECCC
Confidence            34679999999951 388999999999999999999999 99987 89999999999999864

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=1.1e-13  Score=93.33  Aligned_cols=60  Identities=23%  Similarity=0.380  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++.. +++.|+||++||+.+..
T Consensus        16 ~~~~~~alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~~~~g~~G~fP~~yv~~~~~   76 (90)
T 2yup_A           16 EYGEAVAQYTFKG-DLEVELSFRKGEHICLIRKVNENW-YEGRITGTGRQGIFPASYVQVSRE   76 (90)
T ss_dssp             GSEEEEECSCCCC-CSSSBCCCCTTCEEEESSCCCSSE-EEEECTTTCCEEEEEGGGEEEEEC
T ss_pred             cceEEEEeecCCc-CCcCcCCCCCCCEEEEEEEcCCCe-EEEEECCCCCEEEEehHHeEEcCC
Confidence            4567999999999 899999999999999999989999 999873 49999999999998864

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.48  E-value=1.3e-13  Score=88.54  Aligned_cols=59  Identities=31%  Similarity=0.568  Sum_probs=53.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.  +.+| |.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~~~   66 (70)
T 2da9_A            6 SGDYCKVIFPYEA-QNDDELTIKEGDIVTLINKDCIDVGW-WEGEL-NGRRGVFPDNFVKLLSG   66 (70)
T ss_dssp             SSEEEEECSCCCC-SSTTBCCCCTTEEEEEEECCCSSTTE-EEEEC-SSCEEEEEGGGEEECCC
T ss_pred             CCcEEEECcCCCC-CCcCEeeEcCCCEEEEEECCCCCCCe-EEEEE-CCcEEEechHHeEECCC
Confidence            3467999999999 89999999999999999985  8899 99997 99999999999998753

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.48  E-value=7.1e-14  Score=88.37  Aligned_cols=56  Identities=27%  Similarity=0.571  Sum_probs=50.4

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC---C----CceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR---T----GEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~---~----~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++..   +    ++.|+||++||+++
T Consensus         2 ~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A            2 ELVLALYDYQE-KSPREVTMKKGDILTLLNSTNKDW-WKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             EEEEECSCBCC-SSTTBCCBCTTCEEEEEECCSSSE-EEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             cEEEEcccCCc-cCCCCCCCCCCCEEEEEEcCCCCE-EEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            46899999999 899999999999999999989999 988873   1    88999999999875

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.48  E-value=8.8e-14  Score=87.92  Aligned_cols=57  Identities=26%  Similarity=0.658  Sum_probs=52.2

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ .++++|+|.+||+|.|+++.+.+| |.++. +|+.|+||++||+.+.
T Consensus         7 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A            7 KRQCKVLFEYIP-QNEDELELKVGDIIDINEEVEEGW-WSGTL-NNKLGLFPSNFVKELE   63 (65)
T ss_dssp             -CEEEECSCBCC-SSTTBCCBCTTCEEEEEEEEETTE-EEEEE-TTEEEEEEGGGEEECC
T ss_pred             CeEEEEeeeeCC-CCcCCcCCCCCCEEEEEEecCCCE-EEEEE-CCCEEEeehHHEEECc
Confidence            467999999999 889999999999999999988999 99996 9999999999999874

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.3e-13  Score=89.93  Aligned_cols=58  Identities=28%  Similarity=0.573  Sum_probs=53.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +++.|+||++||+.+..
T Consensus        10 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   67 (76)
T 2epd_A           10 VVEAVACFAYTG-RTAQELSFRRGDVLRLHERASSDW-WRGEH-NGMRGLIPHKYITLPAG   67 (76)
T ss_dssp             CEEEEESSCEEC-SSTTBCEECTTCEEEEEEEEETTE-EEEEE-TTEEEEEESSSEECCSS
T ss_pred             CEEEEECcCCCC-CCCCccCCCCCCEEEEEEeCCCCE-EEEEE-CCcEEEEehHHEEEcCC
Confidence            467999999999 899999999999999999988999 99998 99999999999998754

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.48  E-value=6.3e-14  Score=89.70  Aligned_cols=60  Identities=27%  Similarity=0.468  Sum_probs=52.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++..++..|+||++||+.+..
T Consensus         6 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~~~G~~P~~yv~~~~~   65 (69)
T 2eqi_A            6 SGRTVKALYDYKA-KRSDELTFCRGALIHNVSKEPGGW-WKGDYGTRIQQYFPSNYVEDISG   65 (69)
T ss_dssp             CCCEEEESSCBCC-CSSSCCCBCTTCEEESCCCCSSSC-EEEEETTEEEEEECGGGEEECCS
T ss_pred             CCcEEEECeeECC-CCcCccCCCCCCEEEEEEcCCCCe-EEEEECCCCEEEEchHHcEECcc
Confidence            3467999999999 889999999999999999989999 99998555559999999998753

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=1.2e-13  Score=89.39  Aligned_cols=59  Identities=24%  Similarity=0.473  Sum_probs=52.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.  +.+| |.++. +++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   66 (73)
T 2dm1_A            6 SGGTAVARYNFAA-RDMRELSLREGDVVRIYSRIGGDQGW-WKGET-NGRIGWFPSTYVEEEGI   66 (73)
T ss_dssp             SSSEEEESSCBCC-CSTTBCCBCTTCEEECCBSSSSSSSC-EEEEE-TTEEEEECSSSEEECCC
T ss_pred             CCCEEEECccCCc-CCCCcCCCCCCCEEEEEEecCCCCCe-EEEEE-CCeEEEeehHHEEEcCC
Confidence            4567999999999 89999999999999999987  4589 99997 99999999999998753

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.48  E-value=1.3e-13  Score=89.20  Aligned_cols=58  Identities=29%  Similarity=0.584  Sum_probs=53.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|.+||+|.|+.+.+.+| |.++. +++.|+||++||+.+..
T Consensus         5 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   62 (73)
T 3thk_A            5 KELVLALYDYQE-KSPREVTMKKGDILTLLNSTNKDW-WKVEV-NDRQGFVPAAYVKKLDP   62 (73)
T ss_dssp             CCEEEECSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEECCC
T ss_pred             CEEEEECcCCCc-CCCCccCCCCCCEEEEEECCCCCe-EEEEE-CCcEEEEehHHeEECCC
Confidence            467899999999 899999999999999999989999 99987 89999999999998864

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.48  E-value=5e-14  Score=90.14  Aligned_cols=58  Identities=22%  Similarity=0.567  Sum_probs=52.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+ +.+| |.++. +++.|+||++||+.+..
T Consensus         7 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~g~~-~g~~G~~P~~yv~~~~~   64 (69)
T 1uhf_A            7 GGEEYIALYPYSS-VEPGDLTFTEGEEILVTQK-DGEW-WTGSI-GDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             CSEEEECSSCBCC-SSSSBCCBCTTCEEEECEE-ETTE-EEECS-TTCCEEECGGGCEECCC
T ss_pred             CCCEEEEeeeECC-CCcCccCCCCCCEEEEEEe-CCCE-EEEEe-CCcEEEEchHHeEECCC
Confidence            4567999999999 8899999999999999998 7899 99987 89999999999998753

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.48  E-value=5.2e-14  Score=89.85  Aligned_cols=58  Identities=29%  Similarity=0.633  Sum_probs=53.2

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+.+..
T Consensus         7 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 1wi7_A            7 GRRCQVAFSYLP-QNDDELELKVGDIIEVVGEVEEGW-WEGVL-NGKTGMFPSNFIKELSG   64 (68)
T ss_dssp             CCCEEESSCBCC-SSTTBCCBCTTCEECCCEEEETTE-EEECS-TTCCEEEETTSEEECCS
T ss_pred             CCEEEECccCCc-CCCCCccCcCCCEEEEEEcCCCCe-EEEEE-CCcEEEEchHHEEECCC
Confidence            457899999999 899999999999999999988999 99997 99999999999998854

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=1.7e-13  Score=91.96  Aligned_cols=59  Identities=20%  Similarity=0.481  Sum_probs=53.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. .++.|+||++||+.+..
T Consensus        16 ~~~~~~Alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   74 (88)
T 1x2q_A           16 VARKVRALYDFEA-VEDNELTFKHGEIIIVLDDSDANW-WKGEN-HRGIGLFPSNFVTTNLN   74 (88)
T ss_dssp             CCEEEEESSCCCC-CSSSCCCCCSSCEEEEEECSCSSS-EEEEE-TTEEEEECGGGEESCSS
T ss_pred             CCeEEEEcccCCC-CCcCccCCCCCCEEEEEEeCCCCE-EEEEE-CCcEEEEehHHEEEcCC
Confidence            4568999999999 889999999999999999989999 99998 78899999999998753

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.48  E-value=1.7e-13  Score=90.51  Aligned_cols=59  Identities=14%  Similarity=0.373  Sum_probs=53.3

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeec--cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE--LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~--~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|+..  .+.+| |.++. +++.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   76 (81)
T 1x43_A           16 NNRKARVLYDYDA-ANSTELSLLADEVITVFSVVGMDSDW-LMGER-GNQKGKVPITYLELLNS   76 (81)
T ss_dssp             CCEEEEESSCCCC-SSTTBCCCCTTCEEEEECCTTCCTTE-EEEEE-TTEEEEEEGGGEEECCC
T ss_pred             CCeEEEEcccCCC-CCCCcCCCCCCCEEEEEEcCCCCCCc-EEEEE-CCCEEEEehHHEEECCC
Confidence            4578999999999 8999999999999999998  46899 99986 99999999999998864

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=1.3e-13  Score=88.82  Aligned_cols=59  Identities=25%  Similarity=0.461  Sum_probs=53.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc---CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL---GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~---~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...   +.+| |.++. +++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   67 (71)
T 2cre_A            6 SGLLARALYDNCP-DCSDELAFSRGDILTILEQHVPESEGW-WKCLL-HGRQGLAPANRLQILSG   67 (71)
T ss_dssp             CCEEEEESSCCCC-SSSSBCCCCSSCCEEEEESCCTTSTTE-EEEES-SSCCEEEETTTEEECCC
T ss_pred             CcEEEEECcccCc-CCCCCCCCCCCCEEEEeEcCCCCCCCc-EEEEE-CCCEEEEehHHEEECCC
Confidence            3467999999999 89999999999999999987   8999 99996 89999999999998753

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.47  E-value=2.5e-14  Score=91.04  Aligned_cols=59  Identities=27%  Similarity=0.652  Sum_probs=53.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++..+|+.|+||++||+++.
T Consensus         7 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~   65 (67)
T 1aww_A            7 ELKKVVALYDYMP-MNANDLQLRKGDEYFILEESNLPW-WRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCCEEEBSSCCCC-SSSSSCCCCSSCEEECCCCCSSSE-ECCBCTTSCBCCEETTTBCCSC
T ss_pred             CCeEEEECccCCC-CCCCCccCCCCCEEEEEEccCCCc-EEEEECCCCEEEEchHhEEEcC
Confidence            3467999999999 899999999999999999988999 9998558999999999998754

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.5e-13  Score=88.25  Aligned_cols=60  Identities=27%  Similarity=0.438  Sum_probs=53.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++.. +++.|+||++||+++..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~gW-~~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ct3_A            6 SGTPYRAMYQYRP-QNEDELELREGDRVDVMQQCDDGW-FVGVSRRTQKFGTFPGNYVAPVSG   66 (70)
T ss_dssp             CCEEEEESSCBCC-SSTTBCCBCTTEEEEEEEECSSSC-EEEEESSSCCEEEECTTTEEETTC
T ss_pred             CCcEEEECccCCc-CCcCCccCCCCCEEEEEEECCCCE-EEEEECCCCCEEEechHHeEECCC
Confidence            4567999999999 899999999999999999989999 888875 68999999999998753

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.47  E-value=1.1e-13  Score=89.23  Aligned_cols=58  Identities=24%  Similarity=0.395  Sum_probs=52.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec-cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.. .+.+| |.++. +|+.|+||++||+.+..
T Consensus        10 ~~~~~alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   68 (72)
T 1ugv_A           10 FRKAKALYACKA-EHDSELSFTAGTVFDNVHPSQEPGW-LEGTL-NGKTGLIPENYVEFLSG   68 (72)
T ss_dssp             CCCEEESSCBCC-CSSSBCCBCTTCEEBSCCBCSSTTE-EEEES-SSCEEEEEGGGEEECCS
T ss_pred             ccEEEEccccCC-cCCCEeCCcCCCEEEEEEecCCCCe-EEEEE-CCcEEEecHHHEEECCC
Confidence            467999999999 8899999999999999884 67889 99986 99999999999998854

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.47  E-value=1.8e-13  Score=87.58  Aligned_cols=58  Identities=19%  Similarity=0.421  Sum_probs=52.0

Q ss_pred             cEEEEeeccC-CCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYT-KMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~-~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|. + ..+++|+|++||+|.|+...+++| |.++.. +|+.|+||++||+++..
T Consensus         3 ~~~~alydy~~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~~~~g~~G~~P~~yv~~~~~   62 (69)
T 1ruw_A            3 PKFEAAYDFPGS-GSSSELPLKKGDIVFISRDEPSGW-SLAKLLDGSKEGWVPTAYMTPYKD   62 (69)
T ss_dssp             SEEEESSCBCCC-SCTTBCCBCTTCEEEEEEECTTSE-EEEEETTSSCEEEEEGGGEEECCS
T ss_pred             cEEEEccccCCC-CCCCcccCCCCCEEEEEEecCCCe-EEEEECCCCCEEEEehHHeEEcCC
Confidence            5789999995 8 789999999999999999989999 888875 39999999999998754

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=9.1e-14  Score=91.62  Aligned_cols=58  Identities=21%  Similarity=0.409  Sum_probs=52.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC--CCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG--DGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~--~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+  .+| |.++. +++.|+||++||+.+.
T Consensus        16 ~~~~~~al~dy~~-~~~~eLsf~~Gd~i~v~~~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   75 (80)
T 2d8h_A           16 QPIEVTALYSFEG-QQPGDLNFQAGDRITVISKTDSHFDW-WEGKL-RGQTGIFPANYVTMNS   75 (80)
T ss_dssp             SCEEEECSSCEEC-SSTTBCEECTTCEEEEEECCSCSSSE-EEEEE-TTEEEEEEGGGCCBCC
T ss_pred             CCEEEEECccCCc-CCCCeeeEcCCCEEEEeECcCCCCCe-EEEEE-CCEEEEEchhHeEEcC
Confidence            4567999999999 899999999999999999875  899 99998 8999999999998764

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.47  E-value=7.4e-14  Score=84.91  Aligned_cols=52  Identities=25%  Similarity=0.427  Sum_probs=48.0

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEE
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      .++|+|+|.+ ..+++|+|++||+|.|+...+ ++| |.++. +++.|+||++||+
T Consensus         2 ~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-~~g~~-~g~~G~~P~~yv~   54 (54)
T 2a28_A            2 AMEAIYAYEA-QGDDEISIDPGDIITVIRGDDGSGW-TYGEC-DGLKGLFPTSYCK   54 (54)
T ss_dssp             EEEBCSCBCC-CSTTBCCBCTTCEEEEEECCCSSSE-EEEEE-TTEEEEEEGGGBC
T ss_pred             EEEECccCCc-CCCCCccCCCCCEEEEEEecCCCCE-EEEEE-CCeEEEeeHHHcC
Confidence            5789999999 899999999999999999985 799 99999 9999999999984

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.47  E-value=1.9e-13  Score=87.14  Aligned_cols=57  Identities=21%  Similarity=0.515  Sum_probs=52.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+ +++| |.++..+++.|+||++||+.+.
T Consensus         7 ~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxt_A            7 GLKMQVLYEFEA-RNPRELTVVQGEKLEVLDH-SKRW-WLVKNEAGRSGYIPSNILEPLS   63 (68)
T ss_dssp             CEEEEESSCBCC-CSSSBCCBCTTCEEEEEEC-SSSE-EEEECTTSCEEEEEGGGEECCC
T ss_pred             CeEEEECceECC-CCcCcCCCCCCCEEEEEEc-CCCE-EEEEECCCCEEEEEhHHcEECC
Confidence            467999999999 8999999999999999998 5899 9999669999999999999875

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.4e-13  Score=90.21  Aligned_cols=60  Identities=15%  Similarity=0.294  Sum_probs=53.4

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+++.+ .+| |.++..+|+.|+||++||+.+..
T Consensus        12 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~~   72 (78)
T 2dl5_A           12 YPLTCKVVYSYKA-SQPDELTIEEHEVLEVIEDGDMEDW-VKARNKVGQVGYVPEKYLQFPTS   72 (78)
T ss_dssp             SSEEEEECSCBCC-CSTTBCCBCSSEEEEEEECCSSSSE-EEEECTTCCEEEEETTTSCCSCC
T ss_pred             CCcEEEEceeECC-CCCCCCCCCCCCEEEEEeccCCCCc-EEEEeCCCCEEEEEhHHEEECCC
Confidence            4467999999999 889999999999999999975 899 99998669999999999987753

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.47  E-value=2.3e-13  Score=87.55  Aligned_cols=59  Identities=24%  Similarity=0.599  Sum_probs=53.3

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEec-CCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAH-RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~-~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+... +++| |.++. .+|+.|+||++||+.+..
T Consensus         6 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~~   66 (71)
T 2jt4_A            6 KKRGIVQYDFMA-ESQDELTIKSGDKVYILDDKKSKDW-WMCQLVDSGKSGLVPAQFIEPVRD   66 (71)
T ss_dssp             CEEEEECSCBCC-SSTTBCCBCTTCEEEEEESSSCSSE-EEEEETTTCCEEEEEGGGEEETTT
T ss_pred             CCEEEEcccCCC-CCCCcccCCCCCEEEEEECCCCCCC-EEEEECCCCCeEEechHHeEECCC
Confidence            468999999999 89999999999999999987 8999 88887 489999999999998754

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=4.2e-13  Score=88.54  Aligned_cols=59  Identities=20%  Similarity=0.503  Sum_probs=52.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCC-CeeEEEec-CCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGD-GWLWVTAH-RTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~-~w~w~~~~-~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...++ +| |.++. .+|+.|+||++||++..
T Consensus        16 ~~~~~~Alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           16 PGTQCITKCEHTR-PKPGELAFRKGDVVTILEACENKSW-YRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             TTCEEEESSCBSS-CCTTCCCBCTTCEEEEEECCCSSSE-EEEEETTTCCEEEEEGGGEEECC
T ss_pred             CCCEEEECCCCCc-CCCCCCCCCCCCEEEEEeccCCCCe-EEEEeCCCCCEEEEehHHEEEcc
Confidence            4467999999999 8999999999999999998766 89 99986 38999999999998753

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.47  E-value=1.4e-13  Score=87.48  Aligned_cols=57  Identities=25%  Similarity=0.390  Sum_probs=48.9

Q ss_pred             ccEEEEeeccCCCCCCCC-cccCCCCEEEEeec-cCCCeeEEEecC-CCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDE-LTFQKGDIFFVHNE-LGDGWLWVTAHR-TGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~e-L~~~~gd~i~v~~~-~~~~w~w~~~~~-~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ .++++ |+|++||+|.|+.. .+++| |.++.. +|+.|+||++||+++
T Consensus         7 ~~~~~al~dy~~-~~~~e~Lsf~~Gd~i~v~~~~~~~gW-~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A            7 RMRVKAIFSHAA-GDNSTLLSFKEGDLITLLVPEARDGW-HYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             CCEEEESSCBCC-CSCTTBCCBCTTCEEEECSSSCBTTE-EEEEETTTCCEEEEEGGGEEEC
T ss_pred             CeEEEEccccCC-CCCCCCccCCCCCEEEEeeccCCCCC-EEEEECCCCCEEEEEHHHeEEC
Confidence            457999999999 66565 99999999999964 57899 888843 899999999999876

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.46  E-value=1.7e-13  Score=84.56  Aligned_cols=54  Identities=19%  Similarity=0.384  Sum_probs=49.1

Q ss_pred             EEEEeecc-CCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEe
Q psy13524        135 RIVAILPY-TKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVED  190 (235)
Q Consensus       135 ~~~a~~~~-~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~  190 (235)
                      .++|+|+| .+ ..+++|+|++||+|.|+...+++| |.++.. +|+.|+||++||++
T Consensus         2 ~~~al~d~~~~-~~~~eLs~~~Gd~i~v~~~~~~gW-~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A            2 MFEAAYDFPGS-GSPSELPLKKGDVIYITREEPSGW-SLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             EEEESSCBCCC-SCTTBCCBCTTCEEEEEEECTTSE-EEEEESSCSCEEEEEGGGEEC
T ss_pred             EEEEecccCCC-CCCCcCCCCCCCEEEEEEecCCCe-EEEEECCCCCEEEecHHHEEE
Confidence            58999999 78 789999999999999999999999 888875 39999999999975

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.46  E-value=1.5e-13  Score=87.90  Aligned_cols=58  Identities=33%  Similarity=0.618  Sum_probs=53.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +++.|+||++||+.+.
T Consensus         7 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~   64 (69)
T 2dil_A            7 GAQEYRALYDYTA-QNPDELDLSAGDILEVILEGEDGW-WTVER-NGQRGFVPGSYLEKLS   64 (69)
T ss_dssp             CCCEEECCSCBCC-SSSSSCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGCCBCC
T ss_pred             CCcEEEECccCCc-cCcCccCCCCCCEEEEEECCCCCE-EEEEE-CCCEEEEehHHeEEcC
Confidence            3467999999999 889999999999999999988999 99998 7999999999998774

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.46  E-value=2.5e-13  Score=85.30  Aligned_cols=57  Identities=16%  Similarity=0.296  Sum_probs=50.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+. +.+| |.++. +|+.|+||++||++++
T Consensus         5 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-~~~~~-~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A            5 PNLFVALYDFVA-SGDNTLSITKGEKLRVLGYNHNGEW-CEAQT-KNGQGWVPSAYITPVN   62 (63)
T ss_dssp             TTEEEESSCBCC-CSSSBCCBCTTCEEEEEEECTTSSE-EEEEE-TTEEEEEEGGGEEESC
T ss_pred             CEEEEEcceECC-CCCCccCCCCCCEEEEEEeCCCCCe-EEEEE-CCCeEEEehHHeEECC
Confidence            467999999999 89999999999999999955 4557 99998 8999999999999864

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.46  E-value=1.9e-13  Score=86.89  Aligned_cols=59  Identities=24%  Similarity=0.432  Sum_probs=51.2

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec-cCCCeeEEEecC-CCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHR-TGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~~-~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+...+++|+|++||+|.|+.+ .+++| |.++.. +++.|+||++||+.+.
T Consensus         6 ~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A            6 KQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGW-LYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CCEEEESSCBCCSSCSSBCCBCTTCEEEESSSSCBTTE-EEEEESSSCCEEEEEGGGEEESC
T ss_pred             CEEEEEeecCCCCCCCCCCcCCCCCEEEEeECCCCCCc-EEEEECCCCCEEEEehHHeEECC
Confidence            46799999999426889999999999999986 78999 888874 4999999999999874

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=2.5e-13  Score=89.25  Aligned_cols=59  Identities=29%  Similarity=0.635  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   64 (79)
T 2yun_A            6 SGRLCKALYSFQA-RQDDELNLEKGDIVIIHEKKEEGW-WFGSL-NGKKGHFPAAYVEELPS   64 (79)
T ss_dssp             CSEEEEESSCBCC-SSTTBCCBCTTCEEEEEECCSSSC-EEEES-SSCEEEECSTTEEEESS
T ss_pred             CCCEEEECccCCc-CCCCCcCCCCCCEEEEEEcCCCCE-EEEEE-CCCEEEEEhHHeEECCC
Confidence            3468999999999 899999999999999999988999 99996 89999999999998864

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=1.2e-13  Score=88.69  Aligned_cols=58  Identities=26%  Similarity=0.533  Sum_probs=53.2

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +++.|+||++||+++..
T Consensus         8 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   65 (70)
T 2ega_A            8 LEQYVVVSNYKK-QENSELSLQAGEVVDVIEKNESGW-WFVST-SEEQGWVPATYLEAQNS   65 (70)
T ss_dssp             CBCEECCSCCCC-CSSSSCCCCTTCBCEEEEECTTSE-EEEEC-SSCEEEEEGGGCEESCC
T ss_pred             CcEEEECceECC-CCCCcccCCCCCEEEEEEccCCCe-EEEEE-CCCEEEEehHHcEECCC
Confidence            456899999999 899999999999999999989999 99987 78999999999998753

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.45  E-value=1.9e-13  Score=88.22  Aligned_cols=57  Identities=19%  Similarity=0.494  Sum_probs=51.7

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.. +++| |.++..+|+.|+||++||+.+.
T Consensus         7 ~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~g~~~~g~~G~~P~~yv~~~~   63 (72)
T 2jw4_A            7 EVVVVAKFDYVA-QQEQELDIKKNERLWLLDD-SKSW-WRVRNSMNKTGFVPSNYVERKN   63 (72)
T ss_dssp             CEEEECSSCCCC-SSTTSCCCCTTCEEEEEEC-SSSS-EEEECTTSCEEEECTTSCEECC
T ss_pred             CeEEEECcCCCc-CCCCcccCCCCCEEEEEEC-CCCE-EEEEECCCCEEEEEhhHEEEcC
Confidence            467999999999 8899999999999999997 6799 9998668999999999999875

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=2.2e-13  Score=89.48  Aligned_cols=59  Identities=27%  Similarity=0.472  Sum_probs=53.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +++.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   74 (79)
T 1x69_A           16 LGITAVALYDYQA-AGDDEISFDPDDIITNIEMIDDGW-WRGVC-KGRYGLFPANYVELRQS   74 (79)
T ss_dssp             CCCCEEESSCCCC-SSSSBCCCCTTCEEEEEEECSSSE-EEEEE-TTEEEEEETTSEEECCC
T ss_pred             CCeEEEECccCCC-CCCCCcCcCCCCEEEEeEecCCCe-EEEEE-CCcEEEechHHEEECCC
Confidence            3457999999999 889999999999999999989999 99997 89999999999998753

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=5.5e-13  Score=90.61  Aligned_cols=60  Identities=28%  Similarity=0.582  Sum_probs=53.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--C--CCeeEEEec-CCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--G--DGWLWVTAH-RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~--~~w~w~~~~-~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|+.+.  +  ++| |.++. .+|+.|+||++||+++.+
T Consensus        15 ~~~~~~Alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~~gW-w~g~~~~~g~~G~fP~~yv~~~~~   79 (94)
T 2e5k_A           15 NHETLQVIYPYTP-QNDDELELVPGDFIFMSPMEQTSTSEGW-IYGTSLTTGCSGLLPENYITKADE   79 (94)
T ss_dssp             CCEEEEECSCBCC-SSSSBCCBCTTCEEEECGGGCCSTTTTE-EEEEESSSCCEEEEEGGGEEECCS
T ss_pred             CCeEEEECCcCCC-CCCCCcCCCCCCEEEEEECcCCCCCCCc-EEEEECCCCCEEEechHHeEEccc
Confidence            4578999999999 89999999999999999883  4  899 99984 499999999999999864

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=3.6e-13  Score=87.57  Aligned_cols=59  Identities=22%  Similarity=0.333  Sum_probs=52.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC---CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR---TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~---~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ . +++|+|++||+|.|+++.+++| |.++..   +++.|+||++||+++..
T Consensus         9 ~~~~~~alydy~~-~-~~eLs~~~Gd~i~vl~~~~~gW-w~g~~~~~~~g~~G~~P~~yv~~~~~   70 (75)
T 2egc_A            9 LKDVYVSIADYEG-D-EETAGFQEGVSMEVLERNPNGW-WYCQILDGVKPFKGWVPSNYLEKKNS   70 (75)
T ss_dssp             CCEEEEECSCBCC-C-SSSCCBCTTCEEEECEECTTSE-EEEEECCSSSCEEEEEEGGGEEECCS
T ss_pred             CCeEEEECCCcCC-C-CCcCCCCCCCEEEEEEcCCCCe-EEEEeCCCCCCcEEEEehHHCEECCC
Confidence            3467999999999 7 8999999999999999999999 988875   36899999999998753

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.45  E-value=4.2e-13  Score=90.62  Aligned_cols=60  Identities=22%  Similarity=0.509  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeec--cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE--LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~--~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+  .+.+| |.++..+++.|+||++||+.+..
T Consensus        16 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~~   77 (91)
T 1wx6_A           16 VLHVVQTLYPFSS-VTEEELNFEKGETMEVIEKPENDPEW-WKCKNARGQVGLVPKNYVVVLSD   77 (91)
T ss_dssp             CCEEEEESSCCCC-SSSSBCCCCTTCEEEEEECCSSCTTE-EEEECTTCCEEEEEGGGEEEEEE
T ss_pred             ccEEEEEeecCCc-CCCCcccCCCCCEEEEEECCCCCCCc-EEEEeCCCCEEEEchHHEEECCC
Confidence            3467999999999 8899999999999999998  68899 99985589999999999998864

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.45  E-value=1.2e-13  Score=85.26  Aligned_cols=53  Identities=25%  Similarity=0.438  Sum_probs=48.6

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecC-CCceeEEeCCcEE
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHR-TGEQGMIFRDLVE  189 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~-~~~~G~~P~~~v~  189 (235)
                      .++|+|+|.+ ..+++|+|++||+|.|+...+ ++| |.++.. +|+.|+||++||+
T Consensus         3 ~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W-~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A            3 ENKVLYAYVQ-KDDDEITITPGDKISLVARDTGSGW-TKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             CCEECSCBCC-CSTTBCCBCTTCCEEEEECCSSSSE-EEEEETTTTEEEEEEGGGEE
T ss_pred             EEEEeeeECC-cCCCcccCCCCCEEEEeEcCCCCCC-EEEEECCCCCEEEEEHHHEE
Confidence            4789999999 889999999999999999886 799 988876 8999999999996

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.45  E-value=1.4e-13  Score=119.35  Aligned_cols=97  Identities=22%  Similarity=0.299  Sum_probs=83.8

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccccC--
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI--   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~--   71 (235)
                      +||||+|++.+|.|+|||+.     ++.|+||+|.+.+++ | +.....|.|+.+||+||+.+..++...|..||+..  
T Consensus        90 ~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~Sl~~Li~~y~~~~~~l~~~l~~~~~~~~~  169 (452)
T 1fmk_A           90 TFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKP  169 (452)
T ss_dssp             EEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHHHHHTTCCTTSSSCCCEECCCCCC
T ss_pred             eEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccCCHHHHHHHhhhccccchhhcccccccccc
Confidence            59999999999999999997     568999999986554 4 66778999999999999999998888888877643  


Q ss_pred             ------CCceeecceEEEEEeecCeeEeeeEE
Q psy13524         72 ------NLGIFIPSAIFRVTAVCGDFYIGGRQ   97 (235)
Q Consensus        72 ------~~~~~l~~~~~~l~~~~g~~~~g~~~   97 (235)
                            .+.|++.+.++++.+.+|.|.+|.+.
T Consensus       170 ~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy  201 (452)
T 1fmk_A          170 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVW  201 (452)
T ss_dssp             CCSSSSTTCSBCCGGGEEEEEEEEECSSCEEE
T ss_pred             ccCCCCccccccChhHceeeeeecCCCCeEEE
Confidence                  57899999999999999998888554

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.45  E-value=1.1e-13  Score=94.45  Aligned_cols=60  Identities=22%  Similarity=0.384  Sum_probs=53.7

Q ss_pred             CccEEEEeeccCCCCC------CCCcccCCCCEEEEe-eccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPD------TDELTFQKGDIFFVH-NELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~------~~eL~~~~gd~i~v~-~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ .+      +++|+|++||+|.|+ ...+++| |.++..+|+.|+||++||+.+..
T Consensus        16 ~~~~~~Alydy~~-~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gW-w~g~~~~g~~G~~Psnyv~~~~~   82 (96)
T 1wie_A           16 KVHLCVARYSYNP-FDGPNENPEAELPLTAGKYLYVYGDMDEDGF-YEGELLDGQRGLVPSNFVDFVQD   82 (96)
T ss_dssp             CEEEEEESSCCCG-GGSSCSCTTTBCCCCTTCEEEEESSCCSSSC-CEEEETTCCBCBCCTTSEECCCS
T ss_pred             CCcEEEECCccCC-CcccCCCCCCeeeECCCCEEEEeEecCCCCE-EEEEECCCCEEEEchHHEEEcCC
Confidence            4567999999999 67      899999999999999 7778999 99997789999999999998764

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.45  E-value=1.1e-13  Score=112.53  Aligned_cols=69  Identities=20%  Similarity=0.333  Sum_probs=60.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcC-CcccCCHHHHHHHhhhCC-----cccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMG-GRTFECLDAVINRYRKEQ-----IVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~-~~~F~sl~eLi~~y~~~~-----~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+.++.|+||+|.+.+++| +.+ ...|+||.+||+||+.++     .++.+.|..||++
T Consensus       217 tFLVR~S-s~~g~y~LSv~~~~~V~H~rI~~~~~g~~~~~~~~~F~SL~eLV~~Y~~~~L~~~~~gl~~~L~~Pv~~  292 (302)
T 2y3a_B          217 TFLIRES-SQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLAHPVRA  292 (302)
T ss_dssp             BEEBCCC-SSTTCEEEEEECSSSEEEEEEEEETTEEESBTTBCCCSSHHHHHHTTSSSCSTTTCSSCCCCCSBCSCC
T ss_pred             cEEEEec-cCCCceEEEEEeCCeeEEEEEEECCCceEEeCCCCCCCCHHHHHHHHHhCCccccCCCCceeeCCccCC
Confidence            6999999 8899999999999999999999988884 554 369999999999999865     4578899999987

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.45  E-value=3.3e-13  Score=88.25  Aligned_cols=58  Identities=31%  Similarity=0.546  Sum_probs=52.8

Q ss_pred             cEEEEeeccCCCC-CCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMP-DTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~-~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ . .+++|+|++||+|.|+... +.+| |.++..+|+.|+||++||+.+..
T Consensus        10 ~~~~al~dy~~-~~~~~eLs~~~Gd~i~v~~~~~~~gW-~~g~~~~g~~G~~P~~yv~~~~~   69 (77)
T 2enm_A           10 TKARVMYDFAA-EPGNNELTVTEGEIITVTNPNVGGGW-LEGKNNKGEQGLVPTDYVEILPN   69 (77)
T ss_dssp             EEEEESSCCCC-CTTSSBCCCCTTCEEEEEESCCSSSE-EEEECTTCCEEEEETTTEEEECC
T ss_pred             cEEEECccCCC-CCCCCeecCCCCCEEEEeEccCCCCe-EEEEECCCCEEEeehHHeEECCC
Confidence            67999999999 7 8899999999999999985 7999 99995589999999999998864

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=1.9e-13  Score=89.86  Aligned_cols=59  Identities=24%  Similarity=0.435  Sum_probs=53.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.. +.+| |.++.. +++.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~-~~gW-~~g~~~~~g~~G~fP~~yv~~~~~   75 (79)
T 1x6b_A           16 DLPQVEITKAFFA-KQADEVTLQQADVVLVLQQ-EDGW-LYGERLRDGETGWFPEDFARFISG   75 (79)
T ss_dssp             SCCEEEESSCCCC-CSSSBCCCCTTEEEEEEEE-ETTE-EEEEETTTCCEEEECGGGCEEEES
T ss_pred             CCCEEEECeeECC-CCcCCcCCCCCCEEEEEEe-CCCE-EEEEECCCCCEEEEchHHEEECCC
Confidence            4468999999999 8899999999999999999 9999 888875 89999999999998753

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=1.8e-13  Score=87.33  Aligned_cols=58  Identities=21%  Similarity=0.520  Sum_probs=52.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+++ +++| |.++..+++.|+||++||+.+.
T Consensus         6 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxb_A            6 SGKYVKILYDFTA-RNANELSVLKDEVLEVLED-GRQW-WKLRSRSGQAGYVPCNILGEAS   63 (68)
T ss_dssp             SCCCEECSSCBCC-SSSSBCCBCTTCEEEEEEC-SSSE-EEEECTTSCEEEEETTTCCBCC
T ss_pred             CCEEEEECccCCC-CCCCccCCCCCCEEEEEEc-CCCE-EEEEECCCCEEEEEHHHeEECC
Confidence            3467899999999 8999999999999999998 5899 9998668999999999998764

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.44  E-value=2.1e-13  Score=89.82  Aligned_cols=59  Identities=19%  Similarity=0.463  Sum_probs=52.6

Q ss_pred             CccEEEEeeccCCCCCCC-CcccCCCCEEEEeeccCC-----CeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTD-ELTFQKGDIFFVHNELGD-----GWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~-eL~~~~gd~i~v~~~~~~-----~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..++ +|+|++||+|.|+.+.+.     +| |.++..+|+.|+||++||+.+.
T Consensus        13 ~~~~~~alydy~~-~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~W-w~g~~~~g~~G~~P~~yv~~~~   77 (80)
T 2v1r_A           13 KLEFARALYDFVP-ENPEMEVALKKGDLMAILSKKDPLGRDSDW-WKVRTKNGNIGYIPYNYIEIIK   77 (80)
T ss_dssp             GCEEEEESSCBCC-SSTTTBCCBCTTCEEEEEEEECTTSCEEEE-EEEECTTSCEEEEEGGGEEEC-
T ss_pred             cCEEEEECccCCC-CCCCCEecCCCCCEEEEEECCCCCCCCCCc-EEEEeCCCCeEEEEHHHeEEcC
Confidence            3467999999999 7888 999999999999999876     99 9998878999999999999874

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.44  E-value=5.3e-13  Score=86.54  Aligned_cols=57  Identities=23%  Similarity=0.466  Sum_probs=52.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+.. +++| |.++. +++.|+||++||+.+..
T Consensus        10 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~g~~-~g~~G~~P~~yv~~~~~   66 (74)
T 1j3t_A           10 NLKAQALCSWTA-KKDNHLNFSKHDIITVLEQ-QENW-WFGEV-HGGRGWFPKSYVKIIPG   66 (74)
T ss_dssp             CCEEEESSCBCC-CSTTBCCBCTTCEEEEEEE-CSSE-EEEES-TTCCCEEEGGGEEECCC
T ss_pred             CeEEEECCCCCC-CCCCccCCCCCCEEEEEec-CCCE-EEEEE-CCcEEEEchHHeEECCC
Confidence            467999999999 8899999999999999998 5789 99998 89999999999998864

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.44  E-value=2.4e-13  Score=92.17  Aligned_cols=58  Identities=26%  Similarity=0.510  Sum_probs=52.6

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..++||+|++||+|.|+.+.  +.+| |.++. +|+.|+||++||+.+..
T Consensus         5 ~~~~~Alydy~a-~~~~eLsf~~Gd~i~v~~~~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~   64 (93)
T 1uff_A            5 SSGYRALYPFEA-RNHDEMSFNSGDIIQVDEKTVGEPGW-LYGSF-QGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             CCCEEESSCBCC-CSSSCCCBCTTCEEEECSSCCCSSSE-EEEEE-TTEEEEEETTTEEECCS
T ss_pred             CEEEEECccCCC-CCCCCcCCCCCCEEEEeEccCCCCCE-EEEEE-CCCEEEechHHeEEcCC
Confidence            457899999999 88999999999999999986  7899 99997 89999999999998864

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.44  E-value=2.1e-13  Score=87.46  Aligned_cols=59  Identities=29%  Similarity=0.424  Sum_probs=52.9

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEe-cCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTA-HRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~-~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++ ..+++.|+||++||+++..
T Consensus         7 ~~~~~al~~y~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2cuc_A            7 GNMFVALHTYSA-HRPEELDLQKGEGIRVLGKYQDGW-LKGLSLLTGRTGIFPSDYVIPVSG   66 (70)
T ss_dssp             SCCEECCSCBCC-CSTTBCCBCTTCEEEEEEEEETTE-EEEEETTTCCEEEEEGGGCEECCC
T ss_pred             CcEEEECeeECc-CCCCcCCCCCCCEEEEEEecCCCe-EEEEECCCCCEEEEchHHeEECcC
Confidence            457899999999 899999999999999999988999 8888 3489999999999998753

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.44  E-value=5.4e-13  Score=87.86  Aligned_cols=60  Identities=15%  Similarity=0.372  Sum_probs=53.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCC----CceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRT----GEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~----~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++...    ++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~gW-w~g~~~~~g~~~~~G~fP~~yv~~~~~   69 (80)
T 1ue9_A            6 SGEIAQVTSAYVA-SGSEQLSLAPGQLILILKKNTSGW-WQGELQARGKKRQKGWFPASHVKLLGP   69 (80)
T ss_dssp             CCEEEEECSCCCC-CSTTBCCCCTTCEEEEEEECSSSE-EEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred             CCeEEEECcccCC-CCCCCCCCCCCCEEEEEEecCCCc-EEEEECCCCCCCcEEEEchHHeEECCC
Confidence            3467999999999 899999999999999999989999 8888742    4899999999998864

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.44  E-value=2e-13  Score=87.56  Aligned_cols=60  Identities=17%  Similarity=0.350  Sum_probs=53.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++.. +++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ecz_A            6 SGGEAIAKFNFNG-DTQVEMSFRKGERITLLRQVDENW-YEGRIPGTSRQGIFPITYVDVISG   66 (70)
T ss_dssp             CCBCEEESSCCCC-CSTTBCCCCTTCBCEEEEEEETTE-EEEEETTTTEEEEECTTTEEESSS
T ss_pred             CCCEEEECccCCC-CCcCCcCCCCCCEEEEEEecCCCe-EEEEECCCCCEEEEchHHEEECCC
Confidence            3457999999999 899999999999999999988999 999884 36999999999998753

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.44  E-value=5.1e-13  Score=90.39  Aligned_cols=60  Identities=18%  Similarity=0.457  Sum_probs=53.8

Q ss_pred             CccEEEEeeccCCCCCCC-CcccCCCCEEEEeeccCC-----CeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTD-ELTFQKGDIFFVHNELGD-----GWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~-eL~~~~gd~i~v~~~~~~-----~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..++ +|+|++||+|.|+.+.+.     +| |.++..+|+.|+||++||+.+..
T Consensus        13 ~~~~~~alydy~~-~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gW-w~g~~~~g~~G~~P~~yv~~~~~   78 (92)
T 1jqq_A           13 KLEFARALYDFVP-ENPEMEVALKKGDLMAILSKKDPLGRDSDW-WKVRTKNGNIGYIPYNYIEIIKR   78 (92)
T ss_dssp             TCEEEEESSBBCC-SSTTTBCCBCTTCEEEEEEEECTTSCEEEE-EEEEETTSCEEEEEGGGEEECCC
T ss_pred             cCEEEEECccCCC-CCCCCCcCCCCCCEEEEEECCCCCCCCCCC-eEEEeCCCCEEEEehHHeEECCC
Confidence            4567999999999 7888 999999999999999876     99 99987789999999999998854

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=2.1e-13  Score=88.97  Aligned_cols=58  Identities=31%  Similarity=0.651  Sum_probs=51.4

Q ss_pred             CccEEEEeeccCCCCC-------CCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPD-------TDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~-------~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..       +++|+|++||+|.|+.+.+ ++| |.++. +++.|+||++||+.+.
T Consensus         6 ~~~~~~Al~dy~~-~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~   71 (76)
T 2csi_A            6 SGRRMVALYDYDP-RESSPNVDVEAELTFCTGDIITVFGEIDEDGF-YYGEL-NGQKGLVPSNFLEEVS   71 (76)
T ss_dssp             CSEEEECSSCCCT-TTTSCSSSTTTSCCCCTTCEEEEESSCCSSSE-EEEEE-TTEEEEEEGGGCCBCC
T ss_pred             CccEEEEcccCCC-CCcccCCCCCCcccCCCCCEEEEeEecCCCCe-EEEEE-CCcEEEEehHHEEECC
Confidence            3467999999999 66       8999999999999999876 479 99988 8999999999998774

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.44  E-value=3e-13  Score=90.71  Aligned_cols=59  Identities=24%  Similarity=0.436  Sum_probs=54.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+.+| |.++. +++.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~   74 (88)
T 2cub_A           16 LNMPAYVKFNYMA-EREDELSLIKGTKVIVMEKCSDGW-WRGSY-NGQVGWFPSNYVTEEGD   74 (88)
T ss_dssp             CCEEEEESSCCCC-CSTTBCCCCTTEEEEEEEECTTSE-EEEEE-TTEEEEEEGGGEEECCC
T ss_pred             CCCEEEEccccCC-CCCCCcCCCCCCEEEEEEccCCCe-EEEEE-CCcEEEEehHHEEECCC
Confidence            3467999999999 899999999999999999999999 99998 99999999999998854

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=5.8e-13  Score=90.97  Aligned_cols=59  Identities=24%  Similarity=0.461  Sum_probs=51.8

Q ss_pred             CccEEEEeeccCCCC--------CCCCcccCCCCEEEEeec-cCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMP--------DTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~--------~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ .        .+++|+|++||+|.|+.+ .+.|| |.++. +|+.|+||++||+.+..
T Consensus        16 ~~~~~~Alydy~~-~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~   83 (97)
T 2csq_A           16 PARIFVALFDYDP-LTMSPNPDAAEEELPFKEGQIIKVYGDKDADGF-YRGET-CARLGLIPCNMVSEIQA   83 (97)
T ss_dssp             CCEEEECSSCBCT-TTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCE-EEEEE-TTEEEEEETTTSEECCC
T ss_pred             CceEEEEccccCC-CcccccCCCCCCccCCCCCCEEEEEEecCCCCe-EEEEE-CCcEEEEehHHeEECCC
Confidence            3467899999999 6        688999999999999975 45779 99998 89999999999999864

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.43  E-value=1.9e-13  Score=89.16  Aligned_cols=59  Identities=25%  Similarity=0.543  Sum_probs=53.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +++.|+||++||+.+..
T Consensus         9 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   67 (76)
T 1ujy_A            9 HQLIVKARFNFKQ-TNEDELSVCKGDIIYVTRVEEGGW-WEGTL-NGRTGWFPSNYVREIKS   67 (76)
T ss_dssp             CCEEEECCSCBCC-SSTTSCCBCSSCCEEESSCCSSSC-EEEEE-TTEEEEECTTTSEECCH
T ss_pred             CCEEEEECccCCc-CCCCcccCCCCCEEEEEEecCCCE-EEEEE-CCCEEEechHHEEECCc
Confidence            4467999999999 889999999999999999988999 99997 99999999999998753

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=6.1e-13  Score=87.33  Aligned_cols=58  Identities=24%  Similarity=0.449  Sum_probs=51.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-CCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-TGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|++ .+.+| |.++.. +++.|+||++||+++.
T Consensus        16 ~~~~~~Alydy~a-~~~~eLs~~~Gd~i~v~~-~~~~W-w~~~~~~~g~~G~~P~~yv~~~~   74 (79)
T 2cud_A           16 DSDFLAVLSDYPS-PDISPPIFRRGEKLRVIS-DEGGW-WKAISLSTGRESYIPGICVARVS   74 (79)
T ss_dssp             CCCEEEESSCSSC-TTTSCCSSCTTCEEEEEE-EETTE-EEEEETTTCCEEEEEGGGEEEEC
T ss_pred             CCeEEEEccCCCC-CCCCcCCCCCCCEEEEEe-cCCCe-EEEEECCCCCEEEeeHHHeEEcc
Confidence            4568999999999 889999999999999999 47899 888864 6999999999999875

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.8e-13  Score=88.03  Aligned_cols=60  Identities=60%  Similarity=1.041  Sum_probs=52.3

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEe-cCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTA-HRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~-~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+...++||+|++||+|.|+...+++| |.++ ..+++.|+||++||+++.
T Consensus         6 ~~~~~~Alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~W-~~g~~~~~g~~G~~P~~yv~~~~   66 (71)
T 2gqi_A            6 SGRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGW-MWVTNLRTDEQGLIVEDLVEEVS   66 (71)
T ss_dssp             SCCCEEESSCCCCCTTSSCCCCCTTCBCCCCEECSSSC-EEEECTTTCCEEEECTTSEEECC
T ss_pred             CCCEEEECcccCCCCCCCCCCCCCCCEEEEEEecCCCE-EEEEECCCCCEEEeeHHHEEECC
Confidence            34679999999983477899999999999999989999 8888 348999999999999874

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.43  E-value=4.1e-13  Score=87.78  Aligned_cols=59  Identities=27%  Similarity=0.592  Sum_probs=52.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCC--Cce------eEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRT--GEQ------GMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~--~~~------G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++...  ++.      |+||++||+++.
T Consensus         6 ~~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~~~~~g~~~~~~~~G~~P~~yv~~~~   72 (77)
T 2d8j_A            6 SGQYFVALFDYQA-RTAEDLSFRAGDKLQVLDTSHEGW-WLARHLEKKGTGLGQQLQGYIPSNYVAEDS   72 (77)
T ss_dssp             CCEEEEESSCBCC-SSSSBCCBCTTCCEEEEECCSSSE-EEEEECSSCCSSCCCCSEEEEETTTEEECC
T ss_pred             CCCEEEEccCCCC-CCCCccCCCCCCEEEEEECCCCCe-EEEEECCCCCcCcccCCceEECHHHeeEcC
Confidence            3468999999999 889999999999999999989999 8888753  888      999999999874

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=7.6e-13  Score=84.85  Aligned_cols=58  Identities=17%  Similarity=0.328  Sum_probs=51.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|++..+ ++| |.++..+|+.|+||++||+.+.
T Consensus         7 ~~~~~alydy~~-~~~~eLs~~~Gd~i~vl~~~~~~gW-~~~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct4_A            7 GGHCVAIYHFEG-SSEGTISMAEGEDLSLMEEDKGDGW-TRVRRKEGGEGYVPTSYLRVTS   65 (70)
T ss_dssp             SCEEEESSCBCC-CSTTCCCBCTTCEEEEEECCSSSCE-EEEECSSSCEEEEEGGGEEECC
T ss_pred             CCEEEEcccCCC-CCCCcCCCCCCCEEEEEeccCCCCe-EEEEeCCCCEEEEEhHHeEEcC
Confidence            357999999999 899999999999999999864 568 9999866999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.43  E-value=2.8e-13  Score=122.13  Aligned_cols=69  Identities=22%  Similarity=0.442  Sum_probs=62.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+.++.|+||+|.+..++ | +.++..|+||.|||+||+.+++++.++|.+||++
T Consensus       191 ~FLvR~s-~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv~~y~~~~~~l~~~L~~p~~~  261 (635)
T 4fl3_A          191 KFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQK  261 (635)
T ss_dssp             CEEEEES-SSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHHHHHTTCCTTSSSCCCSBCCC
T ss_pred             eEEEEec-CCCCCEEEEEEECCEEEEEEEEECCCCCEEeCCCCccCCHHHHHHHhhhCCCCCccccCccCcC
Confidence            6999999 578999999999999999999876655 5 5566899999999999999999999999999987

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.43  E-value=3.5e-13  Score=86.91  Aligned_cols=60  Identities=23%  Similarity=0.388  Sum_probs=52.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec-cCCCeeEEEecC-CCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHR-TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+...+++|+|++||+|.|+.+ .+.+| |.++.. +++.|+||++||+.+..
T Consensus         7 ~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~gW-w~g~~~~~g~~G~fP~~yv~~~~~   68 (72)
T 1spk_A            7 GQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGW-LYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             SCEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTE-EEEEETTTCCEEEEEGGGCEECSS
T ss_pred             ceEEEEeeeeCCCCCCCCCcCCCCCEEEEeEccCCCCc-EEEEECCCCCEEEEehHHeEECCC
Confidence            46799999999426889999999999999987 78999 999874 49999999999998853

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.42  E-value=9.4e-13  Score=87.94  Aligned_cols=58  Identities=31%  Similarity=0.582  Sum_probs=52.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+. ++| |.++. .+|+.|+||++||+.+.
T Consensus        24 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~-~~W-w~g~~~~~g~~G~~P~~yv~~~~   82 (86)
T 2oi3_A           24 EDIIVVALYDYEA-IHHEDLSFQKGDQMVVLEES-GEW-WKARSLATRKEGYIPSNYVARVD   82 (86)
T ss_dssp             TSEEEEESSCCCC-SSSSCCCCCTTCEEEEEEES-SSE-EEEEETTTCCEEEEEGGGEEEGG
T ss_pred             CCcEEEECccCCC-CCCCcCcCCCCCEEEEEEcC-CCe-EEEEECCCCCEEEEehHHcEEcc
Confidence            4568999999999 88999999999999999987 599 88887 58999999999999874

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=92.85  Aligned_cols=59  Identities=29%  Similarity=0.642  Sum_probs=54.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+...+++| |.++. +|+.|+||++||+.+..
T Consensus        17 ~~~~~~Alydy~a-~~~~eLsf~~Gd~i~V~~~~~~gW-w~g~~-~g~~G~fPsnyV~~~~~   75 (92)
T 2o2o_A           17 RRRRCQVAFSYLP-QNDDELELKVGDIIEVVGEVEEGW-WEGVL-NGKTGMFPSNFIKELSG   75 (92)
T ss_dssp             SSCEEEECSCBCC-CSSSCCCBCSSCEEECCCGGGSSC-BCCEE-TTEECCBCSSSEECCSS
T ss_pred             CCeEEEEccccCC-CCCccccccCCCEEEEeEecCCCE-EEEEE-CCeEEEeehHHEEECCC
Confidence            4468999999999 899999999999999999989999 99988 99999999999998864

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.42  E-value=4.4e-13  Score=85.95  Aligned_cols=57  Identities=28%  Similarity=0.595  Sum_probs=49.6

Q ss_pred             cEEEEeeccCCCCCC--CCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDT--DELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~--~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ ..+  .+|+|++||+|.|+.. +++| |.++..+|+.|+||++||+.+..
T Consensus         6 ~~~~alydy~~-~~~~~~eLsf~~Gd~i~v~~~-~~~W-w~g~~~~g~~G~~P~~yv~~~~~   64 (70)
T 2vkn_A            6 YKAKALYPYDA-DDDDAYEISFEQNEILQVSDI-EGRW-WKARRANGETGIIPSNYVQLIDG   64 (70)
T ss_dssp             EEEEESSCBCC-CSSSTTBCCBCTTCEEEEECT-TSSE-EEEECTTSCEEEEEGGGEEEEEE
T ss_pred             EEEEECccCCC-CCCCCCcccCCCCCEEEEEEc-CCCe-EEEEECCCCEEEEehHHEEECCC
Confidence            46899999999 543  5999999999999987 7899 99976599999999999998753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.41  E-value=3.7e-13  Score=118.00  Aligned_cols=97  Identities=21%  Similarity=0.253  Sum_probs=84.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe--EEcCCcccCCHHHHHHHhhhCCcccceeeCCccccC-------
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI-------   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~--~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~-------   71 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++  |+.....|.++.+||+||.....++...|..|+++.       
T Consensus       128 ~fLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~eLv~~~~~~~~g~~~~l~~~~~~~~~~~~~~  207 (495)
T 1opk_A          128 SFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIYG  207 (495)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTCCTTSSSCCCEECCCCSCCCCSS
T ss_pred             eEEEEeCCCCCCceEEEEeeCCeEEEEEEEecCCCceEeccCccchhHHHHhhhhcccccccchhccccccccccccccc
Confidence            59999999999999999999999999999886554  567788999999999999999888888887777643       


Q ss_pred             ----CCceeecceEEEEEeecCeeEeeeEE
Q psy13524         72 ----NLGIFIPSAIFRVTAVCGDFYIGGRQ   97 (235)
Q Consensus        72 ----~~~~~l~~~~~~l~~~~g~~~~g~~~   97 (235)
                          .+.|++.+.++++.+.+|.|.+|.+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy  237 (495)
T 1opk_A          208 VSPNYDKWEMERTDITMKHKLGGGQYGEVY  237 (495)
T ss_dssp             SCSSSSCCBCCGGGEEEEEESGGGTTSSEE
T ss_pred             cCccccccccCHHHceeeeEecCCCCeEEE
Confidence                47899999999999999998887553

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.41  E-value=3.5e-13  Score=119.25  Aligned_cols=98  Identities=22%  Similarity=0.310  Sum_probs=83.6

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeCCe--EEcCCcccCCHHHHHHHhhhCCcccceeeCCccccC--
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI--   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~~~--~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~--   71 (235)
                      +||||+|+..+|.|+|||+.     ++.|+||+|.+.+++  |+.....|.|+.+||+||+.+.+++...|..+|+..  
T Consensus       173 ~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F~SL~eLv~~y~~~~~~~~~~l~~~~~~~~~  252 (535)
T 2h8h_A          173 TFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKP  252 (535)
T ss_dssp             EEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEESSHHHHHHHHHHCCTTSSSCCCEECCCCCC
T ss_pred             eEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccccChHHhheeeccccCccccccccccccccc
Confidence            59999999999999999997     458999999875544  577888999999999999999998888888877633  


Q ss_pred             ------CCceeecceEEEEEeecCeeEeeeEEE
Q psy13524         72 ------NLGIFIPSAIFRVTAVCGDFYIGGRQF   98 (235)
Q Consensus        72 ------~~~~~l~~~~~~l~~~~g~~~~g~~~f   98 (235)
                            .+.|+|.+..+++.+.+|.|.+|.+..
T Consensus       253 ~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~  285 (535)
T 2h8h_A          253 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM  285 (535)
T ss_dssp             CCSSSSTTCSBCCGGGEEEEEEEEECSSEEEEE
T ss_pred             cccccCccceecchhhhhhheecccCCCeEEEE
Confidence                  578999999999999999988886543

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.40  E-value=2.2e-13  Score=94.48  Aligned_cols=56  Identities=20%  Similarity=0.406  Sum_probs=50.2

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCce---eEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQ---GMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~---G~~P~~~v~~~~  192 (235)
                      ..++|+|||.+ +.++||+|++||+|.|+.+.+++| |.++. +++.   |+||++||+.+.
T Consensus         6 ~~~~Alydy~a-~~~~ELsf~~Gd~i~vl~~~~~~W-w~g~~-~g~~g~~G~fPsnYV~~~~   64 (108)
T 2rqv_A            6 LYAIVLYDFKA-EKADELTTYVGENLFICAHHNCEW-FIAKP-IGRLGGPGLVPVGFVSIID   64 (108)
T ss_dssp             CCEEESSCCCC-CSSSBCCCCSSEEECCCCEETTTE-EEECC-SSSSCCCEEEESTTCBCCC
T ss_pred             eEEEECCCcCC-CCCCcCCcCCCCEEEEeEecCCCE-EEEEE-CCccCCeeEeecceEEEec
Confidence            46899999999 899999999999999999889999 99987 5555   999999998764

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=3.8e-14  Score=99.38  Aligned_cols=49  Identities=16%  Similarity=0.276  Sum_probs=43.6

Q ss_pred             CCceeEEeCCcEEeccCCCCCCCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        177 TGEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       177 ~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +|+.|++|+||+.        ++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         3 ~g~~G~ip~n~v~--------~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~   51 (111)
T 2eo3_A            3 SGSSGMSSARFDS--------SDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTC   51 (111)
T ss_dssp             CCCCCSCSCCCCT--------TCHHHHEEESCCHHHHHHHHSSCCTTCEEEEECSSS
T ss_pred             CCccccccccccc--------cCCCCcccCCCCHHHHHHHhcCCCCceEEEEeecCC
Confidence            6889999999973        455899999999999999998777999999999874

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.39  E-value=4.7e-13  Score=92.85  Aligned_cols=58  Identities=24%  Similarity=0.472  Sum_probs=50.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec-cCCC--eeEEEecCC-------CceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDG--WLWVTAHRT-------GEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~-~~~~--w~w~~~~~~-------~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ .++++|+|++||+|.|+.+ .+.|  | |.++..+       |+.|+||+|||+.+.
T Consensus        22 ~~~~~Alydy~a-~~~~ELsf~~GDiI~Vl~k~~~~g~dW-W~G~~~~~~~~~~~g~~G~fPsnYV~~~~   89 (108)
T 1i1j_A           22 ISMAVALQDYMA-PDCRFLTIHRGQVVYVFSKLKGRGRLF-WGGSVQGDYYGDLAARLGYFPSSIVREDQ   89 (108)
T ss_dssp             SEEEEESSCBCC-SSTTBCCBCTTCEEEEEEEECGGGTTE-EEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             eeEEEECCccCC-CCCCccccCCCCEEEEEEecCCCCCCE-EEEEECCccccCCCCCEEEEchhHEEEcc
Confidence            467999999999 8999999999999999998 3444  9 9998743       899999999999875

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.39  E-value=4.1e-13  Score=86.62  Aligned_cols=57  Identities=21%  Similarity=0.563  Sum_probs=50.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC--CCce---eEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR--TGEQ---GMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~---G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.| .+.+++| |.++..  +|+.   |+||++||++++
T Consensus        10 ~~~~~alydy~~-~~~~eLs~~~Gd~i~v-~~~~~~W-w~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A           10 GPKYVGLWDFKS-RTDEELSFRAGDVFHV-ARKEEQW-WWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             CCEEECCTTCBC-SSTTSCBCCTTCCEEE-EEECSSC-EEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             CcEEEEcccCCC-CCcCCcCCCCCCEEEE-eeCCCCE-EEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            468999999999 8999999999999999 8889999 888875  5888   999999998763

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.38  E-value=5.7e-13  Score=88.95  Aligned_cols=55  Identities=20%  Similarity=0.486  Sum_probs=49.7

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ...++|+|+|.+ ..+++|+|.+||+|.|++. +++| |.++..+|+.|+||++||++
T Consensus        31 ~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~-~~~W-w~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           31 EVIVIAKWDYTA-QQDQELDIKKNERLWLLDD-SKTW-WRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             CEEEEESSCCCC-CSSSBCCCCTTEEEEEEEC-CSSE-EEEECTTSCEEEEEGGGBCC
T ss_pred             ceEEEECccCCC-CCCCEeccCCCCEEEEEec-CCCe-EEEEECCCCEEEeehHHEEe
Confidence            367999999999 8899999999999999998 7899 99986589999999999863

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.37  E-value=7.7e-13  Score=85.52  Aligned_cols=54  Identities=30%  Similarity=0.589  Sum_probs=49.2

Q ss_pred             EEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        136 IVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       136 ~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ++|+|+|.+  ++++|+|++||+|.|+.+.+++| |.++. +|+.|+||++||+++..
T Consensus         3 a~alydy~~--~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   56 (73)
T 2kxd_A            3 APPLPPYSA--GGREVTMKKGDILTLLNSTNKDW-WKVEV-NDRQGFVPAAYVKKLDS   56 (73)
T ss_dssp             CCCCCSSCC--CSCCCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEECCS
T ss_pred             EEEeeeeCC--CCCEeeEcCCCEEEEEEecCCCE-EEEEE-CCCEEEEehHHeEEcCC
Confidence            678999997  57999999999999999989999 99986 99999999999998854

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.36  E-value=1.9e-12  Score=112.29  Aligned_cols=98  Identities=21%  Similarity=0.351  Sum_probs=83.4

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeCCe--EEcCCcccCCHHHHHHHhhhCCcccceeeCCccccC--
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKAVR--YLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI--   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~~~--~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~--   71 (235)
                      +||||+|++.+|.|+|||+.     ++.|+||+|.+.+++  |+.....|.++.+|++||++...++...+..|+...  
T Consensus        95 ~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLv~~y~~~~~~l~~~~~~~~~~~~~  174 (454)
T 1qcf_A           95 SFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCMSSKP  174 (454)
T ss_dssp             CEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTSSCTTSSSCCCSBCCCCCC
T ss_pred             eEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeCccccCCHHHHHHHHHhccCCccccccccccccCc
Confidence            59999999999999999998     678999999886554  467778999999999999998888877777776432  


Q ss_pred             -----CCceeecceEEEEEeecCeeEeeeEEE
Q psy13524         72 -----NLGIFIPSAIFRVTAVCGDFYIGGRQF   98 (235)
Q Consensus        72 -----~~~~~l~~~~~~l~~~~g~~~~g~~~f   98 (235)
                           .+.|++.+..+++.+.+|.|.+|.+..
T Consensus       175 ~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~  206 (454)
T 1qcf_A          175 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM  206 (454)
T ss_dssp             CCCCCTTCSBCCGGGEEEEEEEECCSSEEEEE
T ss_pred             cccccccceeechHHeEEEEEcccCCceEEEE
Confidence                 578999999999999999988886643

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.35  E-value=1e-12  Score=89.91  Aligned_cols=58  Identities=26%  Similarity=0.530  Sum_probs=53.2

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|++||+|.|+...+.+| |.++. +|+.|+||++||+.+.+
T Consensus        34 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   91 (98)
T 1udl_A           34 VCQVIAMYDYAA-NNEDELSFSKGQLINVMNKDDPDW-WQGEI-NGVTGLFPSNYVKMTTD   91 (98)
T ss_dssp             SEEEEESSCCCC-SSTTSCCCCTTCEEEECBCCSSSE-EBCBS-SSCBCCEETTSEEECCC
T ss_pred             ceEEEECCCCCC-CCCCccCCcCCCEEEEEEecCCCE-EEEEE-CCcEEEEehHHeEEcCC
Confidence            467899999999 889999999999999999988999 99886 89999999999998764

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.35  E-value=2.8e-12  Score=93.52  Aligned_cols=59  Identities=25%  Similarity=0.408  Sum_probs=53.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-CCCeeEEEecCCCceeEEeCCcEEeccCC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLVEDLDET  194 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~~~~~~G~~P~~~v~~~~~~  194 (235)
                      ...++|+|+|.+ .++++|+|++||+|.|+.+. ++|| |.++. +|+.|+||++||+.+..+
T Consensus         5 ~~~~~Alydy~a-~~~~ELsf~~Gd~i~Vl~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~~~   64 (142)
T 2kbt_A            5 FGTAKARYDFCA-RDRSELSLKEGDIIKILNKKGQQGW-WRGEI-YGRIGWFPSNYVEEDYSE   64 (142)
T ss_dssp             CCEEEESSCCCC-SSSSBCCCCTTCEEEEEECCCSSSE-EEEEE-TTEEEEEETTSEEESSCC
T ss_pred             CeEEEECCccCC-CCCCcCCCCCCCEEEEEEecCCCCe-EEEEE-CCeeEEechHHEEEcccc
Confidence            467999999999 88999999999999999984 8899 99998 999999999999988643

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.35  E-value=1.5e-12  Score=112.75  Aligned_cols=98  Identities=23%  Similarity=0.298  Sum_probs=86.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCcccceeeCCccccC--------
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTRI--------   71 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~~--------   71 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|....++| +.+...|.++.+||+||+....++...|..|+...        
T Consensus       103 ~FlvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~i~~~~~F~sl~eLv~~y~~~~~~~~~~l~~~~~~~~~~~~~~~  182 (450)
T 1k9a_A          103 LFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQDE  182 (450)
T ss_dssp             EEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHHHCCTTSSSCCCEECCCTTCEEHHHH
T ss_pred             eEEEEecCCCCCceEEEEEeCCeeeEEEEEecCCceEeccccccccHHHHHhhhcccccchhhhccccccccCcccchhh
Confidence            599999999999999999999999999998777774 77788999999999999999988888888877543        


Q ss_pred             --CCceeecceEEEEEeecCeeEeeeEEE
Q psy13524         72 --NLGIFIPSAIFRVTAVCGDFYIGGRQF   98 (235)
Q Consensus        72 --~~~~~l~~~~~~l~~~~g~~~~g~~~f   98 (235)
                        .++|++...++++.+.+|.|.+|.+..
T Consensus       183 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~  211 (450)
T 1k9a_A          183 FYRSGWALNMKELKLLQTIGKGEFGDVML  211 (450)
T ss_dssp             HHHTTCBCCGGGEEEEEEEEECSSEEEEE
T ss_pred             hcccccccChHHeEEEeeecCcCCeeEEE
Confidence              478999999999999999988886543

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.35  E-value=1.6e-12  Score=92.13  Aligned_cols=58  Identities=19%  Similarity=0.353  Sum_probs=52.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec--CCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH--RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~--~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++.  .+|+.|+||++||+.++.
T Consensus         4 ~~~~Alydy~a-~~~~ELsf~~Gd~i~vl~~~~~~W-w~g~~~~~~g~~G~~P~nyv~~~~~   63 (120)
T 2kym_A            4 LFAVTLYEFKA-ERDDELDVSPGENLSICAHYDYEW-FIAKPINRLGGPGLVPVSYVRIIDL   63 (120)
T ss_dssp             CEEEECSCBCC-CSTTCCCBCTTCEEEEEEEETTTE-EEEEESSSCSCCCCEEGGGEEEECS
T ss_pred             EEEEEcccCCC-CCCCccCCCCCCEEEEEEecCCCE-EEEEECCCCCCEEEEchHHEEEccC
Confidence            46899999999 899999999999999999999999 99985  478899999999998753

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.35  E-value=1.7e-12  Score=91.26  Aligned_cols=58  Identities=28%  Similarity=0.468  Sum_probs=51.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEee-----ccCCCeeEEEecC---------CCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHN-----ELGDGWLWVTAHR---------TGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~-----~~~~~w~w~~~~~---------~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.     ..+.+| |.++..         +|+.|+||++||+++
T Consensus        43 ~~~~~~Alydy~a-~~~dELsf~~GDiI~Vl~~~~~~~~~~gW-w~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           43 FMFKVQAQHDYTA-TDTDELQLKAGDVVLVIPFQNPEEQDEGW-LMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             CCEEEEESSCBCC-SSTTBCCBCTTCEEEEECCSCGGGCCTTE-EEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             cceEEEECCccCC-CCCCccCcCCCCEEEEeeccCCcccCCCe-EEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            4467999999999 899999999999999999     778999 988652         378999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.34  E-value=1.7e-12  Score=116.56  Aligned_cols=69  Identities=19%  Similarity=0.303  Sum_probs=62.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+| +.+|.|+|||+.++.|+||+|.+..++ | +.+...|+||.|||+||+.+++++.+.|..||+.
T Consensus       186 ~FLvR~s-~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv~~y~~~~~~l~~~L~~pC~~  256 (613)
T 2ozo_A          186 KFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYCLKEACPN  256 (613)
T ss_dssp             CEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTCCEECTTSCEESSHHHHHHHHHHCCTTCSSCCCSBCCC
T ss_pred             eEEEEec-CCCCCEEEEEEECCeEEEEEEEECCCCCEEECCCCCcCCHHHHHHHHhhCCCCceecccccccc
Confidence            6999999 678999999999999999999976555 5 5568899999999999999999999999999976

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.34  E-value=1.7e-12  Score=84.17  Aligned_cols=58  Identities=22%  Similarity=0.401  Sum_probs=51.3

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..+++|+|.+||+|.|++.. ++| |.++..  +|+.|+||++||+..+.
T Consensus        11 ~~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~-~~W-~~g~~~~~~g~~G~~P~~yv~~~~~   70 (74)
T 2m0y_A           11 EKYGVAFYNYDA-RGADELSLQIGDTVHILETY-EGW-YRGYTLRKKSKKGIFPASYIHLKEA   70 (74)
T ss_dssp             CSCEEECSEECC-CSSSBCCEETTEEEEEEEBS-SSC-EEEEESSCSSCCEEECGGGEEECCC
T ss_pred             CeEEEEceeeCC-CCcCcccCCCCCEEEEEEcC-CCe-EEEEECCCCCCEEEEehHHEEEecc
Confidence            467999999999 89999999999999999984 889 988864  58999999999997753

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.34  E-value=2.4e-12  Score=87.25  Aligned_cols=60  Identities=20%  Similarity=0.358  Sum_probs=52.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC----CCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG----DGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~----~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|++||+|.|+.+.+    .+| |.++..+++.|+||++||+.+..
T Consensus        16 ~~~~~~alydy~a-~~~~eLsf~~Gd~i~v~~~~~~~~~~gW-w~g~~~~~~~G~~P~~yv~~~~~   79 (93)
T 1wxu_A           16 DHVVARAEYDFVA-VSDEEISFRAGDMLNLALKEQQPKVRGW-LLASLDGQTTGLIPANYVKILGK   79 (93)
T ss_dssp             CBBCEEESSCBCC-SSSSBCCBCSSCBCEECCTTTSCSCSSC-EEEESSSSSCEEECSTTEEECCC
T ss_pred             CCEEEEECccCCC-CCCCccCcCCCCEEEEEECCCCCCCCCc-EEEEeCCcCEEEEehHHEEEcCC
Confidence            3467999999999 889999999999999999876    589 99987444499999999998854

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.33  E-value=1.9e-12  Score=87.10  Aligned_cols=59  Identities=22%  Similarity=0.398  Sum_probs=50.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeec---------------cCCCeeEEEecC-CCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE---------------LGDGWLWVTAHR-TGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~---------------~~~~w~w~~~~~-~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|+..               .+.|| |.++.. +|+.|+||++||+.+.
T Consensus        10 ~~~~~~Alydy~a-~~~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW-~~G~~~~~g~~G~fP~nyVe~i~   84 (90)
T 3o5z_A           10 EGFQYRALYPFRR-ERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGW-MPGLNERTRQRGDFPGTYVEFLG   84 (90)
T ss_dssp             SEEEEEECSCBCC-CSTTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCE-EEEEETTTCCEEEEEGGGEEEEE
T ss_pred             CCcEEEEeeeECC-CCCCccCCcCCCEEEEEeccccccccccccccCCCCCCc-eEEEeCCCCCEEEeehHHEEEec
Confidence            4567999999999 8999999999999999843               23389 888754 6999999999999875

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.33  E-value=9.6e-14  Score=90.82  Aligned_cols=56  Identities=16%  Similarity=0.472  Sum_probs=51.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ...++|+|+|.+ .++++|+|++||+|.|++..+++| |.++..+|+.|+||++||++
T Consensus        20 ~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~g~~G~~P~~yv~~   75 (77)
T 1awj_A           20 ETLVIALYDYQT-NDPQELALRCDEEYYLLDSSEIHW-WRVQDKNGHEGYAPSSYLVE   75 (77)
T ss_dssp             SSCCCCCCCBCC-CCTTSCCBCSSSCCSCCCTTSSSB-CCCCCSSSCCCCCBSTTCCC
T ss_pred             ceEEEECccCCC-CCcCCcCCCCCCEEEEEEecCCCC-EEEEECCCCEEEEehHHEEE
Confidence            457899999999 899999999999999999988999 98886689999999999975

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=99.33  E-value=1.3e-12  Score=86.60  Aligned_cols=58  Identities=26%  Similarity=0.399  Sum_probs=49.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec---------------cCCCeeEEEecC-CCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE---------------LGDGWLWVTAHR-TGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~---------------~~~~w~w~~~~~-~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ ..+++|+|.+||+|.|+.+               .+.+| |.++.. +|+.|+||++||+.+.
T Consensus         5 ~~~~~Alydy~~-~~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW-~~g~~~~~g~~G~fP~~yV~~~~   78 (83)
T 3i5r_A            5 GYQYRALYDYKK-EREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGW-LNGYNETTGERGDFPGTYVEYIG   78 (83)
T ss_dssp             EEEEEECSCBCC-CSTTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCE-EEEEETTTTEEEEEEGGGEEEEE
T ss_pred             CcEEEEccccCC-CCCCccccCCCCEEEEeeccccccccccccccCCCCCcc-EEEEeCCCCCEEEEehHHEEECC
Confidence            457899999999 8999999999999999964               24489 888654 6999999999999874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.31  E-value=7.4e-13  Score=112.08  Aligned_cols=94  Identities=20%  Similarity=0.211  Sum_probs=65.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCccc----ceeeCCccccCCCcee
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE----GHTLGFPVTRINLGIF   76 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~~----~~~L~~p~~~~~~~~~   76 (235)
                      +||||+|++.+ .|+|||+.++.|+||+|.+.++.|..++..|+|+++||+||+.++...    ...+..|+++  +.|+
T Consensus        34 ~flvR~s~~~~-~~~lsv~~~~~~~h~~i~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~~~~~~~~~~--~~~~  110 (377)
T 3cbl_A           34 DFLVRESQGKQ-EYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPK--DKWV  110 (377)
T ss_dssp             EEEEEECC--C-CEEEEC-----CCEEEC----CCCCC----CCSHHHHHHHHHHHTCCC-----CCCCEECCC--CTTB
T ss_pred             CEEEEEeCCCC-cEEEEEEECCCccchhhccccceEEecceeccchHHHHHHHhhccCCcccccCcccccCccc--cccE
Confidence            59999999877 999999999999999998876667778889999999999999866543    2344555654  8999


Q ss_pred             ecceEEEEEeecCeeEeeeEE
Q psy13524         77 IPSAIFRVTAVCGDFYIGGRQ   97 (235)
Q Consensus        77 l~~~~~~l~~~~g~~~~g~~~   97 (235)
                      +.+.++.+.+.+|.|.+|.+.
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~  131 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVF  131 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEE
T ss_pred             EchHHeEEeeEeccCCCCeEE
Confidence            999999999999998888553

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.29  E-value=1.3e-11  Score=79.04  Aligned_cols=45  Identities=22%  Similarity=0.283  Sum_probs=39.0

Q ss_pred             CCCCcccCCCCEEEEeec-cCCCeeEEEe-cCCCceeEEeCCcEEecc
Q psy13524        147 DTDELTFQKGDIFFVHNE-LGDGWLWVTA-HRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       147 ~~~eL~~~~gd~i~v~~~-~~~~w~w~~~-~~~~~~G~~P~~~v~~~~  192 (235)
                      ++++|+|++||+|.|+++ .+.+| |.++ ..+|+.|+||++||+++.
T Consensus        23 ~~~eLsf~~Gd~i~v~~~~~~~~W-w~g~~~~~g~~G~fP~~yv~~~~   69 (70)
T 1gcq_C           23 FGPFLRLNPGDIVELTKAEAEHNW-WEGRNTATNEVGWFPCNRVHPYV   69 (70)
T ss_dssp             CSCBCCBCTTCEEEEEECCTTCSE-EEEEETTTTEEEEEEGGGEEECC
T ss_pred             CCCcCCcCCCCEEEEEeCCCCCCC-eEEEeCCCCCEeEeehHHeEECC
Confidence            345999999999999998 58899 9996 458999999999999763

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.28  E-value=1.1e-11  Score=81.12  Aligned_cols=54  Identities=20%  Similarity=0.257  Sum_probs=43.8

Q ss_pred             EEeeccCCCC---CCCCcccCCCCEEEEeecc-CCCeeEEEec-CCCceeEEeCCcEEecc
Q psy13524        137 VAILPYTKMP---DTDELTFQKGDIFFVHNEL-GDGWLWVTAH-RTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       137 ~a~~~~~~~~---~~~eL~~~~gd~i~v~~~~-~~~w~w~~~~-~~~~~G~~P~~~v~~~~  192 (235)
                      .++++|.+ .   .+++|+|++||+|.|+.+. +.+| |.++. .+|+.|+||++||+++.
T Consensus        19 ~a~~~~~~-~~~~~~~eLsf~~Gd~i~v~~~~~~~gW-w~g~~~~~g~~G~fP~nyV~~~~   77 (78)
T 1k1z_A           19 QEYYGIPP-PPGAFGGFLRLNPGDIVELTKAEAEHNW-WEGRNTATNEVGWFPCNRVHPYV   77 (78)
T ss_dssp             SCBSSCSC-CSSSSCCCCCBCTTCEEEEEECCSSCSC-EEEEETTTTEEEEECSTTEEESC
T ss_pred             EECCCCCC-CCCCCCCccCCCCCCEEEEEEcCCCCCe-EEEEECCCCCEEEEehHHeEECC
Confidence            34455554 2   2489999999999999995 8999 99985 58999999999999753

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.28  E-value=2.5e-13  Score=87.38  Aligned_cols=57  Identities=26%  Similarity=0.457  Sum_probs=51.0

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCcee-EEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQG-MIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G-~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ ..+++|+|++||+|.|+.+.+++| |.++. +++.| +||++||+.+..
T Consensus         7 ~~~~al~dy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~gG~~P~~yv~~~~~   64 (71)
T 1hsq_A            7 CAVKALFDYKA-QREDELTFIKSAIIQNVEKQEGGW-WRGDY-GGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SCCCCSSCCCC-SSSSSCCCCTTCCCBSCCCBTTTE-ECCBC-SSSCSCCEETTTCCSCSC
T ss_pred             eEEEECCCCCc-CCCCccCCCCCCEEEEEEecCCCE-EEEEE-CCeEEeEEChHHcEECCC
Confidence            46789999999 899999999999999999989999 99998 66776 999999998753

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.28  E-value=3.3e-15  Score=121.49  Aligned_cols=95  Identities=21%  Similarity=0.260  Sum_probs=60.4

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEE---eeccCCC-------------eeEEEec-CCCceeEEeC--CcEEe----
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFV---HNELGDG-------------WLWVTAH-RTGEQGMIFR--DLVED----  190 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v---~~~~~~~-------------w~w~~~~-~~~~~G~~P~--~~v~~----  190 (235)
                      .+++|+|+|.+ ....+|+|++||.+.|   +...+++             | |.++. ..+..+.+|.  +++.+    
T Consensus       104 ~rl~aL~~~~~-~~~~eLsf~kgd~~~ier~ln~~~pdw~~l~k~rd~~~~w-l~~~gl~~~~~~~~~~~~~~~~~~~~l  181 (302)
T 2y3a_B          104 SRIAEIHESRT-KLEQDLRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVW-LTQKGARQRKINEWLGIKNETEDQYSL  181 (302)
T ss_dssp             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCSC-C--------------------------
T ss_pred             HHHHHHHhhhh-cchhhhhhhhhHHHhHHhhhccCChHHHHHhhcccchhHH-HHhcCCCcccccccccccCCCCCcccc
Confidence            46789999999 7889999999999998   3333333             4 55543 2455554442  44432    


Q ss_pred             --ccCCCCCCCcCccccCCCChHHHHHhhccCCCeeEEeecc
Q psy13524        191 --LDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISES  230 (235)
Q Consensus       191 --~~~~~~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s  230 (235)
                        ..+++.+++..+||||.|+|.+||++|.+..+|+||||+|
T Consensus       182 ~~~~~~~~~l~~~~WyhG~IsR~eAE~lL~~~~~GtFLVR~S  223 (302)
T 2y3a_B          182 MEDEDALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRES  223 (302)
T ss_dssp             ------CGGGSSTTTBCCSCCHHHHHHHHTTSCTTBEEBCCC
T ss_pred             cccccccccccCCCccCCCCCHHHHHHHhcCCCCCcEEEEec
Confidence              1123445677999999999999999998777999999999

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.28  E-value=6.2e-12  Score=88.94  Aligned_cols=57  Identities=18%  Similarity=0.311  Sum_probs=50.3

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|+++. ++| |.++..  +|+.|+||++||+.+
T Consensus        58 ~~~~~~Alydy~a-~~~~eLsf~~Gd~i~vl~~~-~gW-w~g~~~~~~g~~G~fP~nyV~~~  116 (119)
T 2rqr_A           58 KERHGVAIYNFQG-SGAPQLSLQIGDVVRIQETC-GDW-YRGYLIKHKMLQGIFPKSFIHIK  116 (119)
T ss_dssp             CCEEEEBCSCBCC-CSTTBCCBCTTCEEEEEEEE-TTE-EEEEESSCTTCEEEEEGGGBCCC
T ss_pred             CceEEEEccccCC-CCCCcccCcCCCEEEEEEcC-CCE-EEEEECCCCCCEEEeChhHEEEe
Confidence            3467999999999 89999999999999999985 699 988874  689999999999754

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.25  E-value=8.1e-12  Score=96.52  Aligned_cols=57  Identities=28%  Similarity=0.503  Sum_probs=50.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEee-----ccCCCeeEEEecC---------CCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHN-----ELGDGWLWVTAHR---------TGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~-----~~~~~w~w~~~~~---------~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ...+||+|++||+|.|+.     ..+.|| |.|+..         +|+.|+||++||+.+
T Consensus       142 ~~~~rALYdY~a-~~~dELSf~~GDiI~Vl~~~~~~~~ddgW-w~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          142 MFKVQAQHDYTA-TDTDELQLKAGDVVLVIPFQNPEEQDEGW-LMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             CEEEEESSCBCC-CSTTCCCBCSSCEEEECCCSCGGGSCTTE-EEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             ceEEEECCCcCC-CCCCcCCcCCCCEEEEeecCCCCccCCCe-eEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            457999999999 889999999999999999     678999 988852         489999999999875

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=99.23  E-value=1.4e-11  Score=100.35  Aligned_cols=58  Identities=28%  Similarity=0.562  Sum_probs=53.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      +..++|+|||.+ .++++|+|.+||+|.|++..++|| |.|+. +|+.|+||++||+.+.+
T Consensus         2 ~~~~~a~~~~~~-~~~~el~~~~gd~i~v~~~~~~~w-~~~~~-~g~~G~~P~~~v~~~~~   59 (283)
T 3jv3_A            2 SCQVIGMYDYTA-QNDDELAFSKGQIINVLNKEDPDW-WKGEV-SGQVGLFPSNYVKLTTD   59 (283)
T ss_dssp             CEEEEESSCBCC-SSTTBCCBCTTCEEEEEECCSTTE-EEEEE-TTEEEEEEGGGEEEGGG
T ss_pred             CeEEEEccccCC-CCCCcCCCCCCCEEEEEecCCCCE-EEEEE-CCCCCcCCCccccccCc
Confidence            357899999999 899999999999999999999999 99987 89999999999998764

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.22  E-value=6.3e-12  Score=112.36  Aligned_cols=70  Identities=27%  Similarity=0.431  Sum_probs=60.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECC---------EEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc----ccceeeCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINN---------QIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI----VEGHTLGF   66 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~---------~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~----~~~~~L~~   66 (235)
                      +||||+|++.+|.|+|||++++         .|+||+|...+++| +.+...|+||.+||+||+++++    +..+.|..
T Consensus       132 ~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~l~~~~g~~~~L~~  211 (595)
T 3ps5_A          132 TFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQ  211 (595)
T ss_dssp             EEEEEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBCGGGCBBSSSSCCBSSHHHHHHHHHHSCBCCTTSCCBCCCE
T ss_pred             eEEEEecCCCCCcEEEEEEECCccccccCCCceEEEEEEEeCCEEEEcCCcCCCCHHHHHHHHhcCCccccCCcEEEeec
Confidence            5999999999999999999988         89999998766566 6666899999999999999664    45678898


Q ss_pred             cccc
Q psy13524         67 PVTR   70 (235)
Q Consensus        67 p~~~   70 (235)
                      |+..
T Consensus       212 p~~~  215 (595)
T 3ps5_A          212 PYYA  215 (595)
T ss_dssp             ECCC
T ss_pred             cccc
Confidence            9864

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.20  E-value=3.4e-11  Score=106.16  Aligned_cols=71  Identities=28%  Similarity=0.563  Sum_probs=62.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECC----------EEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc----ccceeeC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINN----------QIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI----VEGHTLG   65 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~----------~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~----~~~~~L~   65 (235)
                      +||||+|++.+|.|+||++.++          .|+||+|...+++| +.+...|.||.+||+||+.+++    +..+.|.
T Consensus       134 ~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~~g~~~l~~~~~F~sL~eLV~~y~~~~l~~~~g~~~~L~  213 (525)
T 2shp_A          134 SFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLK  213 (525)
T ss_dssp             EEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCCBCTTSCBCCCC
T ss_pred             eEEEEecCCCCCCEEEEEEECCccccccccccceEEEEEEecCCeEEECCCceeCcHHHHHHhhhccCccccCCeEEEee
Confidence            5999999999999999999987          89999999887777 5557799999999999999885    5578999


Q ss_pred             CccccC
Q psy13524         66 FPVTRI   71 (235)
Q Consensus        66 ~p~~~~   71 (235)
                      +|+.+.
T Consensus       214 ~P~~~t  219 (525)
T 2shp_A          214 QPLNTT  219 (525)
T ss_dssp             EECCCS
T ss_pred             cccccc
Confidence            998763

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.20  E-value=5.9e-12  Score=89.47  Aligned_cols=47  Identities=21%  Similarity=0.200  Sum_probs=39.1

Q ss_pred             EeCCcEEeccCCCCCCCcCccccCCCChHHHHHhhccC--CCeeEEeeccCCC
Q psy13524        183 IFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKA--GPVNFTISESDST  233 (235)
Q Consensus       183 ~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~ae~~l~~~--~~g~fliR~s~~~  233 (235)
                      .|+|||.+.. +   ++..+||||.|+|++||++|.+.  .+|+||||+|++.
T Consensus         2 ~psnyv~~~~-~---l~~~~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~   50 (121)
T 2dly_A            2 SSGSSGAEDR-S---LQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQ   50 (121)
T ss_dssp             CSCCCCCSSG-G---GGGCSSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSS
T ss_pred             CCcccccccc-c---cCcCCccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCC
Confidence            4899997642 2   55689999999999999999875  4899999999864

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.19  E-value=6e-11  Score=91.19  Aligned_cols=59  Identities=27%  Similarity=0.463  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|+...++|| |.++. +|+.|+||++||+.+.+
T Consensus        80 ~~~~~~al~dy~a-~~~~eLs~~~Gd~i~vl~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~  138 (193)
T 1ng2_A           80 AGEPYVAIKAYTA-VEGDEVSLLEGEAVEVIHKLLDGW-WVIRK-DDVTGYFPSMYLQKSGQ  138 (193)
T ss_dssp             TCEEEEESSCBCC-CSTTBCCBCTTCEEEEEECCTTSE-EEEEE-TTEEEEEEGGGEEETTS
T ss_pred             cceeeeeccccCC-CCCCcccccCCCEEEEEEecCCCe-EEEEE-CCCEEEEehHHeEECCC
Confidence            4567899999999 889999999999999999989999 99997 99999999999998754

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=99.16  E-value=5.9e-11  Score=103.83  Aligned_cols=69  Identities=20%  Similarity=0.276  Sum_probs=59.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEeccCCCCCCCcCccccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDLDETIDPNTVFDWFHP  206 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~~~~p~~~~~w~~~  206 (235)
                      ....++|+|+|.+ ++++||+|++||+|.|++..++|| |.|+. .+|+.|+||+|||+++..    .+..+||.+
T Consensus       441 ~~~~~~aly~y~a-~~~dELs~~~GD~i~v~~~~~~gW-~~G~~~~~g~~G~fPsnyV~~~~~----~~~~p~y~~  510 (526)
T 2de0_X          441 NAHNQIAIYAHQP-RTADEIPMEPGDIIGVAGNHWDGY-SKGVNRKLGRTGLYPSYKVREKIE----TVKYPTYPE  510 (526)
T ss_dssp             CCCEEEECSCBCC-SSTTBCCBCTTCEEEEEEECSSSE-EEEEETTTTEEEEEEGGGEEECCC----EECCCCCCC
T ss_pred             cccceEEeecCCC-CCCCcCCcCCCCEEEEccccCCCe-eEEEeCCCCCEEEECchheeEccc----CCCCCChhh
Confidence            3467999999999 899999999999999999999999 99984 489999999999998753    234789964

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.15  E-value=9.9e-11  Score=73.20  Aligned_cols=45  Identities=31%  Similarity=0.606  Sum_probs=40.9

Q ss_pred             CCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       147 ~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      +++||+|++||+|.|+...+++| |.++. +|+.|+||++||+.+..
T Consensus         2 ~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   46 (63)
T 1tuc_A            2 GPREVTMKKGDILTLLNSTNKDW-WKVEV-NDRQGFVPAAYVKKLDS   46 (63)
T ss_dssp             CCCCCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEECSC
T ss_pred             CccccCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEEeHHHEEEcCC
Confidence            46899999999999999989999 99986 99999999999998754

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.11  E-value=4.1e-11  Score=82.19  Aligned_cols=36  Identities=25%  Similarity=0.413  Sum_probs=32.7

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.++|+||||+|++.
T Consensus         6 l~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~   41 (100)
T 1r1p_A            6 IEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSS   41 (100)
T ss_dssp             CTTTTTSCTTCCHHHHHHHHHTSCTTBEEEEECSSS
T ss_pred             eccCCccccCCCHHHHHHHhcCCCCCEEEEEecCCC
Confidence            445899999999999999999989999999999874

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.11  E-value=1.3e-10  Score=96.98  Aligned_cols=59  Identities=24%  Similarity=0.470  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ .++++|+|++||+|.|+++.++|| |.++. +|+.|+||++||+.+..
T Consensus       173 ~~~~~~alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~  231 (341)
T 2dyb_A          173 AAPRAEALFDFTG-NSKLELNFKAGDVIFLLSRINKDW-LEGTV-RGATGIFPLSFVKILKD  231 (341)
T ss_dssp             CCCEEEESSCBCC-SSSSBCCBCTTCEEEEEEECSSSE-EEEEE-TTEEEEEEGGGEEEEEC
T ss_pred             CCcEEEEEEeeCC-CCCCcCCccCCCEEEEEEecCCCE-EEEEE-CCcEEEechHHeEEcCC
Confidence            3567999999999 899999999999999999999999 99997 99999999999998753

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.10  E-value=5.7e-11  Score=104.91  Aligned_cols=79  Identities=24%  Similarity=0.331  Sum_probs=64.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECC---------EEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCC----cccceeeCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINN---------QIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQ----IVEGHTLGF   66 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~---------~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~----~~~~~~L~~   66 (235)
                      +||||+|++.+|.|+|||+..+         .|+||+|...++.| +.....|.||.+||+||++++    .+..+.|.+
T Consensus       132 ~FLVR~S~~~~g~y~Lsv~~~~~~~~~~~~~~v~h~~I~~~~g~~~l~~~~~F~sl~eLV~~y~~~~l~~~~g~~~~L~~  211 (532)
T 2b3o_A          132 TFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQ  211 (532)
T ss_dssp             EEEEEECSSSTTCEEEEEEEEEEC----CCEEEEEEEEBCCTTSBBSSSSCCBSSHHHHHHHHHHHCEECSSSCEECCCE
T ss_pred             eEEEecCCCCCCceEEEEEecCccccccCCCceEEEEEEEcCCceeeCCCcccCcHHHHHhhccccCccccCCeeEeccc
Confidence            5999999999999999999877         89999998876666 445779999999999999875    466789999


Q ss_pred             ccccC-CCceeecc
Q psy13524         67 PVTRI-NLGIFIPS   79 (235)
Q Consensus        67 p~~~~-~~~~~l~~   79 (235)
                      |+.+. .+.+.+..
T Consensus       212 P~~~t~i~~~~l~~  225 (532)
T 2b3o_A          212 PYYATRVNAADIEN  225 (532)
T ss_dssp             ECCCCCCCCGGGTC
T ss_pred             ccccccchhhHHHH
Confidence            99874 23344433

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.10  E-value=3.6e-11  Score=87.33  Aligned_cols=35  Identities=14%  Similarity=0.294  Sum_probs=32.0

Q ss_pred             CcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus        24 ~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~   58 (138)
T 2crh_A           24 SVHLWYAGPMERAGAESILANRSDGTFLVRQRVKD   58 (138)
T ss_dssp             GGSSSBCCSCCHHHHHHHTTTSCTTEEEEECCSST
T ss_pred             CcCCcccCCCCHHHHHHHhcCCCCCEEEEEECCCC
Confidence            44799999999999999999988999999999874

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.08  E-value=5.4e-11  Score=91.46  Aligned_cols=59  Identities=27%  Similarity=0.491  Sum_probs=53.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|+...+.|| |.++. +|+.||||++||+.+..
T Consensus        10 ~~~~~~al~dy~~-~~~~eLs~~~Gd~i~vl~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~   68 (193)
T 1ng2_A           10 ILQTYRAIADYEK-TSGSEMALSTGDVVEVVEKSESGW-WFCQM-KAKRGWIPASFLEPLDS   68 (193)
T ss_dssp             CCEEEECSSCBCC-SSTTCCCBCTTCEEEEEECCTTSC-CEEEE-CCCCCCCCGGGCCCSSC
T ss_pred             cCcEEEEcCCcCC-CCCCcCCCCCCCEEEEEEecCCCe-EEEEE-CCeeeEechheEEeecc
Confidence            3467899999999 899999999999999999989999 99986 99999999999998754

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=99.08  E-value=6.4e-10  Score=83.59  Aligned_cols=105  Identities=20%  Similarity=0.334  Sum_probs=74.5

Q ss_pred             CeEEeecCCCCCCEEEEEEE-CCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcccce-----------------
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-NNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGH-----------------   62 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~~~~-----------------   62 (235)
                      .||||.|++ ++.++|+++. ++.++|++|...+..|..++..|++|.|||.+|.+ ++...+                 
T Consensus        35 ~~liRPSsk-~~~ltit~Kv~d~~~~Hi~I~E~~k~l~ig~~~fedLDElI~~yv~-pm~~~~~~~~~h~kf~~s~~~~e  112 (178)
T 2xp1_A           35 DFLIRKGSR-HGYCVLVIKFASDVFVHMKIEEHSEHYTCSNKHFEDIDEVISVYVR-PILRNLKSIKAHAKYFNSPEDAE  112 (178)
T ss_dssp             CEEEEECSS-TTEEEEEEEEETTEEEEEEEEECSSCEEETTEEESSHHHHHHHTHH-HHHHHHHHHHHSTTBCSCTTTSH
T ss_pred             CEEEeecCC-CCcEEEEEEECCCcEEEEEEEECCCEEEECCcEECCHHHHHHHHHH-HHHHHHHHHHhCCccCCCHHHHH
Confidence            599999997 7889999995 88999999987766688898999999999999965 221100                 


Q ss_pred             -eeC--Cccc--------cCCCceeec--------ceEEEEEeecCeeEeeeEEEcchhhhhhcccc
Q psy13524         63 -TLG--FPVT--------RINLGIFIP--------SAIFRVTAVCGDFYIGGRQFDSLSDLISYYSS  110 (235)
Q Consensus        63 -~L~--~p~~--------~~~~~~~l~--------~~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~  110 (235)
                       .|.  .|-.        +..+|+++.        +.++++.  .| +.+++..|+++.+|+++|+.
T Consensus       113 ~~L~~~~p~~~~Y~f~~s~~~PG~f~l~~~~~~~~~e~i~V~--~g-~~~~~~~f~sl~~L~~~fK~  176 (178)
T 2xp1_A          113 KLLSSFDGSKVVYAFYFSRKYPGKLTFAYNNGSILEEYIGVS--DM-LTYNNSTFKDIDSFVAYRKR  176 (178)
T ss_dssp             HHHHTCCSSSCEEEEEECSSSTTEEEEEEESSSEEEEEEEES--SS-EEETTEEESSHHHHHHHHHC
T ss_pred             HHHHHhCCCCceEEEEecCCCCCeEEEEEcCCCCceeeEEEc--cC-CEEcCcCCcCHHHHHHHHhh
Confidence             000  1110        013554432        2445555  23 66789999999999999875

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=3.5e-11  Score=85.20  Aligned_cols=45  Identities=18%  Similarity=0.273  Sum_probs=37.1

Q ss_pred             CCcEEeccCCCCCCCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        185 RDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       185 ~~~v~~~~~~~~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      .++|.+.    +.++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         4 ~~~vap~----~~l~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~   48 (119)
T 2ecd_A            4 GSSGTPV----NSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESS   48 (119)
T ss_dssp             CCCCCSS----CCCCCSSSEEEECCHHHHHHHHHTSCTTBEEEEEESSS
T ss_pred             Ccccccc----cccccCccccCCCCHHHHHHHhcCCCCCeEEEEeCCCC
Confidence            4556543    33667899999999999999998877999999999864

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=99.08  E-value=1.7e-10  Score=74.60  Aligned_cols=54  Identities=15%  Similarity=0.321  Sum_probs=46.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc--CCCeeEEEecC---CCceeEEeCCcE
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL--GDGWLWVTAHR---TGEQGMIFRDLV  188 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~w~~~~~---~~~~G~~P~~~v  188 (235)
                      ...++|+|+|.+ ....||+|++||++.|++..  +++| |.++..   .++.|++|+||+
T Consensus        17 ~e~~valydF~A-r~~~ELS~~kGd~vevle~~~~~peW-~lvr~~~~~~~qeGlVPsnyl   75 (82)
T 1u3o_A           17 CELTVVLQDFSA-AHSSELSIQVGQTVELLERPSERPGW-CLVRTTERSPPQEGLVPSSTL   75 (82)
T ss_dssp             CEEEECSSCBCC-CSTTCCCBCTTCEEEESSCTTSSTTE-EEEEESSSSSCEEEEEEGGGS
T ss_pred             ceEEEEEeeecC-CCCCeeeEcCCCEEEEEecCCCCCCE-EEEEECCCCCCcEeeccccEE
Confidence            356899999999 79999999999999999976  4899 888863   447899999998

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=99.08  E-value=2e-10  Score=87.50  Aligned_cols=59  Identities=19%  Similarity=0.342  Sum_probs=51.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|++..+ +| |.++..  +|+.|+||++||+....
T Consensus        16 ~~~~~~Alydf~~-~~~~eLs~~~Gd~i~v~~~~~-~W-~~g~~~~~~g~~G~fP~nyV~~~~~   76 (184)
T 3a98_A           16 KERHGVAIYNFQG-SGAPQLSLQIGDVVRIQETCG-DW-YRGYLIKHKMLQGIFPKSFIHIKEV   76 (184)
T ss_dssp             SCCEEEESSCBCC-SSTTBCCBCTTCEEEEEEEET-TE-EEEEETTEEEEEEEEEGGGEEEECC
T ss_pred             CceEEEEeeeeCC-CCCCCCCcCCCCEEEEEecCC-CE-EEEEEecCCCceEEECcceEEEecc
Confidence            3468999999999 899999999999999999866 59 999863  57899999999998754

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.07  E-value=8.8e-11  Score=80.23  Aligned_cols=35  Identities=26%  Similarity=0.452  Sum_probs=31.8

Q ss_pred             CcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         3 ~~~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~   37 (98)
T 3us4_A            3 SLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARH   37 (98)
T ss_dssp             TTCTTBCCSCCHHHHHHHTCSCCTTCEEEEECSSS
T ss_pred             ccCcccCCCCCHHHHHHHccCCCCcEEEEEeCCCC
Confidence            45899999999999999999877999999999774

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.06  E-value=3.5e-11  Score=84.53  Aligned_cols=46  Identities=22%  Similarity=0.378  Sum_probs=37.1

Q ss_pred             CceeEEeCCcEEeccCCCCCCCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        178 GEQGMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       178 ~~~G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      |+.|++|...        .+++..+||||.|+|++||++|.  .+|+||||+|++.
T Consensus         1 ~~~g~vp~~~--------~~l~~~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~   46 (114)
T 1wqu_A            1 GSSGSSGEVQ--------KPLHEQLWYHGAIPRAEVAELLV--HSGDFLVRESQGK   46 (114)
T ss_dssp             CCCCCCCGGG--------SCGGGCTTEEESCCHHHHHTTCC--STTEEEEEECSSS
T ss_pred             CCccccCCcc--------cccccCCcEeeCCCHHHHHHHhc--cCCeEEEEEcCCC
Confidence            4567776642        23556899999999999999997  4899999999874

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.06  E-value=1e-11  Score=107.78  Aligned_cols=62  Identities=15%  Similarity=0.142  Sum_probs=48.2

Q ss_pred             cCCCeeEEEecC-CCceeEEeCCcEEeccCCCCCCCcCccc-----cCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        165 LGDGWLWVTAHR-TGEQGMIFRDLVEDLDETIDPNTVFDWF-----HPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       165 ~~~~w~w~~~~~-~~~~G~~P~~~v~~~~~~~~p~~~~~w~-----~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      .+++| |.++.. .++.|++|++||.+.+     ++..+||     ||.|+|++||++|.+ .+|+||||+|++.
T Consensus        15 ~~~~w-w~~~~~~~~~~g~~P~~~v~~~~-----~~~~~wy~~~w~hg~i~r~~ae~lL~~-~~G~FLvR~S~~~   82 (463)
T 3cxl_A           15 YFQGV-WKSYLYQLQQEAPHPRRITCTCE-----VENRPKYYGREFHGMISREAADQLLIV-AEGSYLIRESQRQ   82 (463)
T ss_dssp             ---CC-SCCHHHHHHHHSCCCEECCCCCC-----CTTCCTTCCTTBCCSCCHHHHHHHHTT-STTEEEEEECSSS
T ss_pred             CCCCE-EEEEecCcCccCCCCcCccCCcc-----ccCCCCccccccccCCCHHHHHHHHcC-CCCeEEEeccCCC
Confidence            36789 888764 4678999999997543     3445666     999999999999975 5899999999875

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.06  E-value=9.2e-11  Score=81.20  Aligned_cols=36  Identities=19%  Similarity=0.479  Sum_probs=32.2

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      |+..+||||.|+|++||++|.+.+  +|+||||+|++.
T Consensus         2 h~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~   39 (105)
T 1nrv_A            2 HRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSN   39 (105)
T ss_dssp             CTTSTTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSC
T ss_pred             CccCcccCCCCCHHHHHHHHHhcCCCCceEEEEeCCCC
Confidence            456899999999999999999764  999999999874

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.04  E-value=1.1e-10  Score=79.37  Aligned_cols=33  Identities=33%  Similarity=0.535  Sum_probs=31.0

Q ss_pred             CccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      .+||||.|+|++||++|.+.+ +|+||||+|++.
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~   36 (96)
T 1jyr_A            3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA   36 (96)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSS
T ss_pred             cceeccCCCHHHHHHHHhcCCCCcEEEEEecCCC
Confidence            689999999999999999988 999999999874

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.04  E-value=1e-10  Score=81.86  Aligned_cols=36  Identities=22%  Similarity=0.274  Sum_probs=32.6

Q ss_pred             CCCCCcCccccCCCChHHHHHhhccCCCeeEEeecc
Q psy13524        195 IDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISES  230 (235)
Q Consensus       195 ~~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s  230 (235)
                      ++.++..+||||.|+|++||++|.+..+|+||||+|
T Consensus         4 ~~~~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S   39 (112)
T 1h9o_A            4 IPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRES   39 (112)
T ss_dssp             CGGGSGGGTBCCSCCHHHHHHHHTTCCTTEEEEEEC
T ss_pred             CccccCCCcccCCCCHHHHHHHhcCCCCceEEEeec
Confidence            445678999999999999999999777999999999

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.03  E-value=1.4e-10  Score=80.44  Aligned_cols=36  Identities=25%  Similarity=0.426  Sum_probs=32.5

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         5 L~~~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~   40 (106)
T 3eaz_A            5 LSLMPWFHGKITREQAERLLYPPETGLFLVRESTNY   40 (106)
T ss_dssp             GGGCTTBCCSCCHHHHHHHTCSCCTTEEEEEECTTS
T ss_pred             cccCCCcCCCCCHHHHHHHhCCCCCCEEEEEECCCC
Confidence            456899999999999999999878999999999864

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.03  E-value=1.1e-10  Score=80.58  Aligned_cols=35  Identities=11%  Similarity=0.274  Sum_probs=31.0

Q ss_pred             CcCccccCCCChHHHHHhhccC-CCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKA-GPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~-~~g~fliR~s~~~  233 (235)
                      +..+||||.|+|++||++|.+. .+|+||||+|++.
T Consensus         2 ~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~   37 (104)
T 1d4t_A            2 DAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESV   37 (104)
T ss_dssp             TTCTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSS
T ss_pred             CCCceEccCCCHHHHHHHHHhcCCCCEEEEeeCCCC
Confidence            3479999999999999999866 5999999999864

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=1.7e-10  Score=81.64  Aligned_cols=39  Identities=33%  Similarity=0.601  Sum_probs=34.3

Q ss_pred             CCCCCcCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        195 IDPNTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       195 ~~p~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      .++++..+||||.|+|++||++|++.+ +|+||||+|++.
T Consensus        10 ~~~l~~~~WyhG~isR~~Ae~lL~~~g~~G~FLVR~S~~~   49 (119)
T 2gsb_A           10 EDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT   49 (119)
T ss_dssp             CCSGGGCSSBCCSSCHHHHHHHHHHTCCSSEEEEEECSSS
T ss_pred             CcccccCCcccCCCCHHHHHHHHhhcCCCCeEEEEeCCCC
Confidence            345678999999999999999999874 999999999874

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.02  E-value=9.4e-11  Score=82.79  Aligned_cols=36  Identities=11%  Similarity=-0.046  Sum_probs=32.0

Q ss_pred             CCcCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      .+..+||||.|+|++||++|.+.+ +|+||||+|++.
T Consensus        18 ~~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~   54 (118)
T 2el8_A           18 ALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDG   54 (118)
T ss_dssp             CSSSCTTCCCCCHHHHHHHHHHSSTTCSBEEEECCSS
T ss_pred             ccCCCceecCCCHHHHHHHHhhCCCCcEEEEeeCCCC
Confidence            456899999999999999998654 999999999875

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.02  E-value=1.4e-10  Score=81.43  Aligned_cols=36  Identities=31%  Similarity=0.445  Sum_probs=32.0

Q ss_pred             CCcCccccCCCChHHHHHhhccC--CCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKA--GPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~--~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.  .+|+||||+|++.
T Consensus         9 l~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~   46 (114)
T 1blj_A            9 LEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESN   46 (114)
T ss_dssp             SCCSSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTC
T ss_pred             cccCCccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCC
Confidence            56689999999999999999864  4999999999874

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.02  E-value=1.2e-10  Score=95.78  Aligned_cols=57  Identities=21%  Similarity=0.217  Sum_probs=52.0

Q ss_pred             cEEEEeeccC--CCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYT--KMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~--~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.  + .+++||+|++||+|.|+.+.++|| |.++. +|+.|+||++||+.+..
T Consensus       238 ~~~~al~d~~~~a-~~~~eL~~~~Gd~i~v~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~~  296 (304)
T 2eyz_A          238 IYARVIQKRVPNA-YDKTALALEVGELVKVTKINVSGQ-WEGEC-NGKRGHFPFTHVRLLDQ  296 (304)
T ss_dssp             CCSCCSSCBCCCT-TCSSCCCBCTTSCCEEEEECTTSC-EEEEE-TTEEEECCCTTSCCCSS
T ss_pred             EEEEEeeeecCCC-CCCCeecccCCCEEEEEEecCCCe-EEEEE-CCceEEechHHEEECCC
Confidence            4689999999  5 588999999999999999999999 99998 89999999999998764

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=99.02  E-value=6.2e-10  Score=96.77  Aligned_cols=58  Identities=21%  Similarity=0.283  Sum_probs=53.6

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ .++++|+|.+||+|.|++..++|| |.|+. +|+.|+||++||+.+..
T Consensus        30 ~~~~~al~~~~~-~~~~eL~~~~gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   87 (466)
T 2pz1_A           30 VVCAEALWDHVT-MDDQELGFKAGDVIEVMDATNREW-WWGRV-ADGEGWFPASFVRLRVN   87 (466)
T ss_dssp             CEEEEESSCBCC-CCTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEECSC
T ss_pred             ccEEEEccccCC-CCCCcCCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEEehhHeeeccC
Confidence            467999999999 899999999999999999999999 99998 89999999999998754

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.00  E-value=2.3e-10  Score=79.20  Aligned_cols=35  Identities=31%  Similarity=0.440  Sum_probs=30.7

Q ss_pred             CcCccccCCCChHHHHHhhccC--CCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKA--GPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~--~~g~fliR~s~~~  233 (235)
                      +..+||||.|+|++||++|.+.  .+|+||||+|++.
T Consensus         2 ~~~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~   38 (105)
T 1lkk_A            2 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESEST   38 (105)
T ss_dssp             CCCTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSS
T ss_pred             CcCceecCCCCHHHHHHHHHhcCCCCceEEEEECCCC
Confidence            3479999999999999999864  4999999999874

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=98.99  E-value=3e-10  Score=80.66  Aligned_cols=37  Identities=16%  Similarity=0.376  Sum_probs=33.3

Q ss_pred             CCCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      .++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus        18 ~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~   54 (122)
T 2lnw_A           18 DYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAE   54 (122)
T ss_dssp             CSTTSTTBCCSCCHHHHHHHHHHSCTTBEEEEECCCS
T ss_pred             CcccCcCCCcCCCHHHHHHHhcCCCCCeEEEEeCCCC
Confidence            3557899999999999999999878999999999864

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=98.99  E-value=1.7e-10  Score=80.78  Aligned_cols=35  Identities=26%  Similarity=0.445  Sum_probs=31.7

Q ss_pred             CcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         3 ~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~   37 (112)
T 3k2m_A            3 EKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESS   37 (112)
T ss_dssp             GGSTTEEESCCHHHHHHHTTTCCTTEEEEEECSSS
T ss_pred             ccCcceeeCCCHHHHHHHhccCCCceEEEEeCCCC
Confidence            45799999999999999998877999999999764

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=98.99  E-value=2.9e-10  Score=80.40  Aligned_cols=36  Identities=31%  Similarity=0.473  Sum_probs=32.8

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus        13 ~~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~   48 (119)
T 2cs0_A           13 DGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSH   48 (119)
T ss_dssp             SSCCSSBCSSCCHHHHHHHHHTSCTTCEEEEECSSS
T ss_pred             ccCCCccccCCCHHHHHHHhcCCCCCEEEEEecCCC
Confidence            566899999999999999998777999999999874

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=98.99  E-value=4.3e-10  Score=97.62  Aligned_cols=56  Identities=27%  Similarity=0.593  Sum_probs=50.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHH-----HhhhCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVIN-----RYRKEQ   57 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~-----~y~~~~   57 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+ ++.|..+...|+||.|||+     +|+...
T Consensus        73 ~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~-~g~~~~~~~~F~sl~~Lv~dGl~~~~~~~~  133 (463)
T 3cxl_A           73 SYLIRESQRQPGTYTLALRFGSQTRNFRLYY-DGKHFVGEKRFESIHDLVTDGLITLYIETK  133 (463)
T ss_dssp             EEEEEECSSSTTCEEEEEECSSSEEEEECEE-SSSEESSSCCBSCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeccCCCCCCEEEEEEECCEEEEEEEec-CCeEEECCCccCCHHHHHHHHHHhhhccCC
Confidence            5999999999999999999999999999987 5557667889999999999     998754

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=98.98  E-value=1.9e-10  Score=79.17  Aligned_cols=35  Identities=23%  Similarity=0.335  Sum_probs=29.6

Q ss_pred             CcCccccCCCChHHHHHhhcc-CCCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVK-AGPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~-~~~g~fliR~s~~~  233 (235)
                      +..+||||.|+|++||++|+. ..+|+||||+|++.
T Consensus         3 ~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~   38 (102)
T 2cia_A            3 LGSEWYYGNVTRHQAECALNERGVEGDFLIRDSESS   38 (102)
T ss_dssp             --CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSS
T ss_pred             cCCccccCCCCHHHHHHHHhhCCCCcEEEEEECCCC
Confidence            347999999999999999964 45999999999874

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=98.98  E-value=2.9e-10  Score=80.18  Aligned_cols=36  Identities=31%  Similarity=0.435  Sum_probs=32.0

Q ss_pred             CCcCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.+ +|+||||+|++.
T Consensus         3 L~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~   39 (117)
T 3ov1_A            3 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA   39 (117)
T ss_dssp             CCCCTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSS
T ss_pred             cccCCcccCCCCHHHHHHHHhCCCCCCcEEEEeCCCC
Confidence            345899999999999999999975 899999999764

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=98.98  E-value=2.2e-10  Score=74.63  Aligned_cols=46  Identities=30%  Similarity=0.576  Sum_probs=41.8

Q ss_pred             CCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        146 PDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       146 ~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      .++++|+|++||+|.|+.+.+.+| |.++. +|+.|+||++||+.+..
T Consensus         3 ~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~~~~   48 (77)
T 2jmc_A            3 MGPREVTMKKGDILTLLNSTNKDW-WKVEV-NDRQGFVPAAYVKKLDS   48 (77)
T ss_dssp             SSSCCCCCCTTCEEECCCCCCSSC-CCEEE-TTEEECCCGGGEEECCC
T ss_pred             cCCCccCCCCCCEEEEEEecCCCE-EEEEE-CCcEEEEEeeEEEEcCC
Confidence            567899999999999999989999 98886 89999999999998753

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=98.98  E-value=2.1e-10  Score=79.93  Aligned_cols=36  Identities=33%  Similarity=0.521  Sum_probs=30.5

Q ss_pred             CCcCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.+ +|+||||+|++.
T Consensus         4 l~~~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~S~~~   40 (109)
T 3tkz_A            4 MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSN   40 (109)
T ss_dssp             ---CCSBCTTCCHHHHHHHHHHHCCTTEEEEEECSSS
T ss_pred             cccCCceecCCCHHHHHHHHhcCCCCCEEEEEecCCC
Confidence            345899999999999999999864 999999999864

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=98.97  E-value=2.8e-10  Score=78.41  Aligned_cols=33  Identities=30%  Similarity=0.461  Sum_probs=29.8

Q ss_pred             CccccCCCChHHHHHhhccC-CCeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKA-GPVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~-~~g~fliR~s~~~  233 (235)
                      .+||||.|+|++||++|.+. .+|+||||+|++.
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~   36 (103)
T 1i3z_A            3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESV   36 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSS
T ss_pred             CccccCCCCHHHHHHHHhhcCCCceEEEEeCCCC
Confidence            68999999999999999875 4999999999874

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=98.97  E-value=2.3e-10  Score=80.76  Aligned_cols=37  Identities=19%  Similarity=0.385  Sum_probs=32.4

Q ss_pred             CCCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      .++..+||||.|+|++||++|.+.+  +|+||||+|++.
T Consensus        10 ~~~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~   48 (117)
T 3pqz_A           10 IHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRN   48 (117)
T ss_dssp             GGGGCTTBCCSCCHHHHHHHHHHTTCCTTEEEEEECCC-
T ss_pred             hcccCccccCCCCHHHHHHHHhcCCCCCCEEEEEecCCC
Confidence            3667899999999999999998754  999999999874

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=98.96  E-value=3.8e-10  Score=78.69  Aligned_cols=35  Identities=17%  Similarity=0.388  Sum_probs=31.8

Q ss_pred             CCCcCccccCCCChHHHHHhhccC-CCeeEEeeccC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKA-GPVNFTISESD  231 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~-~~g~fliR~s~  231 (235)
                      +++..+||||.|+|++||++|.+. .+|+||||+|+
T Consensus         7 ~l~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~   42 (110)
T 2ekx_A            7 GLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSS   42 (110)
T ss_dssp             CTTTSSSBCCSCCHHHHHHHHHHTCCTTEEEEEECS
T ss_pred             cccCCCeecCCCCHHHHHHHHhccCCCceEEEEecC
Confidence            466789999999999999999988 59999999994

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=98.96  E-value=4.2e-10  Score=77.13  Aligned_cols=33  Identities=24%  Similarity=0.347  Sum_probs=30.1

Q ss_pred             CccccCCCChHHHHHhhccC--CCeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKA--GPVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~--~~g~fliR~s~~~  233 (235)
                      .+||||.|+|++||++|.+.  .+|+||||+|++.
T Consensus         2 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~   36 (100)
T 1rja_A            2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKP   36 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSS
T ss_pred             CCcccCCCCHHHHHHHHhccCCCCCEEEEEeCCCC
Confidence            58999999999999999985  4999999999874

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=98.95  E-value=3e-10  Score=78.73  Aligned_cols=36  Identities=25%  Similarity=0.372  Sum_probs=31.3

Q ss_pred             CCcCccccCCCChHHHHHhhccC--CCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKA--GPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~--~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.  .+|+||||+|++.
T Consensus         2 l~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~   39 (106)
T 1aot_F            2 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETT   39 (106)
T ss_dssp             CCSSSSCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSS
T ss_pred             CccCccCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCC
Confidence            34579999999999999999875  3999999999874

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=98.94  E-value=6.5e-11  Score=86.32  Aligned_cols=49  Identities=20%  Similarity=0.277  Sum_probs=36.0

Q ss_pred             eEEeCCcEEeccCCCCCCCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        181 GMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       181 G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +..|.+|+.+..    .++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         8 ~~~~~~~v~~~~----~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~   56 (141)
T 2vif_A            8 PMDVTSLTEELK----KLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDD   56 (141)
T ss_dssp             ------HHHHHH----HHHHHTCBCCSCCHHHHHHHTTTSCTTCEEEEECSST
T ss_pred             CCchhhhhcchh----hhccCCCcccCCCHHHHHHHhcCCCCceEEEEecCCC
Confidence            344667765532    2456899999999999999999888999999999874

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=98.94  E-value=2.5e-10  Score=79.77  Aligned_cols=36  Identities=17%  Similarity=0.420  Sum_probs=32.4

Q ss_pred             CCcCccccCCCChHHHHHhhccC---CCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKA---GPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~---~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.   .+|+||||+|++.
T Consensus         6 l~~~~WyhG~isR~~Ae~lL~~~g~~~~G~FLVR~S~~~   44 (111)
T 2hdv_A            6 LSGYPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETR   44 (111)
T ss_dssp             GGGSTTEEEECCHHHHHHHHHTTGGGGTTEEEEEECSSC
T ss_pred             cccCCCcCCCCCHHHHHHHHHHcCCCCCCeEEEEecCCC
Confidence            55689999999999999999976   5999999999875

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.94  E-value=3.2e-10  Score=80.09  Aligned_cols=36  Identities=17%  Similarity=0.393  Sum_probs=33.0

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus        13 l~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~   48 (118)
T 2dlz_A           13 YTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAE   48 (118)
T ss_dssp             GGGSTTEEESCCHHHHHHHHHHSCTTBEEEECCSCS
T ss_pred             cccCCceecCCCHHHHHHHhcCCCCCEEEEEeCCCC
Confidence            557899999999999999999988999999999864

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=98.94  E-value=4.1e-10  Score=80.35  Aligned_cols=36  Identities=22%  Similarity=0.557  Sum_probs=32.2

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.+  +|+||||+|++.
T Consensus        23 l~~~~WyhG~isR~eAe~lL~~~g~~~G~FLVR~S~~~   60 (126)
T 2aug_A           23 HRSQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSN   60 (126)
T ss_dssp             GGGSTTEETTCCHHHHHHHHHTTTCCTTEEEEEECSSS
T ss_pred             cccCCcccCCCCHHHHHHHHhccCCCCCEEEEeecCCC
Confidence            556899999999999999999864  999999999874

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=98.93  E-value=4.6e-10  Score=79.39  Aligned_cols=37  Identities=24%  Similarity=0.376  Sum_probs=32.6

Q ss_pred             CCCcCccccCCCChHHHHHhhcc-CCCeeEEeeccCCC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVK-AGPVNFTISESDST  233 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~-~~~g~fliR~s~~~  233 (235)
                      .++..+||||.|+|++||++|.+ ..+|+||||+|++.
T Consensus         6 ~~~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~   43 (119)
T 2ysx_A            6 SGMVPCWNHGNITRSKAEELLSRTGKDGSFLVRASESI   43 (119)
T ss_dssp             SSCCCSSEEESCCHHHHHHHHHHHCCTTEEEEEECSSC
T ss_pred             CCCCCccccCCCCHHHHHHHHhhcCCCCEEEEEeCCCC
Confidence            35668999999999999999997 45999999999874

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.93  E-value=6e-10  Score=74.46  Aligned_cols=59  Identities=19%  Similarity=0.203  Sum_probs=49.3

Q ss_pred             ccEEEEeecc--CCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPY--TKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~--~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+++|  .. ....+|+|.+|+++.|+...+++| |.+|+..|+.|++|.+|++++++
T Consensus        39 l~~~~a~~~f~~~k-~g~~DLpfkkGE~LeVI~~~e~~w-wLcRNs~GkyGyVP~~yl~~~d~   99 (102)
T 1ri9_A           39 LYSTKVTTSITSKK-WGTRDLQVKPGESLEVIQTTDDTK-VLCRNEEGKYGYVLRSYLADNDG   99 (102)
T ss_dssp             SSCCBCCTTSCSSC-CCTTBCCCCTTCBCEEEEESSSSE-EEEEETTTEEEEEEGGGSCC---
T ss_pred             EEEEEEeecccccc-CCcccCCcCCCCEEEEEEeCCCCE-EEEECCCCCCCceeHHHhccccc
Confidence            3456777887  44 467899999999999999999999 99999999999999999987654

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=98.93  E-value=4.2e-10  Score=80.92  Aligned_cols=36  Identities=28%  Similarity=0.546  Sum_probs=32.8

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus        17 ~~~~~Wyhg~isR~eAe~lL~~~~~G~FLVR~S~s~   52 (131)
T 2kno_A           17 DTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSF   52 (131)
T ss_dssp             CCHHHHBCTTCCHHHHHHHHTTSCTTBEEEEECSSS
T ss_pred             cccCCceecCCCHHHHHHHhcCCCCCeEEEecCCCC
Confidence            456899999999999999999888999999999874

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=98.93  E-value=5.8e-10  Score=79.01  Aligned_cols=35  Identities=9%  Similarity=0.366  Sum_probs=32.0

Q ss_pred             CcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         9 ~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~   43 (120)
T 2iug_A            9 QNAEWYWGDISREEVNEKLRDTADGTFLVRDASTK   43 (120)
T ss_dssp             HTCTTBCCSCCHHHHHHHHTTCCTTEEEEEECSSG
T ss_pred             ccCCccccCCCHHHHHHHhcCCCCcEEEEECCCCC
Confidence            45899999999999999999877999999999874

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=98.91  E-value=2e-10  Score=87.31  Aligned_cols=36  Identities=14%  Similarity=0.038  Sum_probs=32.7

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||+|+|++||++|.+..+|+||||+|++.
T Consensus        31 l~~~~WYhG~isR~eAE~lL~~~~dGtFLVR~S~~~   66 (187)
T 2izv_A           31 INNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQE   66 (187)
T ss_dssp             HHHCTTEEEECCHHHHHHHHTTCCTTEEEEEECSST
T ss_pred             cccCCccccCCCHHHHHHHhcCCCCCcEEEEECCCC
Confidence            456899999999999999999888999999999864

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=98.91  E-value=7.1e-10  Score=76.52  Aligned_cols=34  Identities=26%  Similarity=0.383  Sum_probs=30.5

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.  .+|+||||+|++.
T Consensus         4 l~~~~Wyhg~isR~~Ae~lL~--~~G~FLVR~S~~~   37 (104)
T 1mil_A            4 LRGEPWFHGKLSRREAEALLQ--LNGDFLVRESTTT   37 (104)
T ss_dssp             TTTCTTBCSSCCHHHHHTTCC--STTEEEEEECCSS
T ss_pred             cccCCcCCCCCCHHHHHHHhc--cCCcEEEEeCCCC
Confidence            456899999999999999998  5999999999874

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=98.89  E-value=8.8e-10  Score=78.49  Aligned_cols=35  Identities=23%  Similarity=0.483  Sum_probs=32.1

Q ss_pred             CCCcCccccCCCChHHHHHhhccCC-CeeEEeeccC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESD  231 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~  231 (235)
                      .++..+||||.|+|++||++|.+.+ +|+||||+|+
T Consensus        15 ~l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~   50 (124)
T 2eob_A           15 PHESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKRE   50 (124)
T ss_dssp             STTTSTTEESSCCHHHHHHHHHHCCSSSEEEEECCT
T ss_pred             ccCcCCCeecCCCHHHHHHHHhcCCCCCEEEEEecC
Confidence            3667899999999999999999886 9999999997

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=98.89  E-value=5.7e-10  Score=78.80  Aligned_cols=33  Identities=18%  Similarity=0.586  Sum_probs=30.5

Q ss_pred             CCcCccccCCCChHHHHHhhccCC-CeeEEeecc
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG-PVNFTISES  230 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s  230 (235)
                      ++..+||||.|+|++||++|.+.+ +|+||||+|
T Consensus         6 l~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S   39 (118)
T 3s9k_A            6 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDS   39 (118)
T ss_dssp             GGGSTTBCTTCCHHHHHHHHHHHCCTTCEEEEEC
T ss_pred             cccCceecCCCCHHHHHHHHHhcCCCCeEEEEee
Confidence            556899999999999999999876 999999999

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=98.88  E-value=8.8e-10  Score=78.58  Aligned_cols=35  Identities=17%  Similarity=0.478  Sum_probs=31.7

Q ss_pred             CCCcCccccCCCChHHHHHhhccC-CCeeEEeeccC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKA-GPVNFTISESD  231 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~-~~g~fliR~s~  231 (235)
                      .++..+||||.|+|++||++|.+. .+|+||||+|+
T Consensus         7 ~l~~~~WyhG~isR~eAe~lL~~~g~~G~FLVR~Ss   42 (125)
T 2ge9_A            7 SIEMYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDSS   42 (125)
T ss_dssp             SSCCSSSEETTCCHHHHHHHHHHHTCTTEEEEEECS
T ss_pred             ccccCCccccCCCHHHHHHHHhhcCCCceEEEEecC
Confidence            366789999999999999999988 59999999994

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=98.38  E-value=2.3e-10  Score=93.98  Aligned_cols=59  Identities=24%  Similarity=0.228  Sum_probs=51.5

Q ss_pred             ccEEEEeeccCCC-CCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKM-PDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~-~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+. .+++||+|++||+|.|+.+.++|| |.++. +|+.|+||++||+.+..
T Consensus       237 ~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gW-w~g~~-~g~~G~fP~~yv~~~~~  296 (303)
T 2lqn_A          237 PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQ-WEGEV-NGRKGLFPFTHVKIFDP  296 (303)
Confidence            3569999999851 346799999999999999989999 99988 99999999999998754

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=7.3e-10  Score=79.07  Aligned_cols=36  Identities=22%  Similarity=0.528  Sum_probs=31.9

Q ss_pred             CCCCcCccccCCCChHHHHHhhccC-CCeeEEeeccC
Q psy13524        196 DPNTVFDWFHPECTKNDAVDMLVKA-GPVNFTISESD  231 (235)
Q Consensus       196 ~p~~~~~w~~~~~~r~~ae~~l~~~-~~g~fliR~s~  231 (235)
                      ..++..+||||.|+|++||++|.+. .+|+||||+|+
T Consensus        11 ~~l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~   47 (125)
T 2dm0_A           11 TNLEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDSR   47 (125)
T ss_dssp             CCCTTSSSBCCSCCHHHHHHHHHHHCSTTCBCEEEET
T ss_pred             cccccCCcccCCCCHHHHHHHHhhcCCCCEEEEEecC
Confidence            3466789999999999999999977 59999999994

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=98.85  E-value=1.1e-09  Score=79.44  Aligned_cols=38  Identities=21%  Similarity=0.377  Sum_probs=33.3

Q ss_pred             CCCCcCccccCCC-ChHHHHHhhccC------CCeeEEeeccCCC
Q psy13524        196 DPNTVFDWFHPEC-TKNDAVDMLVKA------GPVNFTISESDST  233 (235)
Q Consensus       196 ~p~~~~~w~~~~~-~r~~ae~~l~~~------~~g~fliR~s~~~  233 (235)
                      .+++..+||||.| +|++||++|++.      .+|+||||+|++.
T Consensus        17 ~~~~~~~WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~   61 (138)
T 2dx0_A           17 ELHFGEKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETF   61 (138)
T ss_dssp             GTTSCCTTBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSS
T ss_pred             ccccCCCcccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCC
Confidence            4577799999999 899999999964      5999999999874

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=98.84  E-value=1.3e-09  Score=76.51  Aligned_cols=35  Identities=26%  Similarity=0.499  Sum_probs=31.0

Q ss_pred             CCCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      .++..+||||.|+|++||++|.  .+|+||||+|++.
T Consensus        13 ~~~~~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~   47 (116)
T 2kk6_A           13 PLAEQDWYHGAIPRIEAQELLK--KQGDFLVRESHGK   47 (116)
T ss_dssp             CTTTCTTEEESCCHHHHHHTCC--STTCEEEEECTTC
T ss_pred             ccccCCCccCCCCHHHHHHHhc--cCCcEEEEECCCC
Confidence            3556899999999999999998  5899999999874

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=98.84  E-value=6.2e-10  Score=81.09  Aligned_cols=35  Identities=20%  Similarity=0.357  Sum_probs=31.4

Q ss_pred             CCcCccccCCCChHHHHHhhcc-CCCeeEEeeccCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVK-AGPVNFTISESDS  232 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~-~~~g~fliR~s~~  232 (235)
                      ++..+||||.|+|++||++|.. ..+|+||||+|++
T Consensus        20 l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~   55 (141)
T 2eo6_A           20 LLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSG   55 (141)
T ss_dssp             TTTCSSEEESCCHHHHHHHHHHHCCTTCBCEEECST
T ss_pred             cCCCCeEecCCCHHHHHHHhhccCCCceEEEEECCC
Confidence            5678999999999999999975 4599999999986

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=98.84  E-value=1.4e-09  Score=80.06  Aligned_cols=36  Identities=17%  Similarity=0.170  Sum_probs=32.5

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus        31 l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~   66 (152)
T 2hmh_A           31 LQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQ   66 (152)
T ss_dssp             HHHTSSEETTCCHHHHHHHHHTSCTTEEEEEECCST
T ss_pred             hccCCCcCCCCCHHHHHHHhcCCCCCcEEEEeCCCC
Confidence            446899999999999999999878999999999874

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=98.81  E-value=2.1e-09  Score=75.47  Aligned_cols=34  Identities=15%  Similarity=0.164  Sum_probs=29.9

Q ss_pred             cCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        200 VFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       200 ~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      ..+||+++|+|.+||++|...+ +|+||||+|++.
T Consensus        14 ~epWff~~isR~eAE~lL~~~~~~GaFLVR~Se~~   48 (125)
T 3maz_A           14 PMPACFYTVSRKEATEMLQKNPSLGNMILRPGSDS   48 (125)
T ss_dssp             CCCTTBCCCCHHHHHHHHHHCGGGCSEEEEECTTS
T ss_pred             CCCCCcCCCCHHHHHHHHhccCCCCcEEEEeCCCC
Confidence            3799999999999999997655 899999999764

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=98.79  E-value=1e-08  Score=63.67  Aligned_cols=42  Identities=29%  Similarity=0.620  Sum_probs=38.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH  175 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~  175 (235)
                      ....++|+|+|.+ +.+++|+|++||+|.|+++.+++| |.+++
T Consensus        20 ~~~~~~alydy~a-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~   61 (62)
T 1g2b_A           20 GKELVLALYDYQE-KSPREVTMKKGDILTLLNSTNKDW-WKVEV   61 (62)
T ss_dssp             SSCEEEECSCBCC-SSTTBCCBCTTCEEEEEECCSSSE-EEEEE
T ss_pred             CceEEEEeeeECC-CCCCccCCCCCCEEEEEEecCCCE-EEEEe
Confidence            3468999999999 899999999999999999989999 99875

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=98.79  E-value=1.8e-09  Score=80.37  Aligned_cols=36  Identities=17%  Similarity=0.170  Sum_probs=32.5

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus        20 L~~~~WyhG~IsR~eAe~lL~~~~~GtFLVR~S~s~   55 (164)
T 2bbu_A           20 LQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQ   55 (164)
T ss_dssp             HHHTSCCCTTSCHHHHHHHHHHSSTTCCEEEECSTT
T ss_pred             hccCCccCCCCCHHHHHHHhcCCCCCCEEEEECCCC
Confidence            455899999999999999998877999999999874

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=98.78  E-value=6.5e-10  Score=91.54  Aligned_cols=58  Identities=14%  Similarity=0.238  Sum_probs=0.0

Q ss_pred             ccEEEEeeccCCC-CCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKM-PDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~-~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+. .+++||+|++||+|.|+++.+++| |.++. +|+.|+||++||+.++
T Consensus       247 ~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~~~w-w~g~~-~g~~G~fP~~yv~~~~  305 (308)
T 3qwy_A          247 PAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGM-YKAEL-DGQIGSVPHTYLRFTA  305 (308)
T ss_dssp             -------------------------------------------------------------
T ss_pred             ccccccccccccccCCcccceeCCCCEEEEEEEcCCCc-EEEEE-CCeeEEechHHeEEec
Confidence            4568999999551 356899999999999999988999 98888 9999999999999764

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=98.74  E-value=1e-09  Score=95.74  Aligned_cols=57  Identities=26%  Similarity=0.499  Sum_probs=0.0

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ..+++|+|.+||+|.|+...+ +|| |.++..+|+.|+||++||+.+
T Consensus       428 ~~~~~alydy~~-~~~~eLsf~~Gd~i~vl~~~~~~~W-w~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          428 EVRVRALYDYEG-QEHDELSFKAGDELTKMEDEDEQGW-CKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             ------------------------------------------------------------
T ss_pred             CeEEEEccccCC-CCCCcCccCCCCEEEEEEecCCCCe-eEEEeCCCCEEEEeHHHceeC
Confidence            456899999999 899999999999999998874 588 999985599999999999865

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=98.73  E-value=2.7e-09  Score=87.17  Aligned_cols=54  Identities=24%  Similarity=0.461  Sum_probs=46.5

Q ss_pred             EEEEeeccCCCCCCC-----CcccCCCCEEEEeeccCCCeeEEEecCC-----CceeEEeCCcEEe
Q psy13524        135 RIVAILPYTKMPDTD-----ELTFQKGDIFFVHNELGDGWLWVTAHRT-----GEQGMIFRDLVED  190 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~-----eL~~~~gd~i~v~~~~~~~w~w~~~~~~-----~~~G~~P~~~v~~  190 (235)
                      .++|+|||.+ ..++     +|+|++||++.|+++.+++| |.++..+     ++.|+||++|++.
T Consensus         3 ~vrAlydy~~-~~~~~~p~~eLsf~~GDil~V~~~~d~~W-W~a~~~~~~~~~~~~G~iPsny~~e   66 (295)
T 1kjw_A            3 YIRALFDYDK-TKDCGFLSQALSFRFGDVLHVIDAGDEEW-WQARRVHSDSETDDIGFIPSKRRVE   66 (295)
T ss_dssp             EEEESSCBCH-HHHHCCCSSBCCBCTTCEEEEEECCSSSE-EEEEECCSSCCCSCCEEEECHHHHH
T ss_pred             EEEEeeccCC-CCCCCCCCcCCcCCCCCEEEEEEeCCCCe-EEEEECCCCCccCceeEeecHHHHH
Confidence            5899999998 5555     99999999999999999999 9998753     3789999999843

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=98.63  E-value=2.4e-08  Score=66.13  Aligned_cols=58  Identities=22%  Similarity=0.232  Sum_probs=49.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC--CCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG--DGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~--~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+++. . .+..+|+|.+|+++.|+...+  .|| |.+|+..|+.|++|.+||+.-.
T Consensus        27 vl~~a~a~~~~-k-~g~~dLp~~~GE~LeII~~~e~p~g~-Wl~RN~~G~~GyVp~~~v~vd~   86 (96)
T 2gtj_A           27 VIHLAKACCDV-K-GGKNELSFKQGEQIEIIRITDNPEGK-WLGRTARGSYGYIKTTAVEIDY   86 (96)
T ss_dssp             CCEEEEESSCE-E-CTTSCCEECTTCCEEEEECTTCSSSC-CEEECTTCCBCCCCGGGEEECS
T ss_pred             eEEEEEEeecC-C-CCcccCCcCCCCEEEEEEccCCCCCe-EEEECCCCCCCccchhhEEEEh
Confidence            34578899884 3 578899999999999999875  679 9999999999999999998643

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=98.59  E-value=5.3e-08  Score=87.60  Aligned_cols=60  Identities=25%  Similarity=0.427  Sum_probs=50.0

Q ss_pred             CccEEEEeeccC---CCCCCCCcccCCCCEEEEeec-----cCCCeeEEEec-CCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYT---KMPDTDELTFQKGDIFFVHNE-----LGDGWLWVTAH-RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~---~~~~~~eL~~~~gd~i~v~~~-----~~~~w~w~~~~-~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|++||.   + .+++.|+|++||+|.++..     .++|| |.|++ .+|+.|+||++||..+..
T Consensus       572 rs~~~~Al~d~~~~~~-~~~~~L~f~kGDlI~l~~~~~~~~~~~~W-~~G~~~~~g~~G~fP~~~V~~lpt  640 (655)
T 3pvl_A          572 RSKYVVALQDNPNPAG-EESGFLSFAKGDLIILDHDTGEQVMNSGW-ANGINERTKQRGDFPTDCVYVMPT  640 (655)
T ss_dssp             HCCEEEESSCCCC------CCBCCCCTTCEEEESSCCHHHHHHSSE-EEEEETTTCCEEEEEGGGEEECCC
T ss_pred             cchhhhHHhhcccCCC-CCCCcccccCCCEEEEccccCcccCCCCe-EEEEeCCCCceEEeEhhhEEECCC
Confidence            357899999999   5 6788999999999999888     47899 88884 499999999999998853

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=98.58  E-value=6.8e-08  Score=79.26  Aligned_cols=55  Identities=18%  Similarity=0.438  Sum_probs=45.9

Q ss_pred             CccEEEEeeccCCCCCCC------CcccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCCc
Q psy13524        132 DKKRIVAILPYTKMPDTD------ELTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRDL  187 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~------eL~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~~  187 (235)
                      ....++|+|||.+..+.+      +|+|++||++.|+++.+++| |.++..  +|..|+||+++
T Consensus        37 ~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~W-Wqar~~~~~g~~GlIPS~~   99 (337)
T 4dey_A           37 VAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDW-WIGRLVKEGCEIGFIPSPV   99 (337)
T ss_dssp             CCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSE-EEEEESSTTCCCEEEECHH
T ss_pred             ccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCe-EEEEECCCCCCccEecCHH
Confidence            346899999999933322      59999999999999999999 999874  46799999986

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.36  E-value=2.3e-06  Score=55.84  Aligned_cols=57  Identities=11%  Similarity=0.210  Sum_probs=45.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccC----CCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELG----DGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~----~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..+.+..++.+ ..+-+|++++||++.|+.+.|    ..||| ... .|..||+|++|++++..
T Consensus        18 ~LY~~t~~~~~-tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~-Vdt-gg~~GyvPs~yLe~~~~   78 (92)
T 1ug1_A           18 KLFQAERNFNA-AQDLDVSLLEGDLVGVIKKKDPMGSQNRWL-IDN-GVTKGFVYSSFLKPYNP   78 (92)
T ss_dssp             GEEEESSCCCC-CSSSCCCCCTTCEEEEEESCCTTSCSSEEE-EEC-SSSEEEEEGGGEEECCC
T ss_pred             heEEeccCcCC-CCceeeeecCCCEEEEEecCCCCCCCcceE-EEC-CCcEEeeEhhhceEccc
Confidence            45666666766 567799999999999999874    45636 554 89999999999999864

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=98.31  E-value=7.3e-07  Score=75.54  Aligned_cols=57  Identities=26%  Similarity=0.373  Sum_probs=48.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeec---cCCCeeEEEecCCC-----ceeEEeCCcEEe
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNE---LGDGWLWVTAHRTG-----EQGMIFRDLVED  190 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~---~~~~w~w~~~~~~~-----~~G~~P~~~v~~  190 (235)
                      ....++|+|+|.+ .++.+|+|++||++.|++.   .+.+| |.++..+.     ..|+||++|+..
T Consensus       105 ~~~~vral~dy~~-~~~~~Lsf~~Gdil~V~~~~~~~d~~w-W~a~~~~~~~~~~~~G~IPs~~~~e  169 (391)
T 3tsz_A          105 DSFYIRTHFEYEK-ESPYGLSFNKGEVFRVVDTLYNGKLGS-WLAIRIGKNHKEVERGIIPNKNRAE  169 (391)
T ss_dssp             CCEEEEECSCBCC-SSTTBCCBCTTCEEEEEESSGGGSSSE-EEEEEECGGGCEEEEEEEECHHHHH
T ss_pred             cccccccccccCC-CCCCcceEccCCEEEEEeccCCCCCCe-EEEEEeCCCCCcccCCEecCHHHHH
Confidence            3457889999999 8889999999999999998   57889 88876433     489999999864

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=98.27  E-value=6.7e-07  Score=72.94  Aligned_cols=55  Identities=24%  Similarity=0.416  Sum_probs=43.5

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCC---------eeEEEecCC-----CceeEEeCCcEEe
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDG---------WLWVTAHRT-----GEQGMIFRDLVED  190 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~---------w~w~~~~~~-----~~~G~~P~~~v~~  190 (235)
                      ..++|+|+|.+ ..+.+|+|.+||++.|++..++|         | |.+...+     +..|++|.+|+..
T Consensus         5 fyVRalfdy~~-~~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gw-W~A~~~~~~~~~~~~G~IPs~~~ae   73 (308)
T 3kfv_A            5 FYIRTHFELEP-SPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGH-WLAVRMGRDLREQERGIIPNQSRAE   73 (308)
T ss_dssp             EEEEECSCBCC-CSSSBCCBCTTCEEEEEEC-------------C-EEEEEECTTSCEEEEEEECCHHHHH
T ss_pred             EEEEEecCcCC-CCcccCCCccCCEEEEccccCCCcccccccCce-EEEEecCCCCCcCCCCeeechHHHH
Confidence            46789999999 89999999999999999988666         9 8887542     2689999998753

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=98.24  E-value=1.8e-06  Score=67.95  Aligned_cols=57  Identities=25%  Similarity=0.499  Sum_probs=50.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCC---eeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDG---WLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~---w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      .....++++|.+ ..+.+|.+.+|+++.|+.+.+.+   | |.++. +++.|+||.+||+.+.
T Consensus       170 ~~~~~al~d~~~-~~~~eLa~~~G~~i~vl~~~~~~~~~W-w~~~~-~~~~G~~P~~yv~~~~  229 (239)
T 1ycs_B          170 KGVIYALWDYEP-QNDDELPMKEGDCMTIIHREDEDEIEW-WWARL-NDKEGYVPRNLLGLYP  229 (239)
T ss_dssp             GGEEEESSCBCC-SSTTBCCBCSSCEEEECCCCTTSCSSE-EEEEE-TTEEEEEEGGGEECCC
T ss_pred             cceEEEEeccCC-CCCCcccccCCCEEEEEEecCCCCCCE-EEEEE-CCcEEEeehHHeeECC
Confidence            356789999999 88899999999999999887655   9 99887 8999999999999764

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=98.20  E-value=1.6e-06  Score=74.83  Aligned_cols=56  Identities=25%  Similarity=0.350  Sum_probs=47.3

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec---cCCCeeEEEecCC--C---ceeEEeCCcEEe
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE---LGDGWLWVTAHRT--G---EQGMIFRDLVED  190 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~---~~~~w~w~~~~~~--~---~~G~~P~~~v~~  190 (235)
                      ...++|+|+|.+ ..+.+|+|++||++.|++.   .+.+| |.++..+  +   +.|+||++|+..
T Consensus        98 s~yVralfdy~~-~~~~~LsF~~GDIL~V~d~~~~~d~~w-W~A~~~~~~~~~~~~GlIPs~~~~e  161 (468)
T 3shw_A           98 SFYIRTHFEYEK-ESPYGLSFNKGEVFRVVDTLYNGKLGS-WLAIRIGKNHKEVERGIIPNKNRAE  161 (468)
T ss_dssp             CEEEEECSCBCC-SSTTBCCBCTTCEEEEEESSGGGCTTE-EEEEEECTTSCEEEEEEEECHHHHH
T ss_pred             ccccccccCcCC-CCCCCceEccCCEEEEeecccCCCCCe-EEEEEcCCCCcccccceecCHHHHH
Confidence            357889999999 7889999999999999998   57899 8887642  2   589999999854

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=98.19  E-value=3.3e-06  Score=68.40  Aligned_cols=55  Identities=16%  Similarity=0.218  Sum_probs=46.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|||.+    .++++.+||.+.+++..+..| |..+..+|..|++|++|+...
T Consensus       197 ~~~~v~al~dy~~----~e~~~~kge~~~l~~~s~~~w-W~v~~~~G~~g~vPs~~~~ip  251 (283)
T 3pe0_A          197 GRLPLLAVCDYKQ----VEVTVHKGDECQLVGPAQPSH-WKVLSSSGSEAAVPSVCFLVP  251 (283)
T ss_dssp             SCEEEEECSCEEC----SSCEECTTCEEEEEEECSTTE-EEEECC---EEEEEGGGEECC
T ss_pred             CCceEEeecCccC----CcccccCCCEEEEeeCCCCCc-eEEEcCCCCEeeccceEEeeC
Confidence            4568999999988    379999999999999988899 999998999999999999754

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=98.18  E-value=1.9e-06  Score=70.07  Aligned_cols=52  Identities=27%  Similarity=0.553  Sum_probs=39.0

Q ss_pred             ccEEEEeeccCCCCCCC-----CcccCCCCEEEEeeccCCCeeEEEecC-----CCceeEEeCC
Q psy13524        133 KKRIVAILPYTKMPDTD-----ELTFQKGDIFFVHNELGDGWLWVTAHR-----TGEQGMIFRD  186 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~-----eL~~~~gd~i~v~~~~~~~w~w~~~~~-----~~~~G~~P~~  186 (235)
                      ...++|++||.+ ..+.     .|+|++||++.|+++.|++| |.++..     ....|++|+.
T Consensus         5 s~yvRa~fdY~~-~~D~~~P~~gL~F~~gDiL~V~~~~d~~w-WqA~~v~~~~~~~~~GlIPS~   66 (292)
T 3tvt_A            5 SLYVRALFDYDP-NRDDGLPSRGLPFKHGDILHVTNASDDEW-WQARRVLGDNEDEQIGIVPSK   66 (292)
T ss_dssp             CCEEEECSCBCC----------CCCBCTTCEEEEEECCSSSE-EEECCCCC--------EEECH
T ss_pred             eEEEEEeccCCC-CCCCCCCCCcCCcCCCCEEEEeecCCCCe-EEEEEeCCCCCccceeEEeCh
Confidence            357899999999 4333     69999999999999999999 999864     2247999995

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=98.15  E-value=1.7e-06  Score=78.97  Aligned_cols=55  Identities=24%  Similarity=0.405  Sum_probs=46.7

Q ss_pred             ccEEEEeeccCCCCCCCC-----cccCCCCEEEEeeccCCCeeEEEecCC-----CceeEEeCCcEE
Q psy13524        133 KKRIVAILPYTKMPDTDE-----LTFQKGDIFFVHNELGDGWLWVTAHRT-----GEQGMIFRDLVE  189 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~e-----L~~~~gd~i~v~~~~~~~w~w~~~~~~-----~~~G~~P~~~v~  189 (235)
                      ...++|+|+|.+ ..+++     |+|++||++.|+++.+.+| |.++...     +..|+||++|+.
T Consensus       427 ~~~vrAl~dy~~-~~d~~~p~~~LsF~~GDil~v~~~~~~~W-W~a~~~~~~~~~~~~G~iPs~~~~  491 (721)
T 2xkx_A          427 GFYIRALFDYDK-TKDCGFLSQALSFRFGDVLHVIDAGDEEW-WQARRVHSDSETDDIGFIPSKRRV  491 (721)
T ss_pred             ceeEEEeeccCc-CCCCCCccccccccCCCEEEEeecCCCCe-EEEEECCCCCccCccceeecHHHH
Confidence            356799999999 66666     9999999999999999999 9998752     346999999884

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=98.08  E-value=4e-06  Score=64.92  Aligned_cols=57  Identities=25%  Similarity=0.554  Sum_probs=51.1

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..+.+++|++||++.+....+.+| |.+.. .+..|++|.+|+...
T Consensus        13 ~~~~~~al~d~~~-~~~~el~~~~Gd~~~v~~~~~~~w-~~~~~-~g~~gl~p~~~v~~~   69 (222)
T 3ehr_A           13 QVKVFRALYTFEP-RTPDELYIEEGDIIYITDMSDTNW-WKGTS-KGRTGLIPSNYVAEQ   69 (222)
T ss_dssp             CCEEEEESSCCCC-SSTTBCCCCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEHHHHHHH
T ss_pred             CceEEEEeCCcCC-CCCCcccccCCCEEEEeccccchh-Hhccc-CCcceeechhhcccc
Confidence            3567899999999 889999999999999999999999 98888 899999999988644

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.78  E-value=9.5e-07  Score=62.71  Aligned_cols=37  Identities=16%  Similarity=0.111  Sum_probs=26.4

Q ss_pred             eEEeCCcEEeccCCCCCCCcCccccCCCChHHHHHhhccCC---CeeEEeeccC
Q psy13524        181 GMIFRDLVEDLDETIDPNTVFDWFHPECTKNDAVDMLVKAG---PVNFTISESD  231 (235)
Q Consensus       181 G~~P~~~v~~~~~~~~p~~~~~w~~~~~~r~~ae~~l~~~~---~g~fliR~s~  231 (235)
                      +++|+|||.+.+    .++..+|||          +|...+   ||+||||+|+
T Consensus        14 ~~iPsnyv~~~~----~l~~~~Wyh----------~Ll~~g~~~dG~FLVR~S~   53 (126)
T 2cr4_A           14 PLPNSVFVNTTE----SCEVERLFK----------ATSPRGEPQDGLYCIRNSS   53 (126)
T ss_dssp             SSCTTTBCSCCC----HHHHHHHHH----------HHSTTSCCCTTCEEEEECS
T ss_pred             CCCCHhhcCccc----ccccCCCHH----------HHhhCCCCCCCeEEEEecC
Confidence            568999996432    255689999          333222   5999999998

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=97.74  E-value=4.9e-05  Score=65.30  Aligned_cols=57  Identities=16%  Similarity=0.158  Sum_probs=50.5

Q ss_pred             CCCccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        130 VNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       130 ~~~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ......++|++||..    .++++.+||.+++++..+..| |.....+|..|++|+.|+...
T Consensus       280 ~~~~~~V~alcdy~~----~e~~i~kge~~~L~~ns~~~~-W~V~~~~G~~~~vPavcf~ip  336 (450)
T 3r6n_A          280 SNKPIILRALCDYKQ----DQKIVHKGDECILKDNNERSK-WYVTGPGGVDMLVPSVGLIIP  336 (450)
T ss_dssp             CSSCCEEEESSCEEE----TTEEECTTCEEEEEECSSSSE-EEEECSSSCCEEEEGGGEECC
T ss_pred             cCCCceEEEeccccC----CeeeEecCCEEEEecCCCCCc-eEEecCCCCeeccceeEEecC
Confidence            334678999999997    789999999999999999999 999988899999999999744

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=97.25  E-value=0.00014  Score=62.01  Aligned_cols=34  Identities=18%  Similarity=0.129  Sum_probs=31.2

Q ss_pred             cCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        200 VFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       200 ~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ...|++|=|+|.+|+++|.++.+||||||.|+|.
T Consensus       350 ~dg~I~GFIsk~ea~~lL~~~~~GTFLLRFSeS~  383 (473)
T 1uur_A          350 QEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERN  383 (473)
T ss_dssp             HHTSSCBSCCHHHHHHTTSSCCTTCEEEEECSSS
T ss_pred             hcCcEEEEecHHHHHHHhhCCCCCeEEEEeccCC
Confidence            3588999999999999999999999999999984

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=97.07  E-value=6e-06  Score=68.73  Aligned_cols=57  Identities=14%  Similarity=0.223  Sum_probs=42.1

Q ss_pred             EEEEeeccCCC---CCCCCccc--CCCCEEEEeeccCCCeeEEEecC--CCceeEEeCC-cEEecc
Q psy13524        135 RIVAILPYTKM---PDTDELTF--QKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRD-LVEDLD  192 (235)
Q Consensus       135 ~~~a~~~~~~~---~~~~eL~~--~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~-~v~~~~  192 (235)
                      .++|+|+|.++   .++.+|+|  ..||+|.|+++.|.|| |.|+..  +|+.|+||.+ ||+..+
T Consensus       268 ~~~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~~d~gW-w~Ge~~g~~G~~glfP~~~~v~~~~  332 (341)
T 2dyb_A          268 LLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVAL-MVRQARGLPSQKRLFPWKLHITQKD  332 (341)
T ss_dssp             CHHHHHHHHHHHHTCSCEEEEEECSSSCEEECCSHHHHHH-HHHHHTTSCCBTTBCSSCEEEEECC
T ss_pred             chhhhhhhhhhhcCCCcccccCCCCCCCEEEEeeecCCCE-eEEEECCCCCCCceecceeEEEecC
Confidence            34578888761   13345555  8999999999999999 998762  5566799998 776554

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=96.60  E-value=0.0012  Score=59.07  Aligned_cols=32  Identities=22%  Similarity=0.228  Sum_probs=28.0

Q ss_pred             CccccCC----CChHHHHHhhccCCCeeEEeeccCC
Q psy13524        201 FDWFHPE----CTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       201 ~~w~~~~----~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      ..|..|-    |+|++|+++|++..+||||+|.|+|
T Consensus       571 ~~W~dG~I~GFIsK~~a~~lL~~~~~GTFLLRFSdS  606 (683)
T 1yvl_A          571 PLWNDGCIMGFISKERERALLKDQQPGTFLLRFSES  606 (683)
T ss_dssp             HHHHTTCCCBCCCHHHHHHHHSSSCSSCEEEEECSS
T ss_pred             hhccCCceEEeecHHHHHHHHhCCCCCeEEEecCCC
Confidence            3555554    8999999999999999999999998

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=96.55  E-value=0.00083  Score=58.68  Aligned_cols=32  Identities=22%  Similarity=0.228  Sum_probs=27.9

Q ss_pred             CccccCC----CChHHHHHhhccCCCeeEEeeccCC
Q psy13524        201 FDWFHPE----CTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       201 ~~w~~~~----~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      ..|..|-    |+|++|+.+|.+..+||||+|.|+|
T Consensus       436 ~~W~dG~I~GFIsK~~a~~lL~~~~~GTFLLRFSdS  471 (575)
T 1bf5_A          436 PLWNDGCIMGFISKERERALLKDQQPGTFLLRFSES  471 (575)
T ss_dssp             HHHHTTCCCCCCCHHHHHHHTTTCCSCCCCEEECSS
T ss_pred             hhccCCceEEeecHHHHHHHHhCCCCCeEEEecCCC
Confidence            4565555    4999999999999999999999998

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=96.17  E-value=0.0024  Score=56.15  Aligned_cols=29  Identities=28%  Similarity=0.250  Sum_probs=25.9

Q ss_pred             cCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        205 HPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       205 ~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      +|=|+|.+|+++|.+..+||||||.|+|.
T Consensus       468 ~Gfisk~~a~~~L~~~~~GtFLlRFSds~  496 (585)
T 1y1u_A          468 LGFVNKQQAHDLLINKPDGTFLLRFSDSE  496 (585)
T ss_dssp             CBSCCHHHHHHHHHTSCTTCEEEEEETTS
T ss_pred             EEeccHHHHHHHHhCCCCCceEEEeccCC
Confidence            34479999999999999999999999984

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=95.87  E-value=0.0016  Score=57.18  Aligned_cols=32  Identities=22%  Similarity=0.226  Sum_probs=27.7

Q ss_pred             CccccC----CCChHHHHHhhccCCCeeEEeeccCC
Q psy13524        201 FDWFHP----ECTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       201 ~~w~~~----~~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      ..|.+|    =|+|++|+++|.+..+||||||.|+|
T Consensus       452 ~lW~dG~I~Gfisk~~a~~lL~~~~~GTFLlRFSes  487 (596)
T 1bg1_A          452 ALWNEGYIMGFISKERERAILSTKPPGTFLLRFSES  487 (596)
T ss_dssp             HHHHSSCCCBCCCTTGGGTTTTTSCTTCBCEEECSS
T ss_pred             hhcccCCeEEEecHHHHHHHHhCCCCCeeEEeecCC
Confidence            345555    48999999999999999999999998

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=95.47  E-value=0.022  Score=40.08  Aligned_cols=47  Identities=21%  Similarity=0.317  Sum_probs=37.3

Q ss_pred             eEEEEEee-cCeeEee------eEEEcchhhhhhccccCCchhhcccccCCCCCC
Q psy13524         80 AIFRVTAV-CGDFYIG------GRQFDSLSDLISYYSSCSDLLKRERLAHPCPPP  127 (235)
Q Consensus        80 ~~~~l~~~-~g~~~~g------~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~  127 (235)
                      .|++|.+. .|.+.++      ...|.++.+||++|+..+.... +.+..|++.+
T Consensus        52 ~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~~gl~-~~L~~P~~~~  105 (128)
T 1ka6_A           52 YTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIV-IPLQYPVEKK  105 (128)
T ss_dssp             EEEEEEECTTSCEEEECSTTSCCCEESSHHHHHHHTTSSCSSSS-SCCCSBCCSS
T ss_pred             EEEEEEECCCCeEEEeecCCCCCCccCCHHHHHHHHhhCCCCCc-EEcCCcCCCC
Confidence            79999864 6788887      4799999999999998765554 6777777643

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=94.32  E-value=0.026  Score=38.49  Aligned_cols=44  Identities=25%  Similarity=0.502  Sum_probs=31.7

Q ss_pred             eEEEEEeec------------------CeeEeeeEEEcchhhhhhccccCCchhhcccccCCCC
Q psy13524         80 AIFRVTAVC------------------GDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCP  125 (235)
Q Consensus        80 ~~~~l~~~~------------------g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~  125 (235)
                      .|++|....                  |.+.+++..|+++.+||++|+..+  +..+.+..|++
T Consensus        47 ~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~l~~~~F~sl~~LV~~y~~~~--l~~~~L~~Pv~  108 (109)
T 1ju5_A           47 SHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHY--LDTTTLIEPVS  108 (109)
T ss_dssp             EEEEEECCSSSSCCCCCCSSCCTTCCCCCEEETTEEESSHHHHHHHHHHSC--SSSSCCCEESC
T ss_pred             EEEEEEECCCCcccccccccccccccccEEEeCCcccCCHHHHHHHHhhCC--CCCeecCccCC
Confidence            788887654                  356677889999999999998764  32245666543

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=93.12  E-value=0.23  Score=31.11  Aligned_cols=39  Identities=21%  Similarity=0.394  Sum_probs=32.3

Q ss_pred             cccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        151 LTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       151 L~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      -.+.+|+.+.|++. .++| ...+. +|..||+...|+....
T Consensus        25 ~~l~~G~~v~v~~~-~~~W-~kV~~-~g~~GwV~~~yl~~~~   63 (74)
T 2krs_A           25 GTLRNNDKVEIIKE-VDGW-YEIRF-NGKVGYASKSYITIVN   63 (74)
T ss_dssp             EEEETTCEEEEEEE-ETTE-EEEEE-TTEEEEECSSSEEESS
T ss_pred             EEECCCCEEEEEEE-eCCE-EEEEE-CCeEEEEEhHHcCCCC
Confidence            45678999999987 4678 88887 6999999999998765

>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A

Probab=92.79  E-value=0.26  Score=31.01  Aligned_cols=40  Identities=10%  Similarity=0.320  Sum_probs=33.0

Q ss_pred             cccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        151 LTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       151 L~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      -.+.+|+.+.|++. .++| ...+. +|..||+...|+.....
T Consensus        27 ~~l~~G~~v~vl~~-~~~W-~kV~~-~g~~GwV~~~yl~~~~~   66 (76)
T 2kt8_A           27 GSLSGNTKVTIVGE-EGAF-YKIEY-KGSHGYVAKEYIKDIKD   66 (76)
T ss_dssp             EEECTTCEEEEEEE-ETTE-EEEEE-TTEEEEEEGGGEEEEEC
T ss_pred             EEECCCCEEEEEEE-eCCE-EEEEE-CCEEEEEEhHHhCcCCC
Confidence            35678999999987 5688 88887 89999999999987653

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=90.82  E-value=0.2  Score=42.85  Aligned_cols=50  Identities=12%  Similarity=0.366  Sum_probs=38.2

Q ss_pred             CeEEeecCCCCCCEEEEEEEC---CEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhh
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN---NQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRK   55 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~---~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~   55 (235)
                      +||||-|++.+|.|++|....   +.++|+.|......     ..-.|++|.|.-|..
T Consensus       374 TFLLRFSeS~~GgitIsyV~~d~~~~~kh~~v~p~t~~-----ls~~SL~D~I~d~~q  426 (473)
T 1uur_A          374 TFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA-----AAKKTFPDFLSEHSQ  426 (473)
T ss_dssp             CEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGSB-----TTTBCHHHHHTTCTT
T ss_pred             eEEEEeccCCCceEEEEEEeecCCCceeEEEecCCccc-----cccCCHHHHHhccHH
Confidence            799999999999999999874   58999988643221     234788888886644

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=90.00  E-value=0.17  Score=39.28  Aligned_cols=45  Identities=22%  Similarity=0.425  Sum_probs=33.8

Q ss_pred             eEEEEEeec------------------CeeEeeeEEEcchhhhhhccccCCchhhcccccCCCCC
Q psy13524         80 AIFRVTAVC------------------GDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPP  126 (235)
Q Consensus        80 ~~~~l~~~~------------------g~~~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~  126 (235)
                      .|++|....                  |.+.++...|.++.+||++|+..+.  ..+.+..|++.
T Consensus        60 ~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~~l--~~~~L~~Pv~~  122 (230)
T 2dvj_A           60 SHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYL--DTTTLIEPVSR  122 (230)
T ss_dssp             CCEECBCCCSCCSSSSSSSSTTTSCCCCCEESSSCEESSHHHHHTTSTTTCS--SSSCCCCBCCS
T ss_pred             EEEEEEeCCCCcccccccccccccccceEEEeCCceeCCHHHHHHHHhhCcc--ccccccccccc
Confidence            788887664                  3566678899999999999988653  24667777754

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=89.62  E-value=0.064  Score=51.34  Aligned_cols=109  Identities=15%  Similarity=0.319  Sum_probs=0.0

Q ss_pred             eEEeecCCCCCCEEEEEEE-CCEEeEEEEEeeCC-------e-EEcCCcccCCHHHHHHHhhhCCc--------------
Q psy13524          2 FLVRPSDNSPGDYSLFFHI-NNQIQRFRIEKKAV-------R-YLMGGRTFECLDAVINRYRKEQI--------------   58 (235)
Q Consensus         2 FLvR~s~~~~g~~~lsv~~-~~~v~h~~I~~~~~-------~-~~~~~~~F~sl~eLi~~y~~~~~--------------   58 (235)
                      ++||.|+..+...+++++. ++...|+-|...+.       . +.+++..|..|.|||.-|-..-.              
T Consensus      1047 ~vIRPSSkG~dhLtvTwKv~d~vyqHidV~E~~K~n~~slG~~L~I~~~~y~DLDEli~r~V~pm~~~v~e~~~h~kf~~ 1126 (1219)
T 3psi_A         1047 FVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGKVLIVDNQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKS 1126 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EEEeecCCCCCceEEEEEEcCCcEEEEEEEecCCccccccCceEEECCceECCHHHHHHHHHHHHHHHHHHHHhChhhcC
Confidence            6899998766667888876 45689999875321       2 56778899999999988844110              


Q ss_pred             cc----ceeeC-----Cc--------cccCCCceeecc---------eEEEEEeecCeeEeeeEEEcchhhhhhcccc
Q psy13524         59 VE----GHTLG-----FP--------VTRINLGIFIPS---------AIFRVTAVCGDFYIGGRQFDSLSDLISYYSS  110 (235)
Q Consensus        59 ~~----~~~L~-----~p--------~~~~~~~~~l~~---------~~~~l~~~~g~~~~g~~~f~~l~~lv~~~~~  110 (235)
                      +.    .-.|.     .|        +.+..+||++..         .|+-+.-.-+.|.+.+..|+++..|+.+++.
T Consensus      1127 g~~~eve~~L~~~k~~nP~ri~Y~f~~~~~~PG~F~L~f~~~~~~~~~~~~v~v~p~Gf~~r~~~f~~~~~L~~~FK~ 1204 (1219)
T 3psi_A         1127 GTKKDVVKFIEDYSRVNPNKSVYYFSLNHDNPGWFYLMFKINANSKLYTWNVKLTNTGYFLVNYNYPSVIQLCNGFKT 1204 (1219)
T ss_dssp             ------------------------------------------------------------------------------
T ss_pred             CCHHHHHHHHHHHHHhCCCcceEEEEeCCCCCCEEEEEEecCCCCCceeeeEEEccCeEEEcCccCcCHHHHHHHHHH
Confidence            00    00111     11        111167887543         2333444445566669999999999998875

>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1

Probab=89.49  E-value=1.8  Score=26.44  Aligned_cols=54  Identities=13%  Similarity=0.204  Sum_probs=39.5

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCC----CceeEEeCCcEE
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRT----GEQGMIFRDLVE  189 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~----~~~G~~P~~~v~  189 (235)
                      .+....+|.| -.+++++...|+++.++.....+...--+..+    ...||+|-.-+.
T Consensus         9 ~m~V~~dY~A-~ke~eI~v~~ge~Vqila~nqqnm~Lv~~~a~~q~paaegWvPG~vLg   66 (74)
T 1wfw_A            9 TMTVIKDYYA-LKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILA   66 (74)
T ss_dssp             EEECCSCBCC-CSSSCCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGCC
T ss_pred             cEEEEeeeee-eccceeccccCcEEEEEEecCcceEEEEeecCCCCccccCcccccEec
Confidence            3455789999 88999999999999999887776523333332    347999976543

>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}

Probab=89.32  E-value=0.12  Score=31.97  Aligned_cols=38  Identities=24%  Similarity=0.429  Sum_probs=30.7

Q ss_pred             ccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        152 TFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       152 ~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      .+.+|+.+.|++. .++| ...+. +|..||+...|+...+
T Consensus        27 ~l~~G~~v~v~~~-~~~W-~~V~~-~G~~GwV~~~~l~~~~   64 (70)
T 2kq8_A           27 ALPQGQKVQVISE-NSGW-SKINY-NGQTGYIGTRYLSKLE   64 (70)
T ss_dssp             CCCSSSSCCCCEE-ETTE-EEEEE-TTEEEEEETTSCSCCC
T ss_pred             EECCCCEEEEEEe-cCCE-EEEEE-CCEEEEEEhHHccchh
Confidence            4667888888876 5688 88887 8999999999987654

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=87.93  E-value=0.36  Score=28.82  Aligned_cols=16  Identities=31%  Similarity=0.497  Sum_probs=13.6

Q ss_pred             CceeEEeCCcEEeccC
Q psy13524        178 GEQGMIFRDLVEDLDE  193 (235)
Q Consensus       178 ~~~G~~P~~~v~~~~~  193 (235)
                      |+.|+||++|+++...
T Consensus         2 g~~G~~P~~yv~~~~~   17 (62)
T 1g2b_A            2 DRQGFVPAAYVKKLDS   17 (62)
T ss_dssp             CEEEEEEGGGEEECCC
T ss_pred             CCccccccceEeecCC
Confidence            6789999999998754

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=87.73  E-value=0.14  Score=42.73  Aligned_cols=37  Identities=19%  Similarity=0.256  Sum_probs=0.0

Q ss_pred             CCCCCCcCccccCCCChHHHHHhhccCCCeeEEeecc
Q psy13524        194 TIDPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISES  230 (235)
Q Consensus       194 ~~~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s  230 (235)
                      ++++++..+||||+|+|.+||++|.+..+|+||||+|
T Consensus       294 ~~~~~~~~~WyhG~isR~~AE~LL~~~~~G~FLVR~S  330 (373)
T 3hhm_B          294 DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRES  330 (373)
T ss_dssp             -------------------------------------
T ss_pred             ccccccCCCCcCCCCCHHHHHHHhccCCCCcEEEEec
Confidence            4567888999999999999999998888999999999

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=86.62  E-value=0.25  Score=36.39  Aligned_cols=33  Identities=33%  Similarity=0.598  Sum_probs=29.4

Q ss_pred             eEEEEEeecCeeEeee--------EEEcchhhhhhccccCC
Q psy13524         80 AIFRVTAVCGDFYIGG--------RQFDSLSDLISYYSSCS  112 (235)
Q Consensus        80 ~~~~l~~~~g~~~~g~--------~~f~~l~~lv~~~~~~~  112 (235)
                      .|++|....|.+.+++        ..|+++.+||++|...+
T Consensus        64 ~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~eLI~~y~~~~  104 (169)
T 2c9w_A           64 TNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMC  104 (169)
T ss_dssp             EEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHHT
T ss_pred             EEEEEEEeCCEEEEccccCccccCCCCCCHHHHHHHHHhCc
Confidence            7999999899999985        89999999999998754

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=83.18  E-value=0.77  Score=28.73  Aligned_cols=23  Identities=13%  Similarity=0.372  Sum_probs=20.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKG  156 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~g  156 (235)
                      ...++|+|+|.+ +.++||+|.+.
T Consensus        52 ~~~~~alydy~a-~~~dElsf~~~   74 (77)
T 2jmc_A           52 KELVLALYDYQE-SGDNAPSYSPP   74 (77)
T ss_dssp             CCEEEESSCCCC-SSCCCCCSCCC
T ss_pred             CceEEECCCcCC-CCCCccccCCC
Confidence            368999999999 89999999864

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=80.91  E-value=1.5  Score=35.35  Aligned_cols=32  Identities=16%  Similarity=0.080  Sum_probs=27.3

Q ss_pred             ccccCCCChHHHHHhhcc--CCCeeEEeeccCCC
Q psy13524        202 DWFHPECTKNDAVDMLVK--AGPVNFTISESDST  233 (235)
Q Consensus       202 ~w~~~~~~r~~ae~~l~~--~~~g~fliR~s~~~  233 (235)
                      +-|.+-+|=.+|.+.|..  +.+|+|++|.|.++
T Consensus       244 pGy~aFlTydEv~~~L~~~~~kpGsYIfR~ScTr  277 (329)
T 3bux_B          244 PGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTR  277 (329)
T ss_dssp             TTBCTTCCHHHHHHHHGGGTTSTTEEEEEECSSS
T ss_pred             cchhheeeHHHHHHHHHHhcCCCCcEEEEeccCc
Confidence            446668999999999998  55999999999775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	235
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	3e-11
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	2e-07
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	4e-11
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	5e-11
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	0.002
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	9e-11
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	6e-06
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	1e-10
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	1e-10
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	2e-09
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	2e-10
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	0.001
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	3e-10
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	3e-04
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	7e-10
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	2e-09
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	3e-09
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	2e-05
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	3e-09
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	1e-06
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	3e-09
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	4e-09
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	5e-09
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	2e-05
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	3e-08
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	3e-08
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	3e-08
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	2e-04
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	5e-08
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	5e-08
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	7e-08
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	7e-08
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	8e-08
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	8e-08
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-07
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	1e-07
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	1e-07
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	2e-07
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	2e-07
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	3e-07
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	5e-07
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	6e-07
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	7e-07
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	7e-07
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	8e-07
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	8e-07
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	9e-07
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	2e-05
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	9e-07
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-06
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	1e-06
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	1e-06
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	1e-06
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	1e-06
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	2e-06
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	2e-06
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	2e-06
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	3e-06
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	5e-06
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	3e-05
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	7e-06
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	8e-06
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	4e-05
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	8e-06
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	9e-06
d1ue9a_	80	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-05
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-05
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	1e-05
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	1e-05
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	1e-05
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	2e-05
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	2e-05
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-05
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	2e-05
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	3e-05
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	3e-05
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	5e-05
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	6e-05
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	7e-05
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	9e-05
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	3e-04
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	3e-04
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	7e-04
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	0.001
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	0.001
d1i1ja_	106	b.34.2.1 (A:) Melanoma inhibitory activity protein	0.001
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	0.002
d1kjwa1	96	b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicu	0.003
d1t0ha_	96	b.34.2.1 (A:) SH3-like domain of the L-type calciu	0.003

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 3e-11
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-VRYLMGGRTFECLDAVINRYRKEQIV 59
          SFL RPS ++PGD +L    N  +   +I+       L GG  F  L  ++  Y +    
Sbjct: 27 SFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQ 86

Query: 60 EGHTLGFPVT 69
               G  + 
Sbjct: 87 LKEKNGDVIE 96

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 2e-07
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 6/57 (10%)

Query: 82  FRVTAVCGDFYI-GGRQFDSLSDLISYYSSCSDLLKRE-----RLAHPCPPPEPVND 132
            ++      + + GG +F +L++L+ YY      LK +      L +P    +P ++
Sbjct: 53  IKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSE 109

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.8 bits (132), Expect = 4e-11
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNE-LGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
           +++  I P+T   +   L+F +GD+  +      DGWL+     T  +G       + L 
Sbjct: 8   QKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLS 67

Query: 193 E 193
            
Sbjct: 68  G 68

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.7 bits (134), Expect = 5e-11
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-VRYLMGGRTFECLDAVINRYRKEQIV 59
           F++R S +SPGD+S+     + +Q F++ +     Y +    F  L+ +++ YR   I 
Sbjct: 29 FFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSIS 88

Query: 60 EGHTL 64
          +   +
Sbjct: 89 KQKQV 93

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 89  GDFYIGGRQFDSLSDLISYYSSCS 112
           G++++   +F SL+ L+ YY + S
Sbjct: 63  GNYFLWTEKFPSLNKLVDYYRTTS 86

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 9e-11
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIV 59
           FLVR S   PGDY L       +  +R+  +     +     F  L  ++  Y K++  
Sbjct: 27 LFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGA 86

Query: 60 EGHTLGFPVTR 70
              L  P  +
Sbjct: 87 ICTKLVRPKRK 97

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 6e-06
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 82  FRVTAVCGDFYI-GGRQFDSLSDLISYYSSCSDLLKRERLAHPCP 125
           +RV    G   I     F +L D++ +YS     +   +L  P  
Sbjct: 53  YRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICT-KLVRPKR 96

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 1e-10
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 6/79 (7%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKK------AVRYLMGGRTFECLDAVINRYR 54
            FLVR S  +P  + L      +++ + I               G   F  L  ++  ++
Sbjct: 35  LFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQ 94

Query: 55  KEQIVEGHTLGFPVTRINL 73
             + +    L    TR+ L
Sbjct: 95  LNRGILPCLLRHCCTRVAL 113

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.0 bits (132), Expect = 1e-10
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FLVR  +  P  Y++ F    +I+  R++++    ++G   F+ L  +I+ Y K  +  
Sbjct: 33  AFLVRKRN-EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYR 91

Query: 61  GHTLGFPVTRIN 72
              L +P+   N
Sbjct: 92  KMKLRYPINEEN 103

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.2 bits (122), Expect = 2e-09
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEP 129
            RV        +G  +FDSL DLISYY       K  +L +P      
Sbjct: 58  CRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYRK-MKLRYPINEENS 104

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 2e-10
 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-RYLMGGRTFECLDAVINRYRKEQIV 59
          +FL+R S+++PGD+SL     N +Q F++ +    +Y +    F  L+ +++ +R   + 
Sbjct: 27 AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS 86

Query: 60 EGHTL 64
              +
Sbjct: 87 RNQQI 91

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (81), Expect = 0.001
 Identities = 8/31 (25%), Positives = 19/31 (61%)

Query: 88  CGDFYIGGRQFDSLSDLISYYSSCSDLLKRE 118
            G +++   +F+SL++L+ Y+ S S    ++
Sbjct: 60  AGKYFLWVVKFNSLNELVDYHRSTSVSRNQQ 90

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 3e-10
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 5/75 (6%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV- 59
            FLVR S  +PG Y L    + Q +   +             FE +  +I+ +    +  
Sbjct: 28  DFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPI 87

Query: 60  ----EGHTLGFPVTR 70
                   L  PV R
Sbjct: 88  ISAGSELCLQQPVER 102

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 4/48 (8%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLK----RERLAHPCP 125
             +    G       +F+S+S LISY+      +        L  P  
Sbjct: 54  LLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVE 101

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 7e-10
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLM------GGRTFECLDAVINRYR 54
            FL+R S ++P  + L    + +I+ F+I               G   F  L  +++ Y+
Sbjct: 30  LFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQ 89

Query: 55  KEQIVEGHTLGFPVTR 70
             + V    L     R
Sbjct: 90  LNKGVLPCKLKHHCIR 105

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (120), Expect = 2e-09
 Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED 190
           ++ K++VA+  Y    + ++L  +KGD +F+  E    W W    + G++G I  + V +
Sbjct: 6   SELKKVVALYDYMP-MNANDLQLRKGDEYFILEESNLPW-WRARDKNGQEGYIPSNYVTE 63

Query: 191 LDET 194
            +++
Sbjct: 64  AEDS 67

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 3e-09
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
            FL+R    S G Y L    + +   F IE++      + GG+       +   Y ++  
Sbjct: 31  LFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPD 90

Query: 59  VEGHTLGFPVTR 70
                L  P  R
Sbjct: 91  GLPCNLRKPCNR 102

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 88  CGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPVNDKKRIVAIL 140
                 GG+     ++L  +YS   D L    L  PC  P  +  +  +   L
Sbjct: 65  GTYAIAGGKAHCGPAELCEFYSRDPDGLPC-NLRKPCNRPSGLEPQPGVFDCL 116

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-09
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
          +FL+R S+    DY L       ++ ++I ++A    +L    +F  L  ++N +R + +
Sbjct: 27 AFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSL 86

Query: 59 VEGHTLGFPVTR 70
            G  L  P  +
Sbjct: 87 SHGLRLAAPCRK 98

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 91  FYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPE 128
                  F SL +L++Y+ + S      RLA PC   E
Sbjct: 64  HLNEAVSFLSLPELVNYHRAQSLSHG-LRLAAPCRKHE 100

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-09
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-------VRYLMGGRTFECLDAVINRY 53
           S+L+R S++ PG Y L    +  I  +R+ +             +  R F  +  +I+ +
Sbjct: 28  SYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAF 87

Query: 54  RKEQIVEGHTLGFPVTR 70
           +K        L +PV +
Sbjct: 88  QKPDQGIVIPLQYPVEK 104

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 4e-09
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 19/88 (21%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA------------------VRYLMGGRT 42
            FLVR S  SPGDY L    N+++  + I                       R  +G + 
Sbjct: 23  VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQE 82

Query: 43  FECLDAVINRYRKEQIVEGHTLGFPVTR 70
           F+ L A++  Y+   + +  TL  PV+R
Sbjct: 83  FDSLPALLEFYKIHYL-DTTTLIEPVSR 109

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 5e-09
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIV 59
           FLVR S N PGDY+L      +++ +RI   A +  +     FE L  ++  Y  +   
Sbjct: 27 LFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADG 86

Query: 60 EGHTLGFPVTR 70
              L  P   
Sbjct: 87 LCTRLIKPKVM 97

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 2e-05
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 82  FRVTAVCGDFYI-GGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPV 130
           +R+        I     F++L  L+ +Y++ +D L   RL  P      V
Sbjct: 53  YRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLCT-RLIKPKVMEGTV 101

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (112), Expect = 3e-08
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
           VA+  Y       +L+F+KG+   + N     W    +  TG+ G I  + V   D 
Sbjct: 6   VALYDYESR-TETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 61

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
           SFLVR S++SPG  S+      ++  +RI   +    Y+     F  L  +++ +     
Sbjct: 28  SFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVAD 87

Query: 59  VEGHTLGFPVTRIN 72
               TL +P  + N
Sbjct: 88  GLITTLHYPAPKRN 101

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 1   SFLVRPS-DNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI 58
           +FLVR +     GDY+L        +  +I  +  +Y      TF  +  +IN YR E +
Sbjct: 34  TFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNSVVELINHYRNESL 93

Query: 59  VEGH-----TLGFPVTR 70
            + +      L +PV++
Sbjct: 94  AQYNPKLDVKLLYPVSK 110

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 9/49 (18%), Positives = 20/49 (40%), Gaps = 5/49 (10%)

Query: 82  FRVTAVCGDFYIGGRQ-FDSLSDLISYYSSCSDLLKRE----RLAHPCP 125
            ++    G +       F+S+ +LI++Y + S          +L +P  
Sbjct: 61  IKIFHRDGKYGFSDPLTFNSVVELINHYRNESLAQYNPKLDVKLLYPVS 109

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 5e-08
 Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 49/125 (39%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           SFL+R S+++ G +SL     +Q Q                        +  Y+   +  
Sbjct: 29  SFLIRESESTAGSFSLSVRDFDQNQGEV---------------------VKHYKIRNLDN 67

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
           G                             +      F  L +L+ +Y++ SD L   RL
Sbjct: 68  GGF---------------------------YISPRITFPGLHELVRHYTNASDGLCT-RL 99

Query: 121 AHPCP 125
           + PC 
Sbjct: 100 SRPCQ 104

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (110), Expect = 5e-08
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           K   A+  Y      DE++F+ GD       + +GW++ T  RTG  GM+  + VE +
Sbjct: 4   KIFRAMYDYMAADA-DEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI 60

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 7e-08
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           VA+  Y  +   D+L+F KG+ F + N     W    +  TGE G I
Sbjct: 4   VALYDYEAI-TEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYI 49

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 7e-08
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 15/83 (18%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-----------YLMGGRTFECLDAV 49
           SFLVR S + PGD+ L     +        K  V             + GG  F+ L  +
Sbjct: 24  SFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDL 83

Query: 50  INRYRKEQIVE----GHTLGFPV 68
           +  Y+K  +VE       L  P+
Sbjct: 84  VEHYKKNPMVETLGTVLQLKQPL 106

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (109), Expect = 8e-08
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
           +  +VA+  Y  +   ++L+FQKGD   V  E    W    +  T ++G I  + V  +D
Sbjct: 4   RIIVVALYDYEAI-HHEDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVD 61

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 8e-08
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
             PEP    +  VAI  YT + + DE++  +G+   V ++L DGW  +   +    G   
Sbjct: 6   EDPEPNYAGEPYVAIKAYTAV-EGDEVSLLEGEAVEVIHKLLDGWWVIR--KDDVTGYFP 62

Query: 185 RDLVEDLDETIDPNT 199
              ++   + +    
Sbjct: 63  SMYLQKSGQDVSQAQ 77

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 1e-07
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIF 184
           P   PV    +++A+  Y    + DEL+F KG +  V N+    W        G  G+  
Sbjct: 29  PAFHPV---CQVIAMYDYAAN-NEDELSFSKGQLINVMNKDDPDWWQ--GEINGVTGLFP 82

Query: 185 RDLVEDLDETIDPNT 199
            + V+   ++  P++
Sbjct: 83  SNYVKMTTDSSGPSS 97

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.1 bits (109), Expect = 1e-07
 Identities = 9/55 (16%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYR 54
           F++R S+  PG+  L F+   + +  R+         +    F+ +  ++  + 
Sbjct: 31 LFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHFH 85

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 1e-07
 Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGG--------RTFECLDAVINR 52
           +FL+R S +S    ++    +      RIE +  ++ +          + F+ +  +I+ 
Sbjct: 38  TFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDY 97

Query: 53  YRKE 56
           Y + 
Sbjct: 98  YVQM 101

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGR-----TFECLDAVINRYRK 55
           +FL+R S      +S+ F   ++    RIE+    +              +  ++  Y+ 
Sbjct: 34  TFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKD 93

Query: 56  EQIVE--GHTLGFPVTR 70
                     L  P+ R
Sbjct: 94  PSACMFFEPLLSTPLIR 110

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-07
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 49/125 (39%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           SF++R S+ + G YSL     +  Q   ++                      Y+   +  
Sbjct: 26  SFMIRDSETTKGSYSLSVRDYDPRQGDTVK---------------------HYKIRTLDN 64

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERL 120
           G                             +      F +L +L+ +Y   +D L  ++L
Sbjct: 65  GGF---------------------------YISPRSTFSTLQELVDHYKKGNDGLC-QKL 96

Query: 121 AHPCP 125
           + PC 
Sbjct: 97  SVPCM 101

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.0 bits (104), Expect = 3e-07
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
            A   Y    D +ELTF + D       + D W      + G +G+   + V   +
Sbjct: 4   TAEYDYDAAED-NELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN 58

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.6 bits (105), Expect = 5e-07
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY--LMGGRTFECLDAVINRYRKEQI 58
           +FLVR S    G Y+    ++ +++   I K A  Y        +  L  ++  Y+   +
Sbjct: 32  TFLVRESSK-QGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSL 90

Query: 59  VEGH-----TLGFPV 68
           V+ +     TL +PV
Sbjct: 91  VQHNDSLNVTLAYPV 105

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (103), Expect = 6e-07
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED 190
           + +  + A   + +  + DEL+  KGDI +V      GW   T    G  G    + V +
Sbjct: 8   SHQLIVKARFNFKQT-NEDELSVCKGDIIYVTRVEEGGWWEGT--LNGRTGWFPSNYVRE 64

Query: 191 LDET 194
           +  +
Sbjct: 65  IKSS 68

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.2 bits (102), Expect = 7e-07
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           + VA+  +    ++ +L F+KGD+  +  +      W T    G +G+   + VE
Sbjct: 3   KAVALYSFAGE-ESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVE 56

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (103), Expect = 7e-07
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 5/69 (7%)

Query: 126 PPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFR 185
            P     K  + A+  Y      DELTF K  I     +   GW W   +   +Q     
Sbjct: 2   SPTF---KCAVKALFDYKAQ-REDELTFIKSAIIQNVEKQEGGW-WRGDYGGKKQLWFPS 56

Query: 186 DLVEDLDET 194
           + VE++   
Sbjct: 57  NYVEEMVNP 65

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.3 bits (104), Expect = 8e-07
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA-------VRYLMGGRTFECLDAVINRY 53
           +FL+R S++ PG   L       +  +RI ++                 F  L  ++++Y
Sbjct: 27  NFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKY 86

Query: 54  RKEQIVEGHTLGFPVTR 70
            K        L  P+ R
Sbjct: 87  GKPGQGLVVHLSNPIMR 103

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (102), Expect = 8e-07
 Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
           +A   +    +  +L F KGD+  +     D   +   ++ G +G+I  + V+  + 
Sbjct: 10  IAKYNFHGTAE-QDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG 65

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 9e-07
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
            +L+R S N  G ++L      +   + IE++      + GGRT      + + + +E  
Sbjct: 30  LYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESD 89

Query: 59  VEGHTLGFPVTR 70
                L  P  R
Sbjct: 90  GLVCLLKKPFNR 101

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 94  GGRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPEPV 130
           GGR   S +DL  Y+S  SD L    L  P   P+ V
Sbjct: 70  GGRTHASPADLCHYHSQESDGLVC-LLKKPFNRPQGV 105

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 9e-07
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 130 VNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           +    ++ A+  Y      ++L FQ+GDI  V +++ + WL   +   G+ G+  +  VE
Sbjct: 2   LKKGSQVEALFSYEATQP-EDLEFQEGDIILVLSKVNEEWLEGESK--GKVGIFPKVFVE 58

Query: 190 DL 191
           D 
Sbjct: 59  DS 60

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
               A+ P+    + DE++F  GDI  V  +      W+     G  G    + VE +  
Sbjct: 6   SGYRALYPFEAR-NHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPS 64

Query: 194 TIDPNTV 200
           + +   V
Sbjct: 65  SENEKAV 71

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           + K + A+  +    ++ EL F++GD+  + N+    W          +G+   + V   
Sbjct: 1   ETKFVQALFDFNPQ-ESGELAFKRGDVITLINKDDPNWWEGQ--LNNRRGIFPSNYVCPY 57

Query: 192 D 192
           +
Sbjct: 58  N 58

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 5/74 (6%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDT-----DELTFQKGDIFFVHNELGDGWLWVTAHRTGE 179
                       VA   Y            EL    G   +V+ ++ +   +      G+
Sbjct: 9   SKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQ 68

Query: 180 QGMIFRDLVEDLDE 193
           +G++  + V+ + +
Sbjct: 69  RGLVPSNFVDFVQD 82

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 29/126 (23%), Positives = 41/126 (32%), Gaps = 51/126 (40%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVE 60
           +FLVR S+ + G Y L     +  +   ++   +R L  G                    
Sbjct: 30  TFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGG------------------- 70

Query: 61  GHTLGFPVTRINLGIFIPSAIFRVTAVCGDFYIGGR-QFDSLSDLISYYSSCSDLLKRER 119
                                         FYI  R QF+SL  L++YYS  +D L   R
Sbjct: 71  ------------------------------FYITSRTQFNSLQQLVAYYSKHADGLCH-R 99

Query: 120 LAHPCP 125
           L   CP
Sbjct: 100 LTTVCP 105

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 42.4 bits (100), Expect = 1e-06
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           + ++A+  Y +     E+T +KGDI  + N     W          QG +    V+ L
Sbjct: 1   ELVLALYDYQEK-SPREVTMKKGDILTLLNSTNKDWWK--VEVNDRQGFVPAAYVKKL 55

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (99), Expect = 2e-06
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           P  + +     ++A+  Y       +L F+KG+   +  + G+ W    +  TG++G I
Sbjct: 3   PLQDNL-----VIALHSYEPS-HDGDLGFEKGEQLRILEQSGEWW-KAQSLTTGQEGFI 54

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 6/77 (7%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR------YLMGGRTFECLDAVINRYR 54
           SFL+R S+++ G +SL               K         Y+    TF  L A++  Y 
Sbjct: 37  SFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYS 96

Query: 55  KEQIVEGHTLGFPVTRI 71
           K+       L  P   +
Sbjct: 97  KKGDGLCQKLTLPCVNL 113

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 6/60 (10%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECL-----DAVINRYRK 55
           ++++R S   PG Y+L     NQ   +R+      + +G + FE +     D +I  Y +
Sbjct: 57  AYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHF-VGEKRFESIHDLVTDGLITLYIE 115

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (98), Expect = 3e-06
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
           ++  A+       D  EL+F  G +F   +   +   W+     G+ G+I  + VE L  
Sbjct: 11  RKAKALYACKAEHD-SELSFTAGTVFDNVHPSQEPG-WLEGTLNGKTGLIPENYVEFLSG 68

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRYRKEQI 58
            FL+RP     G Y+L       +  + I +       +  G  F+ L  ++   + +  
Sbjct: 54  KFLLRPRK-EQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKAD 112

Query: 59  VEGHTLGFPV 68
              + L    
Sbjct: 113 GLIYCLKEAC 122

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 82  FRVTAVCGDFYI--GGRQFDSLSDLISYYSSCSDLLKRERLAHPCP 125
           + ++      Y    G +FD+L  L+ Y    +D L    L   CP
Sbjct: 79  YLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIY-CLKEACP 123

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.6 bits (95), Expect = 7e-06
 Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE 193
           + +VA+  +    +  +L  ++G  + +  +    W W    + G +G I  + V     
Sbjct: 3   EIVVAMYDFQAT-EAHDLRLERGQEYIILEKNDLHW-WRARDKYGSEGYIPSNYVTGKKS 60

Query: 194 T 194
            
Sbjct: 61  N 61

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 8e-06
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 89  GDFYIGG--RQFDSLSDLISYYSSCSDLLKRERLAHPCPPPE 128
           G F I G      SL  L++++       +RE L  PC   +
Sbjct: 65  GTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELLTQPCRQKD 106

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 4e-05
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 1   SFLVRPSDNSPGDYSLFFHINNQIQ--RFRIEKKAVRYLMGGR-TFECLDAVINRYRKEQ 57
           SFL+R S +  G Y+L +   +       ++       + G +     LDA++  ++++ 
Sbjct: 32  SFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKP 90

Query: 58  I-VEGHTLGFPVTR 70
           I      L  P  +
Sbjct: 91  IEPRRELLTQPCRQ 104

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 8e-06
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           + + A+  +    D ++L F+KGDI  + ++  + W W      G++GMI    VE
Sbjct: 2   EYVRALFDFNGN-DEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVE 55

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (93), Expect = 9e-06
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
           VA+  +    D + L+  KG+   V     +G  W  A     QG +  + +  ++
Sbjct: 4   VALYDFVASGD-NTLSITKGEKLRVLGYNHNGE-WCEAQTKNGQGWVPSNYITPVN 57

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 1e-05
 Identities = 8/69 (11%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH---RTGEQGMIFRDLVED 190
           +       Y     +++L+   G +  +  +   GW         +  ++G      V+ 
Sbjct: 8   EIAQVTSAYVAS-GSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKL 66

Query: 191 LDETIDPNT 199
           L  + +  +
Sbjct: 67  LGPSSERAS 75

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 1e-05
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
           +  +A+ PY+ + +  +LTF +G+   V  + G+ W           G+   + V+  D
Sbjct: 9   EEYIALYPYSSV-EPGDLTFTEGEEILVTQKDGEWWTGS---IGDRSGIFPSNYVKPKD 63

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           +R+ A+  +  + + +ELTF+ G++  V ++    W           G+   + V 
Sbjct: 3   RRVRALYDFEAV-EDNELTFKHGELITVLDDSDANWWQGE--NHRGTGLFPSNFVT 55

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
            A+  +    +  EL F++GD   V +     W        G+ GM  R+ V  +
Sbjct: 5   QALFDFDPQ-EDGELGFRRGDFIHVMDNSDPNWWKGA--CHGQTGMFPRNYVTPV 56

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 1e-05
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE 189
           +A   +      DEL+F++GDI  V NE  D   W  A   G+ G I ++ +E
Sbjct: 4   IAKYDFKAT-ADDELSFKRGDILKVLNEECDQN-WYKAELNGKDGFIPKNYIE 54

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 130 VNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-GDGWLWVTAHRTGEQGMIFRDLV 188
           + +K  I A+  Y    + DEL  ++GD   + +    D   W  A    ++G + R+L+
Sbjct: 1   IMNKGVIYALWDYEPQ-NDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLL 59

Query: 189 E 189
            
Sbjct: 60  G 60

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 2e-05
 Identities = 7/64 (10%), Positives = 20/64 (31%), Gaps = 3/64 (4%)

Query: 131 NDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWL--WVTAHRTGEQGMIFRDLV 188
              +   A+  +    + +EL+        +           W  A   G++G +  + +
Sbjct: 11  EGNQVYFAVYTFKAR-NPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYI 69

Query: 189 EDLD 192
              +
Sbjct: 70  RKTE 73

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           +  +  A+  +T     + L F K DI  V  E  + W +      G +G   +  V+ +
Sbjct: 9   ENLKAQALCSWTAK-KDNHLNFSKHDIITVL-EQQENWWF--GEVHGGRGWFPKSYVKII 64

Query: 192 DET 194
             +
Sbjct: 65  PGS 67

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 1   SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKA--VRYLMGGRTFECLDAVINRY 53
           +FL+R S+ + G YSL          + ++ ++I K      Y+     FE L  ++  Y
Sbjct: 31  TFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHY 90

Query: 54  RKEQIVEGHTLGFP 67
            +        L  P
Sbjct: 91  SERAAGLSSRLVVP 104

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.5 bits (90), Expect = 3e-05
 Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
           +   A+  +  + + DEL F+ G++  V +     W     H   + G+   + V  +
Sbjct: 2   RWARALYDFEAL-EEDELGFRSGEVVEVLDSSNPSWWTGRLH--NKLGLFPANYVAPM 56

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (90), Expect = 3e-05
 Identities = 12/57 (21%), Positives = 15/57 (26%), Gaps = 2/57 (3%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHN-ELGDGWLWVTAHRTGEQGMIFRDLVE 189
           +    I P         L    GDI  +   E    W       T E G    + V 
Sbjct: 11  QEYYGIPPPPGA-FGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVH 66

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (88), Expect = 5e-05
 Identities = 9/61 (14%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
           KK   +   +    ++ EL+  K D+  + ++    W     + +G+ G +  ++++ + 
Sbjct: 1   KKYAKSKYDFVAR-NSSELSVMKDDVLEILDDRRQWWKVR--NASGDSGFVPNNILDIMR 57

Query: 193 E 193
            
Sbjct: 58  T 58

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 6e-05
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 82  FRVTAVCGDFYIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCP 125
                        G++FD+L  L+ +YS  +D L    L  PC 
Sbjct: 81  IDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLL-RVLTVPCQ 123

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (90), Expect = 7e-05
 Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 11/77 (14%)

Query: 2   FLVRPSDNSPGDYSLFFHINNQIQRFRIEK----------KAVRYLMGGRTFECLDAVIN 51
           F+VR S  +PG Y++       I      K              Y+     F+ +  +I 
Sbjct: 31  FMVRDSR-TPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQ 89

Query: 52  RYRKEQIVEGHTLGFPV 68
            ++         L +PV
Sbjct: 90  YHQYNGGGLVTRLRYPV 106

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (87), Expect = 9e-05
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 134 KRIVAILPYTKMPDTDELTFQKGDIFFVHN--ELGDGWLWVTAHRTGEQGMIFRDLVEDL 191
             +  + P++ +   +EL F+KG+   V    E    W W   +  G+ G++ ++ V  L
Sbjct: 7   HVVQTLYPFSSV-TEEELNFEKGETMEVIEKPENDPEW-WKCKNARGQVGLVPKNYVVVL 64

Query: 192 DET 194
            + 
Sbjct: 65  SDG 67

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.0 bits (83), Expect = 3e-04
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNE-----LGDGWLWVTAHRTGEQGMIFRDLVE 189
            A+  +       E+  +KGD+  + ++         W W    + G  G I  + +E
Sbjct: 9   RALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDW-WKVRTKNGNIGYIPYNYIE 65

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 37.6 bits (87), Expect = 3e-04
 Identities = 7/53 (13%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 1  SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRY 53
          +F++R S+ +PG + + +       R +     V+        +     ++ +
Sbjct: 32 TFIIRFSERNPGQFGIAYIGVEMPARIKHYL--VQPNDTAAAKKTFPDFLSEH 82

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 34.5 bits (79), Expect = 7e-04
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMI 183
           +A+  Y    D  EL  +  + +++ +     W W    + G +G  
Sbjct: 2   IALYDYQTN-DPQELALRCDEEYYLLDSSEIHW-WRVQDKNGHEGYA 46

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.1 bits (78), Expect = 0.001
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 138 AILPYTKMPDTDELTFQKGDIFFV-HNELGDGWLWVTAHRTGEQGMIFRDLVE 189
            +  Y +  D DE+T   GD   +   + G GW  +    TGE G++    + 
Sbjct: 4   VLYAYVQK-DDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR 55

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 14/77 (18%)

Query: 129 PVNDKKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-----GDGWL--------WVTAH 175
           P     ++ A   YT   DTDEL  + GD+  V          +GWL             
Sbjct: 8   PPGFMFKVQAQHDYTAT-DTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKE 66

Query: 176 RTGEQGMIFRDLVEDLD 192
               +G+   +  E + 
Sbjct: 67  LEKCRGVFPENFTERVQ 83

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 13/82 (15%), Positives = 22/82 (26%), Gaps = 10/82 (12%)

Query: 124 CPPPEPVNDKKRIVAILPYTKMPDTDELTFQKGDIFFV---HNELGDGWLWVTAH----- 175
           C   E  +     VA+  Y    D   LT  +G + +V       G  +   +       
Sbjct: 12  CADQECSHPISMAVALQDYMAP-DCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYG 70

Query: 176 -RTGEQGMIFRDLVEDLDETID 196
                 G     +V +      
Sbjct: 71  DLAARLGYFPSSIVREDQTLKP 92

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (77), Expect = 0.002
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 137 VAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD 192
            AI  Y K     E+    GD+  V  +  +   W       ++G I    +E LD
Sbjct: 6   RAIADYEKT-SGSEMALSTGDVVEVVEK-SESGWWF-CQMKAKRGWIPASFLEPLD 58

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 8/73 (10%)

Query: 136 IVAILPYTKMPDT----DELTFQKGDIFFVHNELGDGWLWV----TAHRTGEQGMIFRDL 187
           I A+  Y K  D       L+F+ GD+  V +   + W       +   T + G I    
Sbjct: 4   IRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKR 63

Query: 188 VEDLDETIDPNTV 200
             +  E       
Sbjct: 64  RVERREWSRLKAK 76

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 9/66 (13%)

Query: 125 PPPEPVNDKKRIVAILPYTKMPDTD------ELTFQKGDIFFVHNELGDGWLWVTAHRT- 177
              +PV     +   + Y+   + D       ++F+  D   V  +  + W      +  
Sbjct: 15  AKTKPV--AFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEG 72

Query: 178 GEQGMI 183
            E G I
Sbjct: 73  CEIGFI 78

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	235
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.79
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.77
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.76
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.75
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.74
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.74
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.72
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.71
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.71
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.71
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.7
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.7
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.68
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.68
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.68
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.67
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.66
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.66
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.66
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.65
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.65
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.65
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.64
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.64
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.63
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.63
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.63
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.62
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.62
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.62
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.61
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.61
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.61
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.6
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.59
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.59
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.58
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.58
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.58
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.58
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.58
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.57
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.57
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.57
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.57
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.56
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.55
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.55
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.55
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.55
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.54
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.54
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.53
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.53
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.53
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.53
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.52
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.52
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.52
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.51
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.5
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.5
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.5
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.5
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.5
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.49
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.48
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.48
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.47
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.44
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.44
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.43
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.42
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.42
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.4
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.34
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.33
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.33
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.22
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.17
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.16
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.14
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	99.14
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.13
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.13
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.12
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.1
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.1
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.1
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.09
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.09
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.08
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.08
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.07
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.07
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.06
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.06
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.04
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.03
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.02
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.02
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.02
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.02
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	98.99
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	98.97
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	98.96
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	98.96
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	98.96
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	98.92
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	98.29
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	98.09
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	96.7
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	96.55
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	96.12
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	91.98
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	88.74

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.7e-19  Score=121.88  Aligned_cols=70  Identities=24%  Similarity=0.373  Sum_probs=65.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.+++|+||+|.+.+++| +.++..|+||.+||+||+++++++.++|..||+|
T Consensus        27 ~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~L~~~L~~P~~k   97 (97)
T d1jwoa_          27 LFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRK   97 (97)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEESSSEESSTTSCCBSCHHHHHHHHHHCCTTSSSCCCCBCCC
T ss_pred             eEEEEecCCCCccEEEEEEecCceEEEEEEEcCCcEEecCCcccCCHHHHHHHHhhCCCCCCccCCccCcC
Confidence            699999999999999999999999999998877776 7778899999999999999999999999999975

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.6e-19  Score=121.74  Aligned_cols=70  Identities=24%  Similarity=0.432  Sum_probs=64.8

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+|||+.+++|+||+|.+..++ | +.+...|+||.+||+||+.+++++.++|..||++
T Consensus        27 ~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~~~~~L~~Pc~~   98 (100)
T d1rjaa_          27 AFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLAAPCRK   98 (100)
T ss_dssp             CEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             eEEeecCCCCCCCEEEEEEcCCCceEEEEEECCCCCEEecCCCccCCHHHHHHHHhhCCCCCccCcCeecCC
Confidence            69999999999999999999999999999886655 5 7778899999999999999999999999999987

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.5e-19  Score=119.85  Aligned_cols=70  Identities=29%  Similarity=0.391  Sum_probs=65.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.+++|+||+|...+++| +.++..|+||.|||+||+++++++.+.|..||++
T Consensus        27 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~gl~~~L~~P~~~   97 (101)
T d1k9aa2          27 LFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIKPKVM   97 (101)
T ss_dssp             EEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHHHCCTTSSSCCCEECCC
T ss_pred             CEEEeccCCCCCCEEEEEEeCCccEEEEEEEcCCCceecCCcccCCHHHHHHHHhhCCCCCceeCCccccC
Confidence            599999999999999999999999999999888885 6677899999999999999999999999999986

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.1e-18  Score=122.34  Aligned_cols=70  Identities=24%  Similarity=0.344  Sum_probs=64.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.+++|+||+|.+..++ | +.++..|+||.+||+||+.+++++.++|..||++
T Consensus        31 ~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~~Y~~~~~gL~~~L~~P~~r  102 (130)
T d2oq1a1          31 LFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNR  102 (130)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHCCTTSSSCCCSBCCC
T ss_pred             eEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCHHHHHHHHhhCCCCCCccCCccCCC
Confidence            69999999999999999999999999999887665 6 5567789999999999999999999999999987

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.4e-18  Score=121.69  Aligned_cols=70  Identities=24%  Similarity=0.327  Sum_probs=64.4

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.+++|+||+|.+..++ | +.++..|+||.|||+||+.+++++.+.|..||++
T Consensus        30 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~~Y~~~~~gl~~~L~~P~~~  101 (129)
T d1a81a1          30 LYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNR  101 (129)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTCCTTSSSCCCEECCC
T ss_pred             cEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCHHHHHHHHhhCCCCCcccCCCCCCC
Confidence            59999999999999999999999999999887665 5 6667799999999999999999999999999976

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=2.4e-18  Score=117.21  Aligned_cols=70  Identities=24%  Similarity=0.390  Sum_probs=64.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+|||+.++.|+||+|.+..++ | +.++..|+||.|||+||+.+++++.+.|..||+|
T Consensus        28 ~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~L~~P~pr   99 (101)
T d1opka2          28 SFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPK   99 (101)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTCCTTSSSCCCEECCC
T ss_pred             eEEEEecCCCCCCEEEEEEcCcceEEEEeEECCCCCEEeCCCcccCCHHHHHHHHhhCCCCCceECCCccCC
Confidence            59999999999999999999999999999887665 5 5667789999999999999999999999999987

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.72  E-value=2.9e-18  Score=117.24  Aligned_cols=69  Identities=25%  Similarity=0.594  Sum_probs=63.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|. .+|.|+|||+.+++|+||+|.+.+..|..+...|+||.|||+||+++++++.+.|..||++
T Consensus        33 ~FLVR~S~-~~~~yvLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~~L~~P~~~  101 (105)
T d2fcia1          33 AFLVRKRN-EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYRKMKLRYPINE  101 (105)
T ss_dssp             CEEEEECS-STTCEEEEEEETTEECCCEEBCCSSCEECSSSEESTTHHHHHHHHHSCCSTTCSSCCCCCC
T ss_pred             eEEEEecC-CCCCEEEEEEeccccEEEEEEecCCeEecCCcccCCHHHHHHHHhhCCCCCccCCCCCCCC
Confidence            69999995 6899999999999999999987655588888999999999999999999999999999987

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=6.4e-18  Score=115.37  Aligned_cols=70  Identities=24%  Similarity=0.419  Sum_probs=61.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-Ec-----CCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LM-----GGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~-----~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.++.|+||+|.+..++ | +.     ....|+||.+||+||++++.++.+.|..||.|
T Consensus        27 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~gl~~~L~~P~~R  103 (103)
T d1i3za_          27 NFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHLSNPIMR  103 (103)
T ss_dssp             EEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSSSSSSSSCCCEECC-
T ss_pred             eEEEEecCCCCCCEEEEEEeCCeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHHHHHhhhCCCCCeEeCCccccC
Confidence            59999999999999999999999999999876655 5 32     23469999999999999999999999999975

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.3e-17  Score=113.98  Aligned_cols=70  Identities=23%  Similarity=0.453  Sum_probs=62.9

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+|||+.     ++.|+||+|...+++ | +.+...|+||.|||+||+.+++++.++|..||++
T Consensus        26 ~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~gL~~~L~~PC~~  102 (103)
T d1qcfa2          26 SFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCMS  102 (103)
T ss_dssp             CEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTSSCTTSSSCCCSBCCC
T ss_pred             cEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecCCcccCCHHHHHHHHhhCCCCCCccCCccCCC
Confidence            69999999999999999985     468999999887655 4 6677789999999999999999999999999986

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.8e-17  Score=113.62  Aligned_cols=70  Identities=21%  Similarity=0.285  Sum_probs=60.2

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe----EE-cC-CcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR----YL-MG-GRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~----~~-~~-~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+|||+.+++|+||+|....+.    |. .+ ...|+||.+||+||+++++++.+.|..||+|
T Consensus        30 ~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~L~~~L~~Pc~r  105 (105)
T d1nrva_          30 LFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCKLKHHCIR  105 (105)
T ss_dssp             EEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCCEECCC
T ss_pred             eEEEEeCCCCCCCEEEEEEECCceeEEEEEEecCCCeEEEEECCCCcccCCHHHHHHHhccCcCCCCccCCcCCCC
Confidence            59999999999999999999999999999875432    43 33 4589999999999999999999999999975

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.8e-17  Score=115.86  Aligned_cols=69  Identities=25%  Similarity=0.468  Sum_probs=62.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||.|+. +|.|+|||+.+++|+||+|.+.+++ | +.++..|+||.+||+||+.++.++.+.|..||+|
T Consensus        54 ~FLVR~S~~-~~~yvLSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI~~y~~~~~gL~~~L~~P~~k  124 (125)
T d1a81a2          54 KFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQK  124 (125)
T ss_dssp             CEEEEECSS-SSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTTCCTTSSSCCCCBCCC
T ss_pred             eEEEEecCC-CCCEEEEeeccccceeEeeeEcCCCcEeccCCcccCCHHHHHHHHhhCCCCCCccCCeeCCC
Confidence            699999865 7899999999999999999987665 6 5567789999999999999999999999999987

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.9e-17  Score=116.51  Aligned_cols=68  Identities=19%  Similarity=0.308  Sum_probs=61.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||.|++ +|.|+|||+.+++|+||+|.+..++ | +..+..|+||.+||+||+.+++++.++|..|||
T Consensus        54 tFLVR~S~~-~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~gL~~~L~~PcP  123 (124)
T d2oq1a2          54 KFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYCLKEACP  123 (124)
T ss_dssp             EEEEEECSS-TTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHHHHCCTTSSSCCCSBCC
T ss_pred             eEEeEecCC-CCCEEEEeecCCceEEEEEEECCCCCEEeCCCcccCCHHHHHHHHhhCCCCCcccCCCcCc
Confidence            599999975 7899999999999999999887655 6 556779999999999999999999999999997

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.4e-17  Score=112.46  Aligned_cols=70  Identities=24%  Similarity=0.297  Sum_probs=61.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCCcc-----cceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQIV-----EGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~~~-----~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||++++.|+||+|...++.|..++..|+||.|||+||+.+++.     ..+.|.+|+.|
T Consensus        28 ~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~~~~~~~L~~Pi~R  102 (104)
T d1mila_          28 DFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVER  102 (104)
T ss_dssp             EEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHHHTCCEEETTEEECCCEECCC
T ss_pred             cEEEEecCCCCCCEEEEEEEccccceEEEEeCCCEEEeCCeeECCHHHHHHHHhhCCCCcccCCcceEeCCCcCC
Confidence            59999999999999999999999999999776656877889999999999999997764     35678889876

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=6.2e-17  Score=110.80  Aligned_cols=70  Identities=24%  Similarity=0.447  Sum_probs=62.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EE------cCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YL------MGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~------~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+||++.++.|+||+|.+.+++ |.      .+...|+||.+||+||++++.++.+.|+.||+|
T Consensus        28 ~FLVR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~~Li~~y~~~~~gl~~~L~~P~~r  104 (104)
T d1d4ta_          28 SYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQYPVEK  104 (104)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSSSSSSSSCCCEECCC
T ss_pred             eEEEEecCCCCCCEEEEEecCCCceEEEEEEcCCCcEEEeeccCCCCcccCCHHHHHHHHhhCCCCCcEeCCccccC
Confidence            59999999999999999999999999999887665 42      235679999999999999999999999999975

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5.7e-17  Score=112.41  Aligned_cols=70  Identities=19%  Similarity=0.213  Sum_probs=60.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCC-e---E-EcC-CcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAV-R---Y-LMG-GRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~-~---~-~~~-~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|++.+|.|+|||+.+++|+||+|...++ +   | +.+ ...|+||.|||+||+++++++.+.|..||+|
T Consensus        35 ~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~L~~~L~~pc~r  110 (113)
T d2qmsa1          35 LFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRGILPCLLRHCCTR  110 (113)
T ss_dssp             EEEEEECSSCTTCEEEEEEETTEEEEEEEEEEESSSCEEEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCCEECCS
T ss_pred             cEEEEeccCCCCCEEEEEEeCCeEEEEEEEEeCCCCeEEEEecCCCcccCCHHHHHHHhccCCCCCccccCCCCcC
Confidence            5999999999999999999999999999976433 2   3 233 3479999999999999999999999999987

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.8e-17  Score=111.04  Aligned_cols=69  Identities=22%  Similarity=0.361  Sum_probs=61.1

Q ss_pred             CeEEeecCCCCCCEEEEEEECC-----EEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINN-----QIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~-----~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||+|++.+|.|+||++..+     .|+||+|...+++ | +.+...|+||.|||+||+++++++.++|..||+
T Consensus        29 tFLVR~S~~~~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~gL~~~L~~Pcp  104 (105)
T d1lkka_          29 SFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQ  104 (105)
T ss_dssp             CEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHHHHHHHCCTTSSSCCCSBCC
T ss_pred             cEEEEccCCCCCCEEEEEEEcccCCCccEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHhhCCCCCCccCCCcCC
Confidence            6999999999999999998743     4999999887655 5 666778999999999999999999999999996

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1e-16  Score=110.34  Aligned_cols=70  Identities=30%  Similarity=0.558  Sum_probs=61.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc------ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI------VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~------~~~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+|||+.+++|+||+|...+++| +.+...|+||.+||+||+.+++      ++.+.|++|+++
T Consensus        27 ~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~~~~~~~~L~~P~~~  103 (109)
T d2shpa2          27 SFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNC  103 (109)
T ss_dssp             EEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHHTCTTCSBSSSSCBCCCCEECCC
T ss_pred             eEEEEecCCCCCCEEEEEEeCCcEEEEEEEEcCCeEEEcCCcccCCHHHHHHHHHHCCCCcccCCCCeeeccccCCC
Confidence            599999999999999999999999999998877775 7788899999999999998765      345789999875

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=1.5e-16  Score=96.02  Aligned_cols=55  Identities=20%  Similarity=0.463  Sum_probs=51.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ +++++|+|.+||.|.|++..+++| |.++. +|+.|+||++||+++
T Consensus         2 ~yarAlydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~g~~-~g~~G~~P~~yve~i   56 (57)
T d1utia_           2 RWARALYDFEA-LEEDELGFRSGEVVEVLDSSNPSW-WTGRL-HNKLGLFPANYVAPM   56 (57)
T ss_dssp             CEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCC-CCcCCcCCCCCCEEEEeEEcCCCE-EEEEE-CCcEEEEEHHHEEEc
Confidence            57899999999 899999999999999999999999 99997 899999999999986

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.1e-16  Score=109.85  Aligned_cols=69  Identities=23%  Similarity=0.362  Sum_probs=61.3

Q ss_pred             CeEEeecCCCCCCEEEEEEEC-----CEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN-----NQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~-----~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||+|.+.+|.|+||++..     ..|+|++|.+.+++ | +.+...|+||.|||+||+++++++.++|..|||
T Consensus        30 ~FLVR~S~~~~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g~~~~~~~~~F~sl~eLV~~y~~~~~gL~~~L~~pcP  105 (106)
T d1o48a_          30 TFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCP  105 (106)
T ss_dssp             CEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHHHHHTTCCTTSSSCCCSBCC
T ss_pred             cEEEEcccCCCCCEEEEEEecccCcccceEEEEEEEecCCCEEEcCCeeECCHHHHHHHHhhCCCCCCccCCCcCC
Confidence            699999999999999999874     36899999887665 5 667779999999999999999999999999997

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.65  E-value=2e-16  Score=95.77  Aligned_cols=55  Identities=22%  Similarity=0.512  Sum_probs=51.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ .++++|+|.+||+|.|++..+++| |.++. +|+.|+||++||+++
T Consensus         3 ~~~~Alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yvep~   57 (58)
T d1sema_           3 KFVQALFDFNP-QESGELAFKRGDVITLINKDDPNW-WEGQL-NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCC-SSTTBCCBCTTCEEEEEECSSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECCCCCc-CCcCCcCCCCCCEEEEeEEcCCCE-EEEEE-CCeEEEEEhhhEEEC
Confidence            57899999999 899999999999999999999999 98987 899999999999986

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=5.4e-17  Score=112.82  Aligned_cols=70  Identities=26%  Similarity=0.427  Sum_probs=62.2

Q ss_pred             CeEEeecCCCCCCEEEEEEE----CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI----NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~----~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+|||+.    ++.|+||+|.+.+++ | +.+...|+||.|||+||+++++++.++|..||++
T Consensus        37 ~FLVR~S~~~~g~~~Lsv~~~~~~~~~v~H~~i~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~gL~~~L~~PC~~  112 (114)
T d1blja_          37 SFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKKGDGLCQKLTLPCVN  112 (114)
T ss_dssp             CEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHHHHHHHCCSSSSSCCCCCSCC
T ss_pred             eEEEeccCCCCCCeEEEEEeeccCCCEEEEEEEEEcCCCCEEecCCceECCHHHHHHHHhhCCCCCCccCCccCcC
Confidence            69999999999999999985    356999999987654 5 6677789999999999999999999999999986

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.2e-16  Score=94.95  Aligned_cols=55  Identities=27%  Similarity=0.615  Sum_probs=51.0

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ .++++|+|++||+|.|+++.+++| |.++. +|+.|+||++||+++
T Consensus         2 tyv~Alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_           2 TYVQALFDFDP-QEDGELGFRRGDFIHVMDNSDPNW-WKGAC-HGQTGMFPRNYVTPV   56 (56)
T ss_dssp             EEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCc-CCcCCcCCCCCCEEEEEEecCCCE-EEEEE-CCeEEEEEHhHEEEC
Confidence            36899999999 899999999999999999989999 99988 899999999999874

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.64  E-value=3.9e-16  Score=93.50  Aligned_cols=54  Identities=28%  Similarity=0.574  Sum_probs=50.5

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      .++|+|+|.+ +.+++|+|++||+|.|+++.+++| |.++. +|+.|+||++||+.+
T Consensus         2 ~~vAl~dy~~-~~~~eLs~~~Gd~v~v~~~~~~~W-w~g~~-~g~~G~~P~~yv~~i   55 (55)
T d1u06a1           2 LVLALYDYQE-KSPREVTMKKGDILTLLNSTNKDW-WKVEV-NDRQGFVPAAYVKKL   55 (55)
T ss_dssp             EEEECSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCC-CCcCCccCCCCCEEEEeEEcCCCE-EEEEE-CCeEEEEeHHHEEEC
Confidence            5799999999 899999999999999999999999 99987 899999999999864

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=3.5e-16  Score=94.42  Aligned_cols=55  Identities=29%  Similarity=0.657  Sum_probs=51.3

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ..++|+|+|.+ +++++|+|++||+|.|+.+.+++| |.++..+|+.|+||++||++
T Consensus         2 ~~v~Alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_           2 EYVRALFDFNG-NDEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CEEEESSCBCC-SSTTBCCBCTTCEEEEEECSSSSE-EEEECTTSCEEEEEGGGEEC
T ss_pred             CEEEECCCCCc-CCcCCcCCCCCCEEEEEEEcCCCe-EEEEECCCCEEEEcHHHeEE
Confidence            47899999999 899999999999999999999999 99987788999999999985

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.2e-16  Score=105.21  Aligned_cols=61  Identities=26%  Similarity=0.592  Sum_probs=55.5

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIVEG   61 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~~~   61 (235)
                      +||||+|.+.+|.|+|||+.++.|+||+|.+.+++ |..+...|+||.+||+||+++++...
T Consensus        27 ~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~~~~l~~~   88 (96)
T d1jyra_          27 AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRN   88 (96)
T ss_dssp             BEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTSSCSCSS
T ss_pred             eEEEEecCCCCCCEEEEEEeCCceEEEEEEECCCCeEEeCCccCCCHHHHHHHHhhCCCCCC
Confidence            69999999999999999999999999999988776 78888899999999999999987543

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=3.7e-16  Score=94.55  Aligned_cols=53  Identities=23%  Similarity=0.592  Sum_probs=50.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEE
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      .+++|+|+|.+ ..+++|+|++||+|.|++..+++| |.++. +|+.|+||++||+
T Consensus         3 rr~~Alydy~~-~~~~eLsf~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yV~   55 (58)
T d1uj0a_           3 RRVRALYDFEA-VEDNELTFKHGELITVLDDSDANW-WQGEN-HRGTGLFPSNFVT   55 (58)
T ss_dssp             EEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEE-TTEEEEEEGGGEE
T ss_pred             CEEEECCCCCC-CCcCCcCCCCCCEEEEeEEeCCCE-EEEEE-CCeEEEEehHhEe
Confidence            57999999999 899999999999999999999999 99998 8999999999997

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.4e-16  Score=106.41  Aligned_cols=67  Identities=25%  Similarity=0.493  Sum_probs=59.9

Q ss_pred             CeEEeecCCCCCCEEEEEEE-----CCEEeEEEEEeeCCe-E-EcCCcccCCHHHHHHHhhhCCcccceeeCCc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHI-----NNQIQRFRIEKKAVR-Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFP   67 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~-----~~~v~h~~I~~~~~~-~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p   67 (235)
                      +||||+|.+.+|.|+||++.     ++.|+|++|...+++ | +.+...|+||.+||+||+++++++.++|..|
T Consensus        31 ~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~gL~~~L~~P  104 (104)
T d1g83a2          31 TFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVP  104 (104)
T ss_dssp             CEEEEECSSSTTCEEEEEEEECSSSCEEEEEEEEEECTTSCEEETTTEEESSHHHHHHHHHHCCTTSSSCCCCC
T ss_pred             cEEEeccCCCCCCeEEEEEEeecCcCCeEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHhhCCCCCceeCCCC
Confidence            69999999999999999996     457999999887655 4 6777899999999999999999999999887

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=2.5e-16  Score=108.23  Aligned_cols=68  Identities=22%  Similarity=0.378  Sum_probs=58.7

Q ss_pred             CeEEeecCCCCCCEEEEEEEC------CEEeEEEEEeeCCe---E-EcCCcccCCHHHHHHHhhhCCcccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN------NQIQRFRIEKKAVR---Y-LMGGRTFECLDAVINRYRKEQIVEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~------~~v~h~~I~~~~~~---~-~~~~~~F~sl~eLi~~y~~~~~~~~~~L~~p~~   69 (235)
                      +||||+|++ +|.|+|||+..      +.|+||+|....++   | +.+...|+||.|||+||+++++++.++|++||+
T Consensus        30 ~FLVR~S~~-~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~L~~~L~~Pv~  107 (108)
T d1luia_          30 AFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVTRLRYPVC  107 (108)
T ss_dssp             EEEEEECCT-TTCEEEEEECSCCTTTCSCEEEEECEECCCSSCCEESSSSCCBSSHHHHHHHHHTTCCSSSSSSSEECC
T ss_pred             eEEEEecCC-CCCEEEEEEecCCcccCCceeEEEEEEecCCCceeecCCCcccCCHHHHHHHHhhCCCCCccCCCCcCC
Confidence            599999975 89999999973      46999999876543   4 556789999999999999999999999999986

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.6e-16  Score=96.63  Aligned_cols=57  Identities=26%  Similarity=0.578  Sum_probs=52.5

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ....++|+|+|.+ ..+++|+|.+||+|.|++..+++| |.++. +|+.|+||++||++.
T Consensus         4 ~g~~v~Aly~y~a-~~~~eLsf~~Gd~i~vl~~~~~~W-w~g~~-~g~~G~~P~~yVe~~   60 (62)
T d1k4us_           4 KGSQVEALFSYEA-TQPEDLEFQEGDIILVLSKVNEEW-LEGES-KGKVGIFPKVFVEDS   60 (62)
T ss_dssp             CCEEEECCSCBCC-CSSSBCCBCSSCEEEEEEESSSSC-EEEEC-SSCEEEECGGGCCCS
T ss_pred             CCCEEEECCCCCC-CCcCCcCCCCCCEEEEeEEcCCCE-EEEEE-CCcEEEEchHHeEEC
Confidence            4567999999999 899999999999999999999999 99987 899999999999865

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=7.7e-16  Score=106.14  Aligned_cols=69  Identities=35%  Similarity=0.558  Sum_probs=59.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe------------------EEcCCcccCCHHHHHHHhhhCCcccce
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR------------------YLMGGRTFECLDAVINRYRKEQIVEGH   62 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~------------------~~~~~~~F~sl~eLi~~y~~~~~~~~~   62 (235)
                      +||||+|.+.+|.|+||++.+++|+||+|.+.+++                  |..+...|+||.+||+||+.+++. .+
T Consensus        23 ~FLVR~S~~~~~~~~LS~~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~l~-~~  101 (109)
T d2eyva1          23 VFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLD-TT  101 (109)
T ss_dssp             CEEEECCCSSSSCEEEEEEETTEEEEEEEECCCCSSCCCSSSSCCCCSCCCCCEEETTEEESSHHHHHHHSSSSCSS-SS
T ss_pred             eEEeeecCCCCCCEEEEEEECCEEEEEEEEEcCCcceeeccccccccccccceEEeCCeeeCCHHHHHHHHhhCcCC-CC
Confidence            69999999999999999999999999999876532                  344567899999999999998865 46


Q ss_pred             eeCCcccc
Q psy13524         63 TLGFPVTR   70 (235)
Q Consensus        63 ~L~~p~~~   70 (235)
                      .|++||+|
T Consensus       102 ~L~~P~~r  109 (109)
T d2eyva1         102 TLIEPVSR  109 (109)
T ss_dssp             CCCSBCCS
T ss_pred             ccCCcCCC
Confidence            79999975

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=5.6e-16  Score=104.31  Aligned_cols=59  Identities=27%  Similarity=0.620  Sum_probs=54.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhhCCcc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRKEQIV   59 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~~~~~   59 (235)
                      +||||.|++.+|.|+|||+.++.|+||+|.+..++ |..++..|+||.+||+||+++++.
T Consensus        29 ~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~~~~l~   88 (97)
T d1r1qa_          29 FFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSIS   88 (97)
T ss_dssp             CEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCCBSSHHHHHHHTTTSCSC
T ss_pred             CEEEeecCCCCCCEEEEEEecCCeEEEEEEEcCCCeEEeCCCCcCCHHHHHHHHccCCcC
Confidence            69999999999999999999999999999998777 777888999999999999998864

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.61  E-value=5.2e-16  Score=92.21  Aligned_cols=53  Identities=17%  Similarity=0.504  Sum_probs=49.1

Q ss_pred             EEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        136 IVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       136 ~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ++|+|+|.+ .++++|+|++||+|.|+++.+++| |.++..+|+.|+||++||+.
T Consensus         1 V~Alydy~a-~~~~eLs~~~Gd~~~vl~~~~~~W-w~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1           1 VIALYDYQT-NDPQELALRCDEEYYLLDSSEIHW-WRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             EEESSCCCC-SSTTBCCCCTTCEEEECCCSCSSC-EEEECTTSCEEEECGGGEEE
T ss_pred             CEEeeeECC-CCCCeeeECCCCEEEEeEEcCCCe-EEEEeCCCCEEEEeHHHEeC
Confidence            579999999 899999999999999999999999 98987789999999999973

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=1.1e-15  Score=92.21  Aligned_cols=55  Identities=16%  Similarity=0.238  Sum_probs=49.1

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      .++|+|+|.+ +.++||+|++||+|.|+.+.+++|||.++. +++.|+||++||+++
T Consensus         2 ~~vAlydy~a-~~~~eLs~~~Gd~i~vl~~~~~~~W~~~~~-~g~~G~~P~~yv~~v   56 (57)
T d1opka1           2 LFVALYDFVA-SGDNTLSITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSNYITPV   56 (57)
T ss_dssp             EEEESSCBCC-CSTTBCCBCTTCEEEEEEECTTSSEEEEEC-SSCEEEEEGGGEEES
T ss_pred             EEEECccCCC-CCcCCcCCCCCCEEEEeEecCCCCEEEEEE-CCCEeEEchhheEEC
Confidence            5799999999 899999999999999998877665488887 888999999999986

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.3e-15  Score=90.34  Aligned_cols=52  Identities=31%  Similarity=0.525  Sum_probs=48.6

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEE
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      .++|+++|.+ +.+++|+|.+||+|.|+++.++|| |.++. +++.|+||++||+
T Consensus         2 ~yval~~y~a-~~~~eLs~~~Gd~v~vl~~~~~gW-w~g~~-~g~~G~~P~~yve   53 (53)
T d1wlpb1           2 PYVAIKAYTA-VEGDEVSLLEGEAVEVIHKLLDGW-WVIRK-DDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEEECSCBCC-CSSSBCCBCTTCEEEEEECCTTSS-EEEES-SSCEEEECSTTEE
T ss_pred             eEEEeeeECC-CCCCEecCCCCCEEEEEeecCCce-EEEEE-CCcEeEecHHhCC
Confidence            4689999999 899999999999999999999999 98886 8999999999986

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=1.9e-15  Score=91.62  Aligned_cols=55  Identities=24%  Similarity=0.453  Sum_probs=49.8

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEe-cCCCceeEEeCCcEEec
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTA-HRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~-~~~~~~G~~P~~~v~~~  191 (235)
                      .++|+|+|.+ ..+++|+|++||+|.|+++.+++| |.++ ..+|+.|+||++||+.+
T Consensus         2 ~~~Alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~~g~~G~~P~~yVe~i   57 (58)
T d1jo8a_           2 WATAEYDYDA-AEDNELTFVENDKIINIEFVDDDW-WLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCC-CSTTBCCBCTTCEEEEEECCSSSE-EEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEEccCCCC-CCcCCcCCCCCCEEEEEEEcCCCE-EEEEECCCCCEEEEchHHEEEc
Confidence            5899999999 899999999999999999999999 7766 44789999999999875

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=2e-15  Score=94.26  Aligned_cols=58  Identities=17%  Similarity=0.481  Sum_probs=53.0

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ .++++|+|++||+|.|+.+.+.+| |.++..+|+.|+||++||+++..
T Consensus         3 ~~v~Alydf~a-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~g~~G~~P~~yV~~~~~   60 (67)
T d1gl5a_           3 EIVVAMYDFQA-TEAHDLRLERGQEYIILEKNDLHW-WRARDKYGSEGYIPSNYVTGKKS   60 (67)
T ss_dssp             SCEEECSCBCC-SSSSBCCBCTTCEEEEEECSSSSE-EEEECSSSCEEEEETTSEESSTT
T ss_pred             EEEEECCCCCC-CCcCCcCCCCCCEEEEEEecCCCc-EEEEECCCCEEEEEhHHeEEecC
Confidence            46899999999 899999999999999999989999 88887688999999999998754

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3e-15  Score=90.51  Aligned_cols=56  Identities=30%  Similarity=0.499  Sum_probs=49.2

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      .++|+|+|.+ ++++||+|++||+|.|+++.+++|+|.....+++.|+||++||+++
T Consensus         2 l~vAl~dy~a-~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_           2 LFVALYDYEA-ITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             EEEESSCBCC-SSTTBCCBCTTCEEEEEECSSCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCC-CCcCCcCCCCCCEEEEEEecCCCCEEEEECCCCCEEEEeHHHeEEC
Confidence            4689999999 8999999999999999999888994455556899999999999874

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=8.1e-16  Score=93.93  Aligned_cols=57  Identities=32%  Similarity=0.596  Sum_probs=50.6

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec-CCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH-RTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~-~~~~~G~~P~~~v~~~  191 (235)
                      +..++|+|+|.+ .+++||+|++||+|.|+++.+++| |.+.. .+++.|+||+|||+.+
T Consensus         3 G~~~rAl~df~~-~~~~eLs~~~Gd~i~v~~~~~~~W-~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_           3 GKIFRAMYDYMA-ADADEVSFKDGDAIINVQAIDEGW-MYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CCCEECCSCCCC-SSSSBCCCCTTCEECCSEECSSSE-EEEECTTTCCEEEEETTTCEEC
T ss_pred             CcEEEECccCCC-CCCCCcCCCCCCEEEEEEEcCCCE-EEEEECCCCCEEEEcHHHEEEC
Confidence            467899999999 899999999999999999999999 66654 4789999999999864

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.3e-15  Score=104.03  Aligned_cols=70  Identities=19%  Similarity=0.245  Sum_probs=59.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcCC----cccCCHHHHHHHhhhCCccc--ceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMGG----RTFECLDAVINRYRKEQIVE--GHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~----~~F~sl~eLi~~y~~~~~~~--~~~L~~p~~~   70 (235)
                      +||||+|.+.+|.|+||++.+++|+||+|...+++| +...    ..|+||.+||+||++++++.  ...|..||+|
T Consensus        34 tFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~l~~~~~~~~~F~sl~~LV~~Y~~~~~~~~~~~llt~P~~r  110 (112)
T d2izva2          34 TFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIR  110 (112)
T ss_dssp             EEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTCCGGGCCTTSCCCCEECCC
T ss_pred             cEEEeecCCCCCCeEEEEEecCCceEEEEEEeCCeEEEeecccCcccCCCHHHHHHHHhcccccccCccccCCCCCC
Confidence            599999999999999999999999999999988876 4322    26999999999999987754  4568889876

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=4.1e-16  Score=94.56  Aligned_cols=55  Identities=27%  Similarity=0.533  Sum_probs=51.1

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|+|.+ .++++|+|++||+|.|+++.+++| |.++. +++.|+||++|++++
T Consensus         3 ~~~~al~dy~~-~~~~eLs~~~Gd~i~vl~~~~~~W-w~~~~-~g~~G~~P~~yve~l   57 (58)
T d1ng2a1           3 QTYRAIADYEK-TSGSEMALSTGDVVEVVEKSESGW-WFCQM-KAKRGWIPASFLEPL   57 (58)
T ss_dssp             EEEECSSCBCC-SSTTCCCBCTTCEEEEEECCTTSC-CEEEE-CCCCCCCCGGGCCCS
T ss_pred             eEEEECccCcC-CCCCCcCCCCCCEEEEEEecCCCe-EEEEE-CCCCcEEcHhHEEEC
Confidence            56899999999 899999999999999999999999 88887 899999999999875

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.58  E-value=2.7e-15  Score=102.89  Aligned_cols=68  Identities=24%  Similarity=0.386  Sum_probs=55.9

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EE-cCCcccCCHHHHHHHhhhCCc-----ccceeeCCccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YL-MGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVT   69 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~-~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~   69 (235)
                      +||||.|+ .+|.|+||++.+++|+||+|.+.+++ |+ .....|+||.|||+||+++++     ++.+.|..|+.
T Consensus        32 ~FLVR~S~-~~~~y~Lsv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~Y~~~~l~~~~~~l~~~L~~Pv~  106 (107)
T d1qada_          32 TFLVRESS-KQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVY  106 (107)
T ss_dssp             EEEEEEC----CCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSCGGGTCTTCCCCCCEETT
T ss_pred             cEEEEecC-CCCCEEEEEEecCCeEEEEEEECCCCeEEcCCCCccCCHHHHHHHHHhCccccccCCCceEcccccc
Confidence            59999995 58999999999999999999998887 44 446689999999999999875     35678888873

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.6e-15  Score=94.20  Aligned_cols=58  Identities=21%  Similarity=0.472  Sum_probs=51.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCC-CeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGD-GWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~-~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      +..++|+|+|.+ .+++||+|++||+|.|+.+.++ +| |.++..+|+.|+||++||+.+.
T Consensus         6 g~~~~Alydy~a-~~~~ELs~~~Gd~i~vl~~~~~~~W-~~~~~~~g~~G~~P~~yve~~~   64 (71)
T d1k9aa1           6 GTECIAKYNFHG-TAEQDLPFCKGDVLTIVAVTKDPNW-YKAKNKVGREGIIPANYVQKRE   64 (71)
T ss_dssp             TCEEEESSCBCC-SSSSBCCBCTTCEEEEEEECSSTTE-EEEECTTCCEEEEEGGGEEECC
T ss_pred             CCEEEEccCCCC-CCCCCccCCCCCEEEEeEeccCCCE-EEEEeCCCCEEEEchHHeEEcc
Confidence            467999999999 8999999999999999987644 56 9999877999999999999875

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6.9e-16  Score=96.37  Aligned_cols=60  Identities=27%  Similarity=0.656  Sum_probs=54.0

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ .++++|+|++||+|.|+++.+.+| |.++..+|+.|+||++||+++++
T Consensus         7 ~~~~v~Alydy~a-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~g~~G~vP~~yv~~~~~   66 (67)
T d1awwa_           7 ELKKVVALYDYMP-MNANDLQLRKGDEYFILEESNLPW-WRARDKNGQEGYIPSNYVTEAED   66 (67)
T ss_dssp             CCCEEEBSSCCCC-SSSSSCCCCSSCEEECCCCCSSSE-ECCBCTTSCBCCEETTTBCCSCC
T ss_pred             CCEEEEECcCCCC-CCcCCcCCCCCCEEEEEEEcCCCe-EEEEECCCCEEEEcHHHeEECcC
Confidence            3467899999999 899999999999999999988999 98887689999999999987754

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=3.9e-15  Score=90.39  Aligned_cols=56  Identities=16%  Similarity=0.471  Sum_probs=50.4

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ..++|+|+|.+ .+++||+|++||+|.|++.. ++| |.++..+|+.|+||+|||+.+.
T Consensus         2 ~~a~alydf~a-~~~~ELs~~~Gd~i~v~~~~-~~w-w~~~~~~g~~G~~P~nyve~i~   57 (59)
T d1i07a_           2 KYAKSKYDFVA-RNSSELSVMKDDVLEILDDR-RQW-WKVRNASGDSGFVPNNILDIMR   57 (59)
T ss_dssp             CEEEESSCBCC-SSTTBCCBCTTCEEEECGGG-CCE-EEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEEccCCCC-CCCCeeeEcCCCEEEEEEEc-CCc-EEEEEcCCCEEEECHHHeEECC
Confidence            47899999999 89999999999999999874 579 8887778999999999999875

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.8e-15  Score=101.05  Aligned_cols=60  Identities=25%  Similarity=0.516  Sum_probs=54.6

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccCC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDET  194 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~~  194 (235)
                      ....++|+|+|.+ ++++||+|++||+|.|+++.+++| |.++. +|+.|+||++||+.+.+.
T Consensus        33 ~~~~~~Alydy~a-~~~~ELsf~~Gd~i~Vl~~~~~gW-w~g~~-~g~~G~~P~nyVe~~~~~   92 (98)
T d1udla_          33 PVCQVIAMYDYAA-NNEDELSFSKGQLINVMNKDDPDW-WQGEI-NGVTGLFPSNYVKMTTDS   92 (98)
T ss_dssp             CSEEEEESSCCCC-SSTTSCCCCTTCEEEECBCCSSSE-EBCBS-SSCBCCEETTSEEECCCC
T ss_pred             CccEEEEccCCCC-CCCCEeeEcCCCEEEEeEecCCCe-EEEEE-CCeEEEEchHHEEECCCC
Confidence            3467999999999 899999999999999999999999 99987 899999999999988653

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.3e-15  Score=90.36  Aligned_cols=53  Identities=30%  Similarity=0.502  Sum_probs=42.2

Q ss_pred             EEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEE
Q psy13524        135 RIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVE  189 (235)
Q Consensus       135 ~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~  189 (235)
                      .++|+|+|.+ ++++||+|.+||+|.|+++..++|||.++. +|+.|+||+|||+
T Consensus         2 ~a~Alydy~a-~~~~ELs~~~Gd~v~v~~~~~~~~W~~~~~-~g~~G~vP~nyve   54 (56)
T d1gria1           2 EAIAKYDFKA-TADDELSFKRGDILKVLNEECDQNWYKAEL-NGKDGFIPKNYIE   54 (56)
T ss_dssp             EEEECSCBCC-CSSSCCCBCTTCEEEC------CCEEEEES-SSCEEEEEGGGEE
T ss_pred             EEEEeeCCCC-CCCCCcCCCCCCEEEEEeccCCCCeEEEEE-CCcEEEEehhhEE
Confidence            5899999999 899999999999999888764444388886 8999999999996

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=8.9e-15  Score=92.28  Aligned_cols=59  Identities=22%  Similarity=0.532  Sum_probs=52.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC--CCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG--DGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~--~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ +.++||+|.+||+|.|+.+.+  .+| |.++..+|+.|+||++||+++.+
T Consensus         6 l~~~~Alydf~~-~~~~eLs~~~Gd~i~vl~~~~~~~~W-w~~~~~~G~~G~vP~~yv~~~~~   66 (71)
T d1u5sa1           6 LHVVQTLYPFSS-VTEEELNFEKGETMEVIEKPENDPEW-WKCKNARGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             SSEEEESSCCCC-CSSSBCCCCSSCCEEEEECCCTTTCE-EEEEETTTEEEEEETTSEEECCC
T ss_pred             cEEEEECccCCC-CCCCEeeECCCCEEEEEEcccCCCCe-EEEEECCCCEEEEChHHEEECCC
Confidence            467999999999 899999999999999998753  479 88887689999999999999864

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=5e-15  Score=92.28  Aligned_cols=57  Identities=19%  Similarity=0.447  Sum_probs=49.2

Q ss_pred             ccEEEEeeccCCCCCC-CCcccCCCCEEEEeeccC-----CCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDT-DELTFQKGDIFFVHNELG-----DGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~-~eL~~~~gd~i~v~~~~~-----~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ .++ .||+|++||+|.|+++.+     .+| |.++..+|+.|+||+|||+.+
T Consensus         5 ~~~~~Alydy~~-~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~W-w~g~~~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1           5 LEFARALYDFVP-ENPEMEVALKKGDLMAILSKKDPLGRDSDW-WKVRTKNGNIGYIPYNYIEII   67 (67)
T ss_dssp             CEEEEESSCBCC-SSTTTBCCBCTTCEEEEEEEECTTSCEEEE-EEEECTTSCEEEEEGGGEEEC
T ss_pred             CEEEEECccCCC-CCCCCEeCCCCCCEEEEEEeecCCCcCCCe-EEEEeCCCCEEEEEHHHEEEC
Confidence            357999999999 555 599999999999998764     489 999877899999999999864

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=9.5e-15  Score=88.30  Aligned_cols=55  Identities=24%  Similarity=0.610  Sum_probs=48.5

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccC--CCeeEEEecCCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELG--DGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~--~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      .+++|+|+|.+ ++++||+|++||+|.|+.+.+  .+| |.++. +|+.|+||++||+.+
T Consensus         2 P~~~Alydy~a-~~~~ELs~~~Gd~v~vl~~~~~~~~W-~~~~~-~g~~G~vP~~yve~i   58 (58)
T d1oota_           2 PKAVALYSFAG-EESGDLPFRKGDVITILKKSDSQNDW-WTGRV-NGREGIFPANYVELV   58 (58)
T ss_dssp             CEEEESSCBCC-CSTTBCCBCTTCEEEEEECCSCTTSE-EEEEE-TTEEEEEEGGGEEEC
T ss_pred             CeEEEccCCCC-CCCCCccCCCCCEEEEEEeecCCCCE-EEEEE-CCcEEEEcHHHEEEC
Confidence            46899999999 899999999999999998864  356 88887 899999999999864

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.2e-14  Score=92.31  Aligned_cols=58  Identities=22%  Similarity=0.474  Sum_probs=51.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|+++ +++| |.++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~~alydy~a-~~~~ELs~~~Gd~i~vl~~-~~~w-w~g~~-~g~~G~fP~~yve~i~~   66 (74)
T d1j3ta_           9 ENLKAQALCSWTA-KKDNHLNFSKHDIITVLEQ-QENW-WFGEV-HGGRGWFPKSYVKIIPG   66 (74)
T ss_dssp             CCCEEEESSCBCC-CSTTBCCBCTTCEEEEEEE-CSSE-EEEES-TTCCCEEEGGGEEECCC
T ss_pred             CCeEEEEccCCCC-CCCCEecCCCCCEEEEEEc-cCCe-EEEEE-CCcEEEEchhhEEECCC
Confidence            3468999999999 8999999999999999998 6689 87887 89999999999998854

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=6.6e-15  Score=90.48  Aligned_cols=56  Identities=25%  Similarity=0.468  Sum_probs=49.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC---CCeeEEEecCCCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG---DGWLWVTAHRTGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~---~~w~w~~~~~~~~~G~~P~~~v~~~  191 (235)
                      ...++|+|+|.+ ++++||+|++||+|.|+.+.+   .|| |.++. +|+.|+||++||+.+
T Consensus         4 ~g~v~Alydy~a-~~~~ELs~~~Gd~i~vl~~~~~~~~gW-~~g~~-~g~~G~~P~~yv~~~   62 (63)
T d1ycsb2           4 KGVIYALWDYEP-QNDDELPMKEGDCMTIIHREDEDEIEW-WWARL-NDKEGYVPRNLLGLY   62 (63)
T ss_dssp             GGEEEESSCBCC-SSTTBCCBCSSCEEEECCCCTTSCSSE-EEEEE-TTEEEEEEGGGEECC
T ss_pred             CCEEEEeeCCCC-CCCCCcCCCCCCEEEEEEecCCCCCCE-EEEEE-CCeEEEEchHHhEeC
Confidence            357899999999 899999999999999997753   469 99988 899999999999854

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=6.2e-15  Score=93.23  Aligned_cols=59  Identities=20%  Similarity=0.251  Sum_probs=51.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..+++|+|+|.+ ..++||+|++||+|.|+...+.+|||.++. +++.|+||++||+.+..
T Consensus        10 ~~~~~alydy~~-~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~-~g~~G~~P~~yve~i~~   68 (72)
T d1ugva_          10 FRKAKALYACKA-EHDSELSFTAGTVFDNVHPSQEPGWLEGTL-NGKTGLIPENYVEFLSG   68 (72)
T ss_dssp             CCCEEESSCBCC-CSSSBCCBCTTCEEBSCCBCSSTTEEEEES-SSCEEEEEGGGEEECCS
T ss_pred             CEEEEEcccCCC-CCCCEecCCCCCEEEEeeccCCCCEEEEEe-CCCEEEEchHHEEECCC
Confidence            457999999999 889999999999999998876543388887 89999999999998853

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.3e-14  Score=101.14  Aligned_cols=59  Identities=27%  Similarity=0.463  Sum_probs=54.2

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      .+..++|+|+|.+ ..++||+|.+||+|.|+++.+.|| |.++. +|+.||||++||+.+..
T Consensus        13 ~g~~~~alydy~a-~~~dELs~~~Gd~i~Vl~~~~~gW-w~g~~-~g~~G~~P~~yv~~~~~   71 (118)
T d1ng2a2          13 AGEPYVAIKAYTA-VEGDEVSLLEGEAVEVIHKLLDGW-WVIRK-DDVTGYFPSMYLQKSGQ   71 (118)
T ss_dssp             TCEEEEESSCBCC-CSTTBCCBCTTCEEEEEECCTTSE-EEEEE-TTEEEEEEGGGEEETTS
T ss_pred             CCcEEEECcCCCC-CCCCEecCCCCCEEEEeEecCCCe-EEEEE-CCeEEEEehhhEEECCC
Confidence            4578999999999 899999999999999999999999 99998 89999999999998743

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.4e-14  Score=99.55  Aligned_cols=69  Identities=29%  Similarity=0.577  Sum_probs=59.1

Q ss_pred             CeEEeecCCCCCCEEEEEEEC----------CEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc----ccceeeC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN----------NQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI----VEGHTLG   65 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~----------~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~----~~~~~L~   65 (235)
                      +||||+|++.+|.|+|||+..          +.++|++|...+++| +.+...|+||.|||+||+++++    +..+.|+
T Consensus        24 ~FLVR~S~~~~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~F~sl~~LV~~y~~~~l~~~~g~~~~L~  103 (108)
T d2shpa3          24 SFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLK  103 (108)
T ss_dssp             EEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCCBCTTSCBCCCC
T ss_pred             eEEEEecCCCCCCeEEEEEecCccccccccccceeeEEEEeCCCceEeCCCcccCCHHHHHHHHhhCCCCCCCCceEEcC
Confidence            599999999999999999985          458999998888875 6778899999999999999865    4557888


Q ss_pred             Cccc
Q psy13524         66 FPVT   69 (235)
Q Consensus        66 ~p~~   69 (235)
                      +||.
T Consensus       104 ~Pv~  107 (108)
T d2shpa3         104 QPLN  107 (108)
T ss_dssp             EECC
T ss_pred             CCCc
Confidence            8874

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2e-14  Score=93.05  Aligned_cols=60  Identities=15%  Similarity=0.376  Sum_probs=52.9

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEec----CCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAH----RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~----~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|+++.+++| |.++.    ..++.|+||++||+.+.+
T Consensus         6 ~g~~~~al~~y~~-~~~~eLs~~~Gd~i~Vl~~~~~~W-w~g~~~~~~~~~~~G~~P~~yv~~~~~   69 (80)
T d1ue9a_           6 SGEIAQVTSAYVA-SGSEQLSLAPGQLILILKKNTSGW-WQGELQARGKKRQKGWFPASHVKLLGP   69 (80)
T ss_dssp             CCEEEEECSCCCC-CSTTBCCCCTTCEEEEEEECSSSE-EEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred             CCCEEEECcCCCC-CCCCEeeEcCCCEEEEEEEeCCCe-EEEEEccCCCCCCEeEEEheeEEECCC
Confidence            3468999999999 899999999999999999999999 88764    356799999999998864

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=9.2e-15  Score=99.98  Aligned_cols=69  Identities=22%  Similarity=0.339  Sum_probs=59.6

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-E-Ec-CCcccCCHHHHHHHhhhCCc-ccceeeCCcccc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-Y-LM-GGRTFECLDAVINRYRKEQI-VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~-~~-~~~~F~sl~eLi~~y~~~~~-~~~~~L~~p~~~   70 (235)
                      +||||.|.+.++ |+||++.++.++|++|...+++ | +. ....|+||.|||+||+++++ ++.+.|++||++
T Consensus        32 ~FLvR~S~~~~~-y~Lsv~~~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV~~y~~~~~~~~~~~L~~P~~~  104 (106)
T d2cs0a1          32 SFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELLTQPCRQ  104 (106)
T ss_dssp             CEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSCCSSCCCCCCSBCCC
T ss_pred             cEEEEecCCCCC-EEEEEEecCCceeEEEEEcCCCCEEEecCCccCCCHHHHHHHHHHCCCCCccCcccCcCCC
Confidence            699999987665 9999999999999999887766 5 43 34579999999999999887 678899999987

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.2e-15  Score=95.11  Aligned_cols=57  Identities=26%  Similarity=0.550  Sum_probs=52.7

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ..++|+|+|.+ ..++||+|++||+|.|+++.+++| |.++. +++.|+||++||+++..
T Consensus        11 ~~~rAlydy~a-~~~~eLs~~~Gd~i~v~~~~~~~W-~~g~~-~g~~G~~P~~yv~~i~~   67 (76)
T d1ujya_          11 LIVKARFNFKQ-TNEDELSVCKGDIIYVTRVEEGGW-WEGTL-NGRTGWFPSNYVREIKS   67 (76)
T ss_dssp             EEEECCSCBCC-SSTTSCCBCSSCCEEESSCCSSSC-EEEEE-TTEEEEECTTTSEECCH
T ss_pred             EEEEECccCCC-CCCCCccCCCCCEEEEeEEcCCCE-EEEEE-CCcEEEEchHHEEECCC
Confidence            47899999999 899999999999999999989999 99988 89999999999998753

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.4e-14  Score=89.57  Aligned_cols=57  Identities=28%  Similarity=0.575  Sum_probs=50.3

Q ss_pred             cEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEe-cCCCceeEEeCCcEEecc
Q psy13524        134 KRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTA-HRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~-~~~~~~G~~P~~~v~~~~  192 (235)
                      ..++|+|+|.+ ..++||+|++||+|.|++..+++| |.++ ..+|+.|+||++||++.+
T Consensus         3 ~~~vAlydf~~-~~~~eLs~~~Gd~i~v~~~~~~~W-w~~~~~~~g~~G~vP~~yv~~~~   60 (64)
T d1fmka1           3 TTFVALYDYES-RTETDLSFKKGERLQIVNNTEGDW-WLAHSLSTGQTGYIPSNYVAPSD   60 (64)
T ss_dssp             EEEEESSCBCC-CSSSBCCBCTTCEEEESCCCSSSE-EEEEETTTCCEEEEEGGGEEETT
T ss_pred             eEEEECccCCC-cCcCCcCCCCCCEEEEEEEcCCCc-EEEEECCCCCEEEEehHHeEECc
Confidence            46799999999 899999999999999999988899 6655 447899999999999874

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=1.2e-14  Score=91.88  Aligned_cols=61  Identities=23%  Similarity=0.386  Sum_probs=49.7

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC-CCeeEEEec-CCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG-DGWLWVTAH-RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~w~~~~-~~~~~G~~P~~~v~~~~~  193 (235)
                      ...+++|+|+|.+..++++|+|++||+|.|+...+ ++| |.+.. .+++.|+||++||+.+.+
T Consensus         6 ~~~~~~Alydy~~~~~~deLsf~~Gd~i~vl~~~~~~gW-~~g~~~~~g~~G~fP~nyVe~i~~   68 (72)
T d1spka_           6 SGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGW-LYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             CSCEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTE-EEEEETTTCCEEEEEGGGCEECSS
T ss_pred             CCCEEEEeeccCCCCCCCEeeEcCCCEEEEEEeecCCCe-EEEEECCCCCEEEEchhhEEECCC
Confidence            44689999999983457899999999999987654 567 87764 368999999999998853

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=9.1e-15  Score=97.43  Aligned_cols=61  Identities=18%  Similarity=0.359  Sum_probs=51.4

Q ss_pred             CccEEEEeeccCCCCC------CCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPD------TDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~------~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|||.+ .+      ++||+|++||+|.|+.+.+.+|||.+...+|+.|+||+|||+++.+
T Consensus        16 ~~~~~~Alydy~~-~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~nyve~~~~   82 (96)
T d1wiea_          16 KVHLCVARYSYNP-FDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQD   82 (96)
T ss_dssp             CEEEEEESSCCCG-GGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCS
T ss_pred             CceEEEEeeeecC-cccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEehHHeEECCC
Confidence            4578999999987 33      4789999999999998877665488887789999999999998864

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.50  E-value=1.8e-15  Score=99.60  Aligned_cols=55  Identities=16%  Similarity=0.387  Sum_probs=46.7

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCe-EEcCCcccCCHHHHHHHhhh
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVR-YLMGGRTFECLDAVINRYRK   55 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~-~~~~~~~F~sl~eLi~~y~~   55 (235)
                      +||||+|++.+|.|+|||+.+++|+||+|.+.+++ |+.+...|+||.+||+||+.
T Consensus        31 ~FLvR~S~~~~g~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~LV~~y~t   86 (86)
T d1rpya_          31 LFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHFHT   86 (86)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEC----CCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             eEEEEecCCCCCcEEEEEEECCceEEEEEEEcCCceEEeCCCeeCCHHHHHHhhcC
Confidence            69999999999999999999999999999887777 46677899999999999974

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.8e-14  Score=87.64  Aligned_cols=56  Identities=23%  Similarity=0.496  Sum_probs=48.4

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEe
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVED  190 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~  190 (235)
                      ...++|+|+|.+ +.++||+|++||+|.|++..+ +|||.....+|+.|+||++||++
T Consensus         6 ~~~~~al~dy~a-~~~~eLs~~~Gd~i~v~~~~~-~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           6 DNLVIALHSYEP-SHDGDLGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             TCEEEESSCBCC-CSTTBCCBCTTCEEEEEECCS-SEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CcEEEECCCCCc-CCcCCcCCCCCCEEEEeEEcC-CCEEEEeccCCeEeEEcHHHEEe
Confidence            357999999999 899999999999999999865 56366666689999999999986

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.2e-14  Score=90.89  Aligned_cols=58  Identities=22%  Similarity=0.567  Sum_probs=51.8

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ....++|+|+|.+ ..++||+|++||+|.|++. +++| |.++. +++.|+||++||++++.
T Consensus         7 ~~~~~vAl~~y~~-~~~~eLs~~~Gd~v~vl~~-~~~W-w~~~~-~g~~G~vP~~yv~~~~~   64 (69)
T d1uhfa_           7 GGEEYIALYPYSS-VEPGDLTFTEGEEILVTQK-DGEW-WTGSI-GDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             CSEEEECSSCBCC-SSSSBCCBCTTCEEEECEE-ETTE-EEECS-TTCCEEECGGGCEECCC
T ss_pred             CCcEEEECccCCC-CCcCCcCCCCCCEEEEEEe-cCCE-EEEEE-CCcEEEEchhhEEECCC
Confidence            3568899999999 8899999999999999987 5689 99987 89999999999998753

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=1.5e-14  Score=87.03  Aligned_cols=53  Identities=21%  Similarity=0.271  Sum_probs=44.9

Q ss_pred             EEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEE-ecCCCceeEEeCCcEE
Q psy13524        136 IVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVT-AHRTGEQGMIFRDLVE  189 (235)
Q Consensus       136 ~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~-~~~~~~~G~~P~~~v~  189 (235)
                      ++|+|+|.+ +.++||+|++||+|.|++..+.+|||.+ ...+|+.|+||++||+
T Consensus         2 aralydf~a-~~~~ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyve   55 (56)
T d1zuua1           2 NKVLYAYVQ-KDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   55 (56)
T ss_dssp             CEECSCBCC-CSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             CEEeeeeCC-CCCCEeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEE
Confidence            689999999 8999999999999999988765543544 4448999999999997

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.6e-14  Score=87.98  Aligned_cols=58  Identities=29%  Similarity=0.493  Sum_probs=49.7

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ +.++||+|++||+|.|++. +++|||.....+|+.|+||++||++++
T Consensus         4 ~~~vvAlydy~~-~~~~eLs~~~Gd~i~v~~~-~~~ww~~~~~~~g~~G~vP~~yv~~~~   61 (65)
T d1qcfa1           4 RIIVVALYDYEA-IHHEDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVD   61 (65)
T ss_dssp             CCEEEESSCBCC-CSTTBCCBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             cEEEEECCcCCC-CCcCccCCCCCCEEEEEEE-CCCCEEEEEccCCCEEEEchHHeEECc
Confidence            357899999999 8999999999999999986 567845556668999999999999874

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3e-15  Score=94.42  Aligned_cols=59  Identities=27%  Similarity=0.398  Sum_probs=52.6

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ .++++|+|.+||+|.|+++.+++| |.++..+++.|+||++||+++.+
T Consensus         6 ~~~v~Aly~f~a-~~~~eLsf~~Gd~i~v~~~~~~~W-w~g~~~~~~~G~fP~~yv~~~~~   64 (71)
T d2hspa_           6 KCAVKALFDYKA-QREDELTFIKSAIIQNVEKQEGGW-WRGDYGGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SSCEECCSCCCC-SSSSSCCCCTTCEEBSCCCBTTTE-ECCBCSSCCSCCEETTTCCSCSC
T ss_pred             cEEEEEcccCCc-CCcCCccCCCCCEEEEEEecCCCE-EEEEECCeEEEEEchHHeEEcCC
Confidence            357899999999 889999999999999999999999 99987667777999999998754

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=4.1e-14  Score=90.02  Aligned_cols=59  Identities=10%  Similarity=0.195  Sum_probs=52.3

Q ss_pred             CccEEEEeeccCCCCCCCCcccCCCCEEEEeeccCCCeeEEEecC-----CCceeEEeCCcEEecc
Q psy13524        132 DKKRIVAILPYTKMPDTDELTFQKGDIFFVHNELGDGWLWVTAHR-----TGEQGMIFRDLVEDLD  192 (235)
Q Consensus       132 ~~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~-----~~~~G~~P~~~v~~~~  192 (235)
                      ....++|+|+|.+ ..++||+|.+||+|.|++..+++| |.++..     +++.||||++||+++.
T Consensus         6 ~g~~~~al~dy~~-~~~~eLs~~~Gd~i~vl~~~~~~W-w~v~~~~~~~~~g~~G~vP~~yve~~~   69 (74)
T d1wfwa_           6 SGSTMTVIKDYYA-LKENEICVSQGEVVQVLAVNQQNM-CLVYQPASDHSPAAEGWVPGSILAPFS   69 (74)
T ss_dssp             CSCEEECCSCBCC-CSSSCCCBCTTCEEEEEEECTTSE-EEEEECSCSSSSSEEEEEEGGGCCBCC
T ss_pred             CCCEEEEeEEECC-CCCCCccCccCCEEEEEEEcCCCC-EEEEeCccCCcCCeeeEEchHHeEECC
Confidence            4568999999999 899999999999999999999999 887653     4689999999999875

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=5.9e-14  Score=90.27  Aligned_cols=58  Identities=12%  Similarity=0.393  Sum_probs=51.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc----CCCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL----GDGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~----~~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..++||+|++||+|.|+++.    +.+| |.++. +++.|+||++||++++.
T Consensus        13 ~~~~~Alydy~a-~~~~ELs~~~Gd~i~vl~~~~~~~~~~W-~~g~~-~g~~G~vP~~yv~~~~~   74 (79)
T d1uhca_          13 NQVYFAVYTFKA-RNPNELSVSANQKLKILEFKDVTGNTEW-WLAEV-NGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             SCCEEESSCBCC-CSSSBCCBCTTCEEEEEESCCTTSCTTE-EEEES-SSCEEEEEGGGEEECCS
T ss_pred             CEEEEECccCCC-CCCCCccCCCCCEEEEEEeecCCCCCCE-EEEEE-CCCEEEEehhhEEECCC
Confidence            457899999999 89999999999999999864    3689 99986 89999999999998863

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=6.8e-14  Score=92.63  Aligned_cols=58  Identities=12%  Similarity=0.313  Sum_probs=51.9

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC----CCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG----DGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~----~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ +.++||+|++||+|.|+++.|    .+| |.++. +++.|+||++||+++..
T Consensus        17 ~~~~~a~~~f~a-~~~~eLs~~~Gd~v~vl~~~d~~~~~~W-w~~~~-~g~~G~~P~~yv~~~~~   78 (92)
T d1ug1a_          17 EKLFQAERNFNA-AQDLDVSLLEGDLVGVIKKKDPMGSQNR-WLIDN-GVTKGFVYSSFLKPYNP   78 (92)
T ss_dssp             GGEEEESSCCCC-CSSSCCCCCTTCEEEEEESCCTTSCSSE-EEEEC-SSSEEEEEGGGEEECCC
T ss_pred             CeEEEEcCCcCC-CCCCeEEEecccEEEEEEcccccccCCc-eEEEe-cccEEEEEhhhceecCC
Confidence            467899999999 899999999999999999864    679 99987 89999999999998754

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.1e-13  Score=92.26  Aligned_cols=58  Identities=26%  Similarity=0.495  Sum_probs=50.5

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeeccC--CCeeEEEecCCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNELG--DGWLWVTAHRTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~~--~~w~w~~~~~~~~~G~~P~~~v~~~~~  193 (235)
                      ...++|+|+|.+ ..++||+|++||+|.|+.+.+  .+| |.++. +|+.|+||++||+.+..
T Consensus         5 ~~~~rAlydy~~-~~~~ELs~~~Gd~v~Vl~~~~~~~~w-~~~~~-~g~~G~~P~~Yve~~~~   64 (93)
T d1uffa_           5 SSGYRALYPFEA-RNHDEMSFNSGDIIQVDEKTVGEPGW-LYGSF-QGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             CCCEEESSCBCC-CSSSCCCBCTTCEEEECSSCCCSSSE-EEEEE-TTEEEEEETTTEEECCS
T ss_pred             CeEEEECccCCC-CCCCCccCcCCCEEEEEEeccCCCCE-EEEEe-CCcEEEEchHHEEECCC
Confidence            357899999999 899999999999999998763  345 88887 99999999999998854

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.44  E-value=9e-15  Score=100.96  Aligned_cols=70  Identities=29%  Similarity=0.515  Sum_probs=59.8

Q ss_pred             CeEEeecCCC-CCCEEEEEEECCEEeEEEEEeeCCeE-EcCCcccCCHHHHHHHhhhCCc-----ccceeeCCcccc
Q psy13524          1 SFLVRPSDNS-PGDYSLFFHINNQIQRFRIEKKAVRY-LMGGRTFECLDAVINRYRKEQI-----VEGHTLGFPVTR   70 (235)
Q Consensus         1 ~FLvR~s~~~-~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~~~~F~sl~eLi~~y~~~~~-----~~~~~L~~p~~~   70 (235)
                      +||||+|++. ++.|+||++.++.++||+|...++.| +.+...|+||.|||+||+++++     ++.+.|.+||.|
T Consensus        34 ~FLVR~S~~~~~~~~~ls~~~~~~~~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~l~~~~~~l~~~L~~Pv~r  110 (111)
T d1fu6a_          34 TFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNSVVELINHYRNESLAQYNPKLDVKLLYPVSK  110 (111)
T ss_dssp             CCCCBSSCCSSSCCSBCEEEETTEEEECCCCCTTTCCCTTTTSCCCCTTHHHHHHHTTCSTTTCSSCCCCSCCCCCC
T ss_pred             EEEEEeccCCCCccEEEEEecCCceEEEEEEEcCCeEEECCCcccCCHHHHHHHHhhCcCCccCCCCccccCccccC
Confidence            6999999865 46799999999999999998766665 6667799999999999999874     357789999986

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.7e-13  Score=92.05  Aligned_cols=57  Identities=21%  Similarity=0.297  Sum_probs=49.3

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeE-EcC-------CcccCCHHHHHHHhhhCC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRY-LMG-------GRTFECLDAVINRYRKEQ   57 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~-~~~-------~~~F~sl~eLi~~y~~~~   57 (235)
                      +||||.|...+|.|+||++.++.|+|++|...++.| +..       ...|+||.+||+||++.+
T Consensus        38 tFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~s  102 (103)
T d2c9wa2          38 TFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMC  102 (103)
T ss_dssp             CEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHHT
T ss_pred             ceEEeccCCCCCCEEEEEEECCEEEEEEEEEcCCeEeeCCccccccCCCccCCHHHHHHHHHhhC
Confidence            699999999999999999999999999999887765 322       246999999999998753

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=6.8e-14  Score=90.43  Aligned_cols=59  Identities=25%  Similarity=0.395  Sum_probs=50.8

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc---------------CCCeeEEEec-CCCceeEEeCCcEEeccC
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL---------------GDGWLWVTAH-RTGEQGMIFRDLVEDLDE  193 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~---------------~~~w~w~~~~-~~~~~G~~P~~~v~~~~~  193 (235)
                      +..++|+|+|.+ ..+++|+|++||+|.|+.+.               +.|| |.|+. .+|+.|+||++||+.+..
T Consensus         3 G~~~raly~y~~-~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW-~~G~~~~~g~~G~FP~nYVe~i~~   77 (83)
T d1phta_           3 GYQYRALYDYKK-EREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGW-LNGYNETTGERGDFPGTYVEYIGR   77 (83)
T ss_dssp             EEEEEECSCBCC-SSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCE-EEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             CCEEEEcCccCC-CCCCcccccCCCEEEEEeccccccccccccccccCCCCe-EEEEECCCCcEeeEehhhEEEcCC
Confidence            357899999999 89999999999999999753               4689 88875 488999999999998754

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=3.2e-13  Score=84.13  Aligned_cols=57  Identities=19%  Similarity=0.304  Sum_probs=46.6

Q ss_pred             cEEEEeeccCCC-----CCCCCcccCCCCEEEEeec-cCCCeeEEEec-CCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKM-----PDTDELTFQKGDIFFVHNE-LGDGWLWVTAH-RTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~-----~~~~eL~~~~gd~i~v~~~-~~~~w~w~~~~-~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+++|.+.     .++++|+|++||+|.|++. .++|| |.++. .+|+.|+||+|||+|.
T Consensus         5 Pk~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gW-w~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_           5 PKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNW-WEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             CEEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSE-EEEEETTTTEEEEEEGGGEEEC
T ss_pred             CcEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecCCCE-EEEEECCCCCEEEEeHHHEEEc
Confidence            456778777652     4668999999999999976 46789 99986 4799999999999985

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.40  E-value=1.8e-13  Score=88.92  Aligned_cols=57  Identities=26%  Similarity=0.459  Sum_probs=48.1

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeecc-----CCCeeEEEecC---------CCceeEEeCCcEEec
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNEL-----GDGWLWVTAHR---------TGEQGMIFRDLVEDL  191 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~~-----~~~w~w~~~~~---------~~~~G~~P~~~v~~~  191 (235)
                      ..+++|+|+|.+ +.++||+|++||+|.|+.+.     ++|| |.+...         +|+.|+||+|||+.+
T Consensus        12 ~~~~~Alydy~a-~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgW-w~G~~~~~~~~~~~~~g~~G~fP~nyVe~i   82 (83)
T d1bb9a_          12 MFKVQAQHDYTA-TDTDELQLKAGDVVLVIPFQNPEEQDEGW-LMGVKESDWNQHKELEKCRGVFPENFTERV   82 (83)
T ss_dssp             CEEEEESSCBCC-SSTTBCCBCTTCEEEEECCSCGGGCCTTE-EEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             CEEEEEceeECC-CCCCEecCcCCCEEEEEEccCCCcccCCE-eEEEecCCccccccCCCCEEEEchhHeEEc
Confidence            457999999999 89999999999999999764     3679 877531         467999999999976

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.34  E-value=4.6e-13  Score=88.34  Aligned_cols=54  Identities=19%  Similarity=0.463  Sum_probs=47.4

Q ss_pred             ccEEEEeeccCCCCCCCC-------cccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCCcE
Q psy13524        133 KKRIVAILPYTKMPDTDE-------LTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRDLV  188 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~e-------L~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~~v  188 (235)
                      ...++|+|||.+ ..+++       |+|++||+|.|+++.|++| |.|++.  +++.|+||++++
T Consensus        21 ~~~vrAlydY~~-~~dd~~P~~~~~LsF~~GDii~v~~~~d~~W-W~gr~~~~~g~~G~~PS~~~   83 (96)
T d1t0ha_          21 AFAVRTNVRYSA-AQEDDVPVPGMAISFEAKDFLHVKEKFNNDW-WIGRLVKEGCEIGFIPSPVK   83 (96)
T ss_dssp             CEEEEESSCBCC-CGGGCCSSTTCBCCBCTTCEEEEEEECSSSE-EEEEESSTTCCCEEEECHHH
T ss_pred             cEEEEEeeccCC-CCCCCCccccccccCCCCCEEEEeeeeCCCc-eEEEEcCCCCCEEEecCcHH
Confidence            467999999999 66666       9999999999999999999 999874  578999999874

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.33  E-value=1.4e-13  Score=92.25  Aligned_cols=56  Identities=25%  Similarity=0.476  Sum_probs=48.0

Q ss_pred             cEEEEeeccCCCCC-----CCCcccCCCCEEEEeeccCCCeeEEEec-----CCCceeEEeCCcEEec
Q psy13524        134 KRIVAILPYTKMPD-----TDELTFQKGDIFFVHNELGDGWLWVTAH-----RTGEQGMIFRDLVEDL  191 (235)
Q Consensus       134 ~~~~a~~~~~~~~~-----~~eL~~~~gd~i~v~~~~~~~w~w~~~~-----~~~~~G~~P~~~v~~~  191 (235)
                      ..++|+|||.+ ..     ..+|+|++||+|.|+++.+++| |.++.     .+|+.|+||+|||+..
T Consensus         2 ~~vrAlydy~~-~~d~~~~~~eLsf~kGdil~V~~~~d~~W-W~~~~~~~~~~~g~~G~~Psnyv~e~   67 (96)
T d1kjwa1           2 FYIRALFDYDK-TKDCGFLSQALSFRFGDVLHVIDAGDEEW-WQARRVHSDSETDDIGFIPSKRRVER   67 (96)
T ss_dssp             EEEEESSCBCH-HHHHCCCSSBCCBCTTCEEEEEECCSSSE-EEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             EEEEEcccCcC-CcCCCCCCccceEcCCCEEEEeeeccCce-EEEEEccCCCCCCCEeEEeccceeee
Confidence            36799999998 53     3589999999999999999999 99974     3678999999999754

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.7e-12  Score=87.94  Aligned_cols=58  Identities=22%  Similarity=0.418  Sum_probs=49.3

Q ss_pred             ccEEEEeeccCCCCCCCCcccCCCCEEEEeec---cCCCeeEEEecC-------CCceeEEeCCcEEecc
Q psy13524        133 KKRIVAILPYTKMPDTDELTFQKGDIFFVHNE---LGDGWLWVTAHR-------TGEQGMIFRDLVEDLD  192 (235)
Q Consensus       133 ~~~~~a~~~~~~~~~~~eL~~~~gd~i~v~~~---~~~~w~w~~~~~-------~~~~G~~P~~~v~~~~  192 (235)
                      ...++|+|+|.+ .++++|+|++||+|.|+.+   .+.+| |.+...       +++.|+||++||+.+.
T Consensus        21 ~~~~~Alydy~~-~~~~eL~f~~Gd~i~Vl~k~~~~~~~W-W~g~~~g~~~~~~~g~~G~fP~nyV~~~~   88 (106)
T d1i1ja_          21 ISMAVALQDYMA-PDCRFLTIHRGQVVYVFSKLKGRGRLF-WGGSVQGDYYGDLAARLGYFPSSIVREDQ   88 (106)
T ss_dssp             SEEEEESSCBCC-SSTTBCCBCTTCEEEEEEEECGGGTTE-EEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             eeEEEEccccCC-CCCCCccCCCCCEEEEEEecCCCCcce-EEEEecCccccccCCcccccccccEEEcc
Confidence            357999999999 8999999999999999986   35789 888642       3568999999999764

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.4e-12  Score=90.78  Aligned_cols=57  Identities=23%  Similarity=0.570  Sum_probs=47.0

Q ss_pred             CeEEeecCCCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHH-----HhhhCCc
Q psy13524          1 SFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVIN-----RYRKEQI   58 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~-----~y~~~~~   58 (235)
                      +||||+|.+.+|.|+|||+.++.|+||+|.+++..| .....|+|+.|||+     +|+....
T Consensus        57 sFLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~g~~~-~~~~~F~sl~eLV~dgLv~~~~~~~~  118 (141)
T d1xa6a2          57 AYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHF-VGEKRFESIHDLVTDGLITLYIETKA  118 (141)
T ss_dssp             BEEEEECSSSTTCEEEEEEETTEEEECCCEESSSEE-CSSSCCCCSSHHHHHHHHHHHHHHSC
T ss_pred             eEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCEE-ECCCeECCHHHHHhhhhhhhhccccc
Confidence            699999999999999999999999999998754434 45668999999885     5665443

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.3e-12  Score=85.69  Aligned_cols=35  Identities=14%  Similarity=0.378  Sum_probs=31.5

Q ss_pred             CcCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      +..+||||+|+|++||++|.+.+ ||+||||+|++.
T Consensus         2 e~~pwyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~   37 (104)
T d1d4ta_           2 DAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESV   37 (104)
T ss_dssp             TTCTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSS
T ss_pred             CcCCccccCCCHHHHHHHHhhCCCCCeEEEEecCCC
Confidence            45899999999999999998766 899999999875

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=9.8e-12  Score=84.45  Aligned_cols=35  Identities=31%  Similarity=0.440  Sum_probs=30.4

Q ss_pred             CcCccccCCCChHHHHHhhccC--CCeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKA--GPVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~--~~g~fliR~s~~~  233 (235)
                      +..+||||+|+|++||++|.+.  .+|+||||+|++.
T Consensus         2 e~~pWy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~   38 (105)
T d1lkka_           2 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESEST   38 (105)
T ss_dssp             CCCTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSS
T ss_pred             ccCCccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCC
Confidence            4579999999999999999655  4899999999874

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1e-11  Score=84.27  Aligned_cols=36  Identities=19%  Similarity=0.479  Sum_probs=31.8

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      |+..+||||+|+|++||++|.+.+  ||+||||+|++.
T Consensus         2 h~~~~Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~   39 (105)
T d1nrva_           2 HRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSN   39 (105)
T ss_dssp             CTTSTTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSC
T ss_pred             CccCcccCCCCCHHHHHHHHhhcCCCCceEEEEeCCCC
Confidence            556899999999999999998654  899999999875

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.14  E-value=2.3e-11  Score=87.24  Aligned_cols=54  Identities=17%  Similarity=0.386  Sum_probs=47.2

Q ss_pred             cEEEEeeccCCCCCCCC-------cccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCCcEE
Q psy13524        134 KRIVAILPYTKMPDTDE-------LTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRDLVE  189 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~e-------L~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~~v~  189 (235)
                      ..++|+|||.+ ..+++       |+|++||+|.|+++.|++| |.+++.  +|+.|+||++++.
T Consensus        24 f~vra~~dy~~-~~d~~~p~~~~~LsF~kGDii~V~~~~d~~W-W~gr~~~~~g~~G~iPS~~~~   86 (145)
T d1vyva1          24 FAVKTNVSYCG-ALDEDVPVPSSAVSFDAKDFLHIKEKYNNDW-WIGRLVKEGCEIGFIPSPLRL   86 (145)
T ss_dssp             EEEEESSCBCT-TSCCSCSSTTCBCCBCTTCEEEEEEEEETTE-EEEEESSTTCCCEEEECHHHH
T ss_pred             EEEEEeeeeCC-ccCCcCCcccccccCcCCCEEEEeeccCCCc-EEEEEcCCCCceeEeCCchhh
Confidence            46999999999 66665       9999999999999999999 999863  6889999997643

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=8.2e-12  Score=84.20  Aligned_cols=36  Identities=25%  Similarity=0.405  Sum_probs=32.7

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|++.++|+||||+|++.
T Consensus         2 Le~~~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~~   37 (101)
T d1opka2           2 LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESS   37 (101)
T ss_dssp             GGGSTTEEEECCHHHHHHHGGGCCTTEEEEEECSSS
T ss_pred             cccCcccCCCCCHHHHHHHhcCCCCCeEEEEecCCC
Confidence            356899999999999999999999999999999864

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.2e-11  Score=82.69  Aligned_cols=34  Identities=26%  Similarity=0.451  Sum_probs=31.5

Q ss_pred             cCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        200 VFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       200 ~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ..|||||+|+|++||++|.+.++|+||||+|++.
T Consensus         3 ~~PWy~g~isR~eAe~~L~~~~~G~FLVR~S~~~   36 (97)
T d1jwoa_           3 LMPWFHGKISGQEAVQQLQPPEDGLFLVRESARH   36 (97)
T ss_dssp             TCTTEEESCCHHHHHHHTCSCCTTCEEEEECSSS
T ss_pred             cCCccCCCCCHHHHHHHhcCCCCCeEEEEecCCC
Confidence            4799999999999999999888999999999875

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.5e-11  Score=83.35  Aligned_cols=36  Identities=28%  Similarity=0.447  Sum_probs=31.8

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.+  +|+||||+|++.
T Consensus         3 l~~~~Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~   40 (104)
T d1g83a2           3 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETT   40 (104)
T ss_dssp             GGGSSSBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSS
T ss_pred             cccCCCcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCC
Confidence            456899999999999999998764  899999999875

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2.2e-11  Score=81.30  Aligned_cols=36  Identities=25%  Similarity=0.413  Sum_probs=32.5

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||+|+|++||++|.+.++|+||||+|++.
T Consensus         3 ~~~~~Wy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~   38 (97)
T d1r1qa_           3 IEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSS   38 (97)
T ss_dssp             CSCCTTBCTTCCHHHHHHHHHTSCTTCEEEEECSSS
T ss_pred             cccCCccCCCCCHHHHHHHHhcCCCCCEEEeecCCC
Confidence            345799999999999999999988999999999775

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.10  E-value=2.3e-11  Score=82.35  Aligned_cols=36  Identities=19%  Similarity=0.434  Sum_probs=32.6

Q ss_pred             CCCcCccccCCCChHHHHHhhccCC-CeeEEeeccCC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDS  232 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~  232 (235)
                      .|+..+||||.|+|++||++|.+.+ +|+||||+|++
T Consensus         5 ~he~~~Wy~g~i~R~eAe~lL~~~~~~G~FLVR~S~~   41 (105)
T d2fcia1           5 IHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNE   41 (105)
T ss_dssp             TTSSSCCCCSSSCSHHHHHHHHHSSSSCCEEEEECSS
T ss_pred             ccccCCCccCCCCHHHHHHHHHhCCCCCeEEEEecCC
Confidence            3677899999999999999999887 89999999965

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1.9e-11  Score=83.32  Aligned_cols=35  Identities=17%  Similarity=0.564  Sum_probs=30.9

Q ss_pred             CCcCccccCCCChHHHHHhhccCC-CeeEEeeccCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG-PVNFTISESDS  232 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~  232 (235)
                      ++..+||||+|+|++||++|.+.+ +|+||||+|++
T Consensus         3 l~~~~Wy~g~isR~eAe~lL~~~~~~G~FLVR~S~~   38 (108)
T d1luia_           3 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT   38 (108)
T ss_dssp             CTTSTTBCTTCCHHHHHHHHHHHCCTTEEEEEECCT
T ss_pred             cccCCCcCCCCCHHHHHHHHHhcCCCCeEEEEecCC
Confidence            456899999999999999997664 89999999975

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.1e-11  Score=82.06  Aligned_cols=33  Identities=27%  Similarity=0.462  Sum_probs=31.0

Q ss_pred             CccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      .|||||.|+|++||++|.+.++|+||||+|++.
T Consensus         4 ~PWy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~   36 (101)
T d1k9aa2           4 MPWFHGKITREQAERLLYPPETGLFLVRESTNY   36 (101)
T ss_dssp             CTTBCTTCCHHHHHHHTCSCCTTEEEEEECSSS
T ss_pred             CCccCCCCCHHHHHHHHcCCCCCCEEEeccCCC
Confidence            689999999999999999988999999999765

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.8e-11  Score=83.27  Aligned_cols=36  Identities=22%  Similarity=0.457  Sum_probs=31.3

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      ++..+||||+|+|++||++|.+.+  ||+||||+|++.
T Consensus         2 l~~~~Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~   39 (106)
T d1o48a_           2 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT   39 (106)
T ss_dssp             GGGSTTEEESCCHHHHHHHHCCTTCCTTCEEEEECSSS
T ss_pred             cccCCccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCC
Confidence            345799999999999999997654  999999999775

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=3.6e-11  Score=82.82  Aligned_cols=37  Identities=30%  Similarity=0.413  Sum_probs=31.6

Q ss_pred             CCCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      .++..+||||+|+|++||++|...+  +|+||||+|++.
T Consensus         8 ~l~~e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~   46 (114)
T d1blja_           8 TLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESN   46 (114)
T ss_dssp             CSCCSSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTC
T ss_pred             ccccCCCcCCCCCHHHHHHHHHhcCCCCceEEEeccCCC
Confidence            3566899999999999999986543  999999999864

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.6e-11  Score=80.77  Aligned_cols=33  Identities=27%  Similarity=0.408  Sum_probs=29.7

Q ss_pred             CccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      .|||||+|+|++||++|.+.+  +|+||||+|++.
T Consensus         2 epWy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~   36 (100)
T d1rjaa_           2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKP   36 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSS
T ss_pred             CCCcCCCCCHHHHHHHHhccCCCCCeEEeecCCCC
Confidence            589999999999999998664  899999999775

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.07  E-value=2.5e-11  Score=79.25  Aligned_cols=35  Identities=23%  Similarity=0.546  Sum_probs=30.8

Q ss_pred             CcCccccCCCChHHHHHhhccCC---CeeEEeeccCCC
Q psy13524        199 TVFDWFHPECTKNDAVDMLVKAG---PVNFTISESDST  233 (235)
Q Consensus       199 ~~~~w~~~~~~r~~ae~~l~~~~---~g~fliR~s~~~  233 (235)
                      ...+||||+|+|++||++|...+   ||+||||+|++.
T Consensus         3 ~~~pWyhg~isR~~Ae~lL~~~~~~~dG~FLvR~S~~~   40 (86)
T d1rpya_           3 SDYPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETR   40 (86)
T ss_dssp             GGSTTBCTTCCHHHHHHHHHTTGGGGTTCEEEEECSSS
T ss_pred             ccCcccCCCCCHHHHHHHHHhCCCCCCceEEEEecCCC
Confidence            45899999999999999998754   799999999764

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=3.2e-11  Score=81.49  Aligned_cols=33  Identities=33%  Similarity=0.560  Sum_probs=29.5

Q ss_pred             CccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      .|||||+|+|++||++|.+.+ ||+||||+|++.
T Consensus         3 ~PWy~g~isR~~AE~lL~~~~~~G~FLVR~S~~~   36 (103)
T d1i3za_           3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESV   36 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSS
T ss_pred             CCcccCCCCHHHHHHHHHhCCCCCeEEEEecCCC
Confidence            689999999999999997554 999999999875

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.06  E-value=2.4e-11  Score=83.31  Aligned_cols=36  Identities=8%  Similarity=0.322  Sum_probs=33.1

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|.+.++|+||||+|++.
T Consensus         8 l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~   43 (111)
T d1fu6a_           8 LQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTK   43 (111)
T ss_dssp             CSCCSSCCSSCCSHHHHHHSSSCSSCCCCCBSSCCS
T ss_pred             cCcCcCCCCCCCHHHHHHHhCcCCCCEEEEEeccCC
Confidence            567899999999999999999888999999999864

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.3e-11  Score=79.68  Aligned_cols=33  Identities=33%  Similarity=0.531  Sum_probs=29.4

Q ss_pred             CccccCCCChHHHHHhhccC-CCeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKA-GPVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~-~~g~fliR~s~~~  233 (235)
                      .|||||+|+|++||++|... .+|+||||+|++.
T Consensus         3 ~pWy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~   36 (96)
T d1jyra_           3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA   36 (96)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSS
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCeEEEEecCCC
Confidence            69999999999999999654 5999999999874

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.5e-11  Score=81.57  Aligned_cols=34  Identities=32%  Similarity=0.549  Sum_probs=30.8

Q ss_pred             cCccccCCCChHHHHHhhccCC-CeeEEeeccCCC
Q psy13524        200 VFDWFHPECTKNDAVDMLVKAG-PVNFTISESDST  233 (235)
Q Consensus       200 ~~~w~~~~~~r~~ae~~l~~~~-~g~fliR~s~~~  233 (235)
                      ..+||||.|+|++||++|.+.+ +|+||||+|.+.
T Consensus         2 ~~~Wy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~   36 (109)
T d2shpa2           2 SRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSN   36 (109)
T ss_dssp             CSTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSS
T ss_pred             CCccccCCCCHHHHHHHHhhCCCCCeEEEEecCCC
Confidence            3789999999999999998877 899999999765

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=6.6e-11  Score=79.95  Aligned_cols=36  Identities=25%  Similarity=0.326  Sum_probs=32.6

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||+|+|++||++|.+.++|+||||+|++.
T Consensus        12 l~~~~Wy~g~i~R~~Ae~~L~~~~~GtFLVR~S~~~   47 (103)
T d2c9wa2          12 LGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHS   47 (103)
T ss_dssp             HHHTSCBCTTCCHHHHHHHHTTSCTTCEEEEECCST
T ss_pred             HhhCCCcCCCCCHHHHHHHhcCCCCCceEEeccCCC
Confidence            345799999999999999999888999999999875

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.7e-11  Score=80.27  Aligned_cols=33  Identities=27%  Similarity=0.462  Sum_probs=29.0

Q ss_pred             CccccCCCChHHHHHhhccC--CCeeEEeeccCCC
Q psy13524        201 FDWFHPECTKNDAVDMLVKA--GPVNFTISESDST  233 (235)
Q Consensus       201 ~~w~~~~~~r~~ae~~l~~~--~~g~fliR~s~~~  233 (235)
                      .+||||+|+|++||++|...  .+|+||||+|++.
T Consensus         1 e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~   35 (103)
T d1qcfa2           1 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETT   35 (103)
T ss_dssp             STTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSS
T ss_pred             CCccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCC
Confidence            37999999999999999654  4999999999875

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.8e-11  Score=82.49  Aligned_cols=36  Identities=19%  Similarity=0.420  Sum_probs=31.9

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      |+.++||||+|+|++||++|.+.+  ||+||||+|++.
T Consensus         7 h~~~~Wy~g~isR~~Ae~lL~~~g~~dG~FLvR~S~~~   44 (113)
T d2qmsa1           7 HRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRN   44 (113)
T ss_dssp             TTCCTTEEEEBCHHHHHHHHHHTTCCTTEEEEEECSSC
T ss_pred             hcCCCccCCCCCHHHHHHHHhccCCCCccEEEEeccCC
Confidence            566899999999999999998654  899999999875

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.02  E-value=3.6e-11  Score=81.87  Aligned_cols=37  Identities=19%  Similarity=0.236  Sum_probs=32.1

Q ss_pred             CCCCcCccccCCCChHHHHHhhccCCCeeEEeeccCC
Q psy13524        196 DPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDS  232 (235)
Q Consensus       196 ~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~  232 (235)
                      +.++..+||+|.|+|++||++|.+..+|+||||+|+.
T Consensus         4 p~~~~~~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~   40 (107)
T d1qada_           4 PHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSK   40 (107)
T ss_dssp             GGGSGGGTEEEECCHHHHHHHHTTCCTTEEEEEEC--
T ss_pred             CccCCCcccCCCCCHHHHHHHHcCCCCCcEEEEecCC
Confidence            3366799999999999999999998899999999954

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=6.4e-11  Score=82.54  Aligned_cols=35  Identities=17%  Similarity=0.393  Sum_probs=31.3

Q ss_pred             CCcCccccCCCChHHHHHhhccCC--CeeEEeeccCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDS  232 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~  232 (235)
                      |+..+||||+|+|++||++|.+.+  +|+||||+|++
T Consensus        26 ~e~~pWyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~   62 (124)
T d2oq1a2          26 HERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKE   62 (124)
T ss_dssp             GGGSTTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSS
T ss_pred             ccCCCCccCCCCHHHHHHHHhhcCCCCceEEeEecCC
Confidence            567899999999999999998764  89999999976

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=3.9e-11  Score=82.33  Aligned_cols=36  Identities=14%  Similarity=0.038  Sum_probs=32.7

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||+|+|++||++|.+..+|+||||+|++.
T Consensus         8 l~~~~Wy~g~isR~~Ae~lL~~~~~GtFLVR~S~~~   43 (112)
T d2izva2           8 INNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQE   43 (112)
T ss_dssp             HHHCTTEEEECCHHHHHHHHTTCCTTEEEEEECSST
T ss_pred             hccCCCcCCCCCHHHHHHHHccCCCCcEEEeecCCC
Confidence            446899999999999999999888999999999864

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=8.3e-11  Score=82.11  Aligned_cols=37  Identities=16%  Similarity=0.461  Sum_probs=31.7

Q ss_pred             CCCcCccccCCCChHHHHHhhccCC--CeeEEeeccCCC
Q psy13524        197 PNTVFDWFHPECTKNDAVDMLVKAG--PVNFTISESDST  233 (235)
Q Consensus       197 p~~~~~w~~~~~~r~~ae~~l~~~~--~g~fliR~s~~~  233 (235)
                      .|+..+||||+|+|++||++|...+  +|+||||+|++.
T Consensus        25 ~he~~pWyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~   63 (125)
T d1a81a2          25 AHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNN   63 (125)
T ss_dssp             SGGGSTTEEEECCHHHHHHHHHSSCCCTTCEEEEECSSS
T ss_pred             ccccCCccCCCCCHHHHHHHHHhcCCCCceEEEEecCCC
Confidence            3677899999999999999996554  899999998763

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.96  E-value=2.3e-10  Score=80.51  Aligned_cols=53  Identities=15%  Similarity=0.376  Sum_probs=45.7

Q ss_pred             cEEEEeeccCCCCCCCC-------cccCCCCEEEEeeccCCCeeEEEecC--CCceeEEeCCcE
Q psy13524        134 KRIVAILPYTKMPDTDE-------LTFQKGDIFFVHNELGDGWLWVTAHR--TGEQGMIFRDLV  188 (235)
Q Consensus       134 ~~~~a~~~~~~~~~~~e-------L~~~~gd~i~v~~~~~~~w~w~~~~~--~~~~G~~P~~~v  188 (235)
                      ..++|+|+|.+ ..+++       |+|++||+|.|+++.|++| |.++..  ++..|+||++++
T Consensus        24 ~~vra~~~Y~~-~~d~~~P~~~~~LsF~~gdil~v~~~~d~~W-W~~r~~~~~~~~G~iPs~~~   85 (136)
T d1vyua1          24 FAVRTNVSYCG-VLDEECPVQGSGVNFEAKDFLHIKEKYSNDW-WIGRLVKEGGDIAFIPSPQR   85 (136)
T ss_dssp             EEEEESSCEEG-GGCTTCSSTTCBCEECTTCEEEEEEECSSSE-EEEEESSTTCCCEEEECHHH
T ss_pred             EEEEEeeccCC-CCCCCCcccCcccCCCCCCEEEEEeccCCCc-EEEEeccCCCceeccCchHH
Confidence            56899999999 55454       9999999999999999999 999864  567899999874

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=2.2e-10  Score=77.68  Aligned_cols=34  Identities=32%  Similarity=0.490  Sum_probs=31.5

Q ss_pred             cCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        200 VFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       200 ~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ..+||||.|+|++||++|.+..+|+||||+|++.
T Consensus         8 ~~pWy~g~isR~eAe~lL~~~~~G~FLvR~S~~~   41 (106)
T d2cs0a1           8 VPEWFHGAISREDAENLLESQPLGSFLIRVSHSH   41 (106)
T ss_dssp             CCSSBCSSCCHHHHHHHHHTSCTTCEEEEECSSS
T ss_pred             CCCCccCCCCHHHHHHHHcCCCCCcEEEEecCCC
Confidence            4789999999999999999988999999999865

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.7e-10  Score=77.86  Aligned_cols=34  Identities=26%  Similarity=0.383  Sum_probs=30.1

Q ss_pred             CCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        198 NTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       198 ~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      ++..+||||.|+|++||++|+  .+|+||||+|++.
T Consensus         4 l~~~pWyhG~i~R~~Ae~lL~--~~G~FLVR~S~~~   37 (104)
T d1mila_           4 LRGEPWFHGKLSRREAEALLQ--LNGDFLVRESTTT   37 (104)
T ss_dssp             TTTCTTBCSSCCHHHHHTTCC--STTEEEEEECCSS
T ss_pred             cccCCCcCCCCCHHHHHHHHh--cCCcEEEEecCCC
Confidence            556899999999999999995  4899999998765

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.3e-10  Score=81.10  Aligned_cols=37  Identities=19%  Similarity=0.210  Sum_probs=32.0

Q ss_pred             CCCCcCccccCCCChHHHHHhhccCCCeeEEeeccCCC
Q psy13524        196 DPNTVFDWFHPECTKNDAVDMLVKAGPVNFTISESDST  233 (235)
Q Consensus       196 ~p~~~~~w~~~~~~r~~ae~~l~~~~~g~fliR~s~~~  233 (235)
                      .|+...+||||.|+|++||++|.+. ||+||||+|++.
T Consensus        30 ~~~~~~~wyhG~isR~eAe~lL~~~-dGsFLVR~S~~~   66 (141)
T d1xa6a2          30 RPKYYGREFHGIISREQADELLGGV-EGAYILRESQRQ   66 (141)
T ss_dssp             SSCSSCSSEEEECCHHHHHHHHCSC-TTBEEEEECSSS
T ss_pred             CcccccceeeccCCHHHHHHHHcCC-CCeEEEEecCCC
Confidence            4566679999999999999999764 899999999864

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=98.29  E-value=2e-07  Score=65.00  Aligned_cols=51  Identities=12%  Similarity=0.333  Sum_probs=41.5

Q ss_pred             CeEEeecCCCCCCEEEEEEEC---CEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhC
Q psy13524          1 SFLVRPSDNSPGDYSLFFHIN---NQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKE   56 (235)
Q Consensus         1 ~FLvR~s~~~~g~~~lsv~~~---~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~   56 (235)
                      +||||.|++.+|.|+||++..   +.|+||+|...+     ++..|.++++++..|...
T Consensus        32 tFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~-----~~~~~~sl~d~l~~~~~~   85 (131)
T d1uura3          32 TFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPND-----TAAAKKTFPDFLSEHSQF   85 (131)
T ss_dssp             CEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGG-----SBTTTBCHHHHHTTCTTC
T ss_pred             eEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecC-----CCcccccHHHHHHhHHHh
Confidence            699999999999999999974   579999996643     345688999988776544

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=8.5e-08  Score=67.34  Aligned_cols=56  Identities=16%  Similarity=0.218  Sum_probs=46.4

Q ss_pred             CeEEeecC-CCCCCEEEEEEECCEEeEEEEEeeCCeEEcCCcccCCHHHHHHHhhhCC
Q psy13524          1 SFLVRPSD-NSPGDYSLFFHINNQIQRFRIEKKAVRYLMGGRTFECLDAVINRYRKEQ   57 (235)
Q Consensus         1 ~FLvR~s~-~~~g~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~F~sl~eLi~~y~~~~   57 (235)
                      +||||.|+ +.+|.|+||++..+.+.|++|...+ .|.....+|.|++|+|.+|+...
T Consensus        30 tFLvR~S~~s~~G~~tis~~~~~~~~~~~i~~~~-p~t~~dl~~~sL~dlI~~y~~~~   86 (141)
T d1bg1a3          30 TFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVE-PYTKQQLNNMSFAEIIMGYKIMD   86 (141)
T ss_dssp             CBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCC-CBCGGGGTSSCHHHHTTSCCCBC
T ss_pred             eEEEEecCCccCCCEEEEEEecCcCCceEEeecC-CeecCccccCCHHHHHHhhhhhc
Confidence            69999998 5689999999999999999996432 25566678999999999998654

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0024  Score=43.46  Aligned_cols=67  Identities=25%  Similarity=0.245  Sum_probs=46.9

Q ss_pred             ccceeeCCccccCCCceeec------ceEEEEEee-cCeeEee-eEEEcchhhhhhccccCCchhhcccccCCCCC
Q psy13524         59 VEGHTLGFPVTRINLGIFIP------SAIFRVTAV-CGDFYIG-GRQFDSLSDLISYYSSCSDLLKRERLAHPCPP  126 (235)
Q Consensus        59 ~~~~~L~~p~~~~~~~~~l~------~~~~~l~~~-~g~~~~g-~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~  126 (235)
                      ..+..|++........+.|.      ..|++|.+. .|.+.+. +..|+++.+||++|+..+.++. +.+..|.+.
T Consensus        27 ~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~~Y~~~~~gl~-~~L~~P~~~  101 (129)
T d1a81a1          27 SDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLV-CLLKKPFNR  101 (129)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTCCTTSS-SCCCEECCC
T ss_pred             CCccEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCHHHHHHHHhhCCCCCc-ccCCCCCCC
Confidence            34566666544423334443      289999866 5677776 7789999999999998776665 677777654

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0036  Score=42.63  Aligned_cols=69  Identities=25%  Similarity=0.346  Sum_probs=47.9

Q ss_pred             ccceeeCCccccCCCceeec------ceEEEEEee-cCeeEee-eEEEcchhhhhhccccCCchhhcccccCCCCCCC
Q psy13524         59 VEGHTLGFPVTRINLGIFIP------SAIFRVTAV-CGDFYIG-GRQFDSLSDLISYYSSCSDLLKRERLAHPCPPPE  128 (235)
Q Consensus        59 ~~~~~L~~p~~~~~~~~~l~------~~~~~l~~~-~g~~~~g-~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~~~~  128 (235)
                      ..+..|++........+.|.      ..|++|.+. .|.+.+. +..|+++.+||++|+..+..+. +.+..|++.+.
T Consensus        28 ~~G~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~~Y~~~~~gL~-~~L~~P~~r~~  104 (130)
T d2oq1a1          28 ADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGLP-CNLRKPCNRPS  104 (130)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHCCTTSS-SCCCSBCCCCT
T ss_pred             CCceEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCHHHHHHHHhhCCCCCC-ccCCccCCCCC
Confidence            34566666654422334443      289999776 5677776 6789999999999988776665 77888876543

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0034  Score=38.05  Aligned_cols=41  Identities=20%  Similarity=0.331  Sum_probs=36.9

Q ss_pred             CCCCcccCCCCEEEEeeccCCCeeEEEecCCCceeEEeCCcE
Q psy13524        147 DTDELTFQKGDIFFVHNELGDGWLWVTAHRTGEQGMIFRDLV  188 (235)
Q Consensus       147 ~~~eL~~~~gd~i~v~~~~~~~w~w~~~~~~~~~G~~P~~~v  188 (235)
                      +..+|+++.||.|.|+...+.+- |.+|+..|+-|+++..++
T Consensus        35 g~~dL~vk~GE~ldVIr~t~~~k-~LcRN~~GkYGYV~~~~l   75 (77)
T d1ri9a_          35 GTRDLQVKPGESLEVIQTTDDTK-VLCRNEEGKYGYVLRSYL   75 (77)
T ss_dssp             CTTBCCCCTTCBCEEEEESSSSE-EEEEETTTEEEEEEGGGS
T ss_pred             CcccCCcCCCCEEEEEEeCCCCe-EEEEcCCCcEEEEEeeee
Confidence            45689999999999999988888 999999999999998765

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.032  Score=36.18  Aligned_cols=34  Identities=26%  Similarity=0.463  Sum_probs=28.5

Q ss_pred             ceEEEEEeecCeeEee-eEEEcchhhhhhccccCC
Q psy13524         79 SAIFRVTAVCGDFYIG-GRQFDSLSDLISYYSSCS  112 (235)
Q Consensus        79 ~~~~~l~~~~g~~~~g-~~~f~~l~~lv~~~~~~~  112 (235)
                      ..|+.+....+.+.+. ...|+++.+||++|+..+
T Consensus        57 ~~h~~i~~~~~~~~~~~~~~F~sl~~LV~~y~~~~   91 (108)
T d2shpa3          57 VTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNP   91 (108)
T ss_dssp             EEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSC
T ss_pred             eeeEEEEeCCCceEeCCCcccCCHHHHHHHHhhCC
Confidence            3688888888888876 789999999999998754

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.74  E-value=0.24  Score=31.73  Aligned_cols=32  Identities=31%  Similarity=0.550  Sum_probs=22.1

Q ss_pred             EeeeEEEcchhhhhhccccCCchhhcccccCCCC
Q psy13524         92 YIGGRQFDSLSDLISYYSSCSDLLKRERLAHPCP  125 (235)
Q Consensus        92 ~~g~~~f~~l~~lv~~~~~~~~~~~~~~~~~p~~  125 (235)
                      ..++..|+++.+||++|+.+..  ..+.+..|++
T Consensus        77 ~~~~~~F~sl~~LV~~y~~~~l--~~~~L~~P~~  108 (109)
T d2eyva1          77 RIGDQEFDSLPALLEFYKIHYL--DTTTLIEPVS  108 (109)
T ss_dssp             EETTEEESSHHHHHHHSSSSCS--SSSCCCSBCC
T ss_pred             EeCCeeeCCHHHHHHHHhhCcC--CCCccCCcCC
Confidence            3446789999999999987543  2245555543